LOCUS       DATDZU010000001         3159 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1426081, whole genome shotgun sequence.
ACCESSION   DATDZU010000001 DATDZU010000000
VERSION     DATDZU010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3159
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1426081"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VJJ79_00005"
     CDS             <1..418
                     /locus_tag="VJJ79_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22143.1"
                     /translation="PNEDVYIARLGVRSDAAGRYQFLHSTYIGAKTAGYFPDGRFCPL
                     EQDEAALYLAEQRGVSSKDIRDAAGSNSDSDEWQDIFDEIAPEWASIPMSEDACESNS
                     ACSRHGCDNGEGCYGQGAKDANNLVAVFNTCWDAHR"
     gene            465..1238
                     /locus_tag="VJJ79_00010"
     CDS             465..1238
                     /locus_tag="VJJ79_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22144.1"
                     /translation="MTRPLRKWFWKTLAIDIFLLAFLFVIGVFMKRKLVVFFQLIDGY
                     QGQALLLESGLANQSLDALVQFEHLIGEMNSLVYLTLFLVAIIVPIFVYLVITFSQSL
                     QISFIHGMIHKKYLLKTFLLGLPVLVLLFFSWDIIVGSLGEMFTSTNALYMSIILVFL
                     FVLLAYMWYVFACVLYAGRVRDHFSVLYKKFYIIFPLFLAYVIVYFFLFALVAWVAIR
                     YLTESFVGSEVPFMVITAVVLLVVQQIVRYIFVTRVAQS"
     gene            1266..2330
                     /locus_tag="VJJ79_00015"
     CDS             1266..2330
                     /locus_tag="VJJ79_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013194683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HLC22145.1"
                     /translation="MPKVAVLKTTPETVLEDYKKLMHLAEYKKFISKKNDTILKLNLS
                     WSLYYPACSTQPWQLEGVLKTLVDDGYKNIFPVENETVVTDVHTGVKLNKWLPVLKRY
                     GQMFVPLTDVEWVRYQPKAEMLALHEIFPQGNLIPKMFIGKNVVHFPTMKTHGHTTIT
                     GAMKNAFGGLITKKRHHCHKKIHEVLVDLLAIQKEIHPCIFAVMDGTVAGDGAGPRTM
                     IPRVANYLIAGADQVAVDAVAAKIMGFDPMKIKFINLAHDQGLGIGDTDQIDIVGEDV
                     SRVNLGFTTQKSPVIFWDQVFRKGPMSFIEPYLFHTKLFHLAIFGSEFYHDHLWYPTV
                     GKGHIRRFEKTGWGQLWKRY"
     gene            2595..2685
                     /locus_tag="VJJ79_00020"
     tRNA            join(2595..2630,2651..2685)
                     /locus_tag="VJJ79_00020"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2627..2629,aa:His,seq:gtg)
     gene            2694..>3159
                     /locus_tag="VJJ79_00025"
     CDS             2694..>3159
                     /locus_tag="VJJ79_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016201596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HLC22146.1"
                     /translation="MTLELAKGTRDLPPEESILLDEVVSVLKRNFILFGFNPLETPIL
                     ERFDTLASKYAGGAEILKETFQLTDQGKRALALRYDLTVPFARFVAMNPQLKLPFKRY
                     QIGRVFRDGPVSTNRLREFTQCDCDIVGTKSLVADAECVQLYLKCFSELGLDV"
BASE COUNT          805 a          621 c          762 g          971 t
ORIGIN      
        1 tccgaatgaa gatgtttata ttgcacggct cggagttagg agtgatgcag ctggacgata
       61 ccaattcctc catagcacgt acattggtgc taagactgca ggttatttcc cagatggacg
      121 tttttgccct ctggaacaag acgaagctgc attgtacctt gcagaacaaa gaggcgtgag
      181 cagcaaggat attcgggatg ctgcgggaag caatagtgat agcgacgaat ggcaggatat
      241 atttgacgag attgcaccgg aatgggcttc gattcctatg tccgaagacg catgtgagag
      301 caatagtgct tgcagcagac atgggtgtga caatggagaa ggatgttatg gccagggtgc
      361 caaggatgca aataatcttg tcgctgtttt taacacgtgc tgggatgcgc accgctagag
      421 gcgttactga aattatataa actctttttt gtttcttgca atgcatgact cggcccttgc
      481 gaaagtggtt ctggaaaacg ctggcaatag atatattcct tcttgcattt ctctttgtca
      541 tcggcgtgtt catgaaacga aaactggttg ttttttttca actgattgac ggataccagg
      601 gacaggctct gcttttggaa tccgggcttg caaatcaatc tcttgatgca ctcgtgcagt
      661 tcgagcacct aatcggagaa atgaactcgc tagtttacct gacgctgttt cttgttgcga
      721 ttatcgttcc aatttttgta tacctcgtga ttactttttc acaatcgttg cagattagtt
      781 ttattcatgg gatgattcat aaaaaatatc ttttgaagac gtttcttctc ggtcttcccg
      841 tgctcgtgct attgtttttt tcgtgggata ttatcgtcgg gagtctcggc gagatgttca
      901 ccagcaccaa tgcgttgtac atgtctatta ttcttgtttt tctatttgtt cttttagcgt
      961 atatgtggta cgtgtttgcg tgtgttctgt atgctggacg tgtgcgtgat catttctctg
     1021 tgctatacaa aaagttctac attatttttc ctctgtttct cgcctatgtt attgtctatt
     1081 tttttctgtt tgcgcttgtt gcatgggttg cgatacgcta tctgacagaa tcttttgttg
     1141 gatctgaagt gccgttcatg gttattacag cagttgttct tctcgtcgtg cagcaaatcg
     1201 ttcgatatat ttttgttaca cgagttgcac aatcttaata agaaatagca cattttcctt
     1261 cagttatgcc caaggttgcc gtccttaaaa caacaccaga aactgttcta gaggattaca
     1321 aaaagcttat gcatctagcg gagtataaaa aatttatttc aaaaaaaaac gatacgattc
     1381 tcaagctgaa tctgtcatgg agcttgtact atcctgcctg ctcgacacag ccgtggcaat
     1441 tggaaggtgt tctcaaaact ctcgtcgatg acggatataa aaatattttt cctgtagaaa
     1501 atgaaactgt cgtcaccgat gtgcatacag gtgtgaagct caataagtgg ctgcctgttc
     1561 tcaagcgtta tggacagatg tttgttccgt tgacagatgt tgaatgggtg cgctatcagc
     1621 caaaagcaga gatgctcgct ctccacgaaa tttttcccca agggaattta ataccaaaaa
     1681 tgtttattgg gaaaaatgtc gttcattttc cgacgatgaa gacgcacggg cacacaacaa
     1741 ttactggtgc gatgaagaat gcgttcggcg gtttaattac aaaaaaacgg caccattgcc
     1801 ataaaaaaat tcatgaagtg cttgttgatc ttcttgcgat ccaaaaagaa atacacccct
     1861 gcatttttgc tgtgatggat gggacggtgg caggtgatgg tgcaggacca cgaacaatga
     1921 ttccgcgcgt ggctaattat ctcattgctg gcgctgacca agttgctgtc gatgctgttg
     1981 ctgcaaaaat tatggggttt gatccgatga aaattaagtt cattaacctc gcgcatgatc
     2041 aggggcttgg tatcggtgat acggatcaga tagatattgt cggcgaggat gtttctcgtg
     2101 tgaacctcgg ctttacgacg cagaaaagtc cagtcatatt ctgggatcag gtgtttagga
     2161 aaggacctat gtcgtttatt gagccatatt tattccatac aaaactgttc caccttgcca
     2221 tctttggttc ggaattttac catgatcatc tctggtatcc gacggtgggg aaggggcata
     2281 ttcggcggtt cgagaagacg ggatgggggc agttgtggaa acgatactga ccttaaaaaa
     2341 tagccttaaa ctattgcttc cctaaaatgg tttctgtaac attctttaaa atatttcaaa
     2401 aaatccgaaa acctttcgag aggatatttt atgtgcaaag ccacaccgag agaaaccttt
     2461 atataggata gtacgctcct aaaatacacg atgacaagag ttgattgtat tcattgactt
     2521 gaattctgat tttgatagtc ctcttgctcg tagaaacatt tttaaggttc tagaaagcac
     2581 tctcggaggt tatggtgggt atagtttagt ggtagaatgc gggactgtgg cttcgctttg
     2641 cgatgcagaa atcctgcgac gcgagttcga ttctcgctat ccaccctttt tttatgacac
     2701 ttgaacttgc aaaaggaaca agggatcttc cgccggaaga gtctatcctc ctcgatgaag
     2761 tagtctctgt gctgaagcga aactttatac tttttgggtt taatcctctc gaaactccca
     2821 tcctcgaacg ctttgatacg ctggcatcga agtacgcggg cggtgcagaa attttgaaag
     2881 aaacgttcca gctgacggac cagggaaaac gagcgctggc actgcgatac gatctgacgg
     2941 ttccatttgc gcgctttgtt gcgatgaatc cgcagttgaa gctgccgttt aagcgctacc
     3001 agattgggcg agtgttccgt gacggaccgg tgagcacgaa tcgtttacgg gagttcacgc
     3061 agtgcgattg tgatatagtt ggcacgaaaa gccttgttgc ggatgcagag tgcgtgcagt
     3121 tgtatttgaa atgtttttcg gaacttggac ttgatgttg
//
LOCUS       DATDZU010000002         3810 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2061106, whole genome shotgun sequence.
ACCESSION   DATDZU010000002 DATDZU010000000
VERSION     DATDZU010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2061106"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..3347)
                     /gene="rpoC"
                     /locus_tag="VJJ79_00030"
                     /pseudo
     CDS             complement(1..3347)
                     /gene="rpoC"
                     /locus_tag="VJJ79_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012526294.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
     gene            complement(3350..>3810)
                     /locus_tag="VJJ79_00035"
     CDS             complement(3350..>3810)
                     /locus_tag="VJJ79_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012829114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HLC22147.1"
                     /translation="KEIFEALNMATLPSTGQHILFDGRTGEAFAQDVTVGTMYYLKLN
                     HLVEDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYALQEFLTVK
                     SDDVAGRTRMYEAIVKGENVLEPGLPESFNVLTRELQSLCLDVELQEEES"
BASE COUNT         1088 a          875 c          656 g         1191 t
ORIGIN      
        1 atgtcttttg tttttgttgt ttcacgaggt attttggcta aaatatctcc aggagcaatt
       61 tcatctccct cattcaccaa aatattggct ccttctggaa gaagataacg cgcccaacct
      121 cgtccccctg ccaattgcag agtttgtcct tcgctatctt taatagaaat ccggggacga
      181 ttatctggat ctttagtttg aattgtcact ctatgagaaa gcccggttac atcatcacgc
      241 tgttctttga aagtaacacc ttcaataaga tctccatatt taacctgtcc acctatttct
      301 gtaacaatgg ggtttgtgta aggatcccac tccgcaagaa gtgttttttc ttctatctct
      361 tgtccatctt gaacaagaag ttttgcaccg tagataacag aatatttttc tttttctcta
      421 ccatctttat caataacgat aagttctccg ttcctattca taaccgtaca ggtaccttca
      481 cggttcttaa caaccttcaa ctgcgagagc ttcacaatac ctttatatct attttcaatg
      541 gtgctctgtt cagctcgacg gcttgctgta ccaccaatat ggaaggttct catggtaagt
      601 tgcgtgcccg gttctccaat ggactgggcc gcaataatac caacagactc acctatatta
      661 acaacttgtc ctcgggcaag atctcgaccg taacaaacgg tacacatacc ccattcaagt
      721 tcacaggtaa gcggtgaacg aaccttaact ttttctatac ctgcatcaag aactttttga
      781 accttaccct catcaatttc ctcacctgcc ttaacaagca cttcattgtt gaaagggtca
      841 ataatatctt ccagcgccat tcttcctaga attctgtctt cgagtggctg aataatttct
      901 ccaccttcaa taagaggagt gacttcaatg cccccttttg tgccacaatc ttttttggtg
      961 atcatgacat cttgcaccac atcaacaaga cggcgagtca aataaccaga gttagcagtt
     1021 ttaagtgcag tatcagccaa accttttctg gctccgtgcg ttgagataaa gtactgcaac
     1081 atagacaaac cctcacggaa gttagctgta attggtgttt caatgatttc accagaaggc
     1141 tttgtcataa gacctctcat acccgccaac tggcgaattt gagcagcact acccctggca
     1201 cctgagtcag ccataataaa aatagggtta aaacttgctg actccttctt ctcacctttt
     1261 tgattggtca caatctctgt acctaatttt ttcatcattt cttcagcaac tgtttctgtt
     1321 gtatgcgccc aaatatcaac aactttattg taacgctcac catctgtaat gagcccttct
     1381 tcatactgtt gttgaatgtc taaaacctct ttttgagcct tctctaaaaa ttcctttttc
     1441 ctttccggaa tttgaatatg agaaatagaa attgaaatag ccgcttttgt tgcagaattg
     1501 taaccaagcg ttctgagctt atctgccata ataactgttg ttttatttcc gcagagtcga
     1561 tagcacaggt caacaacatc agccagactc ttcttatcca taaccttgtt gtattttgag
     1621 aaaggtattt gtgaaggtac aatttctttt aagagaagtc ttccaactgt tgtttcaata
     1681 atcttgccat caatgcgaac ttttattttt gcctgtgttt caatttgatc gatggaattc
     1741 atataaattg cttcatcagg agatccaaaa acatgcccct caccacgagc aaatagtttt
     1801 tctcgggtta ggaagtaaat acctaaaacg atatcctgag taggcataat aatgggttta
     1861 ccatgagcag gtgaaagaat attgtttgtc gacatcataa gaacacgagc ttctatctgg
     1921 gcttctacag agagaggtat gtgcaccgcc atttggtcac catcgaagtc agcgttaaaa
     1981 gctgtacata ccaatgggtg aagttgaata gcctttcctt ctgtaaggac cggttcaaaa
     2041 gcttgaatac ctaaacggtg tagtgttgga gcacggttga gaagtaccgg gtgttccgaa
     2101 gtaacttcat ccaaaatatc ccatacaacc ggatcctgat catccaccaa ttttttggct
     2161 tctttaattg ttgttgcata acctttttct tcaagtttat taaaaataaa tggtttaaaa
     2221 agctctaagg ccataatctt aggtaatccg cactgatgaa gtttaagttc agggccaaca
     2281 acaataacgc ttcttcctta ataatcgaca cgcttaccta acaagttctg acggaaacgt
     2341 ccttgttttc ctttaagcat atctgaaaga gagcgaagag gacggcggtt agggcctgta
     2401 aaaactttac cacggcgacc attatcaaaa agtgcatcca ctgcttcttg aagcattctc
     2461 ttttcattgc gaataatgat atctggagca tttaatttta ggagtctttt gagacgatta
     2521 tttctattaa taacccgtcg gtataaatca ttcaaatcac tcgtagcaaa ccggccacct
     2581 tcaagtggaa caaggggtct taaatcgggt ggaataacag ggataacatc aagcatcatc
     2641 cagtaaggtt tatttcctga tttctgaaaa ccttcgagaa cagaaagtct tttagaaact
     2701 ttttttcgat tggcaacact cttagtttct ttcatttctt cgcgcaattc tttgacgagc
     2761 ttatcaacat caagtttctt caataactca atcatagcct cgccacccat tacagctgta
     2821 aaggcacccc caaatttttg gagcgcttca taatattctt cctcagaaag aacttgtttt
     2881 tcttcaagat cactaccacc tggatcgagc acaatataag attcactata aagaactttt
     2941 tcaacatttt ttaaaggtaa atctaaaatg gttccaattc ttgatggcaa acttcgtaaa
     3001 aaccaaatat gagctacagg agtagcaagt tcaatatgac ctagtcgctc tcttcttact
     3061 ttagattgta taacctcaac accacatttt tcacacacca ctccgcggtg tttcatacgt
     3121 ttatattttc cgcaattaca ttcgtaatcc ttgaccggac caaatatttt tgcacaaaac
     3181 aaaccatctc gctcgggttt aaatgttctg tagttaattg tttcaggctt cttcacttct
     3241 ccatgagacc aagaacggat cttttcaggt gaagcaagtt gaattttaag cgccttaata
     3301 gtaagtggat ccctaggttt atcaaaaaat tgtaagaggt ccttcatgat taactctcct
     3361 cctcttgaag ttcaacatcg agacacaaac tctgaagttc acgcgtaaga acattaaagg
     3421 actcaggtaa tccaggttca agcacgttct cacccttcac aatggcttca tacatacgcg
     3481 ttcttcctgc cacatcgtca gatttaacag taagaaactc ttgaagagca taggcagccc
     3541 cataggcctc cagagcccac acttccattt cccctaaacg ttgtcccccg aattgtgcct
     3601 ttccaccaag aggttgttgt gtcaccaatg agtaaggtcc aatagaacga gcgtgaattt
     3661 tatcttcaac caagtgattc aatttcaagt aatacatggt tcccaccgta acatcttggg
     3721 caaaagcttc tcctgtacgg ccatcaaaaa gaatgtgctg tcccgttgaa ggaagagtcg
     3781 ccatattgag agcctcaaaa atttcttttt
//
LOCUS       DATDZU010000003         6660 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1255751, whole genome shotgun sequence.
ACCESSION   DATDZU010000003 DATDZU010000000
VERSION     DATDZU010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6660
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255751"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VJJ79_00040"
     CDS             <1..367
                     /locus_tag="VJJ79_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22148.1"
                     /translation="YWVAALILLFFIYYFVQKIKKGKKFEKVAAKATEIVTVATPELS
                     RRQHDVLQTLRDVEKEIVRFVLQQGGSTTQSKIYYGTGIPKTSLSRALQSLTVKNILK
                     ITPFGKMKRVEFSDWFKQK"
     gene            537..3137
                     /locus_tag="VJJ79_00045"
     CDS             537..3137
                     /locus_tag="VJJ79_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22149.1"
                     /translation="MRKLASLILFTVLVISVLAYNGLGFVLNDVLQGPQYPFNQATFQ
                     CSSTLFGDYNNDGQRNFTDTQILLHSINTPAVVINGSVNGILCDPLTLDVNLDGVVNI
                     ADANLYQGYVVSGFPQCGDGIDNDNDTLIDFPTDLGCTSFIDLTESNTTQTYAPQVTI
                     VNPLNNTNIANGTSVTLRASTFDLDEPGNAVPSQNIQWTSSLQGVLGNGTTLNIILTL
                     GTHILTVQATDSTGLSSTATIQVSVINPFTVTASASPASGSTPLNSVTTCTANQGSAP
                     YRFSIYYSDAGTISFVAQNSNVLTHNRTYYNPGTVTVTCHAVDNTGNTVSGSTQVTVT
                     GTSIVNNAPDVNITTPTNNSQFTQGNSVTFTAVSYDVEDGTLQSSNMLWASNIDGIIG
                     TGHSFSTSSLSLGTHAIVVIGTDRGARSATDTITLTITNGSVSIPQGPFVISVVLLGG
                     PNQEVASNITATLTITNNGNAVLNNIVLNGTASATYNVQFQNVPATLAPGQSATVTVT
                     GTMPSSFDAVNAQCEPAAILIGTLTATAFDGTQTLSTTSNLSMQRKNHLEFEDVQIEV
                     EGSDEDLDNGDEIDMKPGDDVTITINAENSFDENREDLSLEDIEARLIVDDSFDIDED
                     VEFDDLDAEEENTQSISFNVEEDTDKGTYDVDIRLCGRVENNRGRMGERIQAKFNVER
                     EDDDVIIKSLDLDKDKVQCGEAVRLSVLLENVGDNDEDDAAILLENDDLSVNDKIDSL
                     EIDEDDGITERFTFKVPSNARTGSYTLNVNAYNDENDITDSQTIDLSVECGGSSTSER
                     TTTERSQDGQPTLNNGNIQPPVVSGDRIYAEDTTKTGFRTSNFYLPFLILVTLVVALL
                     IVLAVRSLRK"
     gene            3339..4265
                     /locus_tag="VJJ79_00050"
     CDS             3339..4265
                     /locus_tag="VJJ79_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22150.1"
                     /translation="MKLINMLIIGILLASAVFAQGGSLTFTADSATPSGAQTVISTSN
                     VLKTTIKTETVQKSATSTTNTAKVATASDLRLEKFSVKNNQGKYTAHLELKNTADLRV
                     PAPVYIGIYYAGEIFDVIKREQAVAAQEFLSLDHNFNDERNKKLTSFLLENDVKLTAR
                     LNPFEKPLGEERTIVLRKSVQSVQTAPAIPTTAAVVVEQRETQNIQDTQIQKVQNPST
                     TLPGSTEPECDGCLYENGCLKKGMRIVENNVAYYCGESFEQQKNAGENCIYNYECGSN
                     LCKDHQCSEAVPKTAKKNVVARFFNWLNSLFS"
     gene            4359..5390
                     /locus_tag="VJJ79_00055"
     CDS             4359..5390
                     /locus_tag="VJJ79_00055"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLC22151.1"
                     /translation="MFQTNFKHLFLESREVFPSILGQDVTKRHVKSALLMNRHILIVG
                     SPGIGKTTLAKDIAKTLPDITVNDCAYHCSPEQPVCPACMEAKKANKKLPTKVLKGVE
                     RFVRIQGSPDLTVEDLLGDIDPEKALSHGAMSLQAFTPGKIFKANNGILFFDEVNRCP
                     EKLQNALLQVLEEGKASLGSYSIDFPTNFLFIGTMNPEDSSTEALSQVFLDRFDVIPM
                     HYPESAELEQRIVVMKGEKLPVEFDNKLIMAAVMFIRLLREHKDIEQKPSVRASIGLY
                     ERAQANAYLDKRKKVTFKDLQDAVLSVVPHRMELKPSVKYLQSPEQFVAQQFKAFEKE
                     YGEDEGDVP"
     gene            5380..6570
                     /locus_tag="VJJ79_00060"
     CDS             5380..6570
                     /locus_tag="VJJ79_00060"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HLC22152.1"
                     /translation="MFPEEHQPLLTKEPEKIEELTGKLRSDFKEDKLMRSVLANDKDT
                     IDDGKILNEALNRGLQSFTPDLLFQQMVQNYTHAERILGERLISLLAGYDSNYVKKNL
                     NIPEFRRELKGNIAANINKLREEGLIDKEGIITEKGVELASLVLYVQEMEKIIPHGYL
                     GEKIHKKKTHYGEKGDVRIYRKGDRYKDLSIKKSVHLAVRRGHADLQALDLKVQERKS
                     KGTVYLIYALDASGSMKGNKIDVCKKAGVSLAYKAISEKDPVGLIVFGSEISEEVAPT
                     LNFGELLKKIAVIKATKETNFPLMVEKAITLFPKVKATKHLVILTDAQPTVGENPREH
                     TLKAVSEARAYGITISLIGINLDKEAVQFAQDIISIGEGRLYLVKDLDKLDQIVLEDY
                     CAVM"
BASE COUNT         2194 a         1323 c         1404 g         1739 t
ORIGIN      
        1 ttattgggtt gctgctctga ttttgctctt ctttatttat tatttcgtcc aaaaaatcaa
       61 gaagggaaaa aagtttgaaa aggttgctgc taaagctact gagattgtga ccgtggcaac
      121 tcctgaactt tcgaggaggc agcacgatgt tctccaaaca ttgagagatg tggaaaaaga
      181 gattgtgcgg tttgtacttc agcaaggggg ttccacaacg caatctaaaa tatattatgg
      241 aacgggaatt cctaagacaa gtttaagcag agcgctgcag tctcttacag tgaagaatat
      301 tctcaaaata accccctttg gaaagatgaa aagagttgaa tttagcgatt ggtttaagca
      361 aaaataggct aaaagttctt atttttttaa aaaaaggtaa aataaagctt taaagttaat
      421 aaaaagtgct ttggaacgat tttcacccaa tcgtttcgcc caacttataa atatcattct
      481 cagctctctt cagagtgctt gcccgacttg tctggcgtag catggagtaa aaaaagatgc
      541 gaaaacttgc aagcctcatc ctgttcacgg ttttagtaat tagcgtgtta gcttacaatg
      601 gccttggatt tgtccttaac gacgtcctcc agggacccca gtatcccttt aaccaagcta
      661 ctttccaatg tagttctacc ttgtttgggg actacaataa tgatgggcaa agaaacttca
      721 cagataccca aattctcttg cacagcatca acactccagc agtcgttatc aacggaagtg
      781 tcaatggtat tctttgtgat cctcttaccc tcgatgttaa tctggatggc gtggtaaata
      841 ttgcagatgc caatctctac caagggtatg ttgtctctgg cttcccacaa tgcggggatg
      901 gcatcgataa cgataacgac acccttattg attttcctac agatcttgga tgcactagct
      961 tcattgattt aacagaatct aatactactc aaacatacgc tccacaagtt accattgtaa
     1021 accctttgaa caatacaaac attgcaaacg gcacgagcgt aactctacga gcctcaacat
     1081 tcgatcttga tgagccagga aatgcagttc cctcccaaaa tattcagtgg acaagttcat
     1141 tgcagggagt tcttggaaat ggcacaactc ttaatattat cttaacctta ggaactcata
     1201 ttttaacagt acaagcaact gatagcacgg gactctcaag cactgcaacg attcaagtca
     1261 gtgttattaa tccttttaca gtcactgctt cagcaagtcc agcgagcgga agtactcccc
     1321 tcaattctgt aacaacgtgt acagcaaatc aaggaagtgc gccataccga tttagcattt
     1381 attacagcga cgcaggcaca atcagctttg tggcacagaa tagtaacgtg ctcactcaca
     1441 acagaaccta ttacaatcct ggcactgtta ctgtaacatg ccatgcagta gataatacgg
     1501 gaaacacagt ttcaggatca actcaagtta ccgtcacagg aacctccatt gttaacaacg
     1561 ctcctgatgt caacattaca actccaacaa ataattcaca atttacgcaa ggaaacagcg
     1621 taacctttac cgcagtaagt tatgatgtag aagatggaac cttgcaaagc agcaatatgc
     1681 tctgggcgag caacattgat ggcattatcg gaacgggaca tagttttagc acctcaagct
     1741 taagcctcgg aacgcatgct attgttgtca taggaaccga tcgtggagca aggtcagcaa
     1801 cagacacgat tactttaacg attaccaacg gatctgtcag catacctcaa gggccatttg
     1861 ttatctcagt agtattactg ggaggcccta accaagaggt agcaagcaac atcacagcaa
     1921 cactaactat taccaacaac ggcaatgccg ttttgaacaa tattgtacta aatggcacag
     1981 caagtgcgac atacaatgta caattccaaa atgttcctgc aacacttgct ccaggacaaa
     2041 gtgcaacggt aaccgtgacg ggcactatgc caagctcctt tgacgcagtt aatgcacagt
     2101 gtgagccagc agccattctc atcggaactc tcactgcaac agcattcgat ggaacgcaaa
     2161 cccttagtac aacttcaaac ctatctatgc agagaaaaaa tcacctcgaa ttcgaagatg
     2221 tgcaaatcga agtggaaggc agcgatgaag acttggataa cggtgacgaa atcgatatga
     2281 agccagggga tgatgtcaca attacaatca atgcagaaaa cagcttcgat gaaaataggg
     2341 aagacctaag tctagaggat attgaagcac gcttgatcgt tgatgattca tttgacatcg
     2401 atgaggatgt tgaatttgat gatttggatg cagaagaaga aaacactcaa agcattagct
     2461 ttaacgttga agaagacaca gataaaggaa cttacgatgt ggacattcgc ctttgtggaa
     2521 gagttgaaaa caacagaggc agaatgggtg aaagaatcca ggcaaaattc aacgtagaaa
     2581 gagaagatga cgatgttatt atcaaaagtc ttgaccttga taaagataag gtacaatgtg
     2641 gggaggctgt gagactttca gtgctccttg aaaacgtcgg ggacaatgat gaagatgacg
     2701 cagccatttt gcttgaaaat gatgatctca gtgttaatga taaaattgac agtctagaaa
     2761 ttgacgagga cgatggcata acagaacgct tcacattcaa agtgccaagc aatgcaagaa
     2821 caggaagtta cacactcaat gtgaatgcat acaatgatga aaatgatatt acagatagtc
     2881 aaacaattga tttgagtgtt gaatgtggtg gaagctcaac ttcagaaaga acaacgacag
     2941 aaagaagtca agatggccaa ccaaccctta acaatggcaa tattcaacct cctgttgtga
     3001 gtggggatcg catctacgca gaagacacta ccaaaactgg ctttagaaca agcaactttt
     3061 acctgccctt tttgatccta gtgactttag tggtagcctt acttattgtg ttggcagtgc
     3121 gatcacttcg caagtaaaga gaggtttgaa taatctgtta aatttgttca aacctttggt
     3181 agattacttt gaataaataa tgaattaaag gtttatcaaa gtcctctaaa gatcctctcc
     3241 agaaacccgt ataaagaggt ggagaacccc attttggggt tcgcctcttt tattttcatc
     3301 gatagattta ttaaatcagc aaacgagtcg tggtgtgtat gaaactcatt aatatgctta
     3361 tcataggcat tctccttgcc agtgctgttt ttgcgcaggg cgggagtctt acttttacgg
     3421 ctgattctgc cacaccttct ggagcgcaaa cggtaatctc aacaagtaat gtgcttaaga
     3481 caactatcaa aacagaaacg gttcaaaaat cagcaacgtc cacaacgaat actgcaaagg
     3541 tagccacagc gtctgattta cgtttagaaa agttctcagt taaaaataat cagggaaaat
     3601 atactgcaca tttggaattg aagaacactg cggaccttcg tgttcctgca cctgtgtata
     3661 tcggtattta ctacgctgga gaaatctttg atgttatcaa acgagaacaa gctgtcgcag
     3721 cccaagaatt tttgagcctt gaccacaatt ttaacgatga aagaaataaa aaattaactt
     3781 cattcttatt ggagaatgac gtcaagctta ccgctcgtct caatccgttc gaaaaacctc
     3841 ttggggagga aagaacgatt gttttacgaa aaagtgtaca aagtgtacaa actgctcccg
     3901 caattccaac gactgctgct gttgtcgtcg aacaaagaga aactcaaaat attcaagata
     3961 ctcaaattca aaaggtacaa aatccaagta caaccttgcc agggtcaact gagccagaat
     4021 gtgatggttg tctttatgaa aatggctgcc ttaaaaaagg aatgaggatt gttgaaaata
     4081 acgttgctta ctattgcgga gaaagtttcg aacagcaaaa aaatgctgga gaaaattgta
     4141 tttataacta cgaatgcgga agcaacctct gcaaagatca ccagtgttct gaagcagtgc
     4201 ccaaaaccgc aaagaaaaat gttgttgcac gcttcttcaa ttggctgaat agcctatttt
     4261 cctgatcttg ctccaaggcc gtgacccaca taacaacttt ttctactgta cccctcagat
     4321 acgaaattat ataaataccc tgctgtttag gacatgccat gtttcaaacg aactttaaac
     4381 acttattttt ggagtcgagg gaggtctttc catccatctt aggacaggat gtaacgaaaa
     4441 gacacgtgaa gtctgcctta ctgatgaaca ggcacatcct gattgtagga tcacctggaa
     4501 taggaaaaac aacccttgca aaggatattg cgaaaaccct ccccgatatc actgtcaatg
     4561 attgcgctta tcattgttct ccggagcagc cggtatgtcc agcgtgcatg gaagcaaaga
     4621 aggcaaataa aaaacttccc actaaagttt tgaagggcgt ggaacgtttt gtacgtatcc
     4681 agggaagccc agatctcacc gtggaagatc ttttaggaga cattgacccg gaaaaagcac
     4741 tttcccatgg ggcaatgtcc ctccaagcgt ttacccctgg aaaaatcttc aaagctaata
     4801 acggcatttt attttttgat gaggttaatc gatgtcctga aaaacttcaa aatgcgctcc
     4861 tgcaagtgct tgaggaagga aaggcatctt tggggtcata cagtattgat tttcccacta
     4921 atttcttgtt tataggaacg atgaatcctg aagatagttc tacggaagct ttgagtcaag
     4981 tattcctaga tcgctttgac gttattccga tgcactatcc agaaagcgca gagcttgagc
     5041 aacggatcgt tgttatgaaa ggggagaaac ttccagttga atttgataac aagctaatta
     5101 tggcggcggt catgtttatc cgtcttttac gagaacacaa ggatatcgaa caaaaaccca
     5161 gtgtcagggc atcaatcgga ttgtatgagc gagctcaggc aaatgcttat ttggataaaa
     5221 gaaaaaaagt aactttcaaa gatttacaag atgcagtact ctctgtcgtt cctcatcgca
     5281 tggaattaaa accatctgta aaatatctcc aaagccccga acaatttgta gcgcaacaat
     5341 tcaaagcatt tgaaaaagaa tatggggaag atgaaggcga tgttccctga agagcatcag
     5401 ccactcctta ccaaagaacc tgaaaagatt gaagagctca cgggaaaact ccgttctgat
     5461 ttcaaggaag acaaattaat gaggtctgtt ttagctaacg ataaagatac tatcgacgac
     5521 ggaaaaattc tcaacgaggc attaaatcgt ggtttgcaaa gttttactcc tgacctttta
     5581 tttcaacaaa tggtgcagaa ttatacccat gcagaacgca ttttgggaga acgcttgatt
     5641 agcttgctag caggttacga ttctaattat gtgaagaaaa atttgaatat tcccgaattt
     5701 agaagagaac taaaaggaaa tattgcagct aatatcaaca aattaaggga ggaaggactt
     5761 attgataaag aaggaattat tacggaaaaa ggagttgagc ttgcgtccct tgttctttat
     5821 gtgcaagaaa tggaaaaaat tattccacac ggctatcttg gagaaaaaat tcacaagaaa
     5881 aaaacacatt atggagaaaa gggcgatgtt cgcatttaca gaaaggggga tcgttataaa
     5941 gatttgtcta taaaaaaatc ggtacacctg gcagtacgaa gaggtcatgc agacttacaa
     6001 gctttggatc ttaaagttca ggaaaggaaa agtaaaggaa cagtgtatct gatctatgca
     6061 ttggacgcgt ctggaagcat gaaaggaaac aagattgacg tatgcaaaaa ggccggggtg
     6121 agtttggcgt acaaggccat aagcgagaaa gatcctgtag gattaattgt gtttggttct
     6181 gaaattagcg aggaagtcgc gcccacatta aattttggag aacttttgaa gaaaatagct
     6241 gtgattaaag caacgaagga aactaatttt ccgttgatgg tggagaaagc tatcaccctt
     6301 tttccaaagg tcaaggcaac gaagcacctg gtgattttaa cagatgcgca gcccaccgtc
     6361 ggagaaaacc cgagggaaca tacactaaag gctgtttctg aagcacgtgc gtacggtatc
     6421 actatttctc taataggcat taatttagac aaagaggctg tccagttcgc ccaagacata
     6481 atcagcattg gagaagggag actttatctg gtcaaagacc ttgacaagct agaccaaatt
     6541 gttctagaag attattgtgc tgtgatgtga gtcaagcaac attgttcatc aacgcttaac
     6601 tattagagga cttcgaaaaa cccaatcttt ggcgaccact acctttaaat aaaaaagccc
//
LOCUS       DATDZU010000004         6650 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2060562, whole genome shotgun sequence.
ACCESSION   DATDZU010000004 DATDZU010000000
VERSION     DATDZU010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6650
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2060562"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /locus_tag="VJJ79_00065"
     CDS             complement(<1..1161)
                     /locus_tag="VJJ79_00065"
                     /inference="COORDINATES: protein motif:HMM:NF014565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004576 - oligosaccharyl transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STT3 domain-containing protein"
                     /protein_id="HLC22153.1"
                     /translation="MPTEEEIKRLQKREQYLSSFRRLKIRLGALSPLSSFNRFLLPLV
                     LLLIVLSVGVWLRMQPLYMYPAEKTVDAVLEERLSNQFLLEVHNEYPTLPLADKERFA
                     QNRLEQFKKLPDYQKQRTQDIARLKDLLAPDDGFIYPLDLDSYHHLFYTKNVLKYGSM
                     SDKVVDGQKYDTFKYPPIGKARDNEHFFPYFAAWFYRLTNFLFDWTLLESFVFIPVFL
                     SAVLITLFFFFGKRIAGLAGGFFISFLVAVDTILGNRGVLGFTDTDMLNLILSLLILF
                     MAYLAFESLSLTGGISSPEKSFTKNKFFMKNQWFSLLFIVLGAFFVGLFAFTWTGWWY
                     IFIIVLISIALFIVYFFWRERKISSLVKWGIFLFIVFFLVSGLFVSLFVGFSH"
     gene            complement(1218..2099)
                     /locus_tag="VJJ79_00070"
     CDS             complement(1218..2099)
                     /locus_tag="VJJ79_00070"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLC22154.1"
                     /translation="MALKNTQNTEHTVFTKNYAYYYDLVYKDKPYAEECDFVEKLMQR
                     FSKINDETMQKSTQKTILDLGCGTGRYSLILAQRGYQVTGTDLSADMIALAKKRASDA
                     RVNVDFHVMPMQETQLDRQFDVIIGMFHVFGYLTDYQDIEKMLHKTKEHMHKDSLLIL
                     DFWNGEMVLKDTWPQKVKIFSEIVDRVPTRIIRFSFTQLDTTKNIAEVRFQTLVLEKH
                     AKPGASSTQESTQETVINEFEETHYLRYFFPEEIKNYLQAHGFEVLHLCPFLDVDGST
                     DKLQKVWSGTIVAKIKN"
     gene            complement(2223..3275)
                     /gene="gmd"
                     /locus_tag="VJJ79_00075"
     CDS             complement(2223..3275)
                     /gene="gmd"
                     /locus_tag="VJJ79_00075"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012713130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLC22155.1"
                     /translation="MKVAVITGITGQDGAYLAKFLLLKGYKVYGTYRRLSTPNFWRLQ
                     ALGILDKVELVSFDLIDQSSMLNILKKVKPDEIYNLAAQSFVGASFEQPVSTAEITAL
                     GLPRILDVMRILCPQAKFYQASSSEMFGQVQQIPQNEKTPFYPRSPYAAAKLYAHWVT
                     VNYREAYNLFTCSGILFNHESPLRGLEFVTRKITNAVARIKLGLQKELLLGNLDAKRD
                     WGYAPDFVEAMWLMLQQEHPDDFVIATGETHTVREFCEVAFQEVGLNYNDYVKVDERF
                     FRPSEVDLLIGDAGKAKQKLNWKPKTTFKELVKIMVQEDLNRWQRFQKGEHFPWDAPY
                     DYVFGQTISPTYQLDR"
     gene            complement(3398..4960)
                     /locus_tag="VJJ79_00080"
     CDS             complement(3398..4960)
                     /locus_tag="VJJ79_00080"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HLC22156.1"
                     /translation="MTHNTVCSTPAESPKTVQQASRSFYAQIAIKTSLALFIGSVLSG
                     LAAYGTRMILTRALSVTEYGLFYGVFSFVSFFLLFRDFGLPTAIIKYVADFHAKKKYH
                     DLKTALVSVTLVQFVSSVVIAVVLFAFADVIAASYFKEPKAALLLKFFVVYIFTSLFA
                     IMLKAILMGFRSKFFPFFELFKNTTNLLFLLVAAPLSFGVLLPLFGQIFSWIIMIGIC
                     VYILLRHHFQFFDYHVTNLKSSTKLMLSFGLPVLLATIGYQVIGQIDTLFLVYLRTLD
                     EVGVYNTVLPASLVFLLFGKSVADIIFPLFAEMWAKHEQSKIQQGVTEVYKYGFILSA
                     PVLLFFFVYARLFLELSFGLVYGVGAQAFQILLIGILFYIMVMINNHILAAIGKPAIT
                     TKIVLGSAVLNIVLNTIFIPPFGMGGAALATSLSYLTMLLFSTLYVAKELSVAPPWLF
                     WTKSFVAGGIYLAVAYGLESILDPIVFYLRIPFVFLVACLGYVAALFLLRMVSWQEVQ
                     EKKRLLFRVFGR"
     gene            complement(5232..6026)
                     /locus_tag="VJJ79_00085"
     CDS             complement(5232..6026)
                     /locus_tag="VJJ79_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22157.1"
                     /translation="MLLDFQEIESGISNGIPLPKLELRLQPGEYSDGGFLAPGERLLE
                     VIRKDHETLQRLGTDYEKMARLTYIILDQEKSEFWTARKGSYPHITYPRMTSECIRYD
                     KDRFTAEVALYAGFQICPWGCRGIDQYGFSTVSNYTLYMTDRTDEKSREFFERFYVGH
                     DQIWNDCKKEFMVGDLREPEQYLAADQKRMEELNKRTCAFDHSLGIVYGGEDRVRFLT
                     SFVVLTDLTPHLIASHFFFEGAASYRTDPEKLIEFAGVDGEAILKR"
     gene            6338..>6650
                     /locus_tag="VJJ79_00090"
     CDS             6338..>6650
                     /locus_tag="VJJ79_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22158.1"
                     /translation="MVCPSKSALQYTAKKLSAGFWQRVLKATSGTAYLVAIDSTDSSR
                     TNPSYHYLRRIDGEMPKIPVKLSVAFDTRKKKFCAAKIRVLPAHDIRDAKFLLRNSNP
                     KI"
BASE COUNT         2124 a         1387 c         1420 g         1719 t
ORIGIN      
        1 atgtgaaaag ccgacgaaaa gactgacaaa gagtcctgaa acaagaaaaa aaacaatgaa
       61 gagaaaaatc ccccatttga cgagagaaga aatttttcgt tcacgccaga aaaaataaac
      121 aataaaaagc gcgatgctga taaggacgat gataaagatg taccaccagc ccgtccaagt
      181 aaatgcaaac aagccgacaa aaaaagcccc gagaacaata aacaagaggc tgaaccattg
      241 atttttcata aaaaatttgt ttttcgtaaa agatttttca ggcgaagaaa tgcctcctgt
      301 caaagaaagg ctttcaaaag caagataagc cataaaaaga atcaaaagac ttaaaataag
      361 gtttaacata tcggtatcag taaaaccaag cacaccgcga ttgccgagga tggtatcgac
      421 cgctacgaga aaactgatga aaaagccgcc ggcaagacct gcaattcttt tgccaaaaaa
      481 gaaaaagagg gtaatcaata cagcagataa aaagacagga ataaaaacaa aggattctaa
      541 aagcgtccaa tcaaataaaa aattggttaa gcggtaaaac catgctgcaa aatacggaaa
      601 aaaatgttcg ttatcgcgcg cttttccaat tggaggatac ttaaacgtgt catacttctg
      661 gccgtcaaca actttgtcag acatggagcc gtacttcagc acattcttgg tataaaaaag
      721 atggtggtag gaatccagat caagaggata aataaaaccg tcgtcaggcg ccagaagatc
      781 tttcaaacgc gcaatatctt gtgtacgctg cttctgataa tcaggaagtt ttttaaattg
      841 ttcaagacga ttctgtgcaa aacgctcttt atctgccaat ggaagggtag gatactcatt
      901 atgcacttca agaagaaact gattggagag ccgttcttcc aaaacagcat ctactgtttt
      961 ctcagcagga tacatataca ggggttgcat tctcagccaa accccgacgc tgagcacgat
     1021 caaaagaaga acaagaggaa gaaggaagcg attgaaagag gagagaggag agagagcacc
     1081 taaacgtatc tttaatcgac ggaaagagga gagatactgt tctcgcttct gcaatcgttt
     1141 gatttcttct tcagttggca ttgtctaaac acctagctcc ccattctccc ggaaatatta
     1201 ggtagtggaa atctcattta gtttttgatc ttcgcaacaa tcgtcccact ccaaactttt
     1261 tgaagtttgt ctgtgcttcc atcaacatct aaaaagggac acagatgaag cacctcaaat
     1321 ccgtgcgcct ggagataatt tttgatctct tctggaaaaa agtaccgcag gtaatgggtt
     1381 tcttcaaatt cattgatgac ggtttcttga gttgattctt gcgttgatga tgctccaggt
     1441 ttggcatgtt tctcaagcac taatgtttga aaccgcacct ctgcaatgtt ttttgttgta
     1501 tccagctggg taaacgaaaa tcggataatg cgcgtaggaa ccctgtcaac aatttctgaa
     1561 aagattttca ctttttgagg ccaggtatct ttgaggacca tttcgccgtt ccaaaagtca
     1621 agaataagaa gagaatcctt gtgcatatgt tctttcgttt tgtggagcat cttttcgata
     1681 tcttgataat ccgtgaggta gccaaaaaca tgaaacatac cgataatcac gtcaaactgc
     1741 ctgtcaagct gggtctcctg catgggcata acatgaaaat caacatttac ccgggcatct
     1801 gatgcgcgtt tctttgccag cgcaatcatg tcggctgaaa gatcggtgcc ggtaacctga
     1861 tacccgcgct gagcaagaat aagagagtat cttcctgttc cgcagccaag atcaagaatc
     1921 gttttttgag ttgatttttg cattgtttcg tcgtttattt tcgaaaaacg ttgcatgagt
     1981 ttctcaacaa aatcgcattc ttcagcatag ggcttgtctt tatagaccag gtcataataa
     2041 taggcatagt tcttggtgaa gactgtgtgt tcggtatttt gggtattttt caaggccata
     2101 gcataaacct catcagagca agaatctcgc cgtatgcgat gatctcgacg atgatctcaa
     2161 aataagatgc atggataaga ggtatggact ggaggggacc gacagagggg cctcttgagc
     2221 gttcagcgat caagctgata tgtgggagag atcgtctgcc caaacacata atcatacggg
     2281 gcgtcccaag ggaagtgttc tcctttctgg aagcgctgcc aacggttgag gtcttcttga
     2341 accataatct tcacgagttc tttgaaggtg gttttgggct tccagttcaa tttctgtttc
     2401 gccttgcctg cgtcgccaat taacaggtca acttctgaag gcctgaaaaa gcgttcgtca
     2461 actttgacat agtcgttata attgagtccg acttcttgaa atgcaacttc acagaattct
     2521 cgaactgtat gtgtttctcc tgttgcaatg acaaagtcat cgggatgttc ctgctgaagc
     2581 atcagccaca tggcttcgac aaagtcagga gcataccccc aatcccgctt ggcatcaaga
     2641 tttcccaaca agagctcctt ctgaagaccg agcttgatgc gtgcaacggc attggtgatt
     2701 tttcgagtga caaactcaag tccgcgaagc ggtgattcgt ggttgaagag gatacctgaa
     2761 caggtaaata ggttgtatgc ttcgcggtaa ttaacggtga cccaatgtgc atataatttt
     2821 gcagcagcat acggacttcg ggggtaaaaa ggagtttttt cattttgagg aatttgctga
     2881 acttggccaa acatctcact actggaagct tgataaaatt ttgcttgggg gcagaggatt
     2941 ctcattacat caagaattct tggaagtccc agtgcagtga tttcggcagt tgaaaccggc
     3001 tgttcaaaag aagctcccac aaaactctgt gcagcaaggt tgtagatttc atcaggtttg
     3061 acttttttca aaatgttgag catcgaactt tgatcaatga gatcaaaaga aaccagttca
     3121 actttatcaa gaatacctaa ggcctgcaga cgccagaaat tgggggtgct gagccttcga
     3181 tacgttccat agactttgta tcctttcaaa agcaggaatt ttgctaaata ggccccatct
     3241 tgcccggtaa ttcctgtgat cactgcaact ttcatagata ttccccctca cctaccaccc
     3301 actaccaacg acctacaaac ccctcattta tatatcttgc gccacttgtt taaaaggatt
     3361 taaaagggaa atgaggaaca aaagaggaac agggaaatta ccgaccaaat accctaaaaa
     3421 gcagacgctt cttttcctgg acttcctgcc aagacaccat gcgaagaagg aaaagtgcag
     3481 caacataccc taaacaagca accaaaaaaa caaagggaat tctcaggtag aatacaatcg
     3541 gatcaagaat ggactcaagg ccatacgcta ctgcgagata gatgccacct gcaacaaaag
     3601 attttgtcca gaacagccaa ggaggggcaa cggataattc ttttgccaca tacaacgttg
     3661 aaaacaggag catggtgagg taacttaaac ttgttgccaa ggcagcaccg cccataccaa
     3721 agggagggat aaaaatagta ttgagaacaa tattcaaaac cgcagatccg agcacaattt
     3781 tggtcgtgat tgccggcttc ccaatagctg caagaatatg gttgttgatc atgaccataa
     3841 tataaaaaag gatgccaata aggagaattt gaaatgcctg ggcgccgacg ccatagacaa
     3901 gcccaaacga gagttctaaa aaaagccgtg catagacaaa aaagaataag agcacaggag
     3961 ctgaaagaat aaaaccatat ttatacacct cggtaactcc ctgctgaatc ttgctctgct
     4021 catgctttgc ccacatctct gcaaagagag gaaaaataat atccgcaacc gactttccaa
     4081 acaataaaaa gacaagagaa gcaggaagca cggtattgta gacgccgact tcatcaagtg
     4141 ttcttaagta gacaagaaaa agagtatcaa tctgcccgat cacttgatag ccaatagttg
     4201 cgagcagaac cggaagcccg aaagaaagca tcaactttgt tgaacttttc agattcgtaa
     4261 cgtgataatc aaaaaattgg aaatgatgcc tcaaaaggat gtacacacaa ataccaatca
     4321 taataatcca tgagaatatc tggccgaata agggaagaag aactccaaag ctgagaggag
     4381 ctgcaacaag aaggaataaa agattggttg tgtttttgaa gagttcaaaa aaagggaaaa
     4441 attttgaccg aaatcccatg agaatagcct tcagcataat agcaaaaagg ctggtaaaga
     4501 tatagaccac aaagaacttc aggagcaatg ctgccttggg ctctttaaaa taggaggctg
     4561 caatgacatc agcaaatgca aaaagaacga cagcaataac aacagaactc acaaactgca
     4621 ccagcgttac agaaacaagt gcagttttca ggtcatgata tttctttttg gcatgaaaat
     4681 cagcaacata tttgataatc gcagtaggca gtccaaaatc acggaataat aaaaagaagc
     4741 tgacaaaact gaacacgcca tagaagagac catactcagt aacactaaga gcccgtgtta
     4801 agatcatgcg cgttccgtac gcagcaagac ctgataaaac agaaccaatg aaaagtgcaa
     4861 gcgaggtttt aatagcaatt tgcgcataga atgaccggga agcctgctga acggttttcg
     4921 gagattcggc aggtgtgctg catacggtgt tgtgtgtcat gtactattta aaaagatgga
     4981 ggggtattta aaagtttagt cgttggctcc ttggggaggt cagagagact ctggtgaaaa
     5041 agtgtgctac gaggccagcg ccgcccagca cattttcttt attgccaaat ggtgtttcaa
     5101 tgtcatccag tcccatggag ccgatgatga tgatgattgg gcataggagg aagggaaaaa
     5161 gaggaggtta taaagatttg tgtaattaaa atgggtctgt tatcccgaag attaaacact
     5221 atcacattta atcacctttt aagaattgct tcgccatcta ctccggcaaa ttctatcaac
     5281 ttctccggat cggttcggta cgatgctgcc ccttcaaaga aaaaatgtga ggcaatcaaa
     5341 tgtggagtta aatcggtaag gaccacaaag gaagttaaga atcttactct atcctccccg
     5401 ccatacacaa tgcccaggct gtgatcaaaa gcgcatgttc gtttatttaa ttcttccatc
     5461 cttttctggt cggctgcaag atattgttct ggttctctta gatcgcctac cataaattcc
     5521 tttttacaat cgttccatat ttgatcatgg ccaacataaa atcgctcgaa aaattcccta
     5581 gatttttcat cggttctatc tgtcatgtat aaagtataat tagatactgt agaaaacccg
     5641 tactggtcaa ttcctctgca cccccacggg catatttgga aaccagcata aagagctacc
     5701 tctgcagtaa aacgatcttt atcgtacctg atacattcac ttgtcatgcg tggataggtt
     5761 atgtggggat aagacccctt tcgtgctgtc cagaattcac ttttttcctg atctaaaata
     5821 atataagtga gtcttgccat tttttcatag tccgtaccta atcgctgaag agtttcatgg
     5881 tcttttctaa taacctctaa taatctttct cccggcgcga gaaagccgcc atcagaatac
     5941 tcaccaggtt gtaaccgtag ttctaacttg ggcaggggaa ttccattact tattccgctt
     6001 tcgatttctt gaaaatcaag taacatattt gaatcgaaac ctgcacatct ttatattgct
     6061 atcccttgtc cgggctctgt cctaaatctc aaaaaattta ataacccaag cagccattag
     6121 gctgcttggg ggtggggagc gtagccccac catggaaaaa gaagcgaagc tggttaaaaa
     6181 agttaagcgt cttttaaggc gtttaggatg cccaaggtgg ttgcaccact tcggaccaaa
     6241 gacgtatgaa ttttggcagc attttgctgc gttacttgtt cgttttttct gtcgattgtc
     6301 ctattgtaga ataaagcatt tctgcaattt gcttggcatg gtttgtccaa gcaaatcagc
     6361 attgcagtat actgcaaaga aactctctgc cggattttgg cagagagttc ttaaggcaac
     6421 aagcggcacg gcataccttg ttgccattga cagcacggat tcgtcaagga caaatccaag
     6481 ttaccattat ctgcgccgta tcgacggcga aatgccaaaa attcctgtga aattgagtgt
     6541 agcttttgac acgcgaaaaa agaaattttg cgctgcaaaa atccgcgtgc ttccagcaca
     6601 cgacatcaga gacgcaaaat ttcttcttcg caacagcaat ccaaagattg
//
LOCUS       DATDZU010000005         4721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1893997, whole genome shotgun sequence.
ACCESSION   DATDZU010000005 DATDZU010000000
VERSION     DATDZU010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893997"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..2299)
                     /locus_tag="VJJ79_00095"
     CDS             complement(92..2299)
                     /locus_tag="VJJ79_00095"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012617345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HLC22159.1"
                     /translation="MEYPKMANGKKADVHISGMHCASCAVSITKALKKQEGVLDAYVN
                     YSTAKATITFDEKKIQEEGLLAAVKHVGYGAELVTDETSSVKKQESDMVRERDFYKRR
                     FMVSLIFAIPTVVIGTILMQFGIEVPFAEYILWVLATPVQFVVGWPFYVGTWSALKRR
                     SANMDSLIAIGTSTAYFYSFYAVLFNPSLGQYFEVSSILITLVVMGKWLEAVAKGKTS
                     EAIQKLVGMSPKIATVILNGKEVKIPVDDVKTGDVLLVKPGEKIPVDGVILDGHSSID
                     ESMVTGESMPVEKTKRDMVIGATINKVGSFTFRATKVGANTTLARIIKLIEDAQGSRA
                     PIQRFADAVSAYFVPIVIAISSVTFFIWFSIGAGTSFALLTAVAVLVIACPCALGLAT
                     PTAIMVGTGKGAKSGILIKGGEALETAHKLYAIILDKTGTITHGHPEVTDIIAVKEKK
                     DTVLRIAASLEKSSEHPLAEAIVKKAKNIHFGKVTGFNAVPGYGIEGKIGNVSYAFGN
                     IKLLQREKVDFKAYKKQIEALEEEGKTVMLLASKKQLLGMIAVADTIKESSPKAVAQL
                     KELGINVYMITGDNERTANAIARKVGIENVFADVLPEQKANYVKKLQKEGAVAMVGDG
                     INDAPALAQADIGIAMGSGTDVALETGNIVLMRDDLEDVPRAIKLSKMTIAKIKQNMF
                     WALFYNVLGIPIAAGVLYPFTGWLLSPIIAGGAMALSSVSVVANALLLQRKKL"
     gene            complement(2299..2694)
                     /locus_tag="VJJ79_00100"
     CDS             complement(2299..2694)
                     /locus_tag="VJJ79_00100"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLC22160.1"
                     /translation="MGIKDILQTLAVFVVIVLVASGISSLLNKDRSSGNITGTVVADG
                     DAQVVTLSANGVYYIVDPTTVKAGVPVQMVADLDNLFGCLRAVRIPQLGVSKNVKTGD
                     NVIEFTPEKVGTYTITCSMGMGKGTLVVE"
     gene            complement(2696..3622)
                     /locus_tag="VJJ79_00105"
     CDS             complement(2696..3622)
                     /locus_tag="VJJ79_00105"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HLC22161.1"
                     /translation="MKVKIFVPDIECESCVKLLEKKLKYLQGVKEKTFYNDSVDVTYD
                     SALITPENIVAAIREMEFRASVHPFERKTVKERVRDWKENRHKYQTEIAVLKYAVYLF
                     LILGVLESIAYLGFFTTVPFFLQQYGWWLLYLNLSVATLGAALWHYLSYQARMTSMVG
                     MMIGMTLGMQTGLMLGAVLGATNGFFIGATAGLVLGVCVGALAGSCCGIMGILEGVMA
                     GVMGGTMGAMISVMMLSDHILWFMPVYMIVNIFVLLGFSYMLYEEVVEGREGVTRRRI
                     DFFTFASGCIIITAVLSSVMIYGLKSFIVGGV"
     gene            complement(3619..3825)
                     /locus_tag="VJJ79_00110"
     CDS             complement(3619..3825)
                     /locus_tag="VJJ79_00110"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HLC22162.1"
                     /translation="MKTITVKIKGMHCKSCEVLITDDLKETGAVSDVQISHKTGQAKI
                     TFDEKNIDEKKIKAVIKQEGYTLA"
     gene            complement(3876..4379)
                     /locus_tag="VJJ79_00115"
     CDS             complement(3876..4379)
                     /locus_tag="VJJ79_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22163.1"
                     /translation="MPRSAQKHIGIFFAITGILLLTFLVFIKNGVDERDVFLCDAIAK
                     AGMDMNECPAHDSYTSWFLVGAFIVGFMLFAIGAYWSIMPVKKEPVEKKEELAYNQVD
                     RETLTEEERKIYDLLRIKDGSMYQSELIQETGFSKVQMTRILDRMEGRKIIERKRRGM
                     TNVIILH"
     gene            complement(4425..>4721)
                     /locus_tag="VJJ79_00120"
     CDS             complement(4425..>4721)
                     /locus_tag="VJJ79_00120"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HLC22164.1"
                     /translation="IGIMKAIGARNSDIIKLFIVEAGIIGLIGGILGTALGSGIALVV
                     GPLSKNAGFTINVTLDPVIIFFGLFFAAGIGILAGILPAYQASRLKPVDALRYE"
BASE COUNT         1236 a         1211 c          869 g         1405 t
ORIGIN      
        1 aggatttcac caacatgatg ataacaactg gtatgaagat attctcgatc ccgtaactga
       61 ataggtttct cactcattaa aaaagaaaaa attataattt cttcctctgc aacaacaatg
      121 cgttcgccac cacacttaca ctactcagtg ccatcgcgcc acccgcaata atcggcgaga
      181 gtaaccagcc ggtgaacggg tacaacacgc ctgcagcaat tggaattccg agaacgttgt
      241 agaacagcgc ccagaacatg ttctgcttaa tctttgcaat agtcatcttg ctgagcttga
      301 ttgcccgcgg cacgtcttcc agatcgtcgc gcatcaagac aatatttccc gtctccagtg
      361 caacgtctgt cccagagccc atcgcaatcc cgatgtctgc ctgtgcaagc gccggcgcgt
      421 cattgatccc gtcgcccacc atggcaactg ctccttcctt ctggagcttc ttgacatagt
      481 ttgctttctg ctccggtagc acgtccgcaa atacattctc aatgccaact tttcttgcaa
      541 ttgcgttagc tgttcgttcg ttgtcgccag tgatcatgta cacgttgatt cctaactctt
      601 tcaactgcgc cactgctttc ggcgacgatt ctttgatcgt gtctgcgacg gcaatcattc
      661 cgagaagttg tttcttcgaa gcgaggagca tcaccgtctt tccttcctct tccaatgctt
      721 ctatctgttt cttgtatgct ttgaagtcaa ctttttcccg ttgcagtaat tttatgttcc
      781 cgaaagcata tgaaacgttt cctatttttc cctcaatacc atagccagga actgcattga
      841 accctgtgac ctttccaaag tgaatatttt ttgccttctt cacaattgct tcggctaacg
      901 ggtgctcaga acttttttct aatgacgctg cgatgcgaag aactgtatcc tttttttctt
      961 ttactgcaat aatatcggta acttcaggat gcccgtgcgt aattgttccc gtcttatcca
     1021 agataattgc gtaaagcttg tgcgcagtct ctaatgcttc cccgcctttg attaagatcc
     1081 cgctctttgc accttttcca gtgccgacca tgattgccgt cggtgttgca agcccaagtg
     1141 cacaaggaca tgcgattacc aatactgcaa ccgctgttaa aagtgcgaaa gacgtccccg
     1201 caccaataga gaaccatata aagaatgtta cggaagagat tgcaataaca atcggaacaa
     1261 agtacgcaga gactgcatct gcaaaccgct ggatcggtgc cctgcttccc tgtgcatcct
     1321 cgataagttt aatgatccgc gcaagcgtcg tgttcgcgcc aacttttgtt gcacgaaacg
     1381 taaatgaacc tactttgttg attgttgcgc caatgaccat atcccttttc gttttctcga
     1441 caggcatact ttctccagtc accatgcttt cgtcaatcga cgaatggcca tcaagaatca
     1501 cgccatcgac agggattttt tctcctggct ttacgaggag cacgtcgcct gtcttaacat
     1561 catcgacggg aatcttaact tcttttccgt tcaggataac tgttgcaatc ttagggctca
     1621 tgccgacaag cttttggatc gcctctgacg tttttccttt cgcaactgct tcaagccatt
     1681 tgcccatgac tactaatgtg ataagaatcg aagatacttc aaaatattgt cctaaagaag
     1741 gattgaagag aacagcgtag aaactgtaaa agtatgccgt actggttccg atggcaatca
     1801 agctgtccat gtttgccgaa cgtcttttca atgcagacca tgtgcctacg taaaatggcc
     1861 aacctacaac aaactgtact ggtgttgcaa gcacccagag aatatactcc gcaaatggca
     1921 cctcgatacc gaactgcatt aaaatagttc ctatcacaac tgttggaatc gcaaagatga
     1981 gacttaccat aaagcgtctt ttgtagaaat cacgttccct aaccatatcc gattcttgtt
     2041 tttttacaga acttgtttca tctgtgacaa gctctgcgcc atagccgacg tgttttactg
     2101 ccgcaagaag accttcttcc tgaatctttt tctcatcaaa tgtaattgtt gcttttgccg
     2161 tcgaataatt gacgtacgca tccagcactc cttcttgttt cttcaatgct ttagtgatgc
     2221 tcactgcgca gcttgcacag tgcatgccag aaatgtgtac atctgccttt tttccatttg
     2281 ccattttagg atactccatt actctaccac caacgtccct ttgcccatac ccatcgaaca
     2341 agtaattgta tacgtcccta ctttttccgg tgtgaactcg attacgttgt ctccagtctt
     2401 gacattctta cttacgccta attgaggaat gcgaactgcg cgaaggcagc caaacagatt
     2461 gtccaagtct gcaaccatct gcaccggaac acctgctttg actgttgtcg gatcgacgat
     2521 ataatatact ccattggcac ttaatgtcac tacttgcgcg tctccgtctg ctaccacggt
     2581 gcctgtgata ttacctgagg atctgtcttt attcaggagc gatgaaatgc cactagcaac
     2641 aagaacaatg accacaaaaa ctgcaagcgt ttgtaaaata tctttgattc ccatattata
     2701 cccctcccac gatgaacgat tttaatccgt atatcataac actactgagt actgcagtaa
     2761 taataatgca tcctgatgca aacgtgaaga aatctatcct gcgcctcgta accccttctc
     2821 gtccttcaac aacttcttca tacaacatgt acgagaaccc aagtagaaca aaaatgttta
     2881 ctatcatata cacaggcatg aaccataaaa tatgatccga aagcatcatc acgcttatca
     2941 tcgcccccat cgttccgccc atgacgccag ccatcacgcc ctcgagaatg cccattattc
     3001 cacagcaaga acctgctagt gcaccgacac aaacgcccaa cactaatcct gctgttgcgc
     3061 cgataaaaaa gccattcgtc gcgccaagca ctgcgccaag cattaaaccg gtctgcatcc
     3121 ctaatgtcat cccaatcatc atgccaacca tgcttgtcat tcgtgcctga taggaaaggt
     3181 agtgccaaag tgctgcgccg agggttgcca cgctgagatt aagatacaaa agccaccagc
     3241 cgtactgttg aagaaaaaat gggacagtgg tgaagaagcc aagatatgca atggattcta
     3301 acacccctag tatcaagaat aagtatactg catattttag tactgctatc tctgtctgat
     3361 acttgtgccg attttctttc caatcccgta cccgttcttt tactgtcttt cgttcaaatg
     3421 gatgcactga cgcacggaac tccatctctc gtattgctgc gacgatattt tcaggagtga
     3481 ttagagcgga atcgtatgtc acgtcgacgc tatcattgta gaacgttttt tctttgactc
     3541 cctgcaaata ttttagtttc ttttcgagaa gcttcacgca actttcgcat tcaatgtctg
     3601 gaacgaaaat ttttactttc atgcgagagt atatccttcc tgcttgataa ccgcttttat
     3661 tttcttctcg tcaatatttt tttcgtcaaa cgtaatcttt gcctgtcctg tcttgtgcga
     3721 gatctgaaca tctgagactg cgccagtttc tttaagatcg tctgtaatga gcacctcgca
     3781 gcttttgcag tgcatgcctt tgatttttac tgtgattgtt ttcatgcatc ctaataaaaa
     3841 agaaacacct tattaacata tgtgtgaaac tagtttcagt gaagtatgat aacgtttgtc
     3901 atgcctcttc ttttccgctc gatgattttc ctcccttcca tcctgtctaa aatccgtgtc
     3961 atctgtactt tggagaagcc tgtttcttga atcagctcac tctggtacat ggatccatct
     4021 tttattctga gaaggtcata tatttttctt tcttcttctg ttaatgtttc tctatctact
     4081 tgattgtatg caagctcttc ttttttctct acaggttctt ttttcaccgg catgatgctc
     4141 cagtatgccc ctatagcaaa gagcataaag ccgacgataa atgcgcccac gagaaaccat
     4201 gacgtatagc tatcatgtgc aggacattca ttcatatcca ttcccgcttt tgctattgca
     4261 tcacacaaga atacatccct ttcatcaacg ccattcttga taaaaaccaa aaatgtcaga
     4321 agaagtattc ctgtaattgc aaaaaatatt cctatatgct tttgtgcact tctcggcata
     4381 ccgagaaaaa acaagtcgtt ctttttaaac gtttgtaagc tactttattc gtaccgcaac
     4441 gcgtcaacag gtttcaagcg cgacgcttga taggcaggaa gaatacctgc gagtatacca
     4501 atacctgctg caaagaacaa cccaaagaaa attattacag ggtctaaggt gacattaata
     4561 gtgaatccag cattctttga gagcggtccg acgacaagcg caatgcctga accgagcgca
     4621 gtcccgagaa ttcctcctat caatccaata atccctgctt ccacaataaa aagtttgatt
     4681 atatcgctgt tgcgcgcgcc aattgctttc atgatcccta t
//
LOCUS       DATDZU010000006         6025 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1890104, whole genome shotgun sequence.
ACCESSION   DATDZU010000006 DATDZU010000000
VERSION     DATDZU010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6025
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1890104"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1147)
                     /locus_tag="VJJ79_00125"
     CDS             complement(23..1147)
                     /locus_tag="VJJ79_00125"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HLC22165.1"
                     /translation="MKKIITLFMVMLLLSPTILASENDAEKVRVLVTFESTPDTALME
                     HAGGRVLHTYTLLDNVVAVEVPANALPGLLANPHVVSVEFDAVVEALAKPSNSQPAQS
                     TPWGIDRIDADVAPGNGLGVTVCVVDTGIDQDHPDLQANIVGGKNFVAKGVTVDPNKW
                     DDDNGHGTHVAGTVAAVDNTIGVIGVAPQASLLAAKVLDRTGSGYLSGVIAGIDYCVS
                     SGADVISMSLGTSSDVQAMHDAVDAAYAQGVLLVAAAGNDYGGAVSYPAAYSSVIAVS
                     ATDSTDALASFSSVGPEVELAAPGVSVLSTWKGGGYNTISGTSMATPHVSGVAALAIE
                     ANPTLTNVEIRALLQSTADDLGAVGRDTSFGYGLVDAELV"
     gene            1251..1712
                     /locus_tag="VJJ79_00130"
     CDS             1251..1712
                     /locus_tag="VJJ79_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22166.1"
                     /translation="MRRIFTVLILFLLSISFVVAHKEDTLAQGEAIVEQKTSCDSLSD
                     DQLEAVGELYMEQMHPGALHDAMHTAMGLEEGTEEHKEFHVLLAQRMYCGENVVWSGM
                     PGGYGMMGMMYGNWGWFFLWFFWILLFIIIFAAVFALVFWLVWKSLNKKKR"
     gene            complement(1715..1820)
                     /locus_tag="VJJ79_00135"
     tRNA            complement(join(1715..1776,1797..1820))
                     /locus_tag="VJJ79_00135"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1762..1764),aa:Leu,seq:taa)
     gene            2086..2751
                     /locus_tag="VJJ79_00140"
     CDS             2086..2751
                     /locus_tag="VJJ79_00140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22167.1"
                     /translation="MILVLNGPYWFRGFDAILGILFALITFLIAAVSYKAYKITEEKK
                     YSYFSVSFFLMSLAFFLTGIFEVFLTTHVWDLLSQWLSQFDLVFLAHMLLIFLAYVSL
                     LIITLKITDRKVIALLFSLILLFTLFSYQYYLKFHIISFLLLFFLSYQFYTNYLEKKQ
                     FNAKLVFIAFYLLTCAEVFFLAIMYDQVLYVVGALLQLLGYILLFYVFVQVVYHGGTK
                     RKT"
     gene            2726..3001
                     /locus_tag="VJJ79_00145"
     CDS             2726..3001
                     /locus_tag="VJJ79_00145"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HLC22168.1"
                     /translation="MAGRREKLDIIKDILEAIRDKGGKIKPTHLLYKSNLSHDSMKRY
                     VQELVEKDMVQEIEEKKENKKYVITDKGLKFLTDYRQIKEFTDSFGF"
     gene            3086..3280
                     /locus_tag="VJJ79_00150"
     CDS             3086..3280
                     /locus_tag="VJJ79_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22169.1"
                     /translation="MSYLGEKRFEWVYKTSPEFLEQLQKAKEEVLDEAMKLVFDEAIR
                     LRTYFIRERKRLEKPDENLN"
     gene            complement(3281..4021)
                     /locus_tag="VJJ79_00155"
     CDS             complement(3281..4021)
                     /locus_tag="VJJ79_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22170.1"
                     /translation="MKKRLLIFIGLFFVLSLHAALAVENCTESDNGNNPTIDGTLKVY
                     DDTTDGYFTSSDICRSHVDRYIVTEYYCNGLLSATQNYYCNSCDINTRTCYEADDVSS
                     SFSYSESDSGQEYTVAGLVKITTTYIENSTETAISSGVTTTKADTCIPYGMYKGYLRE
                     YYLSAMEIKSEDIDCSNVGSGYVCSEGVCMPATKVSSAFLRTLDFKTSASTGAIVVLI
                     IGIMGIATYRLLHQKKKNNTSKKLRNKR"
     gene            4299..>6025
                     /locus_tag="VJJ79_00160"
     CDS             4299..>6025
                     /locus_tag="VJJ79_00160"
                     /inference="COORDINATES: protein motif:HMM:NF039823.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5667 domain-containing protein"
                     /protein_id="HLC22171.1"
                     /translation="MKRLYSLLVLFLMFGAVFVSGQENATNGTSGGTGTLACTDTDGG
                     NDPYTLGSTTTNASTGYFFPESCRAVYGANIMQEFFCNASASIGASGISYYCDSCGSP
                     TYCVPSTQIRNEVVYTDSDGGISPLIYGELTLTTSHYENSNGNLISTGTSVYNDQCSY
                     FGNNGLLYDWYNYNAETGYGFTFGANFSLAQKVINCSLTYGPSYSCVSGACFSSVLNN
                     ITLSNATNVTLSNVTITNGTNITTTTNVTNGTTGNITGNVSAPGENVTEAPKENVTSP
                     GGKGYGKGGKKKFLAYETKSLSMEAGVTPDSTLYFFDVALDRIALNLARNPQSRAERG
                     LLIAQERLLEIEELIAEKKFDKIWRAQDEHKKALADVELAAEELEEDDASEELQGKVE
                     LELKVKEYQDRLENTEAELEEKLAEGELTLVDWQQVSAIVSEVRSQAYALQGKVQEEK
                     EKTEVKVEQEGLDAEDIEKEIKDEVGFVPEETDVVKWGAAAETEEETEETKGEAKAEK
                     KGDEGAGPREAPAVESSEGTTASDSGESASADAGASSSGSSSGGSSASSGSSSGGGKS
                     AASSAGASAG"
BASE COUNT         1796 a         1195 c         1387 g         1647 t
ORIGIN      
        1 aagaaaagaa aaaaataaga aattaaacga gctctgcatc cacaagcccg tatccgaaag
       61 aagtatctct tcctacagcg cccaagtcat ctgcagtgct ctgcaatagc gcacgaatct
      121 cgacgttcgt caaggtagga ttagcttcaa tcgcaagtgc agcaactcca gacacgtgcg
      181 gcgttgccat gctcgttccg cttatggtgt tgtagccccc acccttccat gtagacagga
      241 cgctcacgcc cggcgctgcg agttcgactt caggaccaac gctgctgaaa gaagcaagcg
      301 catcagtact atctgtcgca gacacagcga tcacggaact atatgcggca gggtaggaca
      361 ctgcgccacc gtaatcattc cctgcagcag caacaagcag aacaccttgc gcatatgcag
      421 catcaacagc atcatgcatc gcctgcacat cagagctggt accgaggctc atagaaatca
      481 cgtcagcacc gctgctgaca caataatcaa tcccagcaat cacaccgctc aggtacccag
      541 atcctgttcg atccaaaact tttgcagcga ggagagaggc ttgcggcgca acgccaataa
      601 ctcctatcgt gttatcgacc gcagcaaccg ttccggcaac atgcgttccg tgcccattgt
      661 catcgtccca tttgttcggg tcaacagtca caccttttgc aacaaaattt ttcccgccca
      721 caatatttgc ttggagatcc ggatgatcct ggtcaatgcc ggtgtcgacg acacagactg
      781 tcacgcccaa accatttcca ggtgcgacat cagcatcaat gcgatcaatt ccccatggtg
      841 tgctttgtgc aggctggcta ttgcttggct ttgccagtgc ttctactact gcatcaaact
      901 ccacgcttac gacgtgcggg tttgcaagaa gcccaggcaa cgcgttcgct ggaacttcca
      961 cggcaacgac attatcgagc aacgtatagg tatgcaagac acgaccacca gcatgttcca
     1021 tgagtgcagt atccggcgtg ctttcaaacg tgacgagcac ccttactttt tctgcgtcat
     1081 tttccgaggc taagatcgtc ggagaaagga gcagcataac cataaacaaa gtaataattt
     1141 ttttcatttt tattttcctc cagtaacatt tttcttttca tgagggagca gtaagagtat
     1201 ttaatggttt tggaataggt ttaaataaaa gaaaaacatc ttaagaaaag atgagaagaa
     1261 tttttactgt attgattcta tttctcctga gcatttcttt tgtcgttgca cacaaggagg
     1321 atactcttgc gcaaggagaa gcaattgtcg agcaaaaaac ttcgtgtgac agtctttctg
     1381 atgaccagct agaagcagtc ggcgaattgt acatggagca gatgcacccg ggagcgttgc
     1441 acgatgcgat gcacacggcg atgggtcttg aagaaggaac agaagagcat aaagagtttc
     1501 acgtgttgct tgcacaacga atgtattgtg gtgaaaatgt ggtgtggagt ggaatgcctg
     1561 gaggatatgg gatgatgggc atgatgtacg gcaactgggg atggtttttt ctatggttct
     1621 tctggatact tctctttata attatttttg cagcagtctt tgcgttagtg ttctggctag
     1681 tctggaaaag tttgaataag aagaaaagat aaagtgcggg ggcaaggatt cgaaccttgg
     1741 aatccactaa ggaacaggat cttaagtcct gcgcatctag tccttctttc tgaagattga
     1801 ccaggctctg ccacccccgc aatgagtagt aagaatcaaa tatttattta taagctttta
     1861 gtgagttctg cttatttttt ctaaatggta attctgagaa gcagccttca agtatgtgaa
     1921 agaaaataaa aaaagctgaa acctcgggag gtggtgtgta tgaggttcag ccttcgaatc
     1981 gtgttacaca aaactatcgc acaggcattt ataaaccaag ggaacacgta ttcttgaaag
     2041 agtttccata aagcttataa gtgacctact tttgcagtag tagcaatgat cttagtgcta
     2101 aatggaccat actggttccg agggtttgat gcgattctgg ggatactctt tgcattaatc
     2161 acatttctca tcgctgctgt tagctataag gcgtacaaga tcacagaaga aaaaaagtat
     2221 tcctacttta gtgtctcctt ttttcttatg agccttgcct tttttttaac gggcattttt
     2281 gaagtttttc tcactaccca tgtatgggat ctgctcagcc aatggttgtc gcagtttgac
     2341 cttgtgttct tagcgcatat gctcctcatc ttcctcgcgt acgtttcctt attgattatc
     2401 acgttaaaaa tcacggacag gaaagtgatt gcgttgctct tcagtctcat cttgcttttt
     2461 actctcttct cttaccagta ttatttgaag ttccatatca tatcgtttct cctacttttc
     2521 tttttgagct accagtttta cacaaactat cttgagaaaa aacagttcaa tgcaaaattg
     2581 gtgttcatag cattttatct cttaacgtgc gcagaagttt ttttccttgc aatcatgtac
     2641 gaccaagtct tatacgtcgt cggtgcattg ttgcagttgt taggatacat tttgcttttt
     2701 tatgtgtttg ttcaggtggt gtaccatggc gggacgaaga gaaaaacttg atatcataaa
     2761 ggacatcctg gaagcaatca gggacaaggg cgggaaaatt aagcccacgc acttgttgta
     2821 caagtccaat ctctctcacg attccatgaa acgctatgtg caagagctcg tcgagaaaga
     2881 catggtccag gaaattgaag aaaagaaaga gaataaaaag tacgtgatca cggacaaggg
     2941 cctgaaattc ttgacagatt acaggcagat aaaagagttc actgatagtt tcgggtttta
     3001 agatgaacga gaaaagagta cgatatattc ttatgggaac acagcagcga gtttttctgt
     3061 aggtttatca ctttattttg gtgcaatgtc atatctggga gagaaaagat tcgagtgggt
     3121 gtacaagacc tcgccggagt ttctggagca actacaaaag gcaaaagaag aagtgcttga
     3181 tgaggcaatg aagttagtgt ttgatgaggc gataaggtta cggacctatt ttattcgaga
     3241 acgaaaacgg cttgagaaac cagacgaaaa tctgaattaa ttatctttta tttcttagtt
     3301 ttttggaggt attatttttc ttcttctgat gtaatagtct atacgttgca atacccataa
     3361 tgcctatgat cagcacgaca atggctccag tagatgcaga cgttttaaaa tcaagtgtac
     3421 ggaggaaagc agatgatact tttgtagcgg gcatacagac tccctcgctg catacatacc
     3481 cactcccaac attagaacaa tcgatatcct ctgacttaat ttccatcgcg gagagataat
     3541 attcacgcaa gtacccctta tacatgccgt atggaatgca tgtatccgct ttagtggttg
     3601 ttacccccga agaaatcgcg gtttccgtgc tgttttcaat gtaagttgta gttattttca
     3661 caagaccggc aacggtgtat tcttgtccac tgtcgctttc tgaataggaa aaggaagaac
     3721 tgacatcatc tgcttcataa catgttctcg tattaatatc acaggaatta cagtaatagt
     3781 tctgcgttgc acttagaaga ccattgcagt agtattccgt aacaatatat ctatcaacat
     3841 gactcctaca gatatcgctg gacgtgaagt agccatcagt ggtatcgtca tataccttga
     3901 gcgtgccatc aatagtggga ttgttgccat tatctgattc tgtacagttt tctactgcaa
     3961 gagcagcatg tagactgaga acaaagaaca agccgataaa aataagcaat ctttttttca
     4021 cacatgccac cttttcttgt ctaagagaaa ggacggctat atttttaagg ctttcgtaga
     4081 aaaatgactt gtcgcaatag tttcaaagac caagtgcttt attttaatga ttgagccaaa
     4141 aaaaacagtc ggtaggacaa tgagtaaaaa acgttttagc attataaaat ttatgacaaa
     4201 actttttgag tttatgggag tcttcccaaa atattatgca aaactttaaa tagaaaagac
     4261 ttcaattaaa tatctataaa aattgggtgg tgcattgtat gaaaaggctt tattctttgt
     4321 tagttctatt tcttatgttt ggcgcggtgt tcgtaagtgg tcaagagaat gctacgaatg
     4381 gcacgagtgg aggtacaggg accctcgcat gtacagatac ggacggcggt aatgacccgt
     4441 atactctcgg atcaacgacg acgaatgcaa gtacaggata ttttttccct gagtcttgtc
     4501 gagcagtgta tggtgcaaat attatgcagg aatttttctg taatgcgtct gcttctattg
     4561 gtgcttcagg aataagttat tactgtgatt cttgtggatc tccaacttat tgcgttccct
     4621 caacacagat tagaaatgag gttgtttaca cagattctga tggagggatt agccctttaa
     4681 tctatgggga gcttactctc acgacatcgc attatgaaaa tagtaacgga aatctgattt
     4741 cgacaggcac gagcgtctat aatgatcaat gttcctattt tgggaataat ggtttattat
     4801 acgattggta caattataat gcagaaactg gatatggctt cacttttggt gcaaacttct
     4861 cccttgcaca gaaagtaatc aactgtagtc taacatatgg tccgagctat tcctgtgtct
     4921 ctggggcttg tttttcttca gtattaaata atattacact gagcaatgca actaatgtaa
     4981 cgctaagcaa tgttactatt accaacggaa caaacataac aactaccaca aatgtgacaa
     5041 atggcacaac agggaatatt acggggaatg tttctgctcc aggagagaac gtcacagaag
     5101 ctcctaaaga aaacgtgaca agtcctggcg ggaaaggata tggaaaaggt ggaaaaaaga
     5161 aatttcttgc ctatgaaacc aaatctctat caatggaagc tggtgttacc ccggacagca
     5221 cactttattt ctttgacgtt gcattagaca gaattgcttt gaacttagca agaaacccgc
     5281 agtcgcgtgc agagcgcgga cttcttattg cacaggaacg gctccttgaa attgaagagc
     5341 tgatagcaga aaagaaattt gacaaaatct ggcgcgcaca ggacgagcat aagaaagcgc
     5401 ttgcagacgt agaacttgca gcagaagaac tagaagaaga tgatgcgtca gaagagcttc
     5461 aaggcaaagt ggaacttgaa ttgaaagtga aagaatatca agaccgtcta gagaacacag
     5521 aggcagagct tgaggaaaaa ctcgcagaag gagagctcac gctggtagat tggcaacagg
     5581 tatcagctat tgtttctgaa gtgaggagtc aagcatatgc tctgcaagga aaagtgcagg
     5641 aagaaaaaga aaaaacagaa gtaaaagtag agcaggaagg cttggatgca gaagatattg
     5701 aaaaagaaat taaggacgaa gttgggttcg ttcctgaaga aactgacgtg gtgaagtggg
     5761 gtgcagctgc agaaactgaa gaggaaacag aagaaactaa aggcgaagca aaggctgaga
     5821 aaaaaggaga tgaaggagca ggaccgagag aggcacccgc agtagaatct agtgaaggta
     5881 caacagcgag cgattctgga gagagtgcat cagcagatgc gggagcaagt tcttcagggt
     5941 ctagcagtgg tgggtctagt gcttcaagtg gctcgagcag tggtggcgga aagagtgctg
     6001 caagtagtgc gggagcatca gcagg
//
LOCUS       DATDZU010000007        20078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1408199, whole genome shotgun sequence.
ACCESSION   DATDZU010000007 DATDZU010000000
VERSION     DATDZU010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 20078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20078
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408199"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..637)
                     /locus_tag="VJJ79_00165"
     CDS             complement(125..637)
                     /locus_tag="VJJ79_00165"
                     /inference="COORDINATES: protein motif:HMM:NF003239.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HLC22172.1"
                     /translation="MVTIRPFSCYRKVKRAYTRKSRYKVQSYVKTSPVCKISKFNFGD
                     NKRIFSHKVFLVSKQRIQVRHNALESARTSVVRRLTENLGNNYHLQVRSYPHHVLREN
                     KMITGAGADRMQTGMQRSFGAPIGLAAQLKPKTPIFCVYVEKSGIDHARMALKSAIHK
                     LPCKCAIEVV"
     gene            complement(639..863)
                     /locus_tag="VJJ79_00170"
     CDS             complement(639..863)
                     /locus_tag="VJJ79_00170"
                     /inference="COORDINATES: protein motif:HMM:NF003326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35ae"
                     /protein_id="HLC22173.1"
                     /translation="MSRQYTRHIIISLPKVDSREKAQAYVGKKVVFKTTSGKQITGEI
                     SAPHGNKGCVRALFERALPGQCLGTVIEVQ"
     gene            complement(884..2731)
                     /locus_tag="VJJ79_00175"
     CDS             complement(884..2731)
                     /locus_tag="VJJ79_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22174.1"
                     /translation="MVKKNSSPRKEKKEADEAFEHVRPGIELPKFSPEMEARVKKIQD
                     KLDKFRAMCLEKIPNITGMSLLPPLKPRQGETVNPDEIHIFMLIDDAPTEFPKKGELI
                     LKTTEDATKIAEEIDKNFKPQVMLIAELKEACFDAKYDIIQMVASSGIFYDKGLLSAL
                     KVADFHKTMTVKKFEKYVASYIAVGSLFRGDAAPNDIDVAIVIDDTDVKKMSRLELRE
                     KLRTIILNMGYDASQQTGVRAQFHIQTYILTDFWENLRDANPVIFTMLRDGVPLYDRG
                     IFMPWKLLLQMGRIKPSPEAIDMNMEVGDRLLERTKQKLLSVVGEDLFYAVMNPTQAA
                     LMLYGIPPPTPKEAVQLMDEIYVKKEKLLEKKYIEILEKIRKTFKDIEHGEIKEVTGA
                     DIDRLLKDCKDYLERIKQLFNEIRERQERETMFDIHTTSINLARDLLGELGVKEVTVG
                     KLPELFKKHVCDGERLPVKYYNTLNEIIDAKKEYEKGKITKQELNKVRRDAREFIRVI
                     MDFLDLKRTAKFDKLTIRFTYDINKTGELLLLENIAFLIRDLNQREKIEIVQVDNDGC
                     LVDVKKSSVGEFEKYIKHVRVPPSRIIKPRTLETLKTIMGEDIGVLWKV"
     gene            complement(2801..3400)
                     /gene="rpsG"
                     /locus_tag="VJJ79_00180"
     CDS             complement(2801..3400)
                     /gene="rpsG"
                     /locus_tag="VJJ79_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HLC22175.1"
                     /translation="MSTIKLFNRWDTSGIKIQDPGLVGYVNLRPIIIPRTCGRNVKTQ
                     FWKSKNHIVERLINKIMIPGHKGKKHKFTSGRCTGKAITAYKITENVLLALEQKTKKN
                     PVEVLVRAIENAAPREEITTIEYGGARYPKAVECAPQRRVDFALRLMIQGAYAASFAK
                     KRSFHYTLTDEIFKAYQCDQGSTAINKKLEVERQADASR"
     gene            complement(3397..3834)
                     /locus_tag="VJJ79_00185"
     CDS             complement(3397..3834)
                     /locus_tag="VJJ79_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012965270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HLC22176.1"
                     /translation="MGKKSNGLNAGTKLVKRRKISRMLDKNFKRRLFNMKVKSDPLRG
                     SSQARAIVLEKIQLEAKQPNSAMRKAIRCQLIKNGKKVTAFVPGMGAIKMVDEHDEVI
                     IECIGGKMGRAKGDIPCVRWQVIKVNDQSLNALIRGKIEKGRR"
     gene            complement(3877..4461)
                     /locus_tag="VJJ79_00190"
     CDS             complement(3877..4461)
                     /locus_tag="VJJ79_00190"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLC22177.1"
                     /translation="MINYSTAERYVLDLLSRELSPKLFYHNVSHTVDVITAAEHLAQM
                     EGIAGDLLLLLKTGALFHDTGFIKQYGINEPIGARMAFTMLPGFGYARQEVHIVEKLV
                     LATQPHHIPKTKLEKIIRDADHDNLGREDFYIKTELLRQELAAHSVPHTQREWFTGVL
                     SFLKRHQYWTHTAVELRQGRKEQYIKEIEDLLGQ"
     gene            4518..4796
                     /locus_tag="VJJ79_00195"
     CDS             4518..4796
                     /locus_tag="VJJ79_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22178.1"
                     /translation="MEDLLTRLMILIYGAGVWSLYGFGKRGEDVAYQFSYHGLEATVV
                     REDIRGRWDNYYLKFPDGNAIIAGNFISDDGKKIYLSSEGYFVKLLEE"
     gene            4839..5345
                     /locus_tag="VJJ79_00200"
     CDS             4839..5345
                     /locus_tag="VJJ79_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22179.1"
                     /translation="MPDTRDGKVYYSFEEIGRLTCKIVDEIARQHVSIDVIVAISTVG
                     WIPGLLLKKILSTKERPIPGYSIGIANYDEQNNMLPYPVLYQPLPSSVQFQNKSVLLI
                     DEVADSGKTFVKAREHVMSFTPRGLYTAVLHHKELSMFAANFIGEHVGEKWIVYPWEE
                     FTPQKPVP"
     gene            complement(5320..5724)
                     /locus_tag="VJJ79_00205"
     CDS             complement(5320..5724)
                     /locus_tag="VJJ79_00205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusA-like transcription termination
                     signal-binding factor"
                     /protein_id="HLC22180.1"
                     /translation="MISYDTEIIGFITYFEKATGTTVKDCFHEGDVLVVVVQPGQLRK
                     ALAHHGEKIRNVSALTQKKIKLIEFNPEIEQFILNLLYPLKPKVFVTENSVVIKTQDI
                     REKGQVFGREKTNLKRIQGIVNKYFKVQVSVE"
     gene            complement(5728..5982)
                     /locus_tag="VJJ79_00210"
     CDS             complement(5728..5982)
                     /locus_tag="VJJ79_00210"
                     /inference="COORDINATES: protein motif:HMM:NF013417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HLC22181.1"
                     /translation="MSIEKLKKILKEKEVTVGTNETLRKVKGGKVSTVFIAKDCKPLV
                     RKQMEHYAKLKAVELLGLDVTAAELGTICKKQYPVSILSY"
     gene            complement(5979..7145)
                     /gene="rpoA2"
                     /locus_tag="VJJ79_00215"
     CDS             complement(5979..7145)
                     /gene="rpoA2"
                     /locus_tag="VJJ79_00215"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit A''"
                     /protein_id="HLC22182.1"
                     /translation="MIDELAKQYEGKLPAPLLDEVKKETRKVKLTKDQLERVFKNLEE
                     KYLYAKIQPGEAIGIVTAESFGEPGTQMTLRTFHFAGVAEVNVTLGLPRLIEIFDARK
                     EPSTPLMHIYLKKPHNKDKKNLERIIAQIKEIKMHEVLSEISINLLKLNIEFVFNKTR
                     MRELGIQEEETVKAVKDMLKTVDMSVKDSVYIVAPKTKEGEATSTLPLLYTLKEKIKA
                     VKIKGIIGVTEVIPKMEDDEIILLATGANLKEVFKVEEVDYTRTTTNHLFEVSKNLGI
                     EAARQIIIDEASKVIQEQGLDIDIRHIMFIADLMTSRGDIKGVTRSGITEHKESVLAR
                     ASFETPIRHLINASLKGEVDYLKSVVENVMINQPIPLGTGMPKLVVKGTGSSEK"
     gene            complement(7142..9697)
                     /locus_tag="VJJ79_00220"
     CDS             complement(7142..9697)
                     /locus_tag="VJJ79_00220"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit A'"
                     /protein_id="HLC22183.1"
                     /translation="MENVYKKVDNIKFSLFSPQQIKKIANVKVVTPELYDKEGYPVEG
                     GLMDTRLGVIDPGLRCRSCNGKLKECLGHFGYIELGRPVLHISYMKVIYIFLQSTCKD
                     CSRLLLPEETIKRYAEKYEAYKKSGRLGGIQKINKVVRAATRGVHKCPHCKAKLETVK
                     FEKPSTFYEETKRVTPIEILERFEKIPDIDCGLIGVDPVSARPEWMILSIFSIPPVTM
                     RPSITLETGERAEDDLTHKLSDIVRINQRLFENINAGAPEIIVEDLWDLLQYHVTTFF
                     NNDIAQVPPARHRSGQPLKTITERIKSKEGRFRHNLAGKRVNYAARTVISPDPKIELN
                     EVGIPFLIAMELTVPERVTEWNLEWLKSFVANGPKKYPGANYVLDGMKKKKISPETQE
                     VILNELIPGQVVERHLLDGDVAIFNRQPSLHRMSIMCHKLRVLPGKSFRLNPSVCNPY
                     NADFDGDEMNLHIPQTEEARAEAEILMEVETQIMSPKHGLNVIGCIEDAVTGNYLLTD
                     ENTVLPKSDAIPLLLSIGFDDIEKLKNFKKNVTGREIFSALLPEDMNFVYENVVIENG
                     KLIAGQIDPKTIGEGNGTLLRDIHRKYTEEQCVQLFGYIFKLGIAYLMRRGFTIRTAD
                     ADIPEEIRVKAKAVITTAMEEVDDIVAQYAQKKLKPFSGKTMEETVELNVMQKLNEAR
                     NAVGKLISKSVSEDNNAIIMSRAGKGNILNLAQTSVLVGQQVLRGKRIEKGYKNRTLS
                     LFKENDRGPEARGLVRHSYKKGLNPVEFFFHAMTGRDSLMDTALRTPKSGYLYRRLAN
                     ALQDLKVEYDGTVRDANDMVIQFAYGEDNIDVSRSENGTIDIKKIIEEASRKK"
     gene            complement(9703..11505)
                     /gene="rpoB"
                     /locus_tag="VJJ79_00225"
     CDS             complement(9703..11505)
                     /gene="rpoB"
                     /locus_tag="VJJ79_00225"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit B"
                     /protein_id="HLC22184.1"
                     /translation="MTDIYLNEKYVGTVESPREFTKHFVDERRKQKLPGAVNISYDQE
                     FNEISIHTAMGRVRRPLIVVENGTPLVTKEHLEKLEKGDIHWQDLVDQGVLEYLDADE
                     EENAYVALTEKDITKEHTHMEIDAIAILGLTTALVPYANFGQSSRLNRGSKTQKQALG
                     LYASNYLLRMDTDISVLQHPQVPIVRTFMHDIAKYDKHPSGQNVTIALLSYDGYNMQD
                     ALIMNGGSVQRGFARSFYFRPYDAEELRYQGGLVDEISVPDKEVKAYRSEEDYRFLEE
                     DGIISPEVRVGEDDVLIGKTSPPRFLGEMEEFSIAANTRRESSIAVKHGEHGVVDMVV
                     ITENEEGNKLIQIRLRDERIPEPGDKFASRYGQKGVIGRIVPQADMPFTASGIVPDII
                     FSPHSLPSRMTISHLIEVIGGKVGALGGRYIDGSTFSAESEKDLREQLLQLGFRENGT
                     ERMYNGITGEEFESTIYVGNMYYLKLKHMVANKMHARASGKIQLLTRQPIEGRSAGGG
                     LRLGEMEKDCLVAHGASLLLKERFDSDKTVVHICENCGLLAVYDWMRKTASCTRCGVS
                     AEVSAIEMSYAFKLLLDELRSLNIYPQLKLKNKY"
     gene            complement(11502..12992)
                     /locus_tag="VJJ79_00230"
     CDS             complement(11502..12992)
                     /locus_tag="VJJ79_00230"
                     /inference="COORDINATES: protein motif:HMM:NF007175.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit B''"
                     /protein_id="HLC22185.1"
                     /translation="MDKSKHLLVKKYFEDHSFIESSIDSFNRFIDIEMQKTVDEIGDI
                     IPTILPPEVQEFTIKFAKIWIEKPQITEADGSKRNIYPIEARLRNLTYAAPIFLEVSV
                     IIDGIQRESFTSQIGRIPIMLRSKYCHLYKLSEDELIEHGEDPTDPGGYFIINGNERV
                     IITVEDLMPNKIFFQENKVGPSKFTAKVFSQQGPYSIPHVIEQMKDGIFYLSFTKFKR
                     IPLFTVIKALGLTKDKDIMDAICDEKEYDDVYINLFNAAEIKVPDEAMELIAKKIGLT
                     QPREVKLEKTTEQLDHYLLPHIGITEKERLAKAYHLCKLAKKFLQIAIERKTMTDKDH
                     YKNKKLKLPGDLLADLFRVNMRVLVNDILYNFQRLVKRGKFQSVKIIIRDKLLTSRLK
                     SAIATGAWVGGRRGISQNIARVNYLDTLSHLGRVASLLSATQENFEAREIHSTHWGRL
                     CPIETPEGTPIGLRKNIAMLARVTQEEVSDDKLKRSLENLGVKLVK"
     gene            complement(12985..13227)
                     /locus_tag="VJJ79_00235"
     CDS             complement(12985..13227)
                     /locus_tag="VJJ79_00235"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010885626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit H"
                     /protein_id="HLC22186.1"
                     /translation="MSVGVDVAKHILVPEHSKLTDEEAKASLEKFHISKRQLPRIHKT
                     DPAIRDLNPEQGDVIKIVRKSATAGKSIYFRVVING"
     gene            complement(13269..13388)
                     /locus_tag="VJJ79_00240"
     tRNA            complement(13269..13388)
                     /locus_tag="VJJ79_00240"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            complement(13392..13466)
                     /locus_tag="VJJ79_00245"
     tRNA            complement(13392..13466)
                     /locus_tag="VJJ79_00245"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13428..13430),aa:Asp,seq:gtc)
     gene            complement(13452..13577)
                     /locus_tag="VJJ79_00250"
     CDS             complement(13452..13577)
                     /locus_tag="VJJ79_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22187.1"
                     /translation="MNRSFYVPKADTLQYLSLKTLHEQAIMQCAHRGLYVAALVV"
     gene            complement(13761..15098)
                     /locus_tag="VJJ79_00255"
     CDS             complement(13761..15098)
                     /locus_tag="VJJ79_00255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase J family beta-CASP ribonuclease"
                     /protein_id="HLC22188.1"
                     /translation="MDIEIFGLGGYSEVGMNMTAIRVGDDVIICDMGFYLPEVIRLQD
                     EDVVKTKLSREDFIQHHIIPDDSVLEGLRGNVKAIILPHCHLDHIGAVPLLAKRYNCP
                     IYGAPYTLEVLKSILLDEDVHIPNKLNVLQDGDRVKISENITLEFMEIPHSTPQTMMA
                     IIHTPKGIVLYGNDFKLDNDPTLGRKTNYKRLREIGAQGIKVFIVDSLYAYEEVKTPS
                     ERLAREMLKDVLLSTENKGKLVIVTTFASHIARLQATIEFARTMGRKVVILGRSMDRY
                     ISAAENIRMVNFSKRASIARYTREVRKMLTEVQKNPGKYVVICTGHQGEPRSILMRMV
                     TGELPYKFSAGDQVIFACKTIPVPINIANRAALETKLKQKGVRLFKDIHASGHLARED
                     HHDLIKLLHPQHIIPCQGDVSKLMPLAELAEELGYKYGKTVHVMRNGQSVLLE"
     gene            15242..15610
                     /locus_tag="VJJ79_00260"
     CDS             15242..15610
                     /locus_tag="VJJ79_00260"
                     /inference="COORDINATES: protein motif:HMM:NF025610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4346 domain-containing protein"
                     /protein_id="HLC22189.1"
                     /translation="MDTVKARPAWVKDKNVAEDFEVIDVPRWDDIKDFIFDKEGCYVL
                     IKIYRETHDIGVAICNQQHVILKEFRGRRTQDIYSFIFTYDREHKKGWFNVVDHAAYL
                     GKELKKAEIALALGYDYYQE"
     gene            15623..16555
                     /locus_tag="VJJ79_00265"
     CDS             15623..16555
                     /locus_tag="VJJ79_00265"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HLC22190.1"
                     /translation="MVHTENERKEELSYYYEKNYERHVHSAAEIIKVFHLHGTIPAFG
                     IVLGSGLGDVADAIEDAHRVPYEDIPYFPRTTVEGHEGTLIVGKLEGVPVIGLKGRKH
                     YYEVADQLYNNGILQTVFPVHVLAELGVPNYFVTNAAGGLNQSYSVGDAMIIRSHINL
                     LPNSLLGRQKKFLRLDGTPVWRFQPMNDAYDPHLREMLLNQNRFGPHVHEGVYLAVTG
                     PTFETEAESIAFRNGLFADAVGMSTAPEVIVARNRGMKAVGFSCITNKIAADGTNATN
                     HEEVKAILDSEDVRKRLESLVCGFFAEYRKESGL"
     gene            16579..17007
                     /locus_tag="VJJ79_00270"
     CDS             16579..17007
                     /locus_tag="VJJ79_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22191.1"
                     /translation="MLSWKNLVQSIAGISTLFALPYGITYVNCLRNHTVLQDFPVYSS
                     PENFSRDFAIEKHKLGIENVIVTTEFPYTEPSAHTQRITDHTYIISFNPNYARKVVLR
                     HELYHVKQLEKSSFLFPKSAPLNCLSEWAATSYALKEKGL"
     gene            17032..17403
                     /locus_tag="VJJ79_00275"
     CDS             17032..17403
                     /locus_tag="VJJ79_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22192.1"
                     /translation="MSEKEGGLEKSLGYEVTVSHPNGQTYVLCVDTERKIRGWYLDGY
                     RRYLSDWELWNHKDGLGILKGELQQGKSVLVDENIFTANGNTAEAYLVIRVEEVDIEE
                     MTKYHYIAGLDYPIFLPEYEN"
     gene            17480..17965
                     /locus_tag="VJJ79_00280"
     CDS             17480..17965
                     /locus_tag="VJJ79_00280"
                     /inference="COORDINATES: protein motif:HMM:NF020972.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HLC22193.1"
                     /translation="MSNFVPDYAFANVLSIDKRLFRGKELIIFDVDNTLFYPESTKIR
                     PEILFWFKDVNKKYQCVCLSNSHTIQQRKDAISSILGCEIFMSDYRKPSKKLFMQIVR
                     KYQVDPKKILVIGDMQLTDVLFGNRNNATTILVKPMSTKELFSIRVVRTFEGLLFGRK
                     K"
     gene            18018..18707
                     /locus_tag="VJJ79_00285"
     CDS             18018..18707
                     /locus_tag="VJJ79_00285"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HLC22194.1"
                     /translation="MVDTFQSKIIEKKWLTKDVLLLSITVPEYFDFKAGQYVMFKMTV
                     DGMTKLKPYSILSPPSQKGQLDFCIKIIDGGHASESFKVLNIADELTVKGPFGHFVMQ
                     TDSPCDEYWFIGTGTGIVPLYSIILEHLPKFSNKTFRLIFGVRKKEGLFLHDELKNLE
                     QRYPNFIFVPTLSQDTWELGIGRVQAQLTGDLQNKEFYICGLKEMVIETEAFLREKGV
                     PTHHIHFERYS"
     gene            18715..19095
                     /locus_tag="VJJ79_00290"
     CDS             18715..19095
                     /locus_tag="VJJ79_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22195.1"
                     /translation="MDAIKKETTKAPEEILKSLDTRLLAIENNTGQMKVVVRDLYARP
                     APENKSRPALYFMVWTTMLGVLCSGPCTPPMSAVGSYYGASKESLELHIENVVGAEEP
                     EKFYLINGQRAYLEIDGAPVEECF"
     gene            complement(19104..>20078)
                     /locus_tag="VJJ79_00295"
     CDS             complement(19104..>20078)
                     /locus_tag="VJJ79_00295"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22196.1"
                     /translation="GTISMLFDCASGIEPYYAVAFNRNLRGGDTLIYGNKHFERIARE
                     RGFYSKELLEKVKENHGSVQGMEQVPDGVQKLFRTAHDISYDWHVRIQAAFQRGTDNA
                     VSKTINMRNDATVEEVKGAYLLAYNLGCKGITVYRDGAKKVQVLQTMERKVEGVLEDQ
                     LRSPRPDHIGGLTEKLETPFGTGFLTFNRAKENGGLGRPYEAFLSIGRGGQDIAAIAE
                     GLGRLMSLGLKAGVPPGMIIEQLRGIGGETQTGFGSKRVRSLPDGVALALESILRKEG
                     INAINGNSGVKNDQKFSGNFCQECKSQMIFEEGCMKCTNPTCGYSKCG"
BASE COUNT         5222 a         4387 c         4047 g         6422 t
ORIGIN      
        1 aagaacattt cttggagttc caagaatcgt attaactttt ttcgcatttc cctttaaaac
       61 ggtttcggtg tttttaaaga tttatgtcgt atcttgtata ggttaagaaa aatatttact
      121 gggattatac tacttctatc gcgcacttgc atggtaattt atgaatcgct gatttcaatg
      181 ccatccgtgc atggtcaatt ccactttttt ctacatagac acagaaaatt ggtgtcttgg
      241 gcttaagctg tgcagcaaga cctatcggcg caccaaatga gcgttgcatt cctgtctgca
      301 tccggtctgc tcctgctcca gtaatcatct tgttttcacg aagcacgtga tgcgggtaac
      361 tgcgtacttg caaatggtag ttgtttccaa gattctctgt aaggcgtcgt accactgacg
      421 tccgtgcaga ttctagtgca ttgtggcgaa cttggattcg ttgctttgaa acgagaaaaa
      481 ctttatgcga aaatattctt ttattatcac caaaattaaa ttttgaaatt ttacagacag
      541 gagatgtctt tacataactt tggaccttgt atcgagactt tctcgtgtat gcgcgcttga
      601 cttttctata acaagaaaat ggacggattg taaccatgtt actgcacctc tattactgtt
      661 cctaagcatt gaccaggcaa cgctcgttca aatagtgcgc gaacacaacc cttgtttcca
      721 tgtggtgcac taatttctcc agtgatttgt tttcctgatg ttgtcttgaa caccactttt
      781 tttcccacat aggcttgtgc tttttctcta gaatctacct taggcaagct aatgataatg
      841 tgtcgggtgt actgtcgcga catacttctc cgatagttgt taattatacc ttccataaga
      901 cacctatatc ttcacccatg attgttttaa gcgtttctaa tgttcgtggc ttgataatcc
      961 tactaggagg cactctcacg tgctttatat atttttcgaa ctcgcccacg ctactttttt
     1021 tgacgtccac aagacagccg tcattgtcca cctgtacgat ttctatcttt tctctttgat
     1081 tgagatctcg gataagaaac gcgatgtttt ctaatagtaa aagttcccct gtcttgttta
     1141 tgtcgtaagt aaagcggata gtgagcttgt caaactttgc tgtacgtttt aaatccaaaa
     1201 aatccatgat gacgcggata aactcgcgtg catctcttct tactttgttc aattcttgct
     1261 tggttatctt gcctttctcg tactctttct ttgcatcaat tatttcgttg agcgtgttgt
     1321 aatatttcac tgggagacgc tcgccatcac aaacatgttt cttaaatagt tctggaagct
     1381 ttcccactgt cacttctttg acgccgagct ctcccaaaag atcgcgcgcg aggttgatac
     1441 tggtagtgtg aatatcgaac atggtttctc gttcctgtcg ttccctgatc tcgttgaaca
     1501 attgtttgat tcgttccaaa tagtccttac aatctttcaa gagacgatct atgtcggcac
     1561 cagtgacttc cttgatttcg ccgtgctcaa tgtctttgaa cgtttttctg atcttctcaa
     1621 gaatctcaat atattttttt tcgagcagct tttctttttt gacataaatc tcgtccatta
     1681 actgaactgc ttcctttggc gtgggcggag gaatgccata caacatcaag gctgcttgtg
     1741 ttgggttcat gactgcataa aatagatctt ctccaactac gctgagaagc ttttgtttgg
     1801 ttctctctaa caatctatct cccacttcca tgttcatgtc gattgcttct ggtgacggtt
     1861 tgatacgccc catctgaagc aagagtttcc aaggcatgaa gatgcctcga tcatacaacg
     1921 gaacgccgtc tctaagcatg gtaaatatga ccgggtttgc atccctgaga ttttcccaga
     1981 agtctgtaag aatgtatgtc tggatatgga actgtgcgcg cacgccagtt tgctgcgatg
     2041 cgtcatagcc catgttgaga ataatggttc tgagtttttc tcgtaactca agacgagaca
     2101 ttttttttac atcagtatca tcaatgacaa tagcaacatc aatgtcgtta ggtgcggcat
     2161 cgccacggaa taatgaccct acagcaatgt aacttgcaac atatttttcg aatttcttaa
     2221 cggtcattgt cttgtgaaag tctgcaacct ttaatgcaga gagcagacct ttgtcataga
     2281 aaatgccaga gcttgccacc atctgaataa tatcatactt tgcatcaaag catgcttcct
     2341 taagttccgc tatgagcata acttgtggct tgaaattctt gtcaatctct tcggcaatct
     2401 ttgttgcgtc ttcagttgtt ttgagaatca attctccttt tttaggaaat tctgttggag
     2461 catcatcaat tagcatgaag atatggatct cgtcagggtt gacggtttct ccttgacggg
     2521 gctttaatgg tggaagcagg gacatgccag tgatatttgg aattttttcc aagcacattg
     2581 ctctgaattt gtcgagcttg tcttgaattt tttttactcg ggcttccatc tctgggctga
     2641 attttggaag ctcgatacct gggcgcacat gctcgaacgc ttcgtctgct tctttctttt
     2701 ctttcctggg agaactattc ttttttacca ttggaacgag tacaaagacc gagcgggtat
     2761 ttataaaggt ttgggtaatg tttgagaaaa ataaaaagat ttaacgagat gcatccgctt
     2821 gccgttctac ttctaacttc ttgttgatcg cagtgcttcc ttggtcacat tgatacgctt
     2881 tgaaaatttc gtccgttaac gtgtaatgga aagaccgctt ctttgcaaat gacgctgcat
     2941 aggcaccctg tatcatcaac cgcaatgcaa aatctacccg tcgctgcgga gcacattcca
     3001 ctgcctttgg ataccgtgcg cctccatact caatcgtcgt aatctcttcc cgtggagcag
     3061 cgttttctat tgcacgcaca agtacttcca caggattttt tttagttttt tgctctagag
     3121 caagaagaac attctcagtt atcttgtatg cagtaatcgc tttccctgtg caacgcccag
     3181 atgtgaactt atgcttcttt cccttgtgac caggaatcat aatcttgttt atcaaccgtt
     3241 ctacgatatg gttctttgat ttccaaaact gggttttcac gtttctgccg caggttcgcg
     3301 gaataataat cggacggagg ttgacatagc cgacaagacc tggatcttgt attttaatgc
     3361 cagacgtgtc ccatcgattg aaaagtttta tcgtactcat cgtcgtcctt tctcaatttt
     3421 tccacggatt aatgcattta aagattgatc atttactttg atgacttgcc agcgaacaca
     3481 gggaatgtca ccttttgcac gccccatttt tccgccaatg cactcgataa tcacttcgtc
     3541 gtgttcgtcg accatcttga tcgcgcccat gcctggtaca aatgctgtta ctttttttcc
     3601 gttcttaatc agttggcacc ggattgcttt ccgcatggca gagtttggct gctttgcttc
     3661 gagctgaatc ttttcgagaa caatggcacg tgcttgggaa ctgcctcgca aaggatctga
     3721 cttaactttc atgttaaaca accggcgctt aaagtttttg tcgagcattc ggcttatctt
     3781 tcttcgcttt acaagcttgg ttcctgcgtt caatccgtta cttttctttc ccatttttct
     3841 gttgtagtga aatctaatag tttttaaagg tttctgttat tgtcctagaa ggtcttcgat
     3901 ttctttgata tactgctctt ttctgccttg ccgaagctcc acagctgtat gtgtccagta
     3961 ctggtgccgt ttaaggaaag aaagcacgcc cgtgaaccat tctctctgtg tatggggaac
     4021 gctatgtgcc gctaattctt gccgcaacag ttctgtcttt atgtagaaat cttctcgccc
     4081 taagttatca tgatctgcat cgcggataat tttttctagc ttagtttttg ggatatgatg
     4141 tggttgcgtt gcgagaacta atttttcaac aatgtgcact tcttgtcttg catagccgaa
     4201 tcctggaagc attgtaaaag ccatccgtgc accaatgggt tcgtttatgc catactgttt
     4261 tataaatcct gtgtcgtgaa agagtgcacc ggtttttagc aagagtaata aatcgccagc
     4321 gattccttcc atttgtgcaa gatgttctgc tgcagtaatt acgtcgacag tatgagaaac
     4381 attatggtaa aataattttg gtgataactc tctcgacaaa agatcaagaa cataacgctc
     4441 tgcagtagaa tagtttatca tatgaagcgt tctggagact caatattttt atatactttt
     4501 ggtttttatg ttgccttatg gaagatttgc taacgcgact gatgatattg atatatggtg
     4561 ctggtgtttg gtcactttat ggttttggaa aacgcggcga agacgttgcc tatcagtttt
     4621 cataccatgg gcttgaagct acagttgtca gggaagatat tcgtgggcgt tgggataatt
     4681 actatcttaa atttcctgat ggtaatgcca taattgcggg aaattttata tctgatgatg
     4741 gtaaaaaaat atatctctct tcagagggat attttgttaa gctattagaa gaataaaatc
     4801 ccgaaaagct tatatgtttc ttaggatata ttttttgcat gccagacaca cgagatggaa
     4861 aagtctatta ttcttttgaa gaaattggta gattaacatg taaaattgtt gatgagattg
     4921 ctcggcagca tgtatctatc gatgttattg ttgcaatctc aactgtggga tggatcccag
     4981 gactactact aaaaaaaatt ctctctacga aggaacgacc gatacctggg tatagtattg
     5041 gtattgcgaa ctatgatgaa caaaataata tgctcccata tccggttctt taccaaccac
     5101 ttccttccag tgtccaattt caaaataaat ctgttcttct cattgacgaa gttgccgatt
     5161 ctggaaaaac atttgtgaaa gcaagggaac atgtgatgtc ttttactccg agaggattat
     5221 acacagcagt tctccatcat aaagaattaa gtatgttcgc tgcaaatttt atcggagaac
     5281 atgttggaga aaaatggatt gtctatccgt gggaagaatt tactccacag aaacctgtac
     5341 cttaaaatat ttgttaacaa tcccttgaat tcgtttcaaa tttgtttttt ccctgccaaa
     5401 gacttgccct ttttctcgga tatcctgtgt tttaatcacg acactgttct ctgtaacaaa
     5461 cacttttggt tttaacgggt acaaaagatt tagaataaac tgttctattt ctggattaaa
     5521 ttcaataagc ttaatctttt tctgtgttaa ggcactcaca tttcgtatct tttcaccatg
     5581 atgcgctagc gctttcctca actgccctgg ctggaccacg acgacaagta cgtcaccctc
     5641 gtgaaaacaa tccttcaccg ttgtacctgt tgccttttca aagtaggtga taaagccaat
     5701 aatttctgta tcatacgaga tcatttttca gtaggataga atgctcacag ggtactgctt
     5761 tttacagatg gttcctagct ctgctgctgt aacatcaagg cccagaagct caaccgcttt
     5821 cagctttgca taatgctcca tctgttttcg cacaagcggc ttgcaatctt ttgcaataaa
     5881 aacagtggac acctttcctc cttttacttt tcgtaacgtt tcatttgttc ccacagttac
     5941 ttctttctct ttcaggattt tttttagttt ttctatgctc atttttcact actccctgtt
     6001 cctttgacca ctaattttgg catacctgtc ccaagtggaa ttggctggtt gatcatgaca
     6061 ttctcgacga cagatttcaa gtagtctact tctcccttca agcttgcgtt aattaaatgt
     6121 ctaatgggag tttcgaacga tgcgcgcgca agcacggatt ccttatgctc tgtgataccg
     6181 ctccgcgtta ctcctttaat atctcctctg ctcgtcatga gatctgctat gaacatgata
     6241 tgacgaatat ctatatcgag cccttgttct tggataacct ttgatgcttc atcaattatg
     6301 atctgccgcg ctgcttcaat acctaagttc tttgaaactt caaagagatg gttcgtggtg
     6361 gttcgtgtgt aatctacttc ttcaaccttg aacacttcct tgagatttgc tccggtagca
     6421 agcaatatta tttcgtcatc ttccatctta ggaataactt ctgttacgcc gatgattcct
     6481 ttaatcttga cagccttaat cttttccttc aacgtgtaca agagaggcag tgtactcgtt
     6541 gcttcccctt ctttcgtctt cggtgcaaca atatagacac tgtctttcac gctcatatcg
     6601 actgttttca gcatgtcttt gactgctttt acagtctctt cttcttgtat cccaagctcg
     6661 cgcattctgg ttttattgaa cacaaactca atattaagct tgaggagatt aatagaaatt
     6721 tctgaaagaa cttcatgcat tttaatctct ttaatctgtg caataattct ttcgagattt
     6781 tttttatctt tattatgcgg tttcttgaga taaatgtgca tcaatggagt gcttggttct
     6841 ttccgcgcat caaatatttc aatcaaacgg ggcagaccta acgtaacgtt gacttctgca
     6901 acccctgcaa agtggaacgt ccttaatgtc atctgtgtgc cgggctcacc gaaggattct
     6961 gcagtgacaa taccaattgc ttcccctggc tggatctttg cgtagaggta cttttcttcc
     7021 aagttcttaa acacgcgttc gagctggtcc ttcgtcaact tgactttcct tgtttccttc
     7081 ttcacttcgt ctaagagcgg cgccggaagt tttccttcat attgttttgc gagttcgtca
     7141 atcatttttt cctgcttgct tcctcaataa tctttttgat gtcaatagtt ccattttcac
     7201 tgcgagaaac gtcaatgtta tcctcaccat aagcaaactg gatgaccata tcatttgcgt
     7261 cacgcaccgt gccatcgtac tcgaccttta agtcttgcaa tgcatttgcg agccgacgat
     7321 agagataccc tgactttggt gtccgcaggg cagtgtccat cagagagtct cgtccggtca
     7381 ttgcgtggaa aaagaattcc acgggattca accctttctt gtaactgtga cggacaagac
     7441 cacgtgcctc tggaccgcga tcgttttcct tgaaaagtga gagcgttctg tttttgtatc
     7501 ctttctcaat tcgttttcca cgcaggactt gttgccctac taagacactt gtctgggcaa
     7561 ggttcaaaat gtttcccttt cctgcacggg acatgatgat tgcgttgttg tcctcagaaa
     7621 cagacttact gatgagtttt ccaacagcgt tccgtgcttc gtttagtttc tgcataacat
     7681 tgagctctac cgtttcttcc attgtttttc cagagaacgg ctttagcttc ttctgcgcat
     7741 actgtgcgac aatatcatcc acttcttcca ttgctgtcgt gattactgcc tttgccttta
     7801 cgcggatttc ttctggaata tctgcatcag cagttcttat tgtaaagcca cggcgcatca
     7861 agtatgcaat ccccagctta aagatatatc caaagagctg aacgcattgt tcttcggtat
     7921 atttccggtg aatatcccgc aaaagtgttc cgtttccttc cccaatagtc tttggatcaa
     7981 tctgacctgc aataagtttt ccgttctcaa taacaacatt ttcataaaca aaattcatgt
     8041 cttctggcaa gagggcagaa aaaatttctc gtcctgtgac atttttcttg aaatttttga
     8101 gcttttcaat atcatcaaac ccgatgctga gcaggagagg gattgcgtca cttttgggga
     8161 ggactgtgtt ttcatccgta agcaaatagt ttccagtgac tgcgtcttca atacagccaa
     8221 taacgttcaa tccatgcttt gggctcataa tttgtgtttc aacttccatc aatatctctg
     8281 cctcagcacg cgcttcttct gtctgtggaa tatgtaagtt catctcgtcc ccgtcgaagt
     8341 ctgcgttgta ggggttacag actgagggat tcaagcggaa tgattttcct ggaagtacgc
     8401 ggagtttgtg gcacataatg gacattctgt gcagggatgg ttgccggtta aagattgcaa
     8461 catcaccatc gagcaaatgt cgctccacaa cttgtcctgg tatcaattca ttgagaataa
     8521 cttcttgtgt ttctggacta atttttttct tcttcatgcc atcaagaaca tagtttgcac
     8581 cagggtactt ctttggaccg ttcgctacaa aactcttgag ccattccaga ttccattcag
     8641 taacacgctc tggcactgta agttccatgg caattaagaa tggaattcct acttcgttca
     8701 attcaatctt aggatctgga gagataacag tccgcgccgc gtagttgacc cgttttcctg
     8761 caaggttatg acggaaccta ccttctttgc tcttgattct ctctgtgatt gttttcaatg
     8821 gttggccaga tctatgccgc gcaggtggta cctgtgcaat gtcgttgttg aaaaacgtgg
     8881 taacatgata ctgcaagaga tcccaaaggt cctctacgat aatctctggc gcacctgcgt
     8941 taatgttttc aaacaaccgt tgattgatac ggacgatatc gcttagcttg tgcgtgagat
     9001 cgtcctctgc acgttcccct gtctccaagg taatggaagg acgcatagta actggcggaa
     9061 tagaaaatat tgagaggatc atccactctg gtcgtgcaga tactggatca acgccaatga
     9121 gcccacagtc gatgtcagga attttttcaa accgttcaag aatttcaata ggagtgaccc
     9181 gcttcgtttc ttcgtaaaat gtgctaggtt tttcaaattt tactgtttct aattttgctt
     9241 tacaatgtgg gcacttgtga acgccacgcg ttgcagctct gacgactttg ttaatttttt
     9301 gtatgcctcc aagccgccct gattttttgt acgcttcata tttttctgcg tacctcttaa
     9361 tggtttcctc tggaaggagc aaacggctgc agtctttaca cgtagactgg aggaaaatat
     9421 agattacttt catgtaacta atatgcaaga caggtcgtcc gagttcgata tacccgaagt
     9481 gcccgaggca ttcctttaac ttcccattac aggaacggca gcggagacca ggatcaatca
     9541 cgccgagacg tgtatccata agcccacctt caacaggata cccctcttta tcataaagtt
     9601 ctggtgttac aactttgacg tttgctattt tcttgatttg ctgaggtgag aacaagctaa
     9661 acttgatgtt atcgaccttt ttgtagacgt tttccatttt tttcagtact tgtttttgag
     9721 tttgagttgc gggtaaatat ttaatgagcg aagctcgtca agcaaaagct taaacgcgta
     9781 gctcatctcg atggcactaa cctctgcact gacgccgcag cgagtacaag acgcagtctt
     9841 gcgcatccag tcatatactg caaggagacc acagttttca cagatatgca cgactgtctt
     9901 gtcagagtca aagcgctcct tcaaaagcaa ggacgcacca tgtgcaacaa gacaatcttt
     9961 ctccatctct cctaatctga gtcccccacc agcgcttcta ccttcaattg gctgacgcgt
    10021 aagtaactgg atctttcctg atgcacgcgc gtgcattttg tttgcaacca tgtgcttgag
    10081 ctttagataa tacatgtttc caacgtaaat tgttgactcg aactcttctc ctgtgattcc
    10141 gttatacatt cgctctgttc cgttctctcg gaagccaagc tggagcaact gctcacggag
    10201 atctttctca gactctgcag agaacgtgct gccatcaatg taccgaccac caagtgctcc
    10261 gacttttccg ccaatgactt caatcaagtg cgagatagtc atacgagacg gcaatgagtg
    10321 tggtgaaaaa ataatatccg ggacaatccc tgatgcagtg aatggcatat ctgcctgtgg
    10381 cacaattcgt ccaataactc ctttctgtcc ataccgtgaa gcaaacttat cgcctggctc
    10441 agggattcgt tcgtcacgta acctgatctg gatcagttta ttcccttctt cattttctgt
    10501 gattacaacc atgtccacaa cgccatgttc accgtgcttg actgcaatgg aactttcccg
    10561 tcgtgtattt gcagcaatac taaactcttc catttcccca aggaacctag gcggagacgt
    10621 ttttccaatt aagacgtcat cttctccaac tcgcacttca ggggaaatga tcccgtcttc
    10681 ttcaaggaat cggtaatctt cttctgaacg atatgccttg acttctttat caggaacgct
    10741 aatttcgtcg actaaccctc cctggtagcg gagctcttct gcatcataag gacggaagta
    10801 aaatgatcta gcaaatcctc gctggacaga tccgccgttc atgatcaagg cgtcctgcat
    10861 gttgtagccg tcgtagctca gcaaggcaat tgtgacattt tgtccagaag gatgtttgtc
    10921 gtactttgca atatcgtgca taaaggtacg gacaattggt acttgcgggt gctggagcac
    10981 acttatatcg gtgtccatac gcaagagata gttgctggca tataaaccaa gcgcttgctt
    11041 ctgagtcttt gatcccctgt tcaaccgtga actctggcca aagtttgcat atggaactaa
    11101 cgccgtggtc aagccgagaa ttgcgattgc gtcaatctcc atgtgtgtgt gttcttttgt
    11161 tatatctttt tctgtgagcg caacgtaagc attttcttct tcatcagcat caaggtattc
    11221 gagaactccc tggtccacca aatcttgcca atggatgtcg cctttctcta gcttttccaa
    11281 gtgttctttt gttaccaacg gtgtaccgtt ctctacgaca atcaacggtc ttcggacgcg
    11341 acccattgcc gtatggatag aaatttcatt gaactcttga tcgtaactaa tatttacagc
    11401 acctggaagt ttttgttttc gccgttcatc tacaaaatgc ttagtgaact ctcttggact
    11461 ttccacagtc ccgacatatt tttcgttaag atatatgtca gtcattttac gagcttgacc
    11521 cccaaatttt ccaggctgcg cttcagctta tcatcagaaa cttcttcttg tgtgacacgc
    11581 gcgagcattg cgatattttt tcgtaatccg ataggtgtcc cttcaggcgt ttctatagga
    11641 cataaccgtc cccagtgtgt agaatgaatc tcccttgctt cgaaattttc ttgtgttgca
    11701 gagagtaacg acgctacgcg cccgagatgc gataaggtat ctaaataatt tacacgcgca
    11761 atgttttggc taatccctcg tcgaccaccg acccatgcac cggttgcaat ggcactcttt
    11821 aatcgtgagg ttaacaactt atcgcggatg ataattttga ctgactgaaa cttgcctctc
    11881 ttgacaagac gctggaagtt gtacaaaatg tcgttgacaa ggacgcgcat atttacacga
    11941 aacaagtctg caagcaagtc tcctggtaat ttgagctttt tgttcttgta atggtctttg
    12001 tctgtcattg tttttctttc gattgcaatc tggaggaact ttttggcaag cttacagaga
    12061 tggtacgctt ttgcgagccg ttctttttct gtgatgccga tgtgcggcaa aaggtagtgg
    12121 tctaattgct ctgttgtttt ctcgagctta acttctcttg gctgcgtaag gcctatcttt
    12181 tttgcgatta gttccattgc ttcatcaggc acttttattt ctgcagcatt gaacaaatta
    12241 atgtagacat catcgtactc tttctcgtca cagattgcgt ccatgatatc tttatccttc
    12301 gtgagcccta atgctttgat aactgtaaat agaggaatac gcttgaactt ggtgaacgat
    12361 aagtaaaata taccatcctt catctgttca atcacgtggg gaatactgta tggaccttgc
    12421 tgggagaata cctttgcggt gaacttgctt ggaccaactt tgttttcctg gaaaaaaatt
    12481 ttgtttggca tgagatcttc gacagtgata atgacacgtt cgtttccatt aatgataaag
    12541 taaccacccg gatcagttgg gtcttcccca tgctcaatga gttcgtcttc agataatttg
    12601 tataagtggc agtacttcga acgcaacatg ataggaattc tgccaatctg tgacgtgaat
    12661 gattctcgtt gaatcccatc gatgatgaca gatacttcta agaaaatcgg cgcagcgtag
    12721 gttaagtttc tgagccgtgc ttcaataggg taaatgtttc ttttggaacc gtcagcttca
    12781 gtaatctgtg gtttttcaat ccagattttc gcaaacttaa tggtaaactc ttgcacctct
    12841 ggaggaagaa ttgttggaat aatatctcca atttcgtcga cggttttttg catctcaata
    12901 tcgataaaac ggttaaaaga atcaatgctg gattcgataa acgaatggtc ctcgaaatat
    12961 ttttttacca aaagatgttt gcttttatcc attaataacc acccgaaaat agatactttt
    13021 tcctgctgtt gcgctctttc gaacaatttt tattacgtcc ccttgctctg gattcaagtc
    13081 acgaatcgcc ggatctgttt tgtgaattcg tggaagttgc ctcttagaaa tatgaaactt
    13141 ctcgagagat gccttggcct cctcgtcagt aagcttactg tgctcaggta ctaagatatg
    13201 tttcgcgacg tccacaccaa cactcattgt ttcctgtgat actcctttat ttccctcttt
    13261 taatatgatg gaccggacgg gatttgaacc cgcgaccacc tgatttcctt gcttgataaa
    13321 agtttcacca cgttaaggct ctccttccca tgcccttcag gtgctctacc aagctgagcc
    13381 accggtccgt acgccctgac cgggatttga acccgggtcg tggcctcgac agggccacat
    13441 gatagaccgg actacactac cagggcagct acatacaatc ctctatgtgc gcattgcata
    13501 attgcttgtt cgtgtagggt tttgagtgat aaatattgga gagtatcagc ttttggcaca
    13561 tagaaggatc tgttcatagc cgttgaaaga aaaattcgaa gtttataaat cttttgtttt
    13621 ctcagaagaa actgaaaatt tttcagaaac tttatgcaag tatgtatgaa ggatttcaca
    13681 gcttgttttt gatagattag aaatctctct ttgagtaaaa gaaaattctt aatggtccca
    13741 aattaaaata ttataaaaat ctattccaaa agaactgact gaccatttcg catcacgtgc
    13801 actgtcttgc cgtacttata tcctaactct tctgcaagct ctgccaatgg cattaacttt
    13861 gatacgtcac cctgacaggg aataatgtgc tgcggatgca atagtttgat caaatcatga
    13921 tgatcttctc gtgcaagatg tccagatgca tgtatatctt taaacaaccg cacacctttc
    13981 tgtttcaatt tggtttctaa cgccgccctg tttgcgatgt ttatcggcac tggaattgtt
    14041 ttgcatgcaa agataacttg gtcgcctgca gaaaatttgt acggcagttc gcccgtgacc
    14101 atgcgcatca agatcgacct gggttcccct tggtgcccag tacagattac cacatatttt
    14161 ccaggatttt tctgaacctc agttaacatt tttcgtacct cgcgcgtgta gcgtgcaatg
    14221 cttgcgcgtt tgctgaagtt taccatgcga atattttctg ctgcagaaat gtatcggtcc
    14281 atcgatcgtc ctagaataac tactttccga cccattgtgc gcgcaaattc tattgttgct
    14341 tgcagtcgtg ctatgtgcga tgcaaacgtg gtgactatca ctaattttcc tttattttct
    14401 gtggagagaa gcacgtcctt gagcatttct cgcgccaagc gttccgatgg cgtcttgact
    14461 tcctcatagg cgtacaacga gtcgacgata aacactttaa ttccctgtgc gccaatctct
    14521 cgtaatcgtt tgtagtttgt tttccttccc aatgtaggat cattatccaa tttgaaatcg
    14581 ttgccgtaca aaacgatacc tttcggcgta tggataatcg ccatcatagt ttgcggtgtt
    14641 gagtgaggaa tttccatgaa ttctaaagtg atattctcag aaatcttgac acggtctccg
    14701 tcttgtaaga cgttgagctt gttgggaatg tgtacgtctt cgtcgaggag aatacttttg
    14761 agcacttcta atgtgtatgg tgcgccatag atcggacaat tgtaccgctt tgccaggagc
    14821 ggaactgcgc caatatggtc caaatgacag tgtggaagaa tgatagcttt gacattccct
    14881 ctcagtcctt ctagcacaga gtcgtcaggg atgatatgat gttgaataaa atcttctcta
    14941 gataattttg ttttcacgac atcttcgtcc tgcaaacgaa tcacttcagg caggtagaag
    15001 cccatgtcac atatgataac atcgtcgccc acgcgaatcg cagtcatatt catgcctact
    15061 tcagaatagc ctccaaggcc aaatatttct atatccatat aaatgataaa aaataacgct
    15121 gtgtttatat attttcttct ttttagtgca atgtctggat ttttatcctt gagaaatttt
    15181 tttacaaagc gtttttttga aacacaaagc ttttatatct ctaagaaatc aaatttcctt
    15241 catggataca gtcaaagcac gacctgcatg ggtaaaggac aagaatgttg cagaagattt
    15301 tgaagtaatt gacgttccca gatgggatga catcaaagat tttatttttg acaaagaagg
    15361 ctgttatgta ttgattaaaa tttataggga aacacatgat atcggcgttg ctatttgtaa
    15421 tcagcagcac gttatcctga aagaattccg tggacgacgg acacaggata tttacagctt
    15481 cattttcaca tacgacagag agcataagaa aggatggttt aatgtcgtgg accatgcagc
    15541 atacctcggc aaagagttaa agaaagctga gattgcactt gcactaggct atgattatta
    15601 tcaagagtaa ggagaaatta atatggtaca tacagaaaat gaaagaaaag aagaattatc
    15661 atattattac gagaagaatt acgaacgcca tgttcattct gctgcagaaa ttattaaagt
    15721 atttcatctt cacggaacta ttccggcatt tggtattgtt ctcggctctg gtcttggaga
    15781 tgtagcagat gcaatcgagg atgctcaccg cgttccgtat gaagatattc cctattttcc
    15841 tagaacaact gtggaaggac atgaaggaac actaattgta ggaaagcttg aaggcgttcc
    15901 tgttattggt ttgaaaggaa gaaaacatta ctacgaagtt gcagaccagc tgtataacaa
    15961 tggtattctg caaactgttt ttccagtaca tgtccttgca gagcttgggg tgccgaacta
    16021 ttttgtcaca aatgcagcag gtggacttaa tcagtcttat agcgttgggg atgctatgat
    16081 cattcgctcg cacattaatc ttcttccgaa ttctcttcta gggagacaga agaaattttt
    16141 gcgtcttgat ggaacgcctg tctggagatt tcagccgatg aacgatgcgt acgatccaca
    16201 tttacgagag atgcttctca atcaaaatag atttggtcct catgttcatg aaggcgttta
    16261 ccttgctgtt actggaccta cgtttgaaac tgaagcagaa tctatagcat ttagaaacgg
    16321 actttttgca gacgctgttg gcatgtccac tgcaccagaa gtgattgttg cgcgtaatag
    16381 gggcatgaag gctgtaggat tttcttgcat caccaacaag atcgctgcgg atggcacgaa
    16441 tgcaacaaac cacgaagaag tcaaagcgat ccttgactct gaagacgttc gaaaacgctt
    16501 ggagtcactt gtgtgcggat tttttgcaga atatcgcaaa gagtcaggtt tataaaggat
    16561 attttttcca taaatgacat gcttagctgg aaaaatcttg ttcagagtat cgcaggtata
    16621 agtacgcttt tcgcattgcc atacggtatt acttatgtaa attgtctgcg aaatcatact
    16681 gttctacaag attttcccgt gtactcttca ccagaaaatt tctctcggga ttttgctata
    16741 gaaaagcaca agcttggcat cgaaaacgtt atagtgacga cagagtttcc atatactgaa
    16801 ccgagtgcgc acacacaaag aatcacggac catacttaca tcatttcttt taatccaaat
    16861 tatgcacgaa aagtagtctt acggcatgaa ctgtaccatg taaaacaatt agaaaaatcg
    16921 agctttctgt ttccaaagtc agcaccattg aattgcttgt ctgaatgggc tgcaacatcc
    16981 tacgcgctta aagaaaaagg tttataagaa aaaacatctc tattatgaga tatgtcagaa
    17041 aaagagggtg gtcttgaaaa gtctctaggc tacgaagtta ctgtttccca tccgaatgga
    17101 caaacgtatg ttctatgtgt tgatacagaa agaaaaatta gaggatggta ccttgacgga
    17161 taccggcgct atctttccga ctgggaactc tggaatcaca aggatggttt ggggattttg
    17221 aaaggagaac tgcagcaagg taagagtgtc cttgtcgatg agaatatttt taccgctaat
    17281 ggaaatactg cggaagcata ccttgtgata cgcgttgaag aagtagacat agaagagatg
    17341 acaaagtatc attacattgc aggtcttgac tatccgattt tcttgcctga gtatgaaaat
    17401 taatgaaagt gccgacgagc ttgagtttct gagtgaagaa agggaataga cttataaatt
    17461 tggttgctac tcttattcca tgagcaactt tgtaccagat tacgcgtttg caaatgttct
    17521 ttccatcgac aaacgattgt tccgcggcaa agagttgatt atttttgacg tcgataacac
    17581 gttgttttat ccagaaagta ccaagataag accagaaatt ttattttggt ttaaggacgt
    17641 gaacaaaaag taccagtgcg tctgcctttc caacagccac actattcagc aacgaaaaga
    17701 tgcaatatcc tccatcctcg gctgcgagat tttcatgagc gattacagaa agccctcaaa
    17761 aaagttattt atgcaaattg tcagaaagta tcaagtcgac ccgaaaaaaa ttctcgtcat
    17821 aggcgacatg caactcacgg atgtcctctt tggaaacaga aacaatgcga caactattct
    17881 ggtcaagccg atgagcacaa aggaactatt ttccattcgt gttgtacgga catttgaagg
    17941 attattattt gggagaaaaa agtaaatttc tttacacacc cataaaattt atataccttt
    18001 cttctttccg aaagcagatg gtcgatacgt ttcagagcaa aataatagaa aagaaatggt
    18061 tgacaaaaga cgtgctcttg ctgtctatca ctgtaccaga atattttgat tttaaggcgg
    18121 ggcagtatgt tatgttcaag atgacagtcg atggcatgac gaagctcaag ccatactcta
    18181 tccttagtcc cccatcacaa aaaggacaac tagatttttg cataaagatt attgacggag
    18241 ggcatgcatc cgaatctttt aaagttctca acattgctga cgaactgacg gtgaaaggac
    18301 catttgggca ctttgtcatg cagactgaca gcccttgtga cgaatattgg tttattggca
    18361 cgggaacagg catcgtgccg ctctactcga taatcctaga acatctacct aagttttcta
    18421 acaaaacatt ccgcttgatt tttggcgtgc gaaaaaaaga aggattgttc ttgcacgatg
    18481 aactaaaaaa cttagaacaa cgatatccta actttatctt tgtaccgaca ctcagccagg
    18541 atacatggga attgggaatc gggcgcgttc aagcgcaact caccggcgac ttgcagaata
    18601 aggaatttta tatctgtggc ttgaaagaga tggttatcga aacggaagca ttccttcgtg
    18661 aaaaaggagt gccaacacat catattcatt ttgaacggta ctcataggta aaaaatggac
    18721 gcgattaaaa aagaaacgac taaagcgcct gaagaaattc ttaaatctct tgatactcgt
    18781 cttttggcta tagaaaacaa tacaggacaa atgaaagtgg tagtgcgtga tttgtatgca
    18841 cggccagcac cagaaaataa aagcaggccc gccctctatt ttatggtgtg gaccacgatg
    18901 cttggagttc tctgcagcgg tccatgtacc ccgccgatga gtgccgtcgg aagttactat
    18961 ggcgcatcga aagaatcatt agagcttcat attgagaacg ttgttggtgc tgaagagcct
    19021 gagaaattct atctgattaa tggacaacgt gcctacttag aaatagacgg tgcgccagtg
    19081 gaagaatgtt tttaaaaaaa gttttaaccg cacttagaat agccgcatgt gggatttgta
    19141 catttcatgc atccctcttc gaaaatcatt tgtgatttgc attcttgaca aaagttccca
    19201 gaaaattttt ggtcattttt caccccacta ttaccattaa ttgcatttat tccttccttt
    19261 cttaagattg attctaatgc aagagcgacg ccatctggaa gagatcgtac tcttttggag
    19321 ccaaatccag tctgtgtctc gccaccaatc cctctcaatt gttcaataat catccctgga
    19381 ggaacccctg ctttcaaacc caaactcata agacgaccta gtccttctgc aatagctgca
    19441 atatcctgcc cgcctctccc tatgctcaaa aatgcttcgt atggtcgccc aaggccgcca
    19501 ttctcctttg ccctgttgaa cgtcaagaag cccgtgccaa atggtgtttc caacttttcc
    19561 gtaagccctc caatgtgatc tggtcttgga gatcggagct ggtcttctaa tactccctct
    19621 actttccttt ccatagtctg aagcacttgt actttctttg caccgtcacg ataaaccgtt
    19681 attcctttac atcctagatt gtatgctaag agataggctc ctttcacttc ttctacagtt
    19741 gcatcatttc gcatgttaat tgttttactt acagcattgt ctgtccctct ctgaaacgct
    19801 gcttggatac ggacatgcca atcgtaacta atgtcgtgtg ctgtcctgaa aagtttctgc
    19861 acaccatctg gaacctgttc cataccctgg acactaccat ggttctcttt aactttttcc
    19921 aataactcct tagaataaaa gcctcgctct ctcgctattc tttcaaaatg tttatttcca
    19981 taaattaatg tgtccccccc gcgaaggttt ctattgaacg ccactgcata atatggctcg
    20041 ataccgctgg cacaatcaaa taacatagaa atggttcc
//
LOCUS       DATDZU010000008         2121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1819347, whole genome shotgun sequence.
ACCESSION   DATDZU010000008 DATDZU010000000
VERSION     DATDZU010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1819347"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            343..1194
                     /locus_tag="VJJ79_00300"
     CDS             343..1194
                     /locus_tag="VJJ79_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22197.1"
                     /translation="MAETALVVVIDALGVETLRKHIGSARDSHPHLPNLSRMGLGNLL
                     GKGYNDICEPTTKHDIALEAAPSSVWSDSVMGHRELMGFIDPNDYRLFMEGFPAAFVN
                     ELEDRIGRPILFNKRAGGMEAIEINNSEHLRNGGVILYASMCDPIAQFAADEKEISPQ
                     DLEEIARTAFTLSQEHGVRLTRVITRPYESKEGRLTRTSNRRDVVLGMPPDVETFIDI
                     ARRNGVYTVSIGKSADVVNTVWDCDRNLRGPLPTDLKSMYTMKRTDDKNPYSVREALG
                     VLKDAKK"
     gene            1210..1563
                     /locus_tag="VJJ79_00305"
     CDS             1210..1563
                     /locus_tag="VJJ79_00305"
                     /inference="COORDINATES: protein motif:HMM:NF013811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22198.1"
                     /translation="MLCNLPDTDSLYGHTRNSAGALESLQAFDRVIPLLEAAMPEDGT
                     LVITADHGMRDGGDYGYHSREAVPVLARRIGTRLSDSCGQTGASTYAIVGLMCATVFG
                     FGDEFKEKCSLRDRL"
     gene            complement(1659..2060)
                     /locus_tag="VJJ79_00310"
     CDS             complement(1659..2060)
                     /locus_tag="VJJ79_00310"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HLC22199.1"
                     /translation="MSILLDTTFLVAFAVKEDQYHSRARSIALEVSQKSPLVVLDCIF
                     FEFVTLLRKRVSNPHVASQEGNALLGDNRIVVVSTNQRLFVDSWKLFQKYSQLSLADA
                     ALVAYAQFSGVHSIVSFDKDFDIFEFVQRIC"
BASE COUNT          671 a          400 c          496 g          554 t
ORIGIN      
        1 ttggtgtccg acgcacagcg ggagaagaag gtcaaattct gcacaggttg atagcaaaag
       61 caaaactcaa tattagagag ccacattatt ctctgggaca tacgcctctt gaggtctttg
      121 ttggggtgtt gtttgggatt gctgcggcgt ttattgtgat gagcatataa cattcttcat
      181 gacttcacat tttgagtaat ggtcgttgga gcagaaggaa ggcgaaaaaa atatttttta
      241 aacgttttat ttttttcttc ctttcgtagc gacaataatc tatcaattaa gttttaaaat
      301 acgtaaagtt tttatgcacg atacaatttg agaagaacac aaatggcaga aacagctttg
      361 gttgttgtga ttgacgcact tggagtcgag accctcagaa aacatattgg atctgcaaga
      421 gattctcatc cacacttgcc aaatttaagc agaatgggcc tgggcaatct tctcggcaaa
      481 ggatacaatg acatttgcga gcctaccacg aagcatgata tcgctctgga agcagcaccc
      541 agttcagtgt ggtctgatag cgtgatggga catagagaac tgatgggttt tatcgaccca
      601 aatgactaca gattattcat ggaaggcttt ccagcagctt ttgttaatga attagaggac
      661 agaataggac gacctatctt atttaacaag cgggcaggag gaatggaagc tatcgaaatc
      721 aataattcag aacatttgag aaatggtgga gttattctct atgcgagtat gtgcgatccg
      781 atagcacaat ttgcagcgga cgaaaaagaa atatcaccac aggatttaga agaaatcgca
      841 cgaacagcat ttacactttc acaggagcat ggagttcgct tgacacgtgt cataacgcgt
      901 ccatacgaga gtaaagaagg aagactaaca cgaacaagca atcgcaggga tgttgttctc
      961 ggtatgcctc cagacgttga aacatttatt gatatcgcgc gaagaaatgg agtttacaca
     1021 gtgagtattg gaaaatcagc cgatgtcgtg aacaccgtat gggactgtga tagaaatctt
     1081 cgtggtccct tgccaactga cttaaagtca atgtacacca tgaagagaac agatgataaa
     1141 aatccctact cagtcaggga ggcgcttgga gtgctgaaag acgcaaaaaa gtaaggtaaa
     1201 cctacatttg tgctttgtaa tcttcctgat accgactcac tttatggtca cacgagaaac
     1261 agcgcaggag cacttgagtc attacaggca tttgaccgag ttataccact tctcgaagca
     1321 gcgatgccag aagacggaac actcgtcatt actgctgacc atgggatgag agacggggga
     1381 gattatgggt atcacagcag agaggcagta ccagttttgg cacgaaggat aggaacgaga
     1441 ttgagcgact cctgtggtca gacaggtgca tcaacatatg ctattgttgg tctcatgtgt
     1501 gcaactgtct tcggttttgg tgacgagttc aaagagaaat gttctctcag ggacagacta
     1561 tgagtagtcg ttttgagcag aaggaaggcg aaaaaaatac gtaacgtttt ttttattttc
     1621 gtaacgacga taaccctgca tcactttgta acaagtagtc agcaaattct ttgtacaaat
     1681 tcaaagatat caaaatcttt atcaaaagaa acaatggaat gtacgccaga gaactgtgca
     1741 tatgcaacga gcgcagcatc agctaagctt aattgactat atttttggaa caatttccat
     1801 gaatcaacaa acaggcgctg atttgtacta acaacgacga tacgattgtc acccaaaaga
     1861 gcatttcctt cttgtgaagc aacatgggga tttgaaactc gttttcgtag gagtgtaaca
     1921 aattcaaaga agatgcaatc aaggacaaca agtggggatt tttgagaaac ctcaagagca
     1981 atgcttcgcg cacgagaatg atactgatct tctttgacgg caaaagctac aagaaaagtg
     2041 gtgtcaagaa gaatgctcat gagtacacta tctcatcaat ttcctcactc agacgttcgc
     2101 cgccttcgat gtgaataggg t
//
LOCUS       DATDZU010000009         2634 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1807465, whole genome shotgun sequence.
ACCESSION   DATDZU010000009 DATDZU010000000
VERSION     DATDZU010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1807465"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..498
                     /locus_tag="VJJ79_00315"
     CDS             31..498
                     /locus_tag="VJJ79_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22200.1"
                     /translation="MNEDAMTREAYEQACKTLDPIVLFPGSLEELNSLGERYKFIPLQ
                     GGEKFLIGGITLRLSDLWLHITVTHRNTGGGLIENVKGPASTEEFGVLKGIVEEQYLQ
                     MGLSLFERDIRHRAMVGGADGLVHVQLYSAQSPMYMGVPVKRNIDPKVYGRAL"
     gene            complement(503..763)
                     /locus_tag="VJJ79_00320"
     CDS             complement(503..763)
                     /locus_tag="VJJ79_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22201.1"
                     /translation="MASAGEVLKNIAKGVYVVIVAFCESLTVSFYQNIKKHWRGKDQE
                     YMQVKVPPGYKDEKQGPEYPEVGAGATKEDNPFDFSGLPGFK"
     gene            complement(768..1439)
                     /locus_tag="VJJ79_00325"
     CDS             complement(768..1439)
                     /locus_tag="VJJ79_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22202.1"
                     /translation="MNFLKDLCQGKKDDYIHQQFTRFGRGDYKRLIFTIRRSKNLSVH
                     ASYDFANELFHIAAMHCKENVAVKGKIVTNYNFEKEVTAEKFSKRGKMYTAEINGTYS
                     PKQLQEMYETFKNHHLLLSFKGDSIRLSCKTGLPKPGSEPKDNFCSATLPVECVDEFA
                     FDFENNFGRVDIVHTLHIDDVVIPKEYQNDFAQARIHAIRKGKLIREITIDGNQVRKE
                     YPLEV"
     gene            complement(1464..2288)
                     /locus_tag="VJJ79_00330"
     CDS             complement(1464..2288)
                     /locus_tag="VJJ79_00330"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HLC22203.1"
                     /translation="MQDLEKLSQKIDAKMRRLCRHQYVHLTDRGNSAIFMAMYIAKKM
                     NPKPDIVIPDQGGWFSYKKYPQFFGFNVMEVKTDYGVIDLKDLRKKVKHASAFIFSSF
                     AGYFAEQPLRKIKTICKKAGCLVIEDASGAIGDTKLCNGKYSDIIVGSFGKWKPVNYG
                     YGGWLSTNEKAYLECAREAMSITKIHPAFYEDIYPYLKKNNVEKFLALQREVKKELEA
                     FDVLHRDKRGINIAVKFDPKVIAYCNEKGYPYILCPNYTRVNELAISIELKRLENL"
     gene            complement(2421..>2634)
                     /locus_tag="VJJ79_00335"
     CDS             complement(2421..>2634)
                     /locus_tag="VJJ79_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22204.1"
                     /translation="QDREIAPRYNEGFGRRPDVLQFPGDVLELARKGATSFHISEERW
                     EDPLTLKTGLRKRDLEENRRGWDLIL"
BASE COUNT          683 a          559 c          542 g          850 t
ORIGIN      
        1 taaatagaac ttctctttct ttaaaataaa atgaacgaag acgcaatgac tcgtgaagca
       61 tacgagcaag catgcaagac tcttgatcct atcgtcctct ttccagggag tttggaagaa
      121 ctcaattctc ttggcgagag atataaattt atacctctgc aaggagggga aaaattctta
      181 ataggaggaa ttactctgcg actttctgac ctttggcttc acataacagt aactcacagg
      241 aatacgggag ggggacttat agagaatgta aaaggacccg catctacaga ggagtttggt
      301 gttctaaaag gaatagtaga agagcagtac ctgcaaatgg gattaagtct ttttgagaga
      361 gatatcagac atagagcaat ggttggtggt gcagatggtc tcgtccatgt tcaactatat
      421 tctgctcaat caccaatgta tatgggtgtc ccggtgaaaa gaaatattga cccaaaagtt
      481 tatggaagag ccctgtaagt aatcacttaa atcctggcaa tccagagaaa tcaaaaggat
      541 tgtcttcttt cgttgcacca gcgccgactt caggatattc cggtccctgt ttttcatctt
      601 tgtaccctgg ggggactttc acttgcatgt actcttgatc ttttcccctc caatgtttct
      661 taatattttg gtaaaaagaa acggtaaggg attcacagaa cgcgacaata actacataca
      721 ccccttttgc tatgtttttc aagacttcac ctgcgcttgc cacaacttca cacctcaaga
      781 ggatattctt ttctcacttg attaccatct atggttatct cccttattaa ctttcctttc
      841 cgaatggcat ggatgcgtgc ctgcgcaaaa tcgttttggt attcttttgg gataacaacg
      901 tcatcaatgt gtaacgtgtg cacaatgtct accctaccga aattgttttc gaagtcaaat
      961 gcaaactcgt cgacgcattc tacgggcaac gttgcagaac agaagttgtc ttttggttcg
     1021 cttccaggtt ttggaagacc agtcttgcag gacaaacgaa tactatctcc cttaaaactc
     1081 agcaggagat gatggttctt gaatgtttca tacatctctt gtaattgttt tggcgagtat
     1141 gttccattga tctcagcagt gtacattttt cctcgcttag aaaatttttc tgccgtgact
     1201 tctttctcaa aattatagtt ggtaacaatc tttcctttga cagcgacatt ttctttgcaa
     1261 tgcattgcag cgatatggaa cagttcgttt gcaaaatcgt agcttgcgtg cacagaaagg
     1321 ttctttgatc tccttattgt gaaaatgagc cgtttgtagt cgccgcgtcc gaagcgggta
     1381 aactgttggt gaatataatc gtcttttttc ccttggcaca ggtcttttag gaaattcatg
     1441 ggactatgga gaaacgcgga agtttataaa ttttctagtc gtttcaactc tatagaaatg
     1501 gcgagttcat tcacgcgcgt gtaattcggg cagagaatgt atgggtatcc tttttcgttg
     1561 caataggcga ttactttcgg gtcaaatttc acagcaatat taatccctcg cttgtctcga
     1621 tggagaacgt caaatgcttc caattctttc ttgacttccc tttgcaatgc gagaaatttc
     1681 tcgacattat tttttttgag gtaaggataa atatcctcgt aaaatgcagg atggattttt
     1741 gtgatggaca ttgcttcccg cgcacactcg agatacgctt tttcattcgt cgatagccat
     1801 ccgccatagc cgtagtttac aggcttccat ttgccaaagc ttcccacgat aatgtcagag
     1861 tattttccat tacagagttt ggtgtcgccg attgcacctg aggcatcttc aatcacaaga
     1921 catccagctt ttttacaaat agtttttatc tttcgtagtg gttgctctgc aaagtaccct
     1981 gcaaaagaac taaaaataaa cgcggatgca tgtttcactt tttttcttag gtctttcaag
     2041 tcaataaccc catagtccgt ttttacttcc atgacattga atccgaaaaa ttggggatat
     2101 tttttgtatg agaaccatcc cccttggtca gggatgacga tgtccggctt agggttcatt
     2161 ttctttgcaa tgtacatagc catgaagatt gcagaatttc ctctatccgt gagatggacg
     2221 tactggtgcc tgcagagccg tcgcatcttg gcgtcaatct tttggcttag tttttctagg
     2281 tcttgcatag cagaacgaac ttttatcata tttataaaag tattccttgg atttgtattg
     2341 gcgagcgaaa aaagttttat cctgcgatgc cgtacctaac cattggctgt ttttttgggc
     2401 ttggcatcgt gttgcttccg ttatagaatt agatcccatc cccgcctatt ttcttccagg
     2461 tcccgttttc ttaagcctgt tttcagagta agtggatctt cccatcgttc ttcagagata
     2521 tgaaaagagg tagcgccttt ccgtgcaagt tcgagaacgt caccaggaaa ctgcaggaca
     2581 tccggccttc ttccaaatcc ttcattgtat cgcggcgcaa tctctctatc ctgt
//
LOCUS       DATDZU010000010         3678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_184275, whole genome shotgun sequence.
ACCESSION   DATDZU010000010 DATDZU010000000
VERSION     DATDZU010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3678
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184275"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1900)
                     /locus_tag="VJJ79_00340"
     CDS             complement(<1..1900)
                     /locus_tag="VJJ79_00340"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HLC22205.1"
                     /translation="MVVLSQVRKRNGQLVPFEQEKIALAVRAAMKEVKRHDKSEKVTD
                     DIVAFLNKHFKRIVPTVEDIQDVVEDVLIQHKMHDVAKAYILYRAKREELRDLKYSFG
                     VRDDLKLTLNAITVLQKRYLRRDEKGTIIETPEQMFRRIARHVASAEKKAGQKKWEDV
                     FFHMLKDLDFVPNTPCLVNAGTRLNQLCACFVLPVEDSIEKIFDTFKNSAVIFQSGGG
                     VGYSFSRLRASGSIVSSTNRTASGPVSFMEVFDKGADVIKQGGVRRGALMGVLRVDHP
                     DIFTFMTEKAKGKLTNFNISVGATDEFMHAVIDNKNYWLTDHKGQKVQKTNARDVFDF
                     ICGNAWECGDPGMLFLDEINRRHPLRKMGEMEATNPCGEANLLPNEACCLGSINLSHM
                     AGNGHIEWAKLAKTVRESVRFLDNVLIVTTFPLKAIEEISLGNRKIGLGIMGWADLLV
                     ILGIKYDSHNALTLAKEVIRFIRKHAEEESEKLAKERGQFPNFKLSNLKKKRRNATIL
                     SIAPTGSISIIAGCSSGIEPLFGVAYVRNVLGGMQLFEVNPQFEKIARYRGFYSKELM
                     MTIAQQGSIQNIKEIPKDIRDIFMTSMDIPLEWHIRMQAAFQSEVDNAVSKTINMPTD
                     ATIGDVKRA"
     gene            complement(1963..2979)
                     /locus_tag="VJJ79_00345"
     CDS             complement(1963..2979)
                     /locus_tag="VJJ79_00345"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013099824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HLC22206.1"
                     /translation="MVKNVIREYKDQKPYQIAPAPDVEHLPKVKGHDFEKDFHLDTFL
                     QSYATTGFQATHLARATEIVQEMRREHATIFLGYTSNIVSSGLRDIITFLVRNKHVHV
                     LVTTAGGIEEDIIKCLKPFAIGIFNVSGRSMFEKGINRTGNIFIPNDRYLYFEKFINP
                     FLDRLYNEQKEKGIVHTSTEIIHELGKEMEKEKNCEESILYWAYKNNIPVFCPALMDG
                     SFGDLVYFMKQRHSDFKIEMTGDSKSIIDLALNADKAGAIILGAGIAKHFILNANIFR
                     EGLDYAVFVNTAEEFDGSDSGALGEEAITWGKIKTTATQVKVHADATIVFPLLVAGTF
                     AKKD"
     gene            3085..>3678
                     /locus_tag="VJJ79_00350"
     CDS             3085..>3678
                     /locus_tag="VJJ79_00350"
                     /inference="COORDINATES: protein motif:HMM:NF013112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22207.1"
                     /translation="MKVFVKTYGCTFNQRDSKTIKGVLQSEDFTIVDSEREADVIVVN
                     SCGVKGVTQDKIISYINVQNKKVYVGGCLTKMIDMTKYSNVAGVFDPNTISQVGHQIK
                     NKIPKNFSNKKENKLSLSMVKVKEEKTIIPISEGCLGDCTFCSVKLARGRLRSYRVGD
                     IVRAMQGKTIYLTSQDCGCYGFDIGTNLAELLREVVDV"
BASE COUNT         1012 a          814 c          733 g         1119 t
ORIGIN      
        1 atgcgcgttt cacgtcgccg attgttgcat ccgtaggcat attaattgtt ttagagacgg
       61 cattgtccac ctcagactgg aacgctgcct gcatgcggat gtgccattct aaagggatgt
      121 ccatcgacgt cataaaaata tcgcgaatat ctttagggat ttctttgata ttctgaatgc
      181 ttccctgttg cgcaatagtc atcatcagtt ctttgctgta gaatcctcga tagcgcgcaa
      241 ttttttcaaa ctgtgggttg acttcgaaca gttgcatacc gccaagaaca tttcgcacat
      301 acgcaacacc gaagagcggt tcgatgccag aggaacagcc ggcgataatg ctgatgcttc
      361 ccgtcggtgc aattgaaagg atagttgcat ttcttcgttt ctttttcaaa ttgcttagtt
      421 taaagtttgg gaactgacct ctttcttttg caagtttttc tgattcttct tctgcatgtt
      481 ttctaataaa tcgtataacc tcctttgcca acgtaagagc gttatgagaa tcatacttga
      541 tgcctagaat gacaagcaag tccgcccagc ccataatgcc gagcccgatt tttctattgc
      601 ctagagatat ttcttcaatt gctttcaatg ggaacgttgt gactatcaaa acattatcta
      661 agaagcggac gctctctcga actgtttttg caagcttcgc ccactcgata tgtccatttc
      721 cagccatatg agaaaggttg attgaaccaa ggcaacatgc ctcattaggt aataaatttg
      781 cttcgccgca gggattcgtt gcctccatct cacccatctt tcttaaggga tgtcgtcgat
      841 taatttcatc aaggaataac atcccagggt caccgcattc ccatgcattg ccgcagataa
      901 aatcaaatac gtctcgcgca tttgtttttt gtactttttg tcctttgtga tctgtcaacc
      961 aatagttttt attgtcaata acagcatgca tgaactcgtc cgttgcaccg acagaaatat
     1021 taaaatttgt gagctttccc tttgctttct cagtcatgaa cgtaaagata tctggatgat
     1081 cgacgcgcaa gacacccatg agcgcacctc tgcgtacgcc accctgtttg atcacgtccg
     1141 cgcctttgtc aaacacctcc atgaacgaga ccggtcctga ggcagttctg tttgtcgacg
     1201 aaacaatgct tccgcttgca cgcagtcttg aaaatgaata cccaacacct cctccagatt
     1261 gaaagataac tgcagaattt ttaaacgtat caaagatttt ttctatagaa tcctcgactg
     1321 gaagaacaaa gcatgcacag agctggttca agcgcgtccc tgcgttcaca agacaaggag
     1381 tattcggaac gaaatcaagg tctttcagca tatgaaaaaa aacatcttcc cactttttct
     1441 gcccagcttt tttctccgcg gacgcaacgt gccgtgcaat gcgccggaac atctgctcag
     1501 gcgtttctat aatcgttcct ttctcatcac ggcgaaggta tcgtttttgc aagacggtga
     1561 ttgcattcag tgtcagcttg agatcatctc tcacgccaaa agaatatttc aagtccctaa
     1621 gctcttctcg ctttgctcga taaagaatgt acgcttttgc aacatcgtgc atcttatgtt
     1681 gaatcagaac atcttccaca acgtcttgga tatcttcaac ggtaggaaca atccgcttga
     1741 aatgtttatt gagaaatgca acaatatcat cagtaacttt ttcacttttg tcatggcgct
     1801 ttacttcttt catcgccgcg cggacagcga gcgctatctt ttcttgctca aaagggacta
     1861 actgtccgtt acgcttcctt acctgagaaa ggaccaccat atcacctctt caccttatca
     1921 aagtgtattc tgttttaaat accttctgtt tgcatataaa cattaatctt tttttgcaaa
     1981 cgttccagcg acgagtaacg ggaacactat cgtcgcatca gcgtgtactt tcacttgtgt
     2041 cgcagtggtt tttatttttc cccacgtgat tgcttcttct cccagtgcgc cagaatcgct
     2101 tccatcaaac tcttctgcag tattcacgaa cactgcatag tctaatcctt cacggaaaat
     2161 atttgcgttc aagatgaaat gttttgcaat gccagccccg agaataattg ctccggcttt
     2221 gtcagcattc agcgccagat caatgatgct tttgctgtca ccagtcatct caatcttaaa
     2281 gtccgagtgt cgctgtttca tgaaatacac cagatcgcca aatgatccat ccatgagtgc
     2341 agggcagaac acaggaatat tatttttgta cgcccaatat aggatagact cttcgcagtt
     2401 tttttccttt tccatttctt ttccaagctc gtgaataatt tctgtagatg tatgaacgat
     2461 tcctttctct ttttgttcat tgtagagtcg gtctaagaaa gggttgataa atttttcaaa
     2521 gtacagatag cgatcattcg ggataaagat gtttcctgtt ctgttgatgc ctttctcaaa
     2581 catacttctg ccgctcacat taaatatgcc aatagcgaaa ggcttgaggc atttgatgat
     2641 atcctcttca ataccgcccg ccgtcgtgac gagcacatgc acgtgtttat ttctcacgag
     2701 gaaggtgata atgtcgcgga gcccagaaga aacaatgttt gatgtgtatc ctaggaaaat
     2761 tgttgcatgt tcccgtcgca tttcttggac aatctcagtt gctctcgcaa ggtgcgttgc
     2821 ttggaagcca gtcgtcgcat agctttggag gaaagtatct aaatgaaaat ctttttcaaa
     2881 atcatgccct ttaaccttag gcaaatgctc gacatcaggt gccggagcaa tctgataagg
     2941 tttttgatct ttgtattctc ggataacgtt ctttaccata tgctgagaaa aaaaaacctc
     3001 gtttataaag gttactttaa tggattttga caagaattag aggaacaaaa cctatttaaa
     3061 tcttcttaga acaatctaga gcaaatgaaa gtatttgtaa agacttatgg ttgtacattt
     3121 aatcagagag acagcaaaac aatcaagggt gttttacaaa gcgaggattt tacaatagtg
     3181 gattctgaaa gagaagcaga cgttatcgtc gtcaattctt gtggtgtgaa gggagttacg
     3241 caggataaaa taatttcgta tatcaacgtg cagaataaaa aagtgtatgt cggtggctgt
     3301 cttacaaaaa tgattgacat gacaaagtac agcaatgttg caggcgtctt tgatcctaat
     3361 actatttcac aagttgggca ccaaattaaa aacaagattc ctaaaaattt ttcaaataaa
     3421 aaagaaaaca agctcagcct ttccatggta aaggtcaagg aagagaaaac tattattcct
     3481 atctctgaag gatgcctcgg tgattgtacg ttttgcagcg tgaaacttgc acggggaagg
     3541 ctcagatcgt atcgtgttgg cgacattgtt cgtgccatgc agggaaaaac aatatacttg
     3601 acatcacaag actgcggatg ttacggcttt gatataggaa caaacctcgc agaactctta
     3661 cgtgaagtgg ttgacgtc
//
LOCUS       DATDZU010000011         5887 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_60711, whole genome shotgun sequence.
ACCESSION   DATDZU010000011 DATDZU010000000
VERSION     DATDZU010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5887
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60711"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1100)
                     /locus_tag="VJJ79_00355"
     CDS             complement(<1..1100)
                     /locus_tag="VJJ79_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22208.1"
                     /translation="MKWKQAVFLAVLIILLLTVYILNKNIETTSGDQIHLAIGDTNAN
                     DPNLKPLLGVISGPDQPEDSSAPTLTEQYHDIGVTSIRNNDYYDDRLDIEGIFNCGGK
                     TYPSWAGCDPENDAYYNWEKSDAQFQSYINGDFEPFLRLGGEWENGNTNHDFKGPQNE
                     EQEINWIRAAEKVVDRYYRWDGKQRFTYLDIWTEFPGSHFWDRSNKDFYHFWGDAYSV
                     LHEEYPDLKIGGPGFNAGATLQVIEGEDGPAEEFMSYMYSQKIKPDWIGWHIFQNTPE
                     SWKEAAEAYQELIDGTGRYKHVAWAGTGFFNGVEQIVDAYGASDLELNENGEIEELSA
                     KETVNIHNKQKGAAILTGAWIEMQYGPIERAY"
     gene            1258..1407
                     /locus_tag="VJJ79_00360"
     CDS             1258..1407
                     /locus_tag="VJJ79_00360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22209.1"
                     /translation="MASVENQILFIAYVTLAGVLAMIYGLRRIFLLEKKIVSLEKAIV
                     GKKRR"
     gene            complement(1404..1925)
                     /locus_tag="VJJ79_00365"
     CDS             complement(1404..1925)
                     /locus_tag="VJJ79_00365"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012176034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HLC22210.1"
                     /translation="MDELKVLIRTVPDFPKKGIMFKDITPLLQHPEGLRQVMKYFKVR
                     YKGRKINKVAGIESRGFIFGAALAHMLGVGFIPIRKPNKLPAEKERVEYALEYGTDAL
                     EIHRDAILLGEKVLVVDDLIATAGTLIATIDLIEKLGGEVVECATIIELSDLHGRDKI
                     ETRGHTLFSMLEY"
     gene            complement(1970..3439)
                     /locus_tag="VJJ79_00370"
     CDS             complement(1970..3439)
                     /locus_tag="VJJ79_00370"
                     /inference="COORDINATES: protein motif:HMM:NF003338.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase family protein"
                     /protein_id="HLC22211.1"
                     /translation="MKLKVKDVNLSTGGPLVAVLHEKTARKLNIYPTDRLSIRRVKRG
                     NRITSVVNISSMGIREDEIGLFEEILKKLNVTEGTHVEIDIAERPKSLAFIKKKLEGK
                     ELDEKEFTQIIKDVMNNEFSDVELTYFVSACYSRDFSISETVALTNAIVENGNRLHFK
                     DKIILDKHCIGGIPGNRTSLILIPIIASLGYKMPKTSSRAITSAAGTADTFEILAPVT
                     LSIKKIQKVVNKTNACIVWGGTGDLAGADDKLIKIRYPLSIDPTGMLIASILAKKKAA
                     GATHVLIDIPWGKGAKAETKKQALELKRAFKKVSKLLGLKIRIILTDGSHPIGHGIGP
                     ALEASDVISVLKGDGPEDLREKAVFMATEMLKLVGEKDPLKKVLDVLESGKAYEKFRE
                     IIIAQGGLQRPIIPKAKYFFDILATRNGVVKGIDNKNIAKVARFAGAPEDKAAGVYIH
                     VHIKTKVKKGTILFTAYSNSQQNLEIVKKQLKEGNPISY"
     gene            complement(3429..4430)
                     /locus_tag="VJJ79_00375"
     CDS             complement(3429..4430)
                     /locus_tag="VJJ79_00375"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HLC22212.1"
                     /translation="MKAEINRYIKYALIIILAVLAFVVVQPYVMAIVGSIILAYMVRP
                     VQRWLKKYLNNETLVATIITIALIVVVLVPLAFLASFLIQEAAVLYQATSVGNIEKTI
                     TSILNIELSDTAKAYIEDITRSVASFLFSKASAFLLSVPEKIINVFIALFVLFYTLRD
                     GEKLYNKFISVIPIPESYRNRFVKKFETTVASLFYGEITLAFVGGIVATVGFYFLGVS
                     SPIIWGIVVGLAAILPGIGPTIAWVPLTIIAYVQGDTTRAILIGLFGFLILSLLLDTL
                     FKAHILGIKGKIHPLVIMVGVLGGLTAFGLLGLILGPLILVLLEVAIEIYMETKDEA"
     gene            complement(4481..>5887)
                     /locus_tag="VJJ79_00380"
     CDS             complement(4481..>5887)
                     /locus_tag="VJJ79_00380"
                     /inference="COORDINATES: protein motif:HMM:NF012246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016984 - ribulose-bisphosphate
                     carboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RuBisCO large subunit C-terminal-like
                     domain-containing protein"
                     /protein_id="HLC22213.1"
                     /translation="DSMAVQLNYLAPKGWKPRNPDENYLITFLKIELDETALKEAKKK
                     SKIKIFEEAAASIAAESSTGTWTKVYAGKGSGILRATKERALAFDLDYKNFMFKVAYP
                     VTLFEPDNISGLLAGIVGNIAGMKMVRAMRMFDVRFPRKIIQAFPGPKYGINGIRKRL
                     GKPCGPLLVTVPKPKIGRTAKEQANLARILFTSGRGTYDGIKDDENLTSLSFNTFDER
                     VRLVFKELKAAENKTKHRKFYLCNISHSNLDVMEKHAKLLQKHDSVFMMMDVICTGFA
                     AVDTMRRKNLSLAIHAHRAMHGFITRDNSPGVHGKGRIFGFSISMIVLAKLFRLLGVD
                     SLHGGSPLAKMEDYGEASYIQHVLQEKNLKPDHSIPSLGQKWFHIKPVWITASGGLHP
                     GDVEEVVRVLGEDVIIQCGGGLLGHPWGVEAGVCALEQALELAVKKIPFKQWVKKHPN
                     SELAAAIKLWGYGPRIVY"
BASE COUNT         1445 a         1311 c         1240 g         1891 t
ORIGIN      
        1 tagtaagctc gttcgatagg tccgtattgc atttcaatcc atgctcccgt aagaattgcc
       61 gcaccttttt gtttattgtg gatgttgact gtttcttttg cggataactc ctcgatttcc
      121 ccattctcat ttagctcgag atcagatgct ccatatgcat ctacgatttg ttctaccccg
      181 ttgaaaaaac cggttccagc ccatgcaaca tgtttatatc ttcctgttcc atcgattaac
      241 tcttggtatg cttctgctgc ttctttccag ctttcaggtg tattttggaa gatgtgccaa
      301 ccaatccaat cgggttttat tttttggcta tacatgtatg acataaactc ttcggcagga
      361 ccatcctctc cttcaataac ttgtagcgtt gctccggcat tgaaacctgg gccccctatc
      421 tttaagtcag ggtattcttc atgtaagaca ctatatgcat ctccccaaaa atggtaaaag
      481 tctttattgc ttctatccca gaagtggctt ccaggaaatt ctgtccagat gtcgagatac
      541 gtaaatcgct gttttccatc ccatctataa tacctatcga ctactttttc tgccgcgcgt
      601 atccagttta tttcctgttc ttcattttgt ggtcctttaa aatcatgatt ggtgttaccg
      661 ttttcccatt ctcctccaag tcgtaagaaa ggttcaaaat ctccattgat ataactctga
      721 aattgtgcgt cgctcttttc ccagttatag tatgcgtcat tttctggatc gcaccctgcc
      781 catgagggat atgttttccc gccacagtta aagattcctt ctatatctag tcgatcatca
      841 tagtaatcat tatttctaat gcttgttact ccaatatcgt gatattgctc tgtgagcgtt
      901 ggtgctgatg aatcctcggg ctgatctggt ccggatataa cacctagcaa tggctttagg
      961 tttggatcgt tagcgttagt atctccaatg gcaaggtgga tttggtctcc actggttgtt
     1021 tctatatttt tgtttaaaat gtaaactgtg aggagaagta ttattaaaac tgcaaggaat
     1081 actgcttgtt tccacttcat acttttaggt gtgatctttt tctttaaata attgcttgtg
     1141 gctttgtgaa aaaagtagct gcaatattaa tataggtacc attaaaatat gtccgtacga
     1201 aatcttagaa aactatttaa acaagtatgt tctaaaatgt gtattagtgg tgattgcatg
     1261 gcatctgtag aaaatcaaat tctttttatt gcttatgtca cgttagctgg tgtacttgcg
     1321 atgatctatg gtcttcggcg catattcctt ctagagaaaa aaattgtcag cttagaaaaa
     1381 gccatcgtgg gaaaaaaacg ccgttagtat tcgagcattg aaaataatgt atggcctctt
     1441 gtttctatct tatctcttcc atgcaagtca gataattcaa tgattgttgc acattctact
     1501 acctcgccgc caagcttttc gatgagatcg attgttgcaa tcaacgtacc agccgttgca
     1561 atcaaatcgt ctaccaccaa tactttttcc ccaagcagaa ttgcatccct atgtatctct
     1621 aatgcatctg ttccatattc taatgcatat tcaacacgct ctttttccgc aggaagttta
     1681 ttgggttttc tgatgggaat aaagccgacg cctagcatat gcgcaagcgc tgcaccgaag
     1741 ataaaccctc tgctttcaat gcccgcaacc ttgttgatct ttcttccttt gtagcgaact
     1801 ttaaaatatt tcatcacttg ccttagtcct tcaggatgct ggagtagcgg cgtgatatcc
     1861 ttgaacataa ttcccttctt tggaaaatct ggaaccgtac ggatcagtac cttgagttcg
     1921 tccatgatgg agaaaaagaa aatgtactta ttaaggattg ttgtcttttt tagtagctaa
     1981 taggatttcc ttcttttaac tgtttcttta caatctccaa gttttgctgg ctattgctgt
     2041 aggcggtgaa caatatagtt ccttttttta cctttgtctt gatatgcaca tgaatgtaca
     2101 cgcccgctgc cttgtcttct ggtgctccgg cgaaccgtgc aacttttgca atgttcttgt
     2161 tgtcaattcc tttcactacg ccatttcgtg ttgccaggat gtcaaagaaa tattttgcct
     2221 taggaatgat gggacgctgg agaccgccct gtgctattat gatctcacga aacttttcat
     2281 atgcttttcc tgactccaaa acgtctaata cttttttcag cgggtctttt tccccaacga
     2341 gcttgagcat ttctgttgcc atgaatactg ctttctcgcg aagatcttcc ggaccgtccc
     2401 ctttcaagac agaaataaca tcgcttgctt cgagtgctgg accgatgccg tgaccaatgg
     2461 gatgcgagcc gtcggtgaga atgatgcgaa tctttaagcc gaggagtttg ctgacctttt
     2521 tgaatgcgcg cttgagctcg agcgcttgtt tttttgtttc tgcctttgct cctttccccc
     2581 aggggatgtc aatcagtaca tgcgtcgcgc cagcagcttt cttttttgcg aggatgcttg
     2641 caataagcat gcccgtcgga tcgatgctta atgggtagcg gattttaatg agcttgtcgt
     2701 ctgcacctgc aaggtcgcca gtgcctcccc atacaatgca tgcatttgtt ttattcacaa
     2761 ccttttgtat tttctttatg gaaagcgtta ctggcgcaag gatctcaaat gtgtcagcag
     2821 tgccagcagc ggaagtgatt gcacgtgacg atgtttttgg catcttgtag cccagcgatg
     2881 caataattgg aatgagaatc aagctcgtcc tgtttccagg aatgccaccg atgcagtgct
     2941 tatcaagaat tatcttgtct ttaaaatgca accggttgcc gttttcgacg attgcattgg
     3001 tgagcgcgac tgtttcagaa atagaaaagt ctctactata acatgctgag acaaagtagg
     3061 tgagctcgac gtcggagaac tcgttgttca tgacatcttt gataatctgt gtaaattctt
     3121 tttcatcaag ttcttttcct tccaacttct tttttatgaa tgcaagactc tttgggcgtt
     3181 ctgcgatatc tatctcgacg tgcgtccctt ctgttacgtt taactttttc agtatttctt
     3241 caaaaagtcc aatctcgtct tctcgaatgc ccatgcttga aatattcacg acgctggtga
     3301 tcctgttccc acgtttcact cgccggatgc tgagcctgtc cgtgggataa atattcagct
     3361 tgcgagctgt cttttcatga agcactgcta ccaatggacc gcctgtagaa aggtttacat
     3421 ctttgacctt aagcttcatc tttcgtctcc atgtaaatct ctattgcaac ttcaagtagg
     3481 acaaggatga gtggaccaag gattaatccc aagagaccga atgcagtgag tccgccaagg
     3541 acgccaacca tgatgacgag tggatggatt tttcctttta ttcctaatat atgcgccttg
     3601 aagagcgtgt ctaacaatag cgataggata aggaagccga agaggcctat gaggattgca
     3661 cgcgtggtat ctccttgtac gtatgcaatg atggtgagcg gtacccatgc aattgttggt
     3721 ccaatgccag gaagaatcgc tgcaagtccg acgacaatgc cccagatgat cggagatgaa
     3781 acgcctagga aataaaagcc gactgtagca acaattcctc cgacgaacgc aagcgtaatt
     3841 tctccgtaga acaatgacgc tacagtggtt tcaaattttt tgacaaacct atttcggtaa
     3901 ctttctggga taggaataac gctgatgaac ttattgtaca gcttttctcc gtccctgagc
     3961 gtgtagaaca aaacaaaaag ggcaatgaat acgttgatga ttttttccgg cactgacagc
     4021 aggaacgccg atgctttgct gaaaaggaaa ctggcaacgc tgcgcgtgat atcttcgatg
     4081 tacgcttttg cggtgtcact gagttcgata ttgagaatac ttgtaattgt cttttcgatg
     4141 tttcctacgc tggttgcctg gtacaacact gctgcttcct ggataaggaa actcgcgagg
     4201 aaggcaagcg gaacaaggac cacgacgata agagcgattg ttattatcgt tgcgaccagc
     4261 gtttcgttat tgagatattt ttttaaccat cgttgtacag gacggaccat gtacgcgagg
     4321 atgatgctcc ctacaatcgc catgacgtac ggttggacga ctacaaaagc gaggaccgca
     4381 agaatgatga tgagcgcgta cttgatatac ctgttaatct ctgctttcat actcttttaa
     4441 tttgtgttat agaatatata aatttgttcc tttcaaactt tcaatataca atcctcggac
     4501 cgtagcccca gagctttatt gctgcagcga gttctgaatt gggatgtttc tttacccatt
     4561 gtttgaacgg aatctttttc actgccaact ccagtgcttg ttctaatgcg cacacgcctg
     4621 cttccacgcc ccaaggatgg ccgaggagac cgccaccaca ttgaataatc acgtcttctc
     4681 ccaaaacacg aacaacttct tccacgtcac cagggtgtaa tcctcctgat gcggttatcc
     4741 atactggctt aatatggaac catttttgtc cgagagaagg aattgaatga tcaggcttga
     4801 gatttttttc ctgcagcacg tgctgaatat acgatgcttc gccataatct tccatttttg
     4861 ctaatgggga gccgccatga agcgagtcca cgcctaaaag acggaacagt tttgcaagga
     4921 caatcattga aatggaaaag ccaaagattc ttccctttcc gtgtactcca ggggaattgt
     4981 cgcgcgtgat aaacccgtgc atggctcggt gtgcgtggat cgctagcgat agattttttc
     5041 gtcgcattgt atcgacggcg gcaaagcctg tgcatatcac gtccatcatc atgaagacgc
     5101 tgtcatgttt ttgcagaagt tttgcatgtt tttccattac gtcaagattt gagtgtgaaa
     5161 tgttgcaaag gtaaaacttc ctgtgctttg ttttattttc tgctgctttt aattctttga
     5221 ataccaaccg gactcgttca tcaaatgtgt taaaggaaag acttgtcaga ttttcgtcat
     5281 ctttaatgcc gtcgtacgtt cctctgcctg acgtgaacag aatgcgcgca aggtttgctt
     5341 gctcttttgc cgttcgtcca atctttggct tgggtaccgt cacaagaagt ggaccacatg
     5401 gttttccgag gcgtttccga attccattga taccatactt aggtcctgga aatgcttgga
     5461 taatttttct cgggaagcgc acatcgaaca tgcgcatggc acgaaccatt ttcatcccag
     5521 caatgtttcc cacaatccct gcaagaagac cagaaatatt atcgggctcg aatagtgtca
     5581 ctgggtacgc gactttgaac atgaaatttt tatagtctag atcgaatgca agcgcgcgtt
     5641 cctttgttgc gcgaagaatg cctgaacctt tccctgcata gactttggtc caagttccag
     5701 tcgatgactc ggcagcgata gaggcggcag cttcctcgaa aatttttatt tttgactttt
     5761 tttttgcttc ttttagcgct gtttcatcaa gctcgatttt gagaaaggta atcagatagt
     5821 tttcatcggg gtttctgggc ttccatcctt ttggtgcaag atagtttaac tggacagcca
     5881 tggaatc
//
LOCUS       DATDZU010000012         2101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1968041, whole genome shotgun sequence.
ACCESSION   DATDZU010000012 DATDZU010000000
VERSION     DATDZU010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968041"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VJJ79_00385"
     CDS             <1..245
                     /locus_tag="VJJ79_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HLC22214.1"
                     /translation="ISTSGNSPNVLKGIEAAKAKNAKVVGFTGKTGGKMIDTPIDLLI
                     KIPSTDVARIQEAHMKIGHIMCSLVEKELFQEKIFE"
     gene            247..1266
                     /locus_tag="VJJ79_00390"
     CDS             247..1266
                     /locus_tag="VJJ79_00390"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22215.1"
                     /translation="MGIVTLSPARICLGNGGDTDYYLKEIGWGCIVNASLSSLFFQCE
                     IKDYPERAVIYHDLFHETQEINLVPHLRLDGGKLDLIKATISYLHPNFHGALEITTNI
                     PKESGLGGSSTLSVAIAHALLKEKGEPTNPEELARIAYYVERKILQIEGGYQDQWAAA
                     YGRGLNLMIFKNKRVEVTPLTISRDNLKRLEENSLLVYFPKKANSGNEIHGDQRKKLE
                     EDKETMRGIMIEKRTNTLSIKNALEKGDFETFAQLLNKDWELKQKLSDKLEVRDDIFT
                     TALQHGAIGGRLCGAGIGGAYYFYCKEGKKQQVLDAIKEKIHLQLPFRIQRPDEQGNQ
                     YVIRK"
     gene            1269..1829
                     /locus_tag="VJJ79_00395"
     CDS             1269..1829
                     /locus_tag="VJJ79_00395"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLC22216.1"
                     /translation="MPQKFIFLDRDGVINLDNGNINKKEDIELIYGAANAIRLLNENN
                     YTTLVITNQAVVAYGSCTIDDVQEMHTHLNNLLENEGAHIDVFYFCPHHPTKGTNPLY
                     TQPCGCRKPAPGMILQAQEDFQIQDLSLCYLVGDKTCDILAGSYVGCKTIMVKTGSAG
                     LDGRYTIRPMYRAEDLNDAVQNIILR"
     gene            1826..>2101
                     /locus_tag="VJJ79_00400"
     CDS             1826..>2101
                     /locus_tag="VJJ79_00400"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLC22217.1"
                     /translation="MKLFINAGGKGTRLYPLTKNIPKGMITLAGKPILHHIIDWGKKN
                     EINEIVIMSGYLADNITNYFKDGKEFGVKITHSIEQKPLGTGGAIKFA"
BASE COUNT          736 a          417 c          461 g          487 t
ORIGIN      
        1 caatcagcac ctcaggaaac tcgccgaatg tgttaaaagg aattgaagct gcaaaagcaa
       61 agaacgctaa agtagttggc tttactggaa agacgggagg aaaaatgatt gataccccta
      121 tagacctcct gatcaagatt ccttccacag acgtcgcacg gatacaagaa gcgcatatga
      181 aaatagggca cattatgtgc agccttgtgg aaaaagaact attccaagaa aaaatatttg
      241 agtaacatgg gaatcgtcac actttcccct gcgcgtattt gtttaggaaa cggaggagat
      301 actgattact atctcaaaga aattggatgg ggctgcattg ttaatgcaag tctgagttct
      361 cttttttttc agtgcgagat taaggactat ccggaacggg cggtcatata ccacgacctc
      421 tttcatgaaa cacaagaaat aaatctagtg cctcacttgc ggttagatgg cggaaagtta
      481 gacttgatca aggcaacaat ttcttacttg catccaaact ttcatggtgc cttagagatc
      541 accacaaaca ttcctaaaga atcaggtcta ggtggttcat caacattaag cgttgctatc
      601 gcgcatgcat tgctgaaaga gaaaggcgaa ccaacaaacc ccgaagaact cgcgagaatc
      661 gcctattatg tcgaaagaaa aatcctccag atcgagggag gataccaaga ccagtgggca
      721 gctgcgtacg gtcgcggtct caacctcatg atattcaaaa ataaacgcgt cgaggtaaca
      781 ccgctaacaa tctctcgaga taacttaaag cgtctggaag aaaattctct tctcgtatat
      841 ttcccaaaaa aagcaaactc agggaatgag attcatggtg atcaaaggaa aaaattggaa
      901 gaagacaaag aaacaatgcg aggcatcatg atcgaaaaaa gaacaaacac attgagcata
      961 aaaaatgctc tcgagaaagg tgattttgaa acgtttgcgc aattgttaaa caaagactgg
     1021 gagctcaaac aaaaactcag cgacaagctg gaagtacgtg acgacatttt tacaacagca
     1081 ctgcagcacg gtgctatcgg tggaaggcta tgtggagcag ggattggcgg agcgtattac
     1141 ttttattgca aagaaggaaa aaagcaacaa gtcttagacg caatcaaaga aaagatacac
     1201 ctgcagctgc catttaggat ccagcgaccg gacgaacagg gcaatcaata tgtgataagg
     1261 aagtaaaaat gccacaaaaa tttatttttt tagaccgaga cggcgtgatc aacctcgaca
     1321 atgggaacat taacaaaaaa gaagatatcg agcttattta cggcgctgca aacgcaatta
     1381 gattactcaa tgagaacaac tacacaaccc ttgttataac gaaccaggca gtagttgcat
     1441 atggaagttg taccatcgat gatgttcaag aaatgcacac acatcttaac aatcttttag
     1501 aaaatgaagg agcacatata gatgtgtttt atttctgtcc gcatcatcca acaaaaggga
     1561 caaatcctct gtatactcaa ccatgcggat gtagaaaacc agcacccggc atgatcctcc
     1621 aagcgcagga agattttcaa attcaggatc tttctctctg ttatcttgtt ggagataaaa
     1681 cctgcgacat tctcgccggg tcgtacgtcg gctgtaaaac tattatggta aaaacgggca
     1741 gtgctggttt agatgggcga tatactatcc gaccgatgta tcgtgcagaa gatttaaatg
     1801 acgctgtgca gaacatcatc ctacgatgaa actatttata aatgcgggag ggaaagggac
     1861 gcggctgtac ccattaacaa aaaatattcc taaaggaatg attacactcg caggaaaacc
     1921 gattctccat cacataattg attggggaaa aaagaacgaa ataaacgaaa ttgtcatcat
     1981 gagtggatat ctcgcagaca atatcaccaa ctatttcaaa gacggaaaag agtttggagt
     2041 aaagataacg cattctattg agcaaaagcc gttagggact ggaggcgcaa taaagtttgc
     2101 a
//
LOCUS       DATDZU010000013         5088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_434150, whole genome shotgun sequence.
ACCESSION   DATDZU010000013 DATDZU010000000
VERSION     DATDZU010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5088
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434150"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..570)
                     /locus_tag="VJJ79_00405"
     CDS             complement(1..570)
                     /locus_tag="VJJ79_00405"
                     /inference="COORDINATES: protein motif:HMM:NF017820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HLC22218.1"
                     /translation="MKDHKLKKDLSPELQKIISHEKWLMEILRTVRDLQLPDWYLAAG
                     VIRNTVWDVLHGYKKRTQLNDIDVVYFDPHKKFQENEIKKKLKKIYPQYSWDVVNQVF
                     VHKTYVYKRPVKSSCEAIAHFVEVPTCVGVRLEKDNSLTVCAPHGLRNLFFFLVVPAP
                     YSNLKRYRERMKKKQWKKIWPKLHISSIS"
     gene            complement(567..1976)
                     /gene="gatE"
                     /locus_tag="VJJ79_00410"
     CDS             complement(567..1976)
                     /gene="gatE"
                     /locus_tag="VJJ79_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008083858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase subunit GatE"
                     /protein_id="HLC22219.1"
                     /translation="MDYQELGFKAGLEIHQQIEGLKLFCRCPALVNDDATPNISFKRK
                     LRAAAGEMGVFDKAALYEMKKDKVYEYDACSSSSCLIEADEEPPMEVNKDALQVALEV
                     ALLLHAHIVDEIHFMRKTVIDGSNVSAFQRSALVATDGYIDTSKGRVSIPTICLEEEA
                     AKKLEEKPHVVHYRLDRLGVALVEIATDASIKDPEHAKEVASLLGMVLRSTGKVKRGI
                     GSIRQDVNLSTKGHPRVEIKGFQELRYMPLVIENEVKRQMKEKGDAHVRKANPDGTTT
                     YLRPMPGAARMYPETDVPPIIVTKELIHSLTLPELLDEKALRLEKRYKLSADLAREIV
                     HEEIPLETYLVFSSLEPAFIAQVLVNYPKEIKKRYNLDALQLREEDYKQVLGCLDQKQ
                     IAKEAVLDLLVDILQGKGLNIAKYKTVDEGTLEKELKALAKANPGAPLNALMGDAMKK
                     FRGKVDGKKIMDILRKLSS"
     gene            complement(2012..2335)
                     /locus_tag="VJJ79_00415"
     CDS             complement(2012..2335)
                     /locus_tag="VJJ79_00415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22220.1"
                     /translation="MKNMCQAYEGERNYIVAGENIATKRGFAAAKLHKPKDSNPFYSL
                     GIYDREAWNHGWESWHERLLPWALDREYRKITGAWQTQDIQQQFKDTGKLPDKLETIL
                     AKYSY"
     gene            2420..3064
                     /locus_tag="VJJ79_00420"
     CDS             2420..3064
                     /locus_tag="VJJ79_00420"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HLC22221.1"
                     /translation="MRKKFIFIVPLVLLIIFLFWSSVTLQGLFSDVVGVVEGYIIERP
                     LLGVSFFLVLAAVSAFLSPFSSFPLIPFAIPIWGEVITIILLTIGWLLGGLIAYAVGR
                     YAGYPILLRLIPLDKIEKAQEHIPEDLAFKVVVLFRLAMPSEITSYILGILRYKFWHY
                     FWATLISELIFAILAVYVSSAVIGQKPLLFVSWLLAIIIVFVGTFYLIRRNSEK"
     gene            complement(3053..3781)
                     /locus_tag="VJJ79_00425"
     CDS             complement(3053..3781)
                     /locus_tag="VJJ79_00425"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HLC22222.1"
                     /translation="MLVDVHTHVTDPAFDSDRKEIIEQSGCVALINNGYTPQDNEKTI
                     ALAKKYSLIKVALGLHPSETKHMSSKDVDNVISFIARHKPFAIGEVGLDGTYENMDQQ
                     IAAFKKFIALAIKKDRPIIVHSRKAELLVVDMLEAAGAKKVILHCFSGKLKLAERAEK
                     LGWYFSIPPIIRHSTHFQELVKKISLTRLLTETDAPYLAPEKGTRNEPKNVSVVVGTI
                     AEIKGLDPKEAENAIYMNYQRLFF"
     gene            complement(3818..4696)
                     /locus_tag="VJJ79_00430"
     CDS             complement(3818..4696)
                     /locus_tag="VJJ79_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22223.1"
                     /translation="MRSMLKTFPIILASGMLFMPRDASAGIYLFNQYSLAFGIGSRPL
                     ANVEHGLEDYLAERGYTEQFSGLAESFKLRDSLTYVVCDFSFIQPKLHLWQRDTVQFL
                     TEVNLSSSKFSSTIDTGKDYFPLNYDEVDLGDMGVDWEIDLPLYLAVAEGIVYTPVTY
                     PIGWFHVAPQVVLTGGYGYFHANVDINMNYAPSELMQEVIDQFGQEWFDENVGIPSKQ
                     TISTTLDGHGFFAHPRIGFDVGYGNINLILRGGFRFEHSFVKVVESLNGKQIHAGDAD
                     LNINGWTSEVLLKYTF"
     gene            4778..>5088
                     /locus_tag="VJJ79_00435"
     CDS             4778..>5088
                     /locus_tag="VJJ79_00435"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HLC22224.1"
                     /translation="MDIIAQEFKTPGNIGALARVMKNFDFHSFVLYKPRCNHLSKEAL
                     DRAKHAKNIVQNAKVVDVLEYDVLIGTTAIIGTDYNVRRNSLSPEKLATMEFHGKVGL
                     L"
BASE COUNT         1416 a         1128 c          948 g         1596 t
ORIGIN      
        1 ttaagaaata gaagaaatgt gtaacttggg ccaaattttc ttccactgtt ttttcttcat
       61 tcgttctcta taccgcttaa gattagaata aggagcagga acaaccagaa aaaagaagag
      121 attgcgaaga ccatgaggag cacaaaccgt tagagaatta tctttttcta ggcgtacacc
      181 aacacacgtt gggacttcta caaaatgagc aattgcctca catgaacttt tcacaggacg
      241 tttatagaca tacgttttat gcacaaacac ctgattgaca acatcccaag agtactgggg
      301 atatattttc tttaattttt tctttatttc attctcctga aacttcttat gaggatcaaa
      361 gtaaacgaca tcgatatcat tcaattgcgt tcttttctta tagccatgca acacatccca
      421 aacagtattt ctaatgacac cggccgcaag ataccaatca ggaagctgca aatcacggac
      481 agttctaaga atctccatca accacttttc atgggagata attttttgta actctggaga
      541 taagtctttc ttgagtttat ggtctttcac gagctcaact tccttaaaat atccataatt
      601 ttttttccat caactttccc tctaaacttt ttcattgcgt cgcccatcag cgcgtttaaa
      661 ggtgcgcccg ggtttgcttt ggcgagtgct tttagttctt tctctaacgt tccttcatca
      721 actgttttat acttcgcgat attcagtcct tttccttgca atatatcgac aagtaggtca
      781 agcactgctt cttttgcaat ctgtttctgg tccagacagc caagaacctg tttatagtct
      841 tcttcgcgta attgtaaggc atcaaggttg taccgttttt tgatttcttt tggataattc
      901 acgagcacct gtgcaataaa tgctggttct aatgaggaaa atacaaggta ggtttccaat
      961 ggaatttctt catgcacaat ttcccgcgca aggtctgcag aaagcttgta ccgtttttcg
     1021 agtcgcaatg ctttttcatc gagaagttca ggaagcgtga gagaatgtat taattctttg
     1081 gtcactatga ttggcggaac atccgtctct gggtacatcc gcgcagcgcc aggcatgggc
     1141 cgtaaatatg tcgttgtccc atctgggttt gctttcctca cgtgtgcatc ccctttctct
     1201 ttcatctgcc gcttgacttc attttcgatc accaatggca tgtacctaag ctcttgaaac
     1261 ccttttatct ccacacgcgg atggcccttc gtggacagat ttacatcttg ccgaatgctc
     1321 ccaatgccgc gcttgacttt tcctgtgctc cgcaggacca ttcctaaaag tgacgcaact
     1381 tctttagcat gttctggatc tttaatcgac gcatcagtag caatttcaac gagtgcaacg
     1441 ccgaggcgat ctaacctata gtgaaccacg tgaggttttt cttccagttt ttttgcagct
     1501 tcttcttcta aacaaattgt cggaatgctc acacgcccct tgcttgtgtc gatataacca
     1561 tcagtggcaa ctaacgcact tcgctggaag gcagagacgt tgctcccgtc aataaccgtc
     1621 ttccgcatga aatgaatctc atcaacaatg tgcgcatgaa gaaggagtgc aacttccaat
     1681 gcaacctgta acgcatcttt attcacttcc attggcggtt cttcatcagc ctcgatgaga
     1741 caactagaac tggaacaggc atcatactca tagaccttat cttttttcat ttcgtagagc
     1801 gcagctttat caaatactcc catttcccct gcagccgcac gaagttttcg tttgaatgaa
     1861 atgtttgggg ttgcatcatc gttcacgaga gcaggacaac gacagaataa tttcagccct
     1921 tcaatttgct gatgaatttc tagacctgct ttaaatccaa gttcttggta gtccatagaa
     1981 agtagaagag aacgaaactt taaataattt cctaatagct gtactttgca agaattgttt
     2041 ctaatttatc tggtaatttc ccagtatcct taaattgctg ttgtatatct tgtgtttgcc
     2101 acgctccagt tatttttcga tactctctat ctagagccca aggcaataac cgttcatgcc
     2161 aggattccca tccatggttc catgcctctc tatcatatat gcccaacgaa taaaacggat
     2221 tagaatcttt tggcttgtgt agcttcgctg cggcaaaacc tcttttcgta gcaatgttct
     2281 caccagcaac gatataattt ctttctcctt catacgcctg gcacatattc ttcataaaat
     2341 atcttatctt taaatgaatt tctattcctt gagtagaaat accgacacct tttaaaagaa
     2401 tagttcattt tgtaaggata tgcgcaagaa attcatcttt attgttcctc ttgtactgtt
     2461 gattatattc ttgttctggt cttcagtaac gttacaaggc ttgttctctg acgtagtcgg
     2521 tgtagtagaa gggtatatta tagagagacc tcttctcgga gtaagctttt tcttagtact
     2581 cgccgcggtc tctgcatttc tctcgccatt cagcagcttt ccattaattc cttttgcaat
     2641 tcctatttgg ggcgaggtca taacaattat cttgttaaca atcgggtggc ttctcggggg
     2701 attgattgcg tatgctgttg gtcgctatgc aggctatccc attcttctgc gccttattcc
     2761 tctcgataaa atagaaaaag cgcaggaaca tattcctgaa gaccttgctt ttaaggtggt
     2821 agttctgttc cgtctggcga tgccctcaga gattacaagt tatatactcg gaattcttcg
     2881 atacaagttt tggcattatt tctgggccac actcatttca gagcttatct ttgcaattct
     2941 tgcagtctat gttagtagcg cagtgattgg acagaaacca ttgctctttg tttcttggct
     3001 gcttgcaatc atcatcgtat ttgtaggaac cttttacctt attcgaagaa actcagaaaa
     3061 ataatcgttg atagttcata taaatagcgt tctctgcttc ctttggatca agtcctttta
     3121 tctctgcaat tgttcccaca accacactaa cattttttgg ctcatttcgt gttccttttt
     3181 ccggcgcaag gtaaggcgca tctgtttctg taaggaggcg cgtaagagaa atttttttta
     3241 caagctcttg aaaatgagta gagtgtctta tgatgggcgg aattgaaaag taccagccaa
     3301 gtttttctgc gcgttctgca agtttcaatt tcccactaaa acaatgcagt ataacttttt
     3361 tcgcgccggc tgcctcgagc atatcaacca cgagtagttc tgcttttcgc gagtgaacaa
     3421 taataggtct atcttttttt atcgctaacg caataaattt tttgaacgca gcaatttgtt
     3481 ggtccatatt ttcataggtt ccatccaagc caacttcacc aatagcaaat ggtttgtgtc
     3541 gtgcgataaa tgaaataacg ttgtcgacgt cttttgagct catgtgtttc gtttcactgg
     3601 gatgcaagcc aagggcgact ttaattaggg aatatttttt agccaatgca atcgtctttt
     3661 cattatcctg tggtgtatag ccgttattaa ttaatgcaac acagccagac tgctcaatga
     3721 tttcttttct atcagaatca aatgcaggat ctgttacatg ggtgtgaacg tcaacaagca
     3781 tagagagaaa aggacaaaac ttctttttaa atatatccta aaatgtatac tttaaaagaa
     3841 cttcactggt ccagccatta atattcaagt ctgcatcacc agcatgaatt tgtttcccat
     3901 taagggactc aacaactttg acaaagctat gctcgaaacg gaaacctcct cgcaaaataa
     3961 ggttaatatt gccatatccg acatcaaaac ctatgcgcgg atgcgcaaaa aatccatgtc
     4021 catcaagagt agtacttatc gtttgttttg acggaatgcc cacattttca tcgaaccatt
     4081 cctgaccaaa ctgatcaata acttcctgca taagctcact aggcgcataa ttcatattta
     4141 tatccacatt tgcatgaaaa tatccatagc caccggtaag tactacctgc ggcgcaacgt
     4201 gaaaccatcc aataggatag gtaactggtg tatacacaat accttctgca actgcaaggt
     4261 acaaaggaag atcaatttcc caatcaacgc ccatgtctcc caggtcaact tcgtcatagt
     4321 tgagaggaaa ataatctttt cctgtgtcaa tggtactaga aaattttgaa gagctaagat
     4381 tcacttccgt gaggaactgg acagtatccc tctgccagag atgcagcttt ggctgtataa
     4441 atgaaaagtc acacacaaca taggtaagcg aatcacgaag cttaaacgat tctgccagac
     4501 cggagaactg ttccgtatac ccacgttctg caagataatc ttccagtcca tgttcaacgt
     4561 tcgccaatgg ccgactacca atgccaaagg caagtgaata ttgattgaag agataaatcc
     4621 cagcagaagc atcacggggc ataaacaaca ttccagaagc aagaataatt gggaacgtct
     4681 tgagcatact tctcatgaat aatccaagat aactattttt taatccctta tataattatc
     4741 gttaacattt ataaataaat ccatactttt tggcagtatg gatattatag cacaagagtt
     4801 taagaccccg ggaaacattg gcgcactagc acgtgtcatg aaaaactttg acttccacag
     4861 ctttgttctc tataagccgc gctgcaacca cctatcaaaa gaagcacttg atcgggcaaa
     4921 gcacgccaag aatatcgtac aaaatgcaaa agtagtcgac gttttagaat atgatgtact
     4981 gattggaacc acagcaatta tcggcacgga ttacaatgtg cgacgtaatt cattatcacc
     5041 agaaaaactt gcgacgatgg agtttcacgg aaaagtgggg ttattgtt
//
LOCUS       DATDZU010000014         5213 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_850698, whole genome shotgun sequence.
ACCESSION   DATDZU010000014 DATDZU010000000
VERSION     DATDZU010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5213
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850698"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VJJ79_00440"
     CDS             complement(<1..506)
                     /locus_tag="VJJ79_00440"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22225.1"
                     /translation="MEPFVHAIIPLAFLLALFPALDKKYMLSLIPIVWIIDLDSYIGV
                     HRFTFHNIFFVLLMAGLVYLFWDKKAFFVALYYGFTHLFLDFAYPGSAWLYPLVPKTF
                     YLVSTVHKDLGHWIVNFSFGSLTLVEYLAFLQTVGPMRYIGEVSVLFLSLFALLLLVR
                     FRKKIFSFV"
     gene            612..1931
                     /gene="aspS"
                     /locus_tag="VJJ79_00445"
     CDS             612..1931
                     /gene="aspS"
                     /locus_tag="VJJ79_00445"
                     /EC_number="6.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF003483.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004815 - aspartate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006422 - aspartyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA(Asn) ligase"
                     /protein_id="HLC22226.1"
                     /translation="MRTHTCGELNKSHVGKDVTLSGWVATVRNYGKIAFIDLRDREGI
                     TQLFLNKDLAKEYSTLHPESVILVHGKVNARPANQVNQEMSTGAVEVEVKDLTLVTEA
                     EAPLPIEVKEDTTTQIDKRLDYRFLDVRREHVNSIFLVRSKILMATVEFFDKAGFVAI
                     QSPKLTASGVESGAEEFKLPYFGKTAALAQSPQIYKQMFVVSGLERVYEIGPVFRAEK
                     SHTTRHLTEFTGIDMEMGFIDSEEDVMKVVEHYFASLLSSLKKNSAEYFKKLGVTIDV
                     PKLPFPRLSLHEARKILMQKGKVMPENDDLDADAEKMIGEYVKEKYKTDFVFMLDYPW
                     AKRPFYHMQSDREKNCTKSFDLLYKGVEIGTGAQREHRLDILEKQAKEKGIDLKNMPF
                     YRDIFRFGCPPHGGVGLGLDRITAQMLDLSNVREAILLPRDPERLTP"
     gene            complement(1938..3032)
                     /gene="tgt"
                     /locus_tag="VJJ79_00450"
     CDS             complement(1938..3032)
                     /gene="tgt"
                     /locus_tag="VJJ79_00450"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR00449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HLC22227.1"
                     /translation="MFTLFKEDKNARAGILKTSHGEIETPFFMPVATKAVGRFVSVDD
                     YKQANAKAIISNAFLLSQDPGLEMFEKRKGIHNFMHFNGVIFTDCGGFQMLRENLLLS
                     TTENGIWFQTPSEKKIFIRPKTVMDIGKAIGGDIIMALDCVLPYGRTREEYIEALIKS
                     HTWSKECKDLHDMKQLLFGITQGGTFEDLREASAKAINSMNFDGNAIGGLGLGEPSAL
                     MYKIIDISVPHLDKNKPRYVMGIGKPEQILECVERGIDIFDSIYPQKNARHGMLFTFE
                     GIRDLGQAQYKYDEKPIEETCGCFTCKNFSRSYIRYLLKKEDPVGKRYLTIHNLFFMQ
                     EFMKRIRESILNGTFQTFKKEFLVKHKKIS"
     gene            3118..4422
                     /gene="asnS"
                     /locus_tag="VJJ79_00455"
     CDS             3118..4422
                     /gene="asnS"
                     /locus_tag="VJJ79_00455"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HLC22228.1"
                     /translation="MSSHKFVSIQEAITKGKGIVSVHGWCYRERGSNELKFIVIRDSS
                     NILQCVVEKSKVSPAVWKDANSVHIETSLEITGNLKKDDRAPTGYEITVKDLHIVGSC
                     DNFPIQKDQSIEFLADNRHLWLRSRKMTAILKIRSTVFGAIHHYFRDNDFYEFQSPIF
                     QPTQAEGGSTVFEVPYFGDTVYLAQTWQLQAEAAMFALEKIYTIAPSFRAEKSKTSRH
                     LTEYWHAEMEMAWCTFEDLQNHAEALLKSIVQTVLKENKKELNVLGRDVKKLEPLVKK
                     KFKRMTYDDALDLLKNKANISVPWGKDLRTVEEDALSELFDVPIIVTRYPKEVKAFYM
                     KEDPKNSKEVLGFDVIAPEHYGEIIGASQREENIDKIKENLIKHGEDPKNYEFYLDTR
                     RYGSVPHGGFGLGVERMVSWICGLDNIKDAIPFPRTMFRYRP"
     gene            complement(4473..>5213)
                     /locus_tag="VJJ79_00460"
     CDS             complement(4473..>5213)
                     /locus_tag="VJJ79_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204135.1"
                     /note="GTPase; similar structure to tubulin; forms
                     ring-shaped polymers at the site of cell division; other
                     proteins such as FtsA, ZipA, and ZapA, interact with and
                     regulate FtsZ function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HLC22229.1"
                     /translation="ADMVFVTAGMGGGTGTGAAPIVAQIAKEEKAIVIGAVTMPFEIE
                     RARIEKAEYGLQQLRDVCDTVIVIDNNRLVQIAGNLPIQQAFAVANELVSTMIKGIVE
                     IIAVPSLVNLDYADVKAIMANGDVSVIGIGESDSQNRVEEAVKRALSNPLLEVSYEGA
                     TGALIHVAGGDDLTLDEVNKVGNMITEALDEDANVIWGARISGDMKGRLRVMTIITGV
                     SSPYIVGKGKARPNQSKQMGQNLGIDFL"
BASE COUNT         1551 a         1052 c         1123 g         1487 t
ORIGIN      
        1 acaaatgaaa atattttttt tctaaatctt accagcagca ggagagcgaa aaggctaagg
       61 aataatacag atacttctcc aatgtaccgc ataggaccga cggtttgtaa gaaggcaaga
      121 tactccacta acgtcagaga gccaaaggaa aagttcacga tccagtgacc aagatcttta
      181 tgcactgttg agacaagata gaatgtcttt ggtactagtg gatacaacca tgccgaaccg
      241 ggatatgcaa agtccaagaa aaggtgcgtg aagccgtagt agagcgcaac aaagaacgct
      301 ttcttgtccc agaagaggta cacgagccct gccatcagca gcacgaaaaa gatgttatga
      361 aacgtgaaac gatgcacgcc tatgtatgaa tctaaatcaa taatccagac gataggaata
      421 agggagagca tatacttttt gtctagcgcc ggaaataatg ctaagagaaa tgctaacgga
      481 ataattgcgt gcacaaacgg ttccatctcc acctggaaag gataatggtt tttatagttt
      541 atgtttctat gagggattgt taggaaagaa cccagtaaaa cttataaagt tctgtttgtt
      601 tttcttctgc catgcgaaca catacctgtg gtgaattaaa taaatcccat gtcggaaaag
      661 acgttacatt aagtggctgg gttgctactg tacgaaatta tggaaagatt gcgttcattg
      721 accttcgtga tagagaaggc attacgcaac tgtttctcaa taaggatctc gcaaaggaat
      781 attcaacgtt acatcccgaa tctgttattc ttgtgcatgg aaaagtgaat gcgcgaccag
      841 caaaccaagt aaatcaagag atgagcactg gtgctgtaga agttgaagtc aaagatctca
      901 cgctggtaac ggaagcagaa gcgccattgc caattgaagt caaagaagat actacaaccc
      961 aaatcgacaa acgactcgat taccgattcc ttgatgtcag acgagagcat gtaaacagca
     1021 tcttcctcgt gcggtcgaaa atcttgatgg ctactgtaga gttcttcgat aaggcaggat
     1081 ttgttgccat ccaatcgcca aagctgactg cctccggtgt tgagtctggt gctgaagagt
     1141 tcaagctacc gtattttggg aaaactgcag cgttagcgca atcaccgcaa atatataaac
     1201 aaatgtttgt ggtatctggt ttagagagag tgtacgaaat tggacccgtc ttcagggctg
     1261 aaaagtcgca cacaacaaga catttgacag agttcactgg tattgacatg gagatgggat
     1321 ttattgatag tgaagaagat gtcatgaagg ttgttgaaca ttattttgca tcccttctat
     1381 cttccttgaa aaaaaactct gcagaatatt tcaagaaact aggtgtcact attgatgttc
     1441 caaaacttcc atttcctcgt ctctccttac atgaggcacg aaaaattctg atgcagaaag
     1501 gaaaagttat gccggagaat gatgacctag atgcggatgc tgagaagatg attggggagt
     1561 atgttaaaga aaagtataaa acagatttcg tgttcatgct agattatccc tgggcgaagc
     1621 gaccgttcta tcatatgcaa tctgatagag agaagaattg tacgaagtca ttcgatttgt
     1681 tatacaaggg tgtggaaata ggcacaggtg cacagcggga gcataggttg gatatcttag
     1741 agaagcaggc aaaagaaaaa ggtattgatt taaagaatat gccgttctat cgcgacatat
     1801 tccgattcgg ctgtccgccg catggtggtg ttggtcttgg gttagataga attactgcac
     1861 aaatgcttga cctctctaat gtacgtgaag caatcttgct gccacgtgat cctgaacggt
     1921 tgacacctta ggatatttta agaaattttc ttatgcttca ctaaaaattc ttttttaaac
     1981 gtttgaaatg ttccgttaag aatgctttcc cgtattcttt tcataaattc ttgcatgaaa
     2041 aaaagattgt gaatcgtcag gtaccgtttc cctacaggat cttctttctt taataaatag
     2101 cgtatgtagg aacgagaaaa attcttgcac gtgaaacagc cgcaggtttc ctcaatcggc
     2161 ttctcatcgt acttgtactg tgcttgacct aggtctcgta ttccttcaaa cgtaaagagc
     2221 atgccatgcc gtgcattttt ctggggataa atactgtcaa aaatgtcaat gccgcgttcc
     2281 acgcactcaa gaatttgttc tggcttgcca atgcccatga cgtaccgagg tttattcttg
     2341 tccaaatgag gaacagaaat gtcgataatt ttgtacataa gagctgatgg ttcgcctagc
     2401 cctaaccccc caattgcatt gccgtcgaag ttcatcgagt tgattgcctt tgcacttgct
     2461 tctctaaggt cttcgaatgt tcctccttgt gtgatgccga agagtagctg tttcatatca
     2521 tgaaggtcct tgcactcctt gctccacgta tgggatttta ttaaggcttc aatatattct
     2581 tctcttgttc tgccgtacgg aaggacacaa tcgagcgcca taatgatgtc accgccaatt
     2641 gcttttccga tgtccatgac tgttttagga cgaataaaaa ttttcttttc tgacggtgtc
     2701 tggaaccata tgccattttc tgtcgtgctg agaagcaaat tctctcgtaa catttgaaag
     2761 ccgccacagt ctgtaaaaat aacgccgtta aagtgcataa agttatgtat tccttttctc
     2821 ttttcgaaca tttctaagcc tggatcctga gaaagaagga acgcatttga aattattgct
     2881 tttgcatttg cctgcttgta atcgtcgacg gagacgaatc ttccgaccgc tttcgttgcc
     2941 actggcataa agaacggcgt ttctatttct ccatgagaag tttttaatat tcccgcacgt
     3001 gcatttttat cttctttgaa gagtgtaaac ataccttcga aagaaaagag tttgtttaaa
     3061 aaggttcctt tattagaatg tgaaattatt taaacaagca tattctctag cagagccatg
     3121 tcatctcata agtttgtttc tattcaagaa gcgattacta aaggaaaagg aatcgtctct
     3181 gtgcatggtt ggtgctatcg ggaacgtgga tccaacgaat tgaaatttat cgttattagg
     3241 gactcgtcaa atattcttca gtgtgttgta gaaaagtcta aagtttcccc tgctgtttgg
     3301 aaagatgcaa actctgtgca tattgaaacg tcattagaaa ttacaggaaa tctcaagaaa
     3361 gatgaccgcg caccaacagg gtatgaaatt actgtaaaag accttcatat tgttgggtcc
     3421 tgcgataatt ttcctattca aaaagatcaa agtattgagt tccttgctga taataggcat
     3481 ttgtggctcc gttccagaaa aatgacggcg atcttaaaaa ttaggagtac cgtctttggt
     3541 gcaattcatc attatttcag agacaatgac ttctatgagt tccaatcacc catatttcaa
     3601 ccaacacagg ccgagggcgg atcgactgtc tttgaagtgc cgtactttgg tgatactgtg
     3661 taccttgcac agacgtggca attacaagca gaggcagcga tgtttgcact ggaaaaaatc
     3721 tatacaattg cgccatcgtt ccgggcagaa aagtctaaaa cttcccgaca cttgacagag
     3781 tactggcatg cagagatgga aatggcgtgg tgcacgttcg aggatttaca aaatcatgca
     3841 gaagcgctcc tgaaatcaat cgtgcagaca gtgctcaaag aaaacaagaa agagctgaat
     3901 gttctaggac gagatgtgaa gaagttagag cctcttgtca agaaaaagtt taaacgtatg
     3961 acatatgatg atgcgctcga tctgttgaaa aataaagcaa acatttctgt tccttggggg
     4021 aaagaccttc gtactgtaga agaagatgcg ctttcagaac tatttgatgt tccaattatt
     4081 gttactcggt atccgaaaga agtgaaagcg ttctatatga aagaagatcc aaaaaattca
     4141 aaagaggttt taggttttga tgtgattgca cctgaacatt atggagaaat tattggcgcg
     4201 tcacagcgtg aagaaaatat tgacaagatc aaagaaaatc ttataaaaca tggagaagac
     4261 cctaaaaatt acgaattcta tctggacaca cggcgctacg gttctgtccc tcatggagga
     4321 tttggacttg gtgtagaacg tatggtgtcg tggatctgtg gattagataa tattaaagat
     4381 gcaataccgt tcccacgaac gatgtttagg tatcgacctt agaaatagaa tttcttattc
     4441 taattatata aatcatgtaa aaaaaagaat aattagagga agtcaatccc caagttctga
     4501 cccatttgct tcgattgatt cggtcgtgcc ttcccttttc caacgatgta cggggaactg
     4561 acgcccgtta taatcgtcat gacgcgaagc cgtcctttca tgtcgccgga tatccgtgca
     4621 ccccagataa cgttagcatc ttcgtccaac gcttctgtga tcatgtttcc gaccttgttg
     4681 acctcgtcta atgtaagatc atcgccacca gcaacatgga tcaatgcgcc tgttgctcct
     4741 tcatagctta cctcaagtaa tgggtttgac aaggcacgct tgactgcttc ttctactcta
     4801 ttctgtgagt ctgattcgcc gataccaatg actgagacgt cgccgtttgc catgatagcc
     4861 tttacatctg catagtctaa gttcaccaat gatggcactg cgataatctc aacaatacct
     4921 ttaatcatgg tagacaccag ttcgtttgca accgcgaacg cttgctgaat aggcaagttt
     4981 cccgcaattt ggacgagacg gttattatca ataacgatga ctgtatcaca tacatcacgc
     5041 agttgctgca gaccgtactc tgctttctca atccgtgccc gttcaatttc aaatggcatc
     5101 gtgactgcgc caataacaat cgctttttct tcctttgcaa tctgtgcaac gatcggagca
     5161 gcgccagttc ctgtcccacc acccatacct gcggtgacaa aaaccatatc tgc
//
LOCUS       DATDZU010000015         2982 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_412730, whole genome shotgun sequence.
ACCESSION   DATDZU010000015 DATDZU010000000
VERSION     DATDZU010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412730"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..118)
                     /locus_tag="VJJ79_00465"
     CDS             complement(<1..118)
                     /locus_tag="VJJ79_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017637695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HLC22230.1"
                     /translation="MAKLTMVEALNLALKQEMKKSKEVLILGEDVGIDGGVFR"
     gene            complement(120..935)
                     /locus_tag="VJJ79_00470"
     CDS             complement(120..935)
                     /locus_tag="VJJ79_00470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22231.1"
                     /translation="MKVRIIPFKRANAAWNLALEEGLFLKAKQDILDGKEVQPIVKMY
                     SFSRPSVILGYKQRIEEINYDFCKNVGVDVTMRTTGGGSVYLGKDDVQYSLLLPTGYS
                     KELLQKINSSIVQALQDVGFNPQLQIKNLHHVIRLEKKSFVFDAQRRFKNLILHHGTT
                     LVNNDDYEHMPEALRATPEEVRDVQTGNVWLRDVEQIREKALVKSFEKNLPEGTSMVR
                     KDFTAEEIKIAKELYKKFYTNEEALKGGKKAFGICYLPSTVYDMELYAEEDSV"
     gene            complement(935..1954)
                     /gene="pdhA"
                     /locus_tag="VJJ79_00475"
     CDS             complement(935..1954)
                     /gene="pdhA"
                     /locus_tag="VJJ79_00475"
                     /inference="COORDINATES: protein motif:HMM:TIGR03181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HLC22232.1"
                     /translation="MIRTLKKFEIQRIEIVNEFGRVDHKLMPKLSAKQIKELYKWMIL
                     TRVFDTKAINLQRTGRLGTYASMLGQEAATIGSAYALRKQDWLFPSYRMNGGMLLRGI
                     DMTKLYSFWGGDERGMKIDNDVNMFPLCIVVGEQMLHATGFAWGLKLKKQNAVVLTDF
                     GDGATSTGDFHEALNFAGVFKAPVIFLCQNNKYAISVPVEKQTAAETLAQKAIAYGVR
                     GVQVDGNDIFAVYKATQEAVQYAAKGIPTLIEADTYRRGDHTTADDAALYRKEKEVKA
                     WEKKDPILRVRLYMEKKKIWSKTDEGNVWTQCQGIVDKAAKAYESLQKPPREDMFKYI
                     CAEGV"
     gene            complement(1951..2229)
                     /locus_tag="VJJ79_00480"
     CDS             complement(1951..2229)
                     /locus_tag="VJJ79_00480"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HLC22233.1"
                     /translation="MAEKKSGRLLNFYGTECPHCHDMFPLIDKLEKELKVKVEKLEVW
                     HNAKNAAVLKKLDTIGCGGVPFLYNEKTKKAICGSVDYATLKKWAQGK"
     gene            2365..>2982
                     /locus_tag="VJJ79_00485"
     CDS             2365..>2982
                     /locus_tag="VJJ79_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22234.1"
                     /translation="MTTTVGIISDIHRRPAKEIEKALAVLQQKGATHLVLNGDIGNCH
                     SALEESLQRITTIVEAAGKSGLETYVQPGSHETITAYQMVLDVLTQTYANITDMVRQP
                     SVDVGDYRLAFLPGSYTLFTGAEYPLQTEEPTGFYIVSAEGVAPFSAENFNRLANEGK
                     DPTRMHFTNINDLKTLVSDPERTVVFCHEPARFNEAKEHGVDFAYF"
BASE COUNT          746 a          736 c          575 g          925 t
ORIGIN      
        1 cacgaaacac gccgccatca atgcctacat cctctccaag tatcaggact tccttgcttt
       61 tcttcatctc ttgcttcagc gcaaggttca gtgcttcgac catcgtgagc tttgccatct
      121 tagacgctgt cctcctctgc atagagttcc atgtcataaa ctgttgaagg taaataacaa
      181 atgccgaacg ctttttttcc gcccttcagc gcttcttcat tagtgtagaa ttttttgtag
      241 agttcttttg caatctttat ttcttctgca gtaaaatctt ttcgtaccat tgacgttcct
      301 tccggaagat ttttctcaaa cgatttcact agtgcttttt ctcttatctg ttcgacgtct
      361 ctcagccaca catttcctgt ctgcacatcg cggacctctt cgggcgttgc acgaagcgct
      421 tcaggcatgt gctcataatc gtcattgttt accaacgttg ttccgtgatg caaaattaaa
      481 ttcttgaacc tacgctgcgc gtcaaagaca aacgattttt tttccaaacg aattacatga
      541 tgcagatttt ttatttgcaa ctgcggattg aagccaacat cttgaagcgc ttgcacaata
      601 ctcgaattaa tcttctgcaa cagttctttc gaatatcctg tgggcaacaa aagagagtac
      661 tgcacatcat cctttcctaa gtacacactg ccaccgcctg tcgtgcgcat agtcacgtca
      721 acgccaacat ttttacaaaa atcgtaattg atctcttcta ttcgctgctt gtagccgagg
      781 ataactgaag gacgggagaa cgagtacatt ttcacgattg gctgcacttc ttttccatcg
      841 agaatatctt gctttgcttt caaaaataac ccttcctcta acgcaaggtt ccacgctgca
      901 tttgcgcgct tgaacggaat gatgcgcact ttcattatac tccctctgcg cagatgtact
      961 tgaacatatc ttcccttggt ggcttctgaa gagattcgta tgcttttgca gctttgtcga
     1021 caataccctg gcactgggtc cacacgtttc cttcatctgt ttttgaccat atctttttct
     1081 tttccatgta cagccgcact cgaaggattg gatctttttt ttcccatgct ttcacttcct
     1141 tctcttttcg gtatagcgct gcatcatctg ctgtcgtatg gtcgccacga cgatacgtgt
     1201 ccgcttcaat caacgtcgga atacctttcg ccgcatactg aactgcttct tgtgttgctt
     1261 tgtacactgc aaaaatatca ttgccgtcaa cttgtacgcc gcgcacacca taggcgattg
     1321 ctttctgtgc caacgtttct gcggccgttt gtttttctac agggacagag attgcatact
     1381 tgttgttctg gcagagaaaa attactgggg ctttgaacac gcctgcaaag tttaatgctt
     1441 catgaaaatc gccagtggac gttgcgccgt cgccaaagtc agtcaataca actgcatttt
     1501 gtttttttaa ctttaatccc catgcaaatc ctgttgcatg caacatttgt tcgccgacga
     1561 caatgcataa cggaaacatg ttcacgtcat tgtcaatttt catcccacgc tcgtctccgc
     1621 cccaaaacga atacaatttt gtcatgtcaa tgccacgaag caacatgccg ccgttcatac
     1681 ggtacgaagg aaaaagccaa tcttgttttc tgagagcgta agctgacccg atggttgctg
     1741 cttcctgccc taacatcgat gcgtacgtcc ctaatcttcc ggtccgctgc aagttaattg
     1801 ctttggtatc aaacactctc gtaagaatca tccatttgta gagttctttg atttgctttg
     1861 cagaaagttt tggcatgagc ttatggtcca ctctgccaaa ttcattcact atttctatac
     1921 gttgaatttc aaatttctta agtgtgcgga tcatttcccc tgcgcccact ttttcagcgt
     1981 ggcgtaatca acagagccgc agattgcttt ctttgttttt tcgttgtaaa ggaaagggac
     2041 gccgccacaa cctatcgtgt cgagcttttt taatactgct gcgttctttg cattgtgcca
     2101 gacttcaagc ttttctacct taactttgag ctctttttcc aatttatcta ttaacggaaa
     2161 catgtcgtgg cagtgggggc actctgttcc atagaaattc aatagtcttc cactcttttt
     2221 ttcagccata agcatcacct cgtttctttt gtagtatata atatttataa gtttaattga
     2281 tatcctctga aaattgcctc ttctctttgc gaaattgcga agaagaaaca tttataaagc
     2341 actttcctga cagaaaaaca aacaatgacc acaactgtcg gcatcatctc ggacattcac
     2401 agacgaccag caaaagagat agagaaagca ctcgcggtct tacaacagaa aggcgcaaca
     2461 catcttgttc tcaacggaga cattggaaac tgccatagtg cattggaaga aagtcttcaa
     2521 agaataacca ctatcgttga agcagcgggg aaaagcggac tggaaacgta cgtgcagcct
     2581 ggcagccatg agacgatcac tgcataccaa atggttcttg acgttctcac gcagacctat
     2641 gcaaacatta ccgatatggt acgacagccg tccgtcgatg tcggtgatta tcggcttgct
     2701 tttcttccgg gatcgtatac tctttttaca ggagcggaat atccgttgca aacagaagaa
     2761 ccaacaggat tctatattgt aagtgctgaa ggcgtagctc ctttctctgc agagaatttt
     2821 aatcgtcttg caaatgaagg aaaagatccg acacgcatgc attttacgaa tatcaacgat
     2881 ctgaaaactc ttgtcagtga tccggaacgc actgttgtct tctgccacga gcctgcacga
     2941 ttcaatgaag cgaaagagca tggcgtcgac tttgcgtact tt
//
LOCUS       DATDZU010000016         8770 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2332904, whole genome shotgun sequence.
ACCESSION   DATDZU010000016 DATDZU010000000
VERSION     DATDZU010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 8770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8770
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2332904"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VJJ79_00490"
     CDS             <1..579
                     /locus_tag="VJJ79_00490"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HLC22235.1"
                     /translation="VARHVLARSEKEAEHAAQTLGFPLVLKIISKKLVHKSDVHGVRL
                     AKTKADLKEEYHDLLKIAARNKLHLEGILIQEYVRGESVLLGLKKDMVFGHVFAFGIG
                     GIYTELLKDMSFRICPITDKDAEEMIEELHMKPLLFGYRGKKKIDIEFLKKIMIAVSK
                     IPVKNPDIQEMDINPFVINDKKGAVVDARIVV"
     gene            616..1806
                     /locus_tag="VJJ79_00495"
     CDS             616..1806
                     /locus_tag="VJJ79_00495"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLC22236.1"
                     /translation="MINLLRKKKVFSRIGELSLISLIIAVGVSLIDTIWAVYLYGFLG
                     SAVKVGLLSALFTMVSLLSFIFLIPFIEKHDKSMLYAWALFFSAICYLIFGFTHSLWV
                     IVLLGVLLSFLMVVRMDSFGLILRDCSQLDELAKNEGILYTAVNLGWLVGPLLAAFIA
                     DRYGIPLVFMLSAFFLFLALLTFKFFRVSGKCRAKKQLDGNFLKNIKDHFKNKDMLKT
                     YILAGSMGTWWSFIYIYVPLYIIENGLGVKWVSFFLFAVVIPLLVLEYPFAKIAETLH
                     YKPLFIAGNILLAIVSISVFFVTNIYAQLFLLICGGIGIAMIEATTEAYFFLIAPKKR
                     LEKYYSVYNTHIDVFPVLAKLLVAGVLSLFAFRYSFLAMALFFVFFTIVAFQLREVSA
                     KTNI"
     gene            1834..2925
                     /gene="truD"
                     /locus_tag="VJJ79_00500"
     CDS             1834..2925
                     /gene="truD"
                     /locus_tag="VJJ79_00500"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: protein motif:HMM:NF013322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0031119 - tRNA pseudouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HLC22237.1"
                     /translation="MIIKQMPEDFVVEEVLELALKERGDYAYFILEKKNWTTLKALRF
                     IAKMLHMNVMRFAVGGQKDRQGITRQYVSAYRVPGRTLEKIRLRDIKIEFVGYGDTPI
                     ALGQLNGNLFHITARDLKNPLHQISFVVNYYDEQRFGGYRPNLHIIGKEVLRGNYEHA
                     VQLFLLYPFPSETQDHVDARTWMEQHWGEWNINKYPRHMIHERMLIGYLAKRPGDFKG
                     ALKALPRQLFTMMTQAYQSYIFNESLARYLKKHFTNYREVPYALGTLVFVDAFVDIDW
                     PLVGYESKLSGDVKEIVEALMKEEGVWYETFKCEIPALSSEGLTRKAMIPVKDFQLSP
                     YKNGVQEVSFFLPKGAYATVVMKALENRI"
     gene            complement(3195..3590)
                     /locus_tag="VJJ79_00505"
     CDS             complement(3195..3590)
                     /locus_tag="VJJ79_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22238.1"
                     /translation="MRREEHDKIIEKGIAVNQKLLDSPTLETITQIEDMLSALRARTG
                     REYVIAFVGQPYGGPKRPMAIPKEDIEAAHHAYGGNLLGISPEIGRCYDLQAARERYQ
                     EGNVAFNPDHYPSRFIDFLRRHFDKEKYV"
     gene            complement(3628..4479)
                     /locus_tag="VJJ79_00510"
     CDS             complement(3628..4479)
                     /locus_tag="VJJ79_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22239.1"
                     /translation="METKDERIKEILFPAIAVDIITGYDVYKEKQKGLNTTFTVNYLH
                     ANLEPTDAHRQELEEKIKEYGIHSILQSIRCQRLDRTAIYRLEYGWHADEYYDAEGNS
                     ITLDQVNELIKHESTVIGLSKQYNLQMGIDDKKTLDLLLNILRKHANLYVINKKTGKP
                     VKYSSDNGLKQNRKHKIHDAWEIPIIGVETAKDIQLEGYRRVNKIFMDGFGDDIYTFV
                     DKKWADTIKHPKKNLVYPTFKEYLEDTNISYSVSHSLVNNILVEWLNEARWKLLENAQ
                     RSLRIFK"
     gene            4671..7283
                     /locus_tag="VJJ79_00515"
     CDS             4671..7283
                     /locus_tag="VJJ79_00515"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016358953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HLC22240.1"
                     /translation="MISHKEKPNTRKEIEALLHPLVKQWFFSRFKEFSLPQLYGVVDV
                     HARKNILVSAPTGSGKTLTAMLAILNELIDSSEKGILEDKVYCVYVNPLKALSNDIEF
                     NLKTPLKEMEQFAGKELGIRIAVRTGDTTPAEKQKMLVHVPHILVCTPETLAILLSSR
                     RFVDHLRNVQWFVMDEVHALAENKRGVHLSLTLERLQRLSPGMCRIGLSATVAPLEAV
                     AEFLVGEGRTCHMIDAQFLKQTDIQVISPVDDLVNSSYETIEKETYTLIDKLIQEHKT
                     TLIFTNTRAATERVVHHLKTRFPENYHAIDEETKEKTALIGAHHGSLSKEHRLHLEND
                     LRDGKLKAVVCSTSLELGLDIGYIDLVICLGSPKSVARLLQRTGRAGHRLHETVKGRI
                     IVTDRDDLVECAVLLKHALEKKIDRIHIPTNCLDVLAQQILGMALEEVWDVDAMYKTI
                     IASFCYKNLSKKDFEEVLDYLAGNFAELEDRHVYARIWWDKDEMKVGKKGRMTRIIYM
                     TNIGTIPDQQGVIVKDNGGNKIGLIDEIFLEKLGKGDIFVLGGNTYQYNYARGMVAQV
                     TAAPGRRPTVPSWYSDRLPLSYDLAKGIQHFRALMDEKLRKKHSRKEILSFIHSYLYV
                     EDVAADALYNYFQDQFDYVGVPHEKKVLIEHYRDEQMKNYVVFHSLYGRRVNDALARA
                     LAYAIMRSQHKDAEIGINDNGFYVSYDKNVHVKKAFELLKAKEFREVLELAIDKSEIT
                     RRRFRHCAGRALMILRTYRGERKRVGRQQVSSNILMCAVRRISEKFFILRETRREILE
                     DLMDIHAALEVMEEIEKKNIKIEEVTTFIPSPFALNLVMQGYSDILRMEDRQKFLQRM
                     HMMVKAKIALKQRM"
     gene            7285..7965
                     /locus_tag="VJJ79_00520"
     CDS             7285..7965
                     /locus_tag="VJJ79_00520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLC22241.1"
                     /translation="MRIHQNIEIRGLYLYLIQEKVLILSDPHIGYEEAMQRRGVLIPN
                     FQFSDLKKNLLPVLGDVTTVVINGDFKHEFGTILYSERKQTKWLLDLFQGKRIIFIQG
                     NHDKILKSLVPKMEITDYVQFGKIVICHGDVIKDIDCDVIIIGHEHVAIGLKEGSRVE
                     KFKCFLKGGYNGKVLIAMPSCNPLTTGTDMLREQRLSPYLQQNLDAFEVYVVSEKIYN
                     FGRVKDLL"
     gene            complement(7957..>8770)
                     /gene="trpS"
                     /locus_tag="VJJ79_00525"
     CDS             complement(7957..>8770)
                     /gene="trpS"
                     /locus_tag="VJJ79_00525"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HLC22242.1"
                     /translation="IAVADVEAYNTRNPNLKELRETAIEEYLLNYIALGLQPKKCVFY
                     FQSSRSKDGKKANAYYRLANMLARHATFNEFQAIYGDISPGKMVSSLLQASDMFHPQL
                     SEFEGGPIPTVVCVGGDQDPHLRLGRDLLQRIKEYKFIQLSSTYHKFLPGLKGGKMSS
                     SDPLTYIALTDSPAEAAMKVKRYAFSGGQSTIEEHRRLGGNPDIDVSYQMLRYGLEPD
                     DKKLKKIHDDYKSGKLLTGELKNILVEKMTYFLLEHQKKREKARKKVEKFSQ"
BASE COUNT         2490 a         1840 c         1873 g         2567 t
ORIGIN      
        1 gtggcacggc acgtgcttgc ccgcagtgaa aaggaagcag aacacgctgc acagacgcta
       61 ggatttcctc tggttcttaa aattatttca aaaaagctag tccataagtc tgatgtgcat
      121 ggcgtgcggt tagcaaaaac aaaggctgac ctgaaggaag aataccatga tctgctcaag
      181 attgctgcac gaaacaagtt gcacctagag gggatcctta tccaagagta cgtgcgcggc
      241 gagtccgttc ttcttggtct gaaaaaagat atggtgttcg ggcatgtttt cgcatttggc
      301 attggcggga tttacacgga actcttgaaa gacatgtcgt tccgaatctg ccccatcact
      361 gataaggacg cggaggagat gattgaggaa ctgcacatga aaccgctgct cttcgggtac
      421 cgcggcaaga aaaagattga cattgaattc ctaaagaaaa ttatgattgc cgtctcaaag
      481 attcccgtaa aaaatcctga tattcaagaa atggacatca acccgttcgt cattaacgat
      541 aaaaaaggcg cggtcgtgga cgcgcgtata gtcgtgtaga aagatattta tagtctcctc
      601 cccttcttgt attcgatgat taatcttctc cggaaaaaga aagtattctc taggattggc
      661 gaactgagct taatctcgct tatcatcgcc gtcggtgtct cgctcattga cactatctgg
      721 gcagtatacc tctatgggtt tctgggaagc gcagtaaaag ttggactctt gtccgcgctc
      781 ttcactatgg tctccctgtt gagctttatc tttcttatcc cattcattga aaagcatgat
      841 aaatcaatgc tctatgcatg ggcacttttc ttcagcgcca tctgttatct tatctttggt
      901 tttacgcaca gcctctgggt cattgttctg ctcggcgtgt tgctcagttt tctcatggtg
      961 gttcgcatgg atagctttgg gcttattctc cgtgactgtt cgcagctgga cgagcttgca
     1021 aaaaatgaag gaatccttta cacggccgtc aaccttggct ggctcgtcgg accgctgctt
     1081 gccgcattta tagcggaccg ttacggaatt cctctcgtgt ttatgctaag cgcatttttt
     1141 cttttccttg cgctcctcac gtttaagttc tttcgtgtga gtggaaaatg ccgtgcgaaa
     1201 aaacaactcg acggtaattt tttaaaaaac attaaggatc atttcaaaaa caaagatatg
     1261 ctcaaaacat acattctggc cggcagcatg ggaacatggt ggtcctttat ctatatctac
     1321 gtgccgctct acatcataga aaacggtcta ggcgtgaagt gggtctcgtt tttccttttc
     1381 gccgtcgtca ttcccttgct ggttcttgag tatccatttg caaagattgc agaaacgttg
     1441 cactacaagc cgctgttcat cgcaggaaac atattgcttg ccattgtctc catctctgtc
     1501 ttctttgtta ccaatattta tgcgcagctg ttccttctta tctgcggtgg aatcgggatt
     1561 gcaatgatcg aggcaacaac agaagcctac tttttcctga tcgcaccaaa gaaacgactt
     1621 gaaaaatatt acagcgtata taacacgcat atcgacgtct tcccggttct tgcaaaactg
     1681 ttagttgccg gagtactctc cctctttgcg ttcaggtact cgttccttgc catggcactt
     1741 ttctttgtct tctttaccat tgttgcattc cagctcaggg aagtttctgc taagacaaac
     1801 atttaaaaag gcgctatttc ttctgcgttt aatatgatca tcaaacaaat gccagaggat
     1861 tttgtcgtcg aagaagtgct cgaacttgcg ctcaaggaac gcggcgatta cgcctacttc
     1921 atcctagaaa aaaagaactg gaccacactg aaagcgctgc ggtttattgc taaaatgctc
     1981 catatgaacg tgatgcggtt cgctgtcgga ggacagaaag accggcaagg aattaccaga
     2041 cagtacgtct ctgcctaccg tgttcccgga agaacgctgg aaaaaatcag actcagggat
     2101 ataaaaatag aatttgtcgg ctacggcgat acgccgatag cgttaggaca attaaatgga
     2161 aatttatttc acatcactgc acgcgaccta aaaaatccgt tgcatcaaat ctcttttgtt
     2221 gtcaactatt atgacgaaca acgattcgga ggatatcgac ctaatttgca tatcattgga
     2281 aaagaagtgc tcagaggaaa ctatgaacat gcagtacaat tatttctcct ctacccattc
     2341 ccgtcagaaa cacaagatca cgtggatgca cggacatgga tggagcagca ttggggcgaa
     2401 tggaacatta acaaatatcc ccgccacatg atccacgaac gcatgcttat tggctacctt
     2461 gcaaaacgtc cgggagattt caaaggtgca ctgaaagcgc ttccccgaca attgttcaca
     2521 atgatgacac aagcatatca aagttatatt tttaatgaat cccttgcacg atatttaaag
     2581 aaacatttta cgaattatcg cgaagtaccg tatgctttag gaacgttggt atttgttgat
     2641 gcattcgtcg acatagactg gccgcttgtt gggtacgaaa gcaaactctc tggcgacgtc
     2701 aaagaaattg tcgaagcgct gatgaaagaa gaaggagtgt ggtacgaaac attcaagtgc
     2761 gagattcctg cgttgtcctc agaagggttg accaggaaag caatgatacc tgttaaagat
     2821 tttcagctga gtccgtacaa aaatggcgtg caagaggttt cctttttctt gccgaagggg
     2881 gcatatgcta ctgtcgtaat gaaagcgttg gaaaatagga tttagtaaga tgtctaagat
     2941 cgtgttctgt ttctttctta aattgcagca tctcatgctt aaactctcgc atctattcac
     3001 gaaactcttt aaaatcctta gccatagtga gcatcgtacg cttgaattct gtaaattctc
     3061 cttcaaagcg tgaaatcttt cacgtttgcg agacgatgat ggtgtgtttc ttttaaagct
     3121 ttcttgcaca tttacaaaat cttttcagaa tttctaaagg atttttcaac aggccaaaag
     3181 ccttatatct ctgattacac atacttctct ttatcgaaat gtctacgcaa gaaatctata
     3241 aagcgggacg gataatgatc cggattaaat gctacatttc cttcttgata cctctctcgt
     3301 gctgcttgca aatcgtaaca tctccctatt tctggtgaga taccgagtaa attgccaccg
     3361 taggcatgat gcgctgcttc tatatcctct ttcggaattg ccataggtcg ttttggtccc
     3421 ccgtatggct ggcccacaaa tgcaataacg tattctcttc ctgttctcgc tctcaatgca
     3481 gaaagcatat cttctatttg tgtaatagtt tccaatgtag gcgagtcaag aagcttttga
     3541 tttactgcaa ttcccttttc gataattttg tcgtgctctt ctcttctcat tttcttactc
     3601 cacttacctt ttgaagatag ctttccacta tttaaatatt cttaatgacc gttgtgcatt
     3661 ctctaatagt ttccatcttg cttcatttag ccattctact aatatgttat taaccaagga
     3721 atgtgaaacg gaataagaaa tattggtatc ctccaaatat tctttgaatg tcggatagac
     3781 aagatttttc tttggatgtt taatggtatc tgcccatttt ttatctacaa aagtatagat
     3841 atcatcgcca aaaccgtcca taaatatttt gttgacacgt cgatagcctt ccaactgaat
     3901 atctttagca gtctcaacac caataatagg tatttcccac gcatcatgta ttttgtgttt
     3961 gcgattctgt tttaatccgt tatccgaaga atatttaaca ggtttccctg ttttcttatt
     4021 gattacatat agatttgcat gttttcttag aatgttcaac aatagatcta acgttttctt
     4081 atcatctata cccatttgca gattgtattg tttagacagt cctataactg tactctcgtg
     4141 ctttatcagt tcattaacct gatctagagt aatggaatta ccttctgcat cataatattc
     4201 gtcggcatgc cacccatact ctaatcgata aattgcagtt ctatcgagcc gttggcaacg
     4261 aattgattgt agaatactat gaatgccata ttcttttatt ttctcttcta attcttgacg
     4321 atgtgcatca gtaggttcaa gattcgcatg taagtaatta acagtgaatg ttgtatttaa
     4381 tcccttttgt ttttctttat agacatcgta tccggtgata atatctactg caattgctgg
     4441 aaaaagaatt tctttgattc tttcgtcttt tgtttccatt tagtgcatct gcgcaagatt
     4501 ctaaacgttt ataaaaattt tcccaacatt tacaaaatct tttcagaatt tctaaaggat
     4561 ttttcaacag gccaaaagcc ttataaatta actatatact ggagcgtcta tatgctggac
     4621 aggacaaatg cccgcagcat ttaatactat tcctgaggtt cttgaaaacc atgatatcac
     4681 acaaggagaa accaaatacg agaaaggaaa ttgaagcgct gctgcatccc cttgtcaagc
     4741 agtggttctt ctcacgattc aaggaattct cgctccccca actctacggc gttgtcgacg
     4801 tgcacgcgag aaaaaatatt cttgtttccg caccgacggg aagcgggaaa accctcacgg
     4861 cgatgctggc aatcctaaac gaactcattg actcctcaga aaaaggaatt cttgaggaca
     4921 aagtgtactg tgtctatgtc aatcctctca aggcactctc taacgatatc gaatttaatc
     4981 tcaaaacgcc attgaaagaa atggaacaat ttgcaggaaa agagttaggc attcgcatcg
     5041 ccgtgcggac cggtgacacg acaccagcag agaaacaaaa aatgttggta cacgtgccgc
     5101 atattctcgt ttgtacgccg gaaacgttag caatattgct ctcctctaga cggttcgttg
     5161 atcacttgcg caacgtgcaa tggtttgtga tggacgaggt acacgcgtta gcagaaaaca
     5221 aacgcggtgt tcatttgtct cttaccttag aacgtctcca aagactttcc ccgggcatgt
     5281 gccgcatcgg gttgtctgca accgttgctc ccttggaagc agtagctgag tttctagttg
     5341 gcgaaggaag aacgtgccat atgattgacg cgcagttctt gaaacagaca gatattcaag
     5401 tgatctcgcc cgtcgacgac ctggtgaaca gttcctatga aaccatagaa aaagaaacgt
     5461 atacgctcat tgacaaactg atccaggaac acaaaacgac gttaattttt accaacacga
     5521 gagctgcaac agagcgcgtc gtgcatcatc taaaaacacg gtttccagaa aattatcatg
     5581 cgatagatga agagacaaaa gaaaaaactg cgctgatcgg tgcgcatcac gggtcgctct
     5641 cgaaagaaca taggctacat ctggagaatg atctacgtga cggaaaactc aaggctgtcg
     5701 tctgttccac aagcttagaa cttggattag atatcgggta tatagacttg gttatttgtc
     5761 tcggctcacc aaagtctgtt gctcgcctat tgcaacgaac agggagagct gggcatcgtt
     5821 tgcacgagac tgtgaaagga cgaataattg tcactgatcg cgacgatctt gtcgagtgcg
     5881 ctgtgcttct caagcatgca ttggagaaaa aaattgaccg gatacatatt ccgacaaact
     5941 gcttggatgt tcttgcgcaa caaattctcg gcatggcact agaagaagta tgggacgttg
     6001 atgcaatgta caaaactatc atcgcctcat tctgctacaa aaacctttcc aagaaagatt
     6061 ttgaagaagt tcttgactac ctggcaggaa actttgccga gcttgaggac cggcacgtgt
     6121 atgcgcggat ttggtgggac aaagatgaaa tgaaagtagg aaaaaaagga cggatgacac
     6181 ggataattta tatgactaac attggaacta ttccagacca gcagggcgtt atcgtgaagg
     6241 ataatggcgg aaacaagatt ggattgattg acgaaatttt ccttgaaaag ttagggaagg
     6301 gtgatatctt tgtcctcggc ggaaacacgt accagtataa ttatgctcga ggtatggttg
     6361 cacaggtaac tgctgcccca ggaagaagac ctactgtgcc gtcgtggtac tctgatcgcc
     6421 tcccactttc ctatgacctt gcaaaaggga tacaacattt ccgtgcacta atggacgaga
     6481 agctgcgaaa aaaacatagc cgaaaagaaa ttcttagttt tattcattca tacctgtacg
     6541 tcgaggatgt agctgcggat gcgttgtaca attatttcca ggaccagttt gattacgtcg
     6601 gcgtaccgca tgaaaaaaag gttctcattg agcattaccg cgatgagcaa atgaaaaatt
     6661 atgttgtatt ccattcattg tatggaagac gtgtcaatga tgcgcttgca cgggcccttg
     6721 cgtacgcgat tatgcgctcg cagcataaag atgcagaaat aggaattaac gataacgggt
     6781 tttatgtatc gtatgacaaa aatgtacacg tgaagaaagc atttgaattg ttgaaagcaa
     6841 aagaattccg cgaggttctt gagttagcca ttgataaatc agaaataaca cgacgaaggt
     6901 ttaggcattg tgccggacgg gcgctgatga ttctcaggac ataccgagga gaacgaaagc
     6961 gcgtcgggcg gcagcaagtg agctcgaata tccttatgtg cgcggtgcga cgaatctcag
     7021 aaaaattctt tatcctcaga gaaacacggc gagaaatatt agaagacttg atggatatac
     7081 atgccgcgct agaagtaatg gaagaaattg agaagaaaaa tattaagatt gaagaagtga
     7141 cgacatttat cccatcacca tttgcgctaa atcttgtgat gcaaggctac tcggatatct
     7201 tgcgcatgga agacaggcag aaatttttgc aacgtatgca tatgatggtg aaggcgaaga
     7261 ttgcactcaa acaaaggatg taagatgcgt atccatcaaa atatcgaaat caggggcctg
     7321 tatttgtatc ttatacaaga aaaagtgctt attctcagcg atccgcacat tggctacgaa
     7381 gaagcgatgc agagacgtgg agtactgatt ccaaattttc aattttctga cctcaaaaaa
     7441 aatctgttac cggtgctggg cgatgtcaca acagtagtga taaacggaga cttcaagcat
     7501 gaatttggca caattcttta tagtgaacgg aaacaaacaa aatggctgct tgatttgttt
     7561 caaggaaaac ggattatttt catccaagga aaccatgaca aaattctgaa gtcccttgtt
     7621 ccaaaaatgg agattactga ttatgtgcaa tttggaaaaa ttgtgatatg tcatggtgat
     7681 gtcatcaaag atattgattg cgacgtgatt atcataggtc atgagcacgt tgccatcgga
     7741 ttaaaagaag ggtcgcgcgt agagaagttc aagtgttttc tcaaaggagg atataatggg
     7801 aaggtgttga ttgcgatgcc atcctgtaac ccgctaacga ctggaactga tatgctccgt
     7861 gagcaacgtt tgtccccgta cctgcaacaa aatttagatg cctttgaggt gtatgttgtt
     7921 tctgagaaaa tatataattt tggacgcgtg aaagatctat tgtgaaaatt tctccacttt
     7981 ctttctcgct ttctccctct tcttctggtg ctcaagcaag aaatatgtca ttttttctac
     8041 aagaatattc ttgagttccc ccgtcaataa ttttcctgat ttatagtcgt catgaatttt
     8101 ctttaacttt ttatcatcag gctccaaccc ataccgtagc atctgatagg aaacatcaat
     8161 gtccggattt cctcctaatc ttctgtgctc ttcaatggtc gactggccac cagagaatgc
     8221 gtaccttttc actttcattg cagcctctgc aggactatcg gttaatgcta tgtacgtcaa
     8281 tggatcagat gacgacattt tcccaccctt caaccctggc aagaatttgt gataggttga
     8341 actaagttgg ataaatttat actcttttat tctttgcaat aaatctcgtc ctaagcgtaa
     8401 atgtggatct tgatcgccac caacgcaaac gactgttgga atcggaccac cttcgaactc
     8461 tgataactgc ggatgaaaca tgtctgaagc ctgtaacagt gatgagacca tttttcctgg
     8521 agagatatcg ccgtagattg cttgaaattc gttgaatgtt gcgtgccgcg cgagcatgtt
     8581 tgccagccgg taatatgcgt ttgctttttt tccgtctttc gaacgcgagg attgaaaata
     8641 aaagacgcat tttttaggtt gcagacccag cgcgatgtag ttcaagaggt attcttcaat
     8701 agcggtctcg cgaagttctt ttaggtttgg atttcgagta ttgtatgctt ccacatctgc
     8761 aactgcaatg
//
LOCUS       DATDZU010000017         4860 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1497062, whole genome shotgun sequence.
ACCESSION   DATDZU010000017 DATDZU010000000
VERSION     DATDZU010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497062"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="VJJ79_00530"
     CDS             <1..503
                     /locus_tag="VJJ79_00530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22243.1"
                     /translation="NARKIKIASNMTIHNAGIIQDIDSITISVIVYALSKICNKPRLY
                     ENKNFLTFKEAMLQDLIDAQFFLKKKDINGYRTTIKKSFQETARFEKRFGTYIREAIE
                     QSKIKRGGRLYEHGLSVGRTAQLLGISEWEMMGYLGDTKISDIHPEGGVDIDHRLTIT
                     RKVFSL"
     gene            500..1189
                     /locus_tag="VJJ79_00535"
     CDS             500..1189
                     /locus_tag="VJJ79_00535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22244.1"
                     /translation="MKAIVFDSSTIISIAMNNLLWTLGPLRKQFKGEFYIPLSVKEEV
                     IDAALRTKRFKLEGLQIQNEIVEGNLTLYTEDLIKEIHEIESIANSTFACNGNDIHII
                     DKGEIAALALCQKIGAEVLFIDERTTRLLIEAPNMLASILHNKMHKQVHINKENLSFI
                     HKRMKGIHILRSVEFGVAAYELGLLDKYMPQKTQETKRQLLDAVLWGMKLRGCAVSDF
                     EIQQIMEKEIK"
     gene            1322..2605
                     /locus_tag="VJJ79_00540"
     CDS             1322..2605
                     /locus_tag="VJJ79_00540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22245.1"
                     /translation="MKNIKRFSMTVFLLLGLLGLTAMVSAASDFYDVTQVKVEGITVS
                     SDDQVEVEVGETVDIDVFVEGNASVDGVRVKAWLGGYEHGDVEAVSSSFDVKPGVSYK
                     KSLSLELPADLDVEDGNTYTLYVEVYDSEDSEQETYTLFVERPRHAVDVLDVVHDATV
                     NAGDDLGVEVRLKNIGQAKEEDIKVKVTLADAEDATYVDELAAFEDDSEDAESSGSVE
                     FSLPVSESTASGEYELTVIVTYDDGHETVEQVSTVTVEGTEAPEKENTEEGADVTLSL
                     SARSLSGEAGQASSVQLTFANTGTAAATYTVSVAGVDQWATTDVTPSVVVVESKEVSD
                     VTVTVTPDNDANGDYEFTVNVLDADGALVKEVTLNMTVDEKSGLLSDSGTAIKVGFVV
                     LLVVIIIIGLVVAFRKLGDGDDDEPLEPKDGKTYY"
     gene            complement(2627..3334)
                     /locus_tag="VJJ79_00545"
     CDS             complement(2627..3334)
                     /locus_tag="VJJ79_00545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22246.1"
                     /translation="MGCNGSDCEKGYNEKNGECVAEPQEWRGTGYTFDEIVDISSSLL
                     MTLDADEMCAEASNVSVNGAPSKSDECVRFYTALQENLPSFAEKTTDVNVMSLPLQVY
                     SLGEFVGYYTGIAFRIEFTDTNTGAYLETNVYRIEKGCRNPVDFFYKSVVCYSSISVA
                     DLPIMEDVSMGCQEYMPAIVFAASLSECPELNSVSLSLYDSKGIVYQDPAVTDPVVLT
                     IYTESAETLEELLESVE"
     gene            3478..3789
                     /locus_tag="VJJ79_00550"
     CDS             3478..3789
                     /locus_tag="VJJ79_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22247.1"
                     /translation="MSQYQTIEKEKYNLETLTDKEQLFFDIMYKDSLRNLSRPQFQQQ
                     WGKRAWELAEEYQVTNHGKTKDAPIYKIYDDIADRIGVHTNDPLAPKVQGILSDPIIA
                     D"
     gene            complement(3827..4798)
                     /gene="kae1"
                     /locus_tag="VJJ79_00555"
     CDS             complement(3827..4798)
                     /gene="kae1"
                     /locus_tag="VJJ79_00555"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061711 - N(6)-L-threonylcarbamoyladenine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex N(6)-L-threonylcarbamoyladenine
                     synthase Kae1"
                     /protein_id="HLC22248.1"
                     /translation="MIVLGIESTAHTFGVGVFDGTKQKVLANVRDTFTTSVGGLIPKD
                     VAMHHKQVQSDIFEKALHDARVSIENIGLIAYSSSPGLAPSLIVGRDFAVDLAKKYNK
                     KLLGVNHIMAHLEIGLFTTGAKDPIFLFCSGANTQVIAHDGGRYRVFGEALSIALGNA
                     LDKFARSIGLGFPGGPKIEELAKKGKYVELPYKVKGMDVDFSGIVTRAMDLYKKGVAK
                     EDLCFSLQETCFAMLIEVAERAVAHCEKNEVLLIGGVAANKRFSEMLTLMSHARGVKA
                     YTVPMEYAGDQGAMIAYQGWLERDREQIIFDIDPRLRVDEIETFWKK"
BASE COUNT         1547 a         1089 c         1022 g         1202 t
ORIGIN      
        1 aaaatgcacg aaaaataaag attgccagta acatgactat ccacaacgca ggcattatcc
       61 aggacataga ttctattact atcagtgtca tcgtctacgc actctcaaaa atttgcaaca
      121 agcctcggct ctatgaaaat aaaaattttt taacgttcaa ggaagcaatg cttcaagact
      181 tgatagacgc acaatttttc ctcaaaaaaa aagatatcaa tggctacagg acaacaatta
      241 aaaagtcgtt tcaagaaact gcacgcttcg aaaaacgttt tggtacgtac attcgcgaag
      301 caattgagca gtcaaagatt aaaaggggcg ggcgattgta cgagcacggt ctttccgtcg
      361 gcagaacagc acagctacta ggcatttctg agtgggaaat gatgggctat ttgggcgaca
      421 caaagatcag tgacattcac cctgaaggcg gcgttgatat tgaccatagg ctgacgataa
      481 cacggaaggt tttttcatta tgaaagcaat agtgtttgac tccagcacga ttatcagtat
      541 cgcaatgaac aaccttctct ggaccctggg cccgttacgt aaacagttca aaggagaatt
      601 ttacattcct ctctctgtaa aagaagaagt gattgacgcg gcgctaagaa caaaacgttt
      661 caagcttgaa ggtctccaga tacagaacga aattgtagaa ggaaacctta cgctgtacac
      721 agaggaccta atcaaagaaa tccatgaaat agaatcaatt gcaaacagca catttgcatg
      781 caacggaaac gatatccata taattgacaa gggcgaaatt gccgctctgg ccctgtgcca
      841 aaagattggc gcagaggtac tcttcattga cgaacgaacc acgcggttac tgattgaagc
      901 acccaacatg cttgcaagca ttctccacaa caaaatgcat aaacaggtac atatcaacaa
      961 agaaaacctt agttttattc ataagagaat gaaaggcatc catatcctcc gttctgttga
     1021 gtttggcgtg gccgcgtacg aactcgggct tttagacaag tatatgccac aaaaaacaca
     1081 agaaacaaaa cgccagctcc tagacgcagt actctggggc atgaagctcc gtggctgtgc
     1141 agtctcagac tttgaaatcc agcagatcat ggaaaaagaa ataaaataat ccctaatagg
     1201 gagtaaaaaa caaaaatatt atatccctac aagcacggga ctacttctat acgcaaccag
     1261 cataagactt ataaaacatc atagggagcg atggcatatc aacctttggg gggaacctta
     1321 catgaagaat atcaaacgat tcagcatgac agtattcctt ttgcttggtc ttctaggcct
     1381 aacagcaatg gtgagtgctg ccagtgattt ctatgacgtt actcaagtta aagtagaggg
     1441 aataacggta tcaagtgatg atcaagtcga agttgaagta ggagaaacag tcgacatcga
     1501 cgtctttgtc gaaggaaatg cttcagtaga cggcgtccgg gttaaagcat ggctcggcgg
     1561 gtacgaacac ggggacgtgg aagcagtatc atcttccttt gacgtgaaac cgggcgtgag
     1621 ctacaaaaag tctctcagcc tagagcttcc cgcagatctt gacgtagaag atggaaatac
     1681 atacaccttg tacgtcgaag tctatgatag cgaagacagc gaacaagaaa catatacatt
     1741 gtttgtcgaa cggccacgac acgcagtcga cgtccttgac gtggtgcatg atgcaaccgt
     1801 gaacgcaggc gacgatctgg gcgttgaagt gcggctcaag aatatcggac aagcaaaaga
     1861 agaagacatt aaggtcaaag taacgcttgc tgatgcagaa gatgccacat acgtggacga
     1921 gctcgcagca tttgaagatg atagtgaaga cgcggaaagt tctggatcgg tagagtttag
     1981 tcttcctgtc agcgaaagta ctgcctctgg cgagtacgaa ctcacggtaa tagtcaccta
     2041 cgatgacggc cacgaaacag tggaacaagt ctcaacagtt actgttgaag gaacagaagc
     2101 acctgaaaaa gagaacacag aagaaggtgc tgatgtgaca ttaagcctta gtgcacgttc
     2161 gttgtctgga gaagcagggc aagcatctag tgttcaatta acatttgcaa acacagggac
     2221 agcagcagca acgtacacag taagcgtcgc tggcgttgac caatgggcaa ccacagacgt
     2281 gacgccaagt gttgttgttg tcgagagcaa agaggttagt gatgtcactg tgacagttac
     2341 gccagacaac gacgcaaacg gcgactacga gtttacggtc aacgtccttg atgcagacgg
     2401 ggcattggtg aaagaagtaa cactaaacat gactgttgat gaaaagtccg ggttgcttag
     2461 tgactctgga actgcaataa aggttggctt tgtcgtcttg ctcgtggtaa ttatcatcat
     2521 cggacttgtc gtcgcgttta gaaagcttgg tgacggcgat gatgatgaac ctttagaacc
     2581 aaaagatgga aagacctact actaggcctt cttatttttt tcttttttat tcaacacttt
     2641 ctaaaagctc ttcgagagtt tctgcagatt ctgtgtaaat ggtgagaaca acaggatctg
     2701 taacagcagg atcttgatag actatcccct tggaatcata aagactaagg cttacgctat
     2761 ttaactctgg acactcactc aagcttgcag caaagacaat cgcaggcata tattcttggc
     2821 aacccatact cacatcttcc atgataggga gatctgcgac tgatatagaa gaataacaaa
     2881 caacactttt gtagaaaaaa tcaacaggat tcctgcaccc tttttctatg cggtatacgt
     2941 tcgtctcgag atacgcacca gtattcgtat cggtaaactc aatcctaaat gctatcccag
     3001 tataatagcc aacaaactct cccagggagt acacttgaag agggaggctc ataacgttca
     3061 cgtctgttgt tttttcagca aacgaaggaa gattttcttg caatgcagta tagaatctca
     3121 cacattcatc agactttgaa ggggcaccat tgacactgac gttggacgct tcggcacaca
     3181 tctcatctgc atcaagcgtc atgagcaaag agctgcttat atcgacaatt tcatcaaacg
     3241 tatagcctgt gccacgccac tcttgaggtt ctgcaacaca ctcaccattc ttttcattgt
     3301 atcctttttc acaatcagat ccattacaac ccacagcaaa aataagagaa catagtccag
     3361 taactagtga tgatcggaat gcgatacagt aagaaaatgg agtgaacctt aaaagctttt
     3421 ccctaaacga aggataaaca aagtttataa agagtttatt attttattaa aaataaaatg
     3481 tcacaatatc aaaccatcga aaaagaaaaa tacaatctgg aaacattgac agataaagaa
     3541 cagcttttct ttgatatcat gtacaaagac tccttacgaa atctctcacg gccacagttt
     3601 caacagcaat ggggaaaacg agcatgggag cttgcagaag agtatcaagt gacgaaccac
     3661 ggcaaaacaa aagacgcgcc tatttacaaa atctacgacg acattgccga tcgcattggt
     3721 gttcatacaa acgacccgct cgcgccgaaa gtgcaaggta ttttgtccga cccgattatt
     3781 gctgattaat ctaagcctac acaaatttcc ataaagtata actgttctat ttcttccaaa
     3841 acgtttcgat ctcgtccaca cgcagtcgcg gatcaatatc aaatattatt tgttctcggt
     3901 ctcgttcaag ccatccttgg tatgcaatca ttgccccttg atcaccagca tattccatgg
     3961 ggaccgtata ggcttttaca ccccgcgcat gactcatcaa agttaacatt tcggagaacc
     4021 gtttgtttgc agcaacgcct ccaataagca gcacttcgtt tttctcacag tgcgctactg
     4081 cccgttctgc aacttcaatc agcatcgcaa agcacgtttc ctgaagagag aagcaaagat
     4141 cttctttggc aacgcccttc ttgtataaat ccatcgctct cgtgacaatg ccagagaaat
     4201 ctacatccat tcctttgact ttgtacggca actcaacata ttttcctttt tttgcaagtt
     4261 cctcaatttt cggtccgcca ggaaacccga gaccgatgct tcgcgcaaac ttatccagtg
     4321 catttccaag tgcaatagaa agtgcttcgc caaacacacg gtaccgtccg ccgtcatgtg
     4381 caatcacttg cgtgttcgcc ccggaacaga acaaaaaaat aggatccttt gcaccagtag
     4441 taaaaagccc aatttctaaa tgcgccatga tatgattaac acccaaaagt tttttattat
     4501 atttttttgc aaggtcaacg gcaaagtctc tgcctacgat aagagaagga gcaagaccag
     4561 gactagacga ataggcaatc aagcctatat tctcaatcga cactcgagca tcatgcaacg
     4621 ctttctcaaa tatgtcagac tgcacttgtt tgtgatgcat tgcgacatcc tttggaatga
     4681 gaccgccaac actcgtcgta aacgtatctc gtacattcgc taaaactttc tgctttgttc
     4741 cgtcgaagac accaacgcca aaggtatgcg cagtggattc gattcctagg acaatcatag
     4801 tacatttcga tggagaccaa agatttaaaa acctatccac tacgtgacag caacatttcc
//
LOCUS       DATDZU010000018         5080 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1825432, whole genome shotgun sequence.
ACCESSION   DATDZU010000018 DATDZU010000000
VERSION     DATDZU010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5080
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825432"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VJJ79_00560"
     CDS             <1..748
                     /locus_tag="VJJ79_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22249.1"
                     /translation="YDRLLVARDIDREGGRQRDFTPYRAALSFEKEDSFSPSFALTCN
                     LLAAAWRQNDEEAVRSFLLQYKDNGNGDGWHAQNTVIDWRRGDIVHYPDARDFAEDKL
                     VNEQRKRRALRFTKEGLGDCLLEEGLKDSHMRRYVRQLTGLEDPSILVDIGNYFHKPA
                     RVWVSGSKDAVRAAWLGCGDNGFNLDGDYLNFSDAARRVRAEGAAREARQKISDGDSV
                     GIEEVLKAARLYVSKHSWDGFEQDIRKLKE"
     gene            complement(755..2242)
                     /locus_tag="VJJ79_00565"
     CDS             complement(755..2242)
                     /locus_tag="VJJ79_00565"
                     /inference="COORDINATES: protein motif:HMM:NF015428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22250.1"
                     /translation="MALSTKEKQKVKRFVRSLEKIRGRHTELVSVYIPAGYDLNKIIQ
                     HLAQEQGTAANIKDKTTQTHVIDSLERMIRHLRLFKRTPENGLALFSGNISDREGKTD
                     IQVLSIEPPQPLKIRMYRCDQTFVLEPLREIMDVRETYGLIVLDKREANLGLLRGTAI
                     QELTSMTSAVPGKTKAGGQCLHPETVVHLADGQLLQLEEINIGDEVLSYDFTKQTFVP
                     SKVLETWEVKKEKVYTITTEDTIVASGDHLFFLADGTTKAAEELQVGMQLLNGNGQPA
                     SITYIVIEEKEITLIDIKVENENFVAENLVVHNSAQRYARIREEATKEFFNRIGEAAN
                     KAFLEMKEMKGILVGGPGMTKNQFLDRGFLNEQLRRKVISVQDLGYTGDFGLRELVDK
                     SRDVLAKEIIIEERVIMEKFFKLLATEREKVAYGEADVDRAMLMGAIDTLLISEALPD
                     EKVEAYEDKAEETGAKVMIISTDTGEGEQLRDLGGVAAILRFALV"
     gene            complement(2283..4670)
                     /locus_tag="VJJ79_00570"
     CDS             complement(2283..4670)
                     /locus_tag="VJJ79_00570"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF009687.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HLC22251.1"
                     /translation="MRELPKTYNSHEAENKWLAYWEKEKIYHFNSKSKKKIFSVDTPP
                     PTVSGKMHIGHSFSYSQEDFIVRYKRMRRHEVFFPFGTDDNGLATDRLIEKIKGVKSA
                     AMDRKEYVQLCLKTLEEIRPDFVQDWKHLGISCDYSLFYSTINEHCQRVSQQSFIDLY
                     KKGLEYVKEAPTLWCPECHMAIAQVELEDKQLKSYFNDIIFTVNGDKLIIATTRPELL
                     PACVAIFYHPDDKRYTKYKGKKATVPLFNFNVPILPDKRADPTKGTGIVMCCTFGDQT
                     DMEWYFAHNLPLKTAISPFGKMTELAGTYQGLSIKEARKAIIDDLKKEGLLVSQKEIM
                     HAVNVHERCGTEIEILHSRQWFIKYLDKKNMMVDAGNTLHWHPEHMKNRYDNWVKGLQ
                     WDWCISRQRHYGVPIPVWYCKKCEEVLLPDEKQLPVDPLRDTPPHACPKCSSKEYVPE
                     KDVLDTWATSSLTPQIAAQLVPEAYDKIYPMSFRQNSHDIITFWLFNTLVKSQLHDKK
                     NPWNEVMITGWVLDQHGKKMSKSKNNVIDPREVWGKYCVDALRFAAAGTKLGEDYPFQ
                     EKDVVTGQKTVTKLWNASLFSLMHLKDYDEKNKIKKLEAFDAWVLSKLQKVIRACTES
                     LESYEYSKAKAETDKFFWQTLCDQYLEIVKDRLYNSDKRGKDARASGQYALHVSLVST
                     IKLFAPFLPYITEEIYHLSFADQDMQKSVHQSSWPDSHEKLIDEKIEQVGDALVEVIS
                     LVRKAKSEKNISLKEPVKELVIALNEDDVRPFLEDLKAVTKAERVTFGSTTAVIL"
     gene            4781..>5080
                     /locus_tag="VJJ79_00575"
     CDS             4781..>5080
                     /locus_tag="VJJ79_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HLC22252.1"
                     /translation="MATVTPWEVEGAIDYDKLMKEFGLQPLEKLPKVFQDSLLFRRNL
                     IFAHRDFNRIIDAIKKKQPFVMMTGLMPSGKFHFGHKMVVDQIIFYQSLGAKVYIA"
BASE COUNT         1285 a         1129 c         1113 g         1553 t
ORIGIN      
        1 gtatgatcgt ttgctggtgg cgagggacat tgatcgagaa ggtggaaggc aaagagattt
       61 cacgccgtat agagctgcgt tgtcctttga gaaagaagat tcattcagtc caagcttcgc
      121 attgacatgc aaccttcttg ctgccgcgtg gagacagaat gacgaagagg cagtacgttc
      181 tttcttgctg caatacaaag acaatggaaa tggggatggg tggcatgcac agaacacagt
      241 tattgattgg cggagaggag acattgttca ttatccagat gcccgagatt ttgcagaaga
      301 caagctagtg aacgagcaaa gaaagagaag agcattgcgg ttcacgaagg aaggacttgg
      361 agattgtttg ttagaagaag ggctcaaaga ttctcacatg agacgttatg ttcgccagct
      421 taccggtctt gaagatccat ctattctcgt tgacattgga aactattttc ataaaccagc
      481 aagagtatgg gtttcaggta gcaaagatgc agtgcgagcg gcgtggctgg gttgcggcga
      541 caatggcttc aaccttgatg gcgactatct taacttcagt gacgccgctc gtcgggtacg
      601 cgccgaaggc gccgcgcgcg aagcgcgcca aaaaatttca gatggggact ctgtaggaat
      661 agaagaagtc ttaaaagcag cgcgtcttta tgtttctaag cacagttggg atggctttga
      721 gcaagacatt agaaagctaa aggaataaat ttttttagac cagtgcaaac cgtaatattg
      781 cagcaacacc acccaggtcc cgtaattgtt ctccttcgcc tgtgtcagtg ctgatgatca
      841 taacttttgc acccgtctct tctgctttgt cttcataggc ttcaactttt tcatcaggca
      901 atgcttcaga aataagaagt gtatcgatag cgcccatcaa cattgctctg tcaacatccg
      961 cttccccata agcaactttt tctcgttcgg ttgcaagaag cttaaagaat ttttccataa
     1021 tgacccgttc ttcgataatg atttcctttg cgagcacgtc cctgcttttg tcaactaatt
     1081 cccgcagccc aaaatctcca gtatagccta agtcttggac agagataacc tttcgtcgca
     1141 gctgttcgtt caagaacccg cgatctagga attggttctt cgtcatccct ggaccgccaa
     1201 caaggatacc tttcatttct ttcatttcca ggaacgcttt gtttgctgct tccccaattc
     1261 gattaaagaa ctctttcgtt gcttcttccc gtatccgtgc gtaccgttgc gcagagttat
     1321 gcacgacaag gttttcagcg acaaaatttt cattttcgac tttgatatca attaacgtaa
     1381 tttctttttc ttcgatgaca atataagtga tacttgccgg ttgcccgttg ccgttcaaga
     1441 gctgcatgcc tacctgtaac tcttccgcag ctttagtagt accatccgca agaaaaaaaa
     1501 ggtgatctcc agacgcaaca atagtgtctt ctgtcgtaat agtataaact ttttcttttt
     1561 tcacttccca tgtctcaagg acttttgaag gaacaaatgt ctgttttgta aaatcatagc
     1621 tcaggacttc gtcacctatg ttaatttctt ccagctgaag gagttgcccg tcagcaaggt
     1681 gcacgactgt ttctgggtgc aggcactgtc cccctgcttt agtttttcct ggaacagcag
     1741 aggtcatgga cgtcagttct tgaattgccg tgcctctcag taaccctaag tttgcttccc
     1801 gtttatcgag gacaatcagt ccgtacgttt ctctcacatc cataatttct ctcaggggct
     1861 caaggacaaa cgtttggtcg cagcggtaca tccgaatctt tagcggctgc ggtggttcaa
     1921 tgctaaggac ttgaatatct gtttttccct cacggtcgga tatattccca gaaaatagtg
     1981 caagcccgtt ttcaggtgtg cgtttgaaca agcgcaggtg ccggatcatg cgttcaagag
     2041 aatcaatcac gtgcgtttgt gtagttttat ctttgatgtt tgctgctgtt ccctgctcct
     2101 gtgcaaggtg ctggataatt ttgttcaggt catacccagc aggaatatac acagaaacga
     2161 gctccgtgtg ccgccctcga attttctcaa ggctgcggac aaaccgcttc actttttgtt
     2221 tttctttggt gcttaacgcc atgtgctttt cctctgcatc tgaagatata taagccttat
     2281 tgtcaaagta tgactgcagt tgtgctgccg aaggtaacac gttccgcttt ggtgaccgct
     2341 ttcaagtcct ctaagaacgg acgaacgtca tcttcattga gggcaataac aagttctttg
     2401 acaggctctt ttagagaaat atttttttca gacttcgctt ttcgtacgag agaaataacc
     2461 tcgacaagtg catctcccac ttgttcaatc ttttcatcaa taagcttttc atgagaatcc
     2521 ggccaagagc tttggtgcac agacttttgc atatcctggt ctgcaaatga aagatgataa
     2581 atttcttctg taatgtacgg caggaatggt gcaaaaagtt ttatggtaga tacaaggctt
     2641 acgtgaagcg cgtactgccc ggatgcccgt gcatcttttc cgcgtttgtc agaattatac
     2701 aatctatcct tgacaatttc aaggtactgg tcacaaagcg tttgccagaa aaatttatcc
     2761 gtttctgctt tcgcttttga atactcgtag ctctctaaac tttctgtgca cgcgcgaata
     2821 actttttgta acttggagag cacccatgcg tcaaatgctt ctaacttttt tattttattc
     2881 ttttcatcat aatccttgag gtgcatgagg ctaaagagcg acgcgttcca aagttttgtc
     2941 acagttttct gtccagtgac cacgtccttt tcttggaacg gataatcttc gccaagcttt
     3001 gttcctgcag cagcaaaccg caacgcatcg acgcagtatt tgccccagac ttctcgtggg
     3061 tcaattacat tgtttttgga ctttgacatt ttctttccat gctgatccaa cacccagccg
     3121 gtaatcatta cttcattcca cggattcttc ttgtcgtgca actgtgattt cacgagagta
     3181 ttaaagagcc agaaagtaat aatgtcgtgg ctgttctgcc ggaagctcat gggataaatt
     3241 ttgtcgtacg cttctgggac aagttgtgcg gcaatctgtg gtgtcaggga cgatgttgcc
     3301 catgtatcaa ggacatcttt ctccggcaca tattcttttg agctacattt cggacacgca
     3361 tgtggcggtg tatcacgcaa cgggtcgacg ggcaactgtt tttcgtcggg caacaggacc
     3421 tcttcacatt ttttgcagta ccagacaggg atcggaacgc cgtagtgccg ctgtcgcgag
     3481 atgcaccagt cccattgcaa acccttgacc caattatcat atcggttctt catgtgttca
     3541 gggtgccagt gcagcgtatt ccccgcatcc accatcatgt tttttttatc gaggtatttg
     3601 ataaaccatt gtcgcgagtg cagaatttca atctcggtgc cgcaacgttc gtgcacgttc
     3661 accgcgtgca taatttcttt ctgtgagaca agcaaacctt ctttcttcaa gtcgtctatg
     3721 atggcttttc gtgcttcctt gatacttagt ccttgatacg ttcccgcaag ctcagtcatt
     3781 tttccaaagg gagaaattgc ggttttcaac ggaaggttat gtgcaaaata ccattccatg
     3841 tcagtctgat ctccaaaagt acagcacatg acaatcccag ttcctttcgt cggatccgcg
     3901 cgtttgtcag gaaggatggg gacattgaaa ttaaagagtg gcacggtagc tttctttcct
     3961 ttgtatttcg tgtatcgttt atcgtctggg tgatagaaga tggcaacaca tgcaggcaac
     4021 aattctgggc gtgtcgttgc aataatcaat ttgtctccgt tcacagtaaa aatgatatca
     4081 ttaaagtacg atttaagttg cttgtcttct agctcgacct gtgcgattgc catgtgacat
     4141 tccggacacc agagcgtcgg tgcttctttt acatactcga gacctttttt gtacaagtca
     4201 atgaacgact gttgcgagac gcgttggcaa tgttcgttga tggtagaata aaataaggaa
     4261 taatcacagg agatgcctag atgtttccag tcttgcacaa agtcagggcg aatttcttcc
     4321 agcgttttca agcataattg cacgtactct tttctgtcca tcgctgcaga cttcacgcct
     4381 ttaatttttt caatgagacg atcagttgct aagccgttgt catccgtacc aaatggaaaa
     4441 aacacttcgt gcctgcgcat acgtttgtaa cgcacaataa aatcttcttg agaatatgaa
     4501 aacgaatgtc ctatatgcat cttccctgaa acggtcggtg gcggtgtgtc aacagagaat
     4561 atctttttct tggatttaga attaaaatga taaatttttt ctttctccca gtaggctaac
     4621 catttatttt ctgcctcatg agaattgtat gttttgggaa gctcccgcat ggttgaaggt
     4681 taaacaggga gatatttaaa aacttttctt tagcaggttt tgctgaaatt atgatcctga
     4741 accaaaacgt ttaataagaa ttcttccctt tctttagtgc atggcaacag taacgccgtg
     4801 ggaagttgaa ggggcgattg actatgacaa actaatgaaa gagtttggtc tccaaccatt
     4861 agaaaaactt ccaaaagtat tccaagattc tctcttgttc agaagaaacc taatctttgc
     4921 gcaccgtgac tttaacagaa ttattgacgc gattaaaaaa aagcaaccgt ttgttatgat
     4981 gactggtcta atgccttctg gtaagtttca tttcggtcac aagatggttg tggaccaaat
     5041 tattttttac caatcgctgg gagcaaaggt gtacattgca
//
LOCUS       DATDZU010000019         3092 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1325399, whole genome shotgun sequence.
ACCESSION   DATDZU010000019 DATDZU010000000
VERSION     DATDZU010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1325399"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VJJ79_00580"
     CDS             <1..338
                     /locus_tag="VJJ79_00580"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HLC22253.1"
                     /translation="AIADALSDAMGMHITQECRECSTRDVWEASAATFASKFIFALTF
                     IIPIVLFPLNIAVLVSIIWGLLLIGFFTGYLNNKKKRMQEITLHLLMAGIVVVATYCV
                     GQWVARAFL"
     gene            349..888
                     /locus_tag="VJJ79_00585"
     CDS             349..888
                     /locus_tag="VJJ79_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22254.1"
                     /translation="MKISLGIGAVILGESCYKPMETIHPVSEAPAEITGNIERAQEEI
                     EPQYSLLRTIVSTQWLEKSHDISWNSPYAVVDIYSKQNGDNKYRLEYRHGSSPFVKSQ
                     TSLNERCDLLIFRIQGEEEIQEKYFMDVKCNGDVERADLYCFLYSDPKDTKDFSAEGK
                     KIVADQYEEALETFLLVEE"
     gene            complement(896..2962)
                     /gene="topA"
                     /locus_tag="VJJ79_00590"
     CDS             complement(896..2962)
                     /gene="topA"
                     /locus_tag="VJJ79_00590"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HLC22255.1"
                     /translation="MTSLIISEKPSTAQKIAEALADKMPEKHVYLKRIPYYELTHNGE
                     KIIVACAVGHLYSVAEKDKKGWSYPVFSMEWKPAFDVAKGSAFTKPYLQLIKKLSSEA
                     DKFIVACDYDIEGEVIGFNIIRFACGKKDALRMKFSTTTKEDLRKSYDHIMKHMDHGQ
                     AEAGITRHELDWLFGINLSRALTLSIKHATGMFKILSSGRVQGPALKLLTEREKEIQV
                     FVSVPYWELELVCQEISAFHKHGKFPERKSPEAIVEKCQGKPAIVEKVERKQFQQAPP
                     HPFDLTALQLEAYRVLHIQPKETLELAQNLYINSYISYPRTSSNQLSPVIGYRKVLEK
                     LSHQDSYTTLCGNLLARKELQPYNGKKKDAAHPAIYPTGEAPKSLTEREVKLYDLIVR
                     RFLATFADPAVRETAQITIDIGLEKFTTSGTHTIKENWHAFYKPYVKLEEEDVHVEEK
                     QTLQVKQLNIHDKETQPPKRYTPASVIKELEKKNLGTKATRSDIIEGLFDRNYIRGRD
                     SLEVTGLGMATIEVLIKYCPEILDEQLTRDFEDEMEKIQQGQRSESDALKHAEVFLTD
                     VLGKFKEHEKEIGSALSGSYKETMREEVFVMKCECSGDLQIRYTPKFKSYFIACSKYP
                     ECKKSFSLPRGYLAKTSGKMCDACTFPEVLLISRGKRPWAFCINQNCPKKAEYRARME
                     EKKTQI"
BASE COUNT          853 a          649 c          646 g          944 t
ORIGIN      
        1 tcgcgattgc ggacgcgctc tctgatgcga tgggcatgca tattactcaa gaatgcaggg
       61 aatgttcaac gcgagatgtc tgggaagcga gcgccgcaac atttgcatca aaatttatct
      121 ttgcattaac attcatcatc cccattgtac tctttccgct gaatattgca gttcttgtca
      181 gcatcatctg gggtcttctc ctgataggct tctttacagg ctatctaaat aacaaaaaga
      241 aaaggatgca agagatcacg ttgcatttgc tcatggctgg tatcgttgtg gtagcaacgt
      301 attgcgtagg gcaatgggtt gcacgggcat ttttgtaaag aaaatatgat gaaaatttcg
      361 ctgggaatcg gtgcagtaat tctaggagag agttgttata agcctatgga aacaatacat
      421 cctgtaagtg aagcgccggc agaaatcaca gggaacatcg aaagagctca agaagaaatc
      481 gaaccgcaat attctttgct tcgaacaata gtatcaacac aatggctaga gaaaagccat
      541 gacattagtt ggaatagtcc gtatgcagtt gtagatatat atagcaaaca gaatggagac
      601 aataaataca gactagaata taggcacggt agcagcccgt ttgtaaaatc acagacatct
      661 ctaaatgaaa gatgcgacct tttaatattc cgtatacagg gagaagaaga gattcaagaa
      721 aagtatttta tggatgtcaa atgcaatgga gatgtagagc gcgccgattt gtattgtttt
      781 ttgtactcgg acccgaagga tacgaaagat ttttctgctg agggaaagaa aattgttgca
      841 gaccaatatg aagaagcatt ggaaacattt ctgctggtcg aagaataaac gccgattata
      901 tctgtgtctt cttttcttcc attcgcgccc gatactcagc tttcttcggg cagttctggt
      961 tgatgcaaaa tgcccatggc cgttttcctc tgctaatcag gagaacttct ggaaacgtac
     1021 acgcgtcaca catcttcccg cttgttttcg caagatatcc tctcgggaga gaaaagcttt
     1081 ttttgcactc aggatatttc gagcacgcaa tgaaataact tttgaacttc ggcgtgtacc
     1141 gtatctgcag gtcgccgctg cactcgcatt tcatgacaaa tacttcttcc cgcattgttt
     1201 ctttatacga cccggaaagt gcagacccta tttctttctc atgctcttta aattttccaa
     1261 gaacatcggt aagaaaaact tccgcatgct tcaatgcgtc gctttctgag cgttgccctt
     1321 gttgaatttt ttccatctcg tcttcaaaat ctcgcgtaag ctgttcatca agaatctccg
     1381 ggcaatattt tattaaaacc tcaatagtcg ccatcccaag tccggtaact tcaagagaat
     1441 ctcttcctcg aatatagttc ctgtcaaata atccttcaat aatatccgag cgtgttgctt
     1501 tcgtccctaa atttttcttt tcgagttcct taataaccga agcaggagtg tatcgtttag
     1561 ggggctgtgt ttctttatca tgaatattaa gctgttttac ttgcaaggtt tgtttttctt
     1621 ccacgtgcac gtcttcttct tcgagtttga cgtacggttt gtaaaaggca tgccagtttt
     1681 cttttatagt atgcgtcccg ctcgtagtaa acttttccag gccaatatca atagtaattt
     1741 gcgcagtttc acgcactgct gggtcggcaa acgttgctaa aaatcttcgg acaataagat
     1801 catacagttt cacttctctc tcagtaagac tttttggggc ttctcccgtt ggataaatag
     1861 caggatgtgc tgcatctttt ttctttccat tgtatggctg cagctctttc cgtgcgagaa
     1921 gattgccgca gagagtggta taagaatcct gatgtgacaa tttttccaag acttttcgat
     1981 acccgatgac gggcgataac tggttagacg aagttcgtgg ataggaaatg taagaattaa
     2041 tatacaaatt ctgcgcaagt tctaatgttt cttttggctg gatatgcaag acgcggtacg
     2101 cttcgagttg taacgcggta aggtcaaaag gatgcggtgg cgcttgctgg aactgttttc
     2161 gttctacttt ttcaacaata gcaggttttc cttggcactt ttctacgatt gcctccggag
     2221 attttcgttc aggaaatttt ccgtgcttgt ggaatgctga aatttcttga cagacgagct
     2281 caagctccca atacggaacc gaaacaaaca cctgaatttc tttttcacgt tccgtaagca
     2341 gctttagagc tggtccttgc acacgcccgg agcttaaaat tttaaacatt cccgtcgcgt
     2401 gttttatgga aagcgtcaat gcacgggaaa gattaattcc aaacaaccag tcaagttcgt
     2461 gccgcgtgat tccagcctcg gcttgcccgt ggtccatatg cttcatgata tgatcatacg
     2521 attttcgcag atcttctttc gtcgtcgtag aaaatttcat ccgcagggca tctttcttcc
     2581 cgcaggcaaa tcggataata ttgaatccta ttacctcccc ctcaatgtca tagtcgcaag
     2641 caacaataaa cttgtctgct tctgaagaca atttttttat gagctgcagg tatggtttag
     2701 taaaagcaga gccttttgca acatcaaatg caggcttcca ttccatagaa aacacgggat
     2761 agctccagcc ttttttatcc ttctcagcaa cggagtataa atgaccaacg gcacacgcaa
     2821 caataatttt ttctccatta tgggttaatt cataataggg aatacgcttg aggtagacat
     2881 gcttctccgg cattttatct gcgagtgctt ccgctatctt ttgtgcagtc gatggttttt
     2941 cactaattat taacgaagtc attttgtgaa gaaaaaggag aaacgtataa aaaggtttcc
     3001 cttaattttt cgagaaatac gataaataag cctcaaagag aaagattttt atattctaat
     3061 aaacgttctc accgatatgg agaacataaa ca
//
LOCUS       DATDZU010000020         6685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1599257, whole genome shotgun sequence.
ACCESSION   DATDZU010000020 DATDZU010000000
VERSION     DATDZU010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6685
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1599257"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VJJ79_00595"
     CDS             complement(<1..350)
                     /locus_tag="VJJ79_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004045504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HLC22256.1"
                     /translation="MKKHSKKYLELAKKIDQEKLYSIEEAVKLVKETSLSSFKGNVEA
                     HINLIEKIPSLQVDLPHGTGKTIRVAVFASGDAAKEAKDAGADIVGDSDLVEKVQKGV
                     IDFDVAIAVPDMMP"
     gene            complement(352..777)
                     /gene="rplK"
                     /locus_tag="VJJ79_00600"
     CDS             complement(352..777)
                     /gene="rplK"
                     /locus_tag="VJJ79_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018201775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HLC22257.1"
                     /translation="MATKKVKTTIKLNLPAGEATPAPPLGPALGQHGVAIMEFVKAYN
                     ARTEKMKGTIIPAVVTIFEDRTFSFVTKLPPLTTLIKQALKVEKGSKTPGKSSAGTLT
                     MEQVRKIAEEKLPDLNTKNVEAAMRIVEGAARSMGIQVK"
     gene            complement(827..1444)
                     /gene="nusG"
                     /locus_tag="VJJ79_00605"
     CDS             complement(827..1444)
                     /gene="nusG"
                     /locus_tag="VJJ79_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008481824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HLC22258.1"
                     /translation="MKKKAVPKKEKVSKPKQQKTVVEAEKKPVEPSNAFWYVVHTYSG
                     HEMKVSHALKQRIESMQLEKSIFDILVPTQEKIEIKGGKKEKVKEKIFPGYILIKMVL
                     NDESWFAVRTTPGVTAFVGMGDKPTALPQKEVETILRFTKLEAPKYKAMFTVGDAVRI
                     TDGPFAEFLGTVDEINEEKGKVKVLVSVFGRETPVELDFLQVKQI"
     gene            complement(1446..1634)
                     /gene="secE"
                     /locus_tag="VJJ79_00610"
     CDS             complement(1446..1634)
                     /gene="secE"
                     /locus_tag="VJJ79_00610"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HLC22259.1"
                     /translation="MATYNPVAFLREVQVELGKVKWPSRKEAVKLTAIVIGVSAAVSL
                     YIGLLDFVFAKVMEILVK"
     gene            complement(1916..2059)
                     /locus_tag="VJJ79_00615"
     CDS             complement(1916..2059)
                     /locus_tag="VJJ79_00615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22260.1"
                     /translation="MDIDHLTLSEKGIGYFPFLEFFSEHIGIVESTYRGIACLHRWFA
                     RLT"
     gene            2116..>6685
                     /locus_tag="VJJ79_00620"
     CDS             2116..>6685
                     /locus_tag="VJJ79_00620"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLC22261.1"
                     /translation="MATSHPLESLPRLLTRIPRKRDGTPLVGYYGIQKILEKETLNTI
                     EKRRKMFQACQVQERVSRRFSPQEKISAIEKVILNNQSLLEVARELKVSRQCLYKWIK
                     AYQSIAKTLQPSSELESAFFEGLSDQYPTGSSHWKWVGRKVKEKVVKVALANPRDALP
                     QLMFKFPKKEDGSPLISYYSAQKVLEEAGLNTLEKRIEKARLLGILDKPPRLEGEISS
                     PRPADIRPLVLPNAPPQGRFDRVLKLTSVSNLVLLFFLFIFCYFSLLLSFEGSKVGFF
                     IASISLLFGFFFFLYSLKYYFTIASILLYRGSTIQEKRRTGLVSNLDTIQLPENSPFV
                     SLHIASYNEKRVIDRILIACTSQEYENYEVVVADDSTDETVEILERWKNHPKVKIHHR
                     ETRAGFKGGALQEALRIMDPRTEFVIVLDADFIPYPDTIIQFLKYFTAAVGTYNQPLE
                     YSQSQIAAIQGYQWHVLNKSENWITRGVRSEYAGSYVVERSGTEFLGSLKQIAGSVYM
                     IRADVLKYFGWGTSITEDFQLTLRLYEKGYKVIYTPYIQAPAECVSTIKRLIRQRMRW
                     AEGHSFNVKQMFKRLMKSSFLSFSEKMEFLYLSPYYLQAAFFIIGTLSWFVSEAVFHT
                     SLPYWTSLWGWSLVFTNMFALPLMNSVGLFLEEAEEKDYAGFISFVMLSYLIAPFQAY
                     AAVKGLLEKEEGTWFRTPKSGKVTDTFQKGRLLRLLTGFLPGRMGSKGQIAFSQERRI
                     DPIRFSFVSAHNTFTSLRIKKRMSWLGTGMLVLCLTLTTLLLSLTPLIQEGLEVSAQT
                     QFGAVDLFNVPEKQNLSDENTTLQMEETKTEEETSIAEILGQEGTKELTLHRVNETTY
                     GMKSLDGSIIEVGTERNSPPQPYVKLHKWDGEASLKVEIPFFTTEIPEVVDKKLRYYG
                     EGVGIDFYPKEPEKGKELDELGNEHPYVMNEEGGIEFDTILYKKPISNTIEFSIQTSN
                     LDFYYQPPLNQEQHEEGINCTETTCWDKEGNITEFRPENIVGSYAVYHSEKRDHVIGK
                     TNYKTGKAFQIYRPKIFDAVGNEIWGTLNINAETDLMTITIDQIWLESAVYPVVVDPT
                     LGFTVAGGTELRNGDDNQYGIKITAPNNGTITKHTTYIDDRYWDAAVYDWNSSTGGDK
                     VAEAGVYQAAGSSPGWVDLTFGTEVSITGATDYWLMVGADGGGGGYPKSIFYDSGSSG
                     DGIENDNGGGFPPPGTDFSEDPMSATSQARKYSIYATYHELSGRIWSSGFELNSLTQG
                     VEWDYVWHPSYMTLSAGAARSGSYGLDINVTSNTAEVEKILPSADVVYMRTFLKFPSS
                     VPTSTYYLMVIYDPDYNRYWQVKINSSSQLELENNAYSTVATTSISAGDWHRLELKID
                     VSNPSSTSVEAKLDGATFATDSSDFSYRSNPYLKYARLGPTGTSTTGQVYLDDIAINS
                     DVGSYQNSWPGDGKIVHLKPNAAGDASDWTNDYTYVDETTPDDATTLVASNTANQIDD
                     HNIENSSTAGIASSDTISLVQVGARFNGA"
BASE COUNT         1929 a         1353 c         1491 g         1912 t
ORIGIN      
        1 tttggcatca tgtctggaac agcaattgcg acatcaaaat cgattacacc cttttgtact
       61 ttttcaacaa gatcactgtc cccaacaata tctgctcctg cgtctttcgc ttcttttgcc
      121 gcgtctcctg acgcaaagac ggccacacga atagtttttc ctgtcccgtg gggaaggtca
      181 acttgtaggg atgggatttt ttctatgaga ttgatgtgcg cttcaacatt tcccttaaaa
      241 gaagagaggg aggtttcctt cacaagcttt actgcctctt cgatcgagta aagcttttct
      301 tggtcaatct tcttggctag ttccaggtat ttctttgagt gctttttcat cttatttcac
      361 ctggatcccc attgagcgtg cagcgccttc aacgatccgc attgctgcct caacattttt
      421 ggtattaaga tccggaagtt tttcttctgc aattttacgt acttgttcca ttgtgagtgt
      481 tcctgctgaa ctctttccgg gtgtctttga ccctttttcc actttgagcg cttgtttaat
      541 taacgttgtc agaggtggaa gttttgtgac aaaagagaac gtacggtcct caaaaatggt
      601 cacgacagcc gggataatcg ttcctttcat tttttctgtt cttgcgttgt atgccttgac
      661 gaattccatg attgcaacgc cgtgttgtcc aagcgctggc ccaagcgggg gagcgggtgt
      721 cgcttctcct gccggaagat ttaatttaat agttgttttg accttttttg tcgccatagt
      781 ctttctctct tatcatattc taaagaaaaa atcaaaaagc ggtcacctag atttgtttga
      841 cctggagaaa gtcgagctcg acgggcgtct cacgtccgaa cacagataca aggactttta
      901 ctttcccttt ctcttcatta atttcatcca cagttccaag aaactcagca aacggtccgt
      961 cagtaatgcg taccgcatca ccgacagtaa acattgcctt gtattttggt gcttccaatt
     1021 ttgtaaatcg aagaatagtt tcaacttctt tctgaggaag agctgtcggc ttgtctccca
     1081 ttccgacaaa cgcggttact cccggagttg tccgaacagc aaaccagctt tcgtcattga
     1141 gcaccatttt aataaggata tatcctggga aaatcttttc tttgactttt tctttctttc
     1201 cacccttaat ttcgattttc tcctgggtgg gaacaaggat atcaaaaata cttttttcta
     1261 actgcataga ttcgatgcgc tgcttcaacg catgcgaaac tttcatctcg tgtcctgagt
     1321 atgtgtgaac aacgtaccag aaagcgttcg acggctctac tggttttttc tcagcttcaa
     1381 caactgtttt ttgctgtttt ggttttgaaa ctttttcttt tttgggaacg gcctttttct
     1441 tcatgttatt tcactaagat ttccatgacc tttgcaaaaa caaaatcaag taaccctatg
     1501 tacagggaaa ctgctgcgga tactccaatc acaatggcgg tcaatttgac agcctctttg
     1561 cgactgggcc actttacttt tcctaattct acttgaactt cacgcaaaaa agcaacggga
     1621 ttataggttg ccataaaaga taccttttgc ttcctaagct ggccaatgat accagaaaag
     1681 gctaggcttg taaagcgaag gaaaagcaac gtttttctcg caatagttga tcattctctc
     1741 tggaaagacc tgagacagtt catcatgaaa taagttattt tcagatatga cgttttttta
     1801 ttcttgacgg catttattta tagttgttaa catagaagaa gaactcttat ggaacgcttg
     1861 acctctgaac aaaaacttac cgcggttgaa catgttctcg tagaccacct gcctcttacg
     1921 tcagtcgcgc aaaccatcgg tgtaagcagg caatgcctct ataagtggat tcaacgatac
     1981 caatatgttc tgaaaagaat tccaagaacg gaaagtaccc gatgcctttt tctgagagcg
     2041 ttaagtgatc aatatccatt aggatctcaa cattggaagt cgacagggag cgaggtgcgt
     2101 cggagggtag ttgaggtggc tacatcgcat ccgttagaat ctttgccgcg gcttcttacc
     2161 cgtattcctc gaaaacgtga tggtacgcca cttgtcggat actatggcat tcaaaaaatt
     2221 ctcgaaaaag aaactcttaa tacgatcgaa aaacgacgaa aaatgtttca agcttgccaa
     2281 gtacaagagc gggtatcgag acgattttct cctcaagaaa aaatttccgc gatagagaag
     2341 gttatactca ataatcaaag tttacttgaa gtggctcgcg agcttaaagt ctcacgtcaa
     2401 tgtctctata aatggatcaa ggcgtatcaa agtatcgcaa aaacactcca accgtcgtct
     2461 gaattagaat cagcgttttt cgagggtctt agtgaccaat atcctactgg ttccagccat
     2521 tggaaatggg tagggagaaa agtgaaagaa aaagtagtta aagtcgcatt agccaatccc
     2581 agggatgctc ttccgcaact tatgttcaaa ttcccgaaaa aagaagatgg atccccactt
     2641 attagctatt acagtgctca aaaagttctc gaagaggcgg gcttaaatac ccttgaaaaa
     2701 cgaatagaaa aagcccgttt gttaggtatt ctcgataagc cacctcggct cgaaggggag
     2761 atttcttctc caagaccagc ggatatacga cctttagttt tgcccaatgc acctccgcaa
     2821 ggacgttttg atcgtgtttt gaaactcact tcagtttcaa atcttgtcct tcttttcttc
     2881 cttttcatct tctgctattt ttctctgctt ttgtcatttg agggctcaaa ggttggattt
     2941 ttcattgcat ctataagttt attgttcggc ttctttttct ttctgtattc actgaaatat
     3001 tatttcacca tagcttcgat tcttctctat cgcggctcaa cgattcaaga aaaaagaaga
     3061 acagggctgg tgagtaatct cgatactatc cagctacctg aaaattctcc attcgtttct
     3121 cttcatattg cctcatacaa tgagaaacgt gtcattgaca ggattctcat agcttgtacg
     3181 agccaggaat acgaaaatta tgaagtggtt gttgctgatg attccacaga cgagaccgtg
     3241 gagattttag aacggtggaa gaatcatcca aaggttaaga ttcatcatcg ggaaacgagg
     3301 gccggcttta agggaggcgc tcttcaggaa gccttgcgaa tcatggatcc tcgcaccgag
     3361 tttgtgattg tgttagatgc agattttatc ccgtatccag atacgataat acaattcctc
     3421 aagtatttta cggctgcagt tggtacatat aatcaaccgc ttgagtactc ccagtcgcaa
     3481 attgcagcaa tccaggggta ccagtggcat gtgttaaaca aatcagagaa ctggattaca
     3541 cgaggagtaa ggagtgaata tgcaggaagt tatgtggtag aacgatcagg aacagaattc
     3601 ctaggctcat taaaacagat agcaggatca gtgtatatga ttcgtgcaga tgtcctcaaa
     3661 tactttgggt ggggaaccag tatcacagag gattttcaac taaccttacg actctacgaa
     3721 aaggggtaca aagtcatcta cactccgtat attcaagcac cggcagaatg tgtgtctacg
     3781 atcaagcggc ttattcgaca aaggatgagg tgggcagagg gacactcttt taatgtgaaa
     3841 cagatgttca aaagacttat gaaaagctcc tttcttagtt tctcagaaaa aatggagttt
     3901 ttatatttgt caccatacta tctacaggca gcctttttta tcattggcac attgagttgg
     3961 tttgtgtcag aggcagtgtt tcacacaagc ttaccatatt ggacaagcct gtggggctgg
     4021 tcactagttt ttactaatat gtttgcgcta cctttaatga attcagtggg acttttcctt
     4081 gaggaagcgg aggagaaaga ttacgcggga tttatctctt ttgtcatgct ctcatacctt
     4141 attgctccat ttcaagcgta tgcagctgtg aaaggattgt tggaaaaaga agaaggaaca
     4201 tggtttcgca caccgaaatc agggaaagtc acagacacat ttcaaaaggg gaggctgctt
     4261 cgtttattga ctggatttct gccgggaagg atgggatcaa agggacaaat cgccttttct
     4321 caggagagaa gaattgatcc gatacgtttt tcctttgtat ctgcacataa cacgtttaca
     4381 tctctacgaa taaaaaagag gatgagctgg cttggaacag gtatgctcgt cttatgtttg
     4441 acactgacaa cgcttcttct ttcattgaca ccgttgatac aagaagggtt agaggtatcg
     4501 gctcaaacac agtttggggc ggtagatttg tttaacgtac cagagaaaca aaatctttca
     4561 gatgagaata caacgctaca gatggaggaa acaaagacag aagaggaaac ctcaattgct
     4621 gagatcttgg ggcaagaggg tacgaaggaa ctcactcttc atcgcgtgaa tgagacaacg
     4681 tacgggatga agtcgcttga tgggagcatt atcgaggtgg ggactgaaag gaattctcct
     4741 ccacaaccct atgtaaagct tcacaagtgg gacggagaag caagtctgaa agtggaaatt
     4801 cccttcttta cgaccgaaat acctgaagtt gttgataaaa aacttcgata ttatggagaa
     4861 ggcgttggaa ttgacttcta tcccaaagag ccagagaaag ggaaagaact ggacgagttg
     4921 ggaaatgaac acccttatgt gatgaacgaa gagggtggga ttgagtttga tacgatttta
     4981 tacaaaaaac caatttcgaa tactattgag ttttccatcc agacaagtaa cttagatttt
     5041 tattatcaac ctccgttgaa tcaagaacaa catgaagaag gaataaactg cacagaaaca
     5101 acgtgttggg acaaagaagg gaacataacg gagtttcgtc cggagaatat tgtcggatcg
     5161 tatgcggtgt atcactcaga gaagcgagat catgtcattg gtaagacaaa ctacaaaact
     5221 gggaaagcat ttcaaatcta ccgccccaaa atctttgatg ctgtaggaaa tgagatctgg
     5281 gggacattaa acataaatgc agaaactgat cttatgacaa tcactataga tcaaatatgg
     5341 ctggaaagtg cagtgtatcc agttgtggta gacccaacgc ttgggtttac cgtagcgggg
     5401 ggaaccgagt taagaaatgg agacgataac caatatggaa ttaaaataac tgctcccaat
     5461 aatgggacga ttaccaaaca cacaacatac attgacgata gatattggga cgctgctgtg
     5521 tacgattgga acagttctac gggcggagat aaagtggccg aagcaggagt ctatcaagct
     5581 gctggctcca gtcctggttg ggtagatttg actttcggga cagaagtttc aataactggt
     5641 gctactgact actggttaat ggtcggagcc gatggtggtg gcggtggata tccaaagagt
     5701 attttttatg attcaggctc ttctggagat ggtattgaga atgataatgg gggaggattt
     5761 ccccccccgg ggacagattt ttcagaagat ccaatgtctg ccacaagtca agcaagaaaa
     5821 tactctatct atgcgacata ccatgaactt tcagggagaa tatggtcctc tggttttgaa
     5881 ctgaatagtc tcacacaggg ggttgaatgg gattatgtgt ggcatccgag ttacatgacg
     5941 ttatctgcag gagcagcacg gagcggaagt tacggtcttg atataaatgt gacaagtaat
     6001 acggctgaag ttgagaaaat acttccaagt gcagatgtcg tatatatgag aacatttcta
     6061 aaattccctt catcggtgcc aacatccacg tattacctta tggtcattta cgatcctgac
     6121 tataatagat attggcaggt aaaaataaat tcaagtagcc agcttgaact ggagaacaac
     6181 gcatacagta ctgttgccac cactagtatc agtgcagggg actggcacag acttgagtta
     6241 aaaatagatg taagtaaccc atcaagtacc agtgtagagg caaaattgga tggtgcgacg
     6301 tttgcgactg atagttcaga tttctcgtac cgtagtaatc cgtatttgaa gtatgcgcgt
     6361 cttggtccta ccggaacctc aacgacagga caagtgtatt tagatgacat tgcaattaat
     6421 agcgacgtag gctcttacca gaattcctgg ccaggagacg gaaaaattgt acatctcaag
     6481 ccaaacgcag caggggatgc aagcgattgg acgaatgatt atacctatgt tgatgaaaca
     6541 actccggatg acgcaacaac gcttgttgca tcaaatacag caaaccagat agatgatcat
     6601 aatatcgaaa atagttccac cgctggaata gcttcaagcg ataccatcag tcttgttcaa
     6661 gtaggagcta ggttcaacgg ggctg
//
LOCUS       DATDZU010000021         2117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1471177, whole genome shotgun sequence.
ACCESSION   DATDZU010000021 DATDZU010000000
VERSION     DATDZU010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471177"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1359)
                     /gene="guaB"
                     /locus_tag="VJJ79_00625"
     CDS             complement(<1..1359)
                     /gene="guaB"
                     /locus_tag="VJJ79_00625"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: protein motif:HMM:NF012690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HLC22262.1"
                     /translation="MQNLRFGLTFNDVLLVPKRTPLSSRTEADLKTKFTRNITLNIPL
                     VSSNMASVTEHKMAILMARAGGLGVLHQFCTIDEQVEEVKKVKRSTSYVIDHPLTVQD
                     HITIAQAIEKMETQGVTSLLVMRADELVGIFTSRDYLFETDLNKRISDVMTPKERLVT
                     APYGITHEEAKKILHQHRIEKLPLVDHGRLLGLITTKDIHKLEAWPNASRDSKGRLRV
                     GAAVGVKDTLERAQALVDGGVDVLIIDIAHCHSDFALQRIRELKSLFPTVDLMAGNIA
                     TAEAAKDLIEAGADGLKVGIGPSAVCTTRIMSGSGVPQLTAIMDVISVARQYGIPVSA
                     DGGMQTPGDVVKAIAAGASTIYSGSLFAGTDEAPGFIITKDGRKYKRYMGSASYDSNH
                     ERKERLEGKQVKEKLDVYVEGVATLVDYKGPVEGVITGLTKGLQSGLSYCGARTIDEM
                     HTN"
     gene            1451..1858
                     /locus_tag="VJJ79_00630"
     CDS             1451..1858
                     /locus_tag="VJJ79_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014288262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HLC22263.1"
                     /translation="MPQEFSVGVVVFCKEEFLLLHYEAGHWGFVKGHVEKGEKPEETA
                     RRELKEETGIKAIHLVKGFKEKEEYFYKKEGKTVHKEVVYLLAETKENKVRISYEHTD
                     YKWVSYGEAMQIITHMQTKNILKKAYSFLKQHS"
     gene            complement(1886..>2117)
                     /locus_tag="VJJ79_00635"
     CDS             complement(1886..>2117)
                     /locus_tag="VJJ79_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011153447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HLC22264.1"
                     /translation="VAIFPGGVNKLEDKDGNVLPDCFLLQHGATALDFAYHLHTDIGE
                     GFIRAIDVKTKRAVGKEYVLKHRDVIEIVTRK"
BASE COUNT          645 a          511 c          398 g          563 t
ORIGIN      
        1 gttggtatgc atttcgtcaa ttgtccgagc accacagtaa cttaaaccac tctgcagccc
       61 tttagttaaa ccagtaatca ctccttctac cggcccttta tagtccacaa gcgttgccac
      121 gccctctaca tagacatcga gtttttcttt cacttgcttt ccttcaagac gctcttttcg
      181 ttcatgatta ctatcatatg aggcactgcc catatagcgc ttgtactttc gcccatcttt
      241 tgtaatgata aatccaggcg cttcatccgt tcctgcaaaa agagaacctg aataaatagt
      301 acttgccccg gcagcgatgg ctttgacaac atcacctggc gtttgcattc cgccatcagc
      361 agaaacagga atgccatact gccgtgcaac agaaataaca tccatgatcg cagtaagctg
      421 cggtactcca gatcccgaca taattcttgt cgtacaaact gccgatggcc caatgccgac
      481 tttcaacccg tcagctccag cttcaatcaa atctttcgca gcttctgcag ttgcaatatt
      541 ccccgccata agatcaaccg tcggaaaaag agactttaat tcgcgaatac gctgcaacgc
      601 aaagtcagaa tgacaatgcg caatatcaat gatcagcaca tcaacgcccc catcaacaag
      661 cgcttgtgcg cgttcaagcg tatccttcac accaacagcc gcaccgacac gaagtcttcc
      721 tttagaatcc ctagatgcat ttggccatgc ttccaattta tgaatatctt tcgtagtgat
      781 taatcctaaa agtcgtccat gatccacaag aggtaacttc tcaatgcgat gctgatgcag
      841 aatttttttt gcttcctcat gagtaatgcc atacggagca gtaacaagcc gttcttttgg
      901 cgtcatcacg tcagaaattc tcttgttcaa atcagtttca aacaaataat ctctcgaggt
      961 aaaaatgccg acaagctcgt cggcgcgcat aaccaaaaga ctcgtaactc cttgcgtttc
     1021 cattttctca attgcctgtg caatggtgat atgatcttgc acggtaagcg gatggtcaat
     1081 aacataactt gtgctccgct ttactttttt tacttcctct acttgctcgt caatggtaca
     1141 gaactgatga agaacgccaa gaccgccggc acgtgccatc aaaatagcca tcttatgctc
     1201 agtaacagac gccatatttg agctcaccaa aggaatattt agggtgatat tccgcgtaaa
     1261 tttcgttttc agatctgctt cagtacgaga actgagagga gtccgttttg gcacgagaag
     1321 aacatcattg aatgtcagac caaagcgaag attttgcata catactcttt tcccaccttg
     1381 ggggtttaaa aagatttata gactgaagaa gaaaataaat tatttaagga caagtattcc
     1441 tctgataccc atgccacaag aattctctgt aggtgttgtc gtattctgta aagaagagtt
     1501 tctcttgctg cactatgagg caggccactg ggggtttgtc aagggtcatg ttgagaaagg
     1561 agaaaaacct gaagaaactg cacgacggga actcaaggaa gagacaggca taaaagcaat
     1621 acatctcgtc aaaggattca aagagaagga agaatacttc tataaaaaag aaggaaagac
     1681 cgtgcacaaa gaagtggtct acctactcgc agaaacaaaa gaaaataaag taaggatctc
     1741 atacgagcac accgactaca aatgggtttc ctatggagag gcaatgcaaa taataacaca
     1801 catgcagaca aaaaatattt tgaagaaagc atattcattc ttgaagcagc actcctaaaa
     1861 agtttcaaaa acagaagata aaatattatt ttctcgtcac aatctctata acgtctctgt
     1921 gtttcagcac gtattctttc cctactgctc ttttcgtctt cacatcaatc gcacgaataa
     1981 acccttctcc gatatccgta tgcaaatggt atgcaaagtc taaggcagtt gctccatgtt
     2041 gtaagaggaa acaatcaggc aacacattcc cgtctttgtc ctctagttta ttaacaccgc
     2101 caggaaagat cgcaacc
//
LOCUS       DATDZU010000022        13150 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_528208, whole genome shotgun sequence.
ACCESSION   DATDZU010000022 DATDZU010000000
VERSION     DATDZU010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 13150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13150
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_528208"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..649)
                     /locus_tag="VJJ79_00640"
     CDS             complement(176..649)
                     /locus_tag="VJJ79_00640"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HLC22265.1"
                     /translation="MITETHNPQEEEKQNALPEEKSKEQEYLDQLQRLQAEFINYRSR
                     VEKEKVEIMDTAKEQILIKFLDIKDNFERAPKLDEGMELIYKQFLTIFEEEGVQDIDT
                     HGVFNPELNLAVGTNNDVEKNHIAAVLQKGYVRKNNVLRPSIVIVGSKEKTHDGM"
     gene            complement(912..1085)
                     /locus_tag="VJJ79_00645"
     CDS             complement(912..1085)
                     /locus_tag="VJJ79_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22266.1"
                     /translation="MNKAGELFGLSGFSVRVIAGVIILLSMPFLIENPASVTAQIVFA
                     FGNFLMVIGGLAK"
     gene            1237..1845
                     /locus_tag="VJJ79_00650"
     CDS             1237..1845
                     /locus_tag="VJJ79_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22267.1"
                     /translation="MHLTKESIDLYFGTDVRDFHSYFEDILETKRINPTEIRYRHTVN
                     GKTFIWYRGYDRNTSQEQATISYPTDCQRNRVVNLFDRILERRERGLEGTRHLVFEYT
                     ELPLSFKFNDADIYKGFHRSFKGMKLDAKKIIKGREVLLAHVEYVEGILYPVKNVFDI
                     DGTHLVQPSIAALCDYFRQQEDNIPEDVEEKLKEVQKIRKED"
     gene            complement(1938..2642)
                     /locus_tag="VJJ79_00655"
     CDS             complement(1938..2642)
                     /locus_tag="VJJ79_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22268.1"
                     /translation="MTDLTLPLVIGAALADSINPCVIGVLIFLVAFMTKVFNSSERML
                     VGGIIYTAVVYVTYLLLGLGILAFTVSYGFSVAFYWVAAIIAIGAGLLEIKDFFSYGK
                     GFSLQLLPGSAMRIKKYTQYIADAQKKHIFYSYLIAGLLGVFVVFVELPCTGAPYLAI
                     LGLLSQGQYENAVPLLLLYNLVFVLPLLIIIGIAYFGTSSKMLETWRKEHRGLLRLFV
                     GLFLIALGVYMLFVIT"
     gene            complement(2639..3475)
                     /locus_tag="VJJ79_00660"
     CDS             complement(2639..3475)
                     /locus_tag="VJJ79_00660"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HLC22269.1"
                     /translation="MQKEREHFLLKVLIVLGIIAFLTSLYLVKNHYDVSTGSFCDFGA
                     TISCSLVNTSIYSEFLNVPVAFMGALWATFLMLIAWWTMEKRSYLLALILWSVFGLGA
                     VIYFIIAEIILKALCPFCTLVHVIVLASLIISLALYTKEKNKPTLKELWNDAHSFIIF
                     LVLVNLLPFIIFNWPQQEPDVDLDTFAQCIDTNGVNMYGSFRCGACAKERKLFGDSFQ
                     YINEIECHPEGENPQTELCLAKGIEGTPTWILEQNGTEMKRFQGYMDLEDLADFSGCQ
                     LQ"
     gene            3559..4215
                     /gene="nth"
                     /locus_tag="VJJ79_00665"
     CDS             3559..4215
                     /gene="nth"
                     /locus_tag="VJJ79_00665"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012256674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HLC22270.1"
                     /translation="MDTPTIEKVIAILRKEVQQYNAPIVTLVAQTHHDPFRVLIATVL
                     SLRTKDDITAKACKKLFAVADTPQAMRKLNAQKIEKLIYPVGFYRVKAKNILRICHKL
                     VDEYHGKVPDDLDELLKFPNVGRKTANLVLTEGYNIPAVCVDVHVNRISNRFGYVKTK
                     TPHETEMALRKELPKKYWIEYNFLLVAHGQHICSPISPWCSKCPVNKYCERVGVIKSR
                     "
     gene            complement(4212..4706)
                     /locus_tag="VJJ79_00670"
     CDS             complement(4212..4706)
                     /locus_tag="VJJ79_00670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22271.1"
                     /translation="MPKAFSHLERRLLLEGIFYFATEKGERDFPSEKRLMYDIFIHGV
                     LAYLGIPHVVRLASEKEMWDLYCNGLVDGQRELQPRIRDALDMLLKPEYRPSWQETEF
                     YEHFIGSWGMPGICNNSNSFITCSIIKTLPLRDSLLESLTQEERTDIEGIAFAIRRYL
                     RDDD"
     gene            4796..5365
                     /locus_tag="VJJ79_00675"
     CDS             4796..5365
                     /locus_tag="VJJ79_00675"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HLC22272.1"
                     /translation="MVSDVIIVLGGGVTKEGTPTGSSLARIKKTVELFQECAASYVLM
                     SGAYSNKISYTPMKTEAQAMKDYAMQLGIPEEKIILEEFSMETVGNAYFSREIVKEKS
                     WKSLLIVTSDFHVERTAYIFQKTFGTKYSCKVVPVSHAYSEELDVRKEKEARALHWLK
                     QHMDIFPDGDENGVRQILENVFDCYGTLK"
     gene            5389..5745
                     /locus_tag="VJJ79_00680"
     CDS             5389..5745
                     /locus_tag="VJJ79_00680"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLC22273.1"
                     /translation="MDNLIKRDELKELIDKKGSYVLIDVRQKEELAYGMIPTAHNVPL
                     HEFEDAFKFSPKEFEARYHFAKPSKEDTIIFHCRTGSRSAQATAYMHSKGYTHAKNFR
                     GSVNEWSEIDQNVRMY"
     gene            5748..6191
                     /locus_tag="VJJ79_00685"
     CDS             5748..6191
                     /locus_tag="VJJ79_00685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22274.1"
                     /translation="MKPVIIPYNSMLAILDRALRNAGLAPSYCQQEFEDIETGEQETG
                     ILLTHVEQPHPMHIFPKKHLPKVGVLGFVNGAEPGKGTVPLHTIVPEENDILALAYVI
                     EGLYKGDFSTTLMKGEQIPGLRVLLQSYKVIKEDLQKKTYTLLIK"
     gene            complement(6204..6485)
                     /locus_tag="VJJ79_00690"
     CDS             complement(6204..6485)
                     /locus_tag="VJJ79_00690"
                     /inference="COORDINATES: protein motif:HMM:TIGR04289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eight-cysteine-cluster domain-containing
                     protein"
                     /protein_id="HLC22275.1"
                     /translation="MKKYVILILLFFLIGCAAPFEEVLPEEAFEFCGTSTYSTCISDA
                     DCVSDGCSGQVCRSASEESIITTCEWTECYDKEEFDVACGCVNGQCQWA"
     gene            6540..6986
                     /locus_tag="VJJ79_00695"
     CDS             6540..6986
                     /locus_tag="VJJ79_00695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1947 domain-containing protein"
                     /protein_id="HLC22276.1"
                     /translation="MKRVSLRIKDVNKLLEQYKLELSKKDRVELLEEKILLVNGTPAF
                     FYHDTHLVPTLKYLQDHPVLKRVVVDMGAVRFIVSGADVMRPGVVEIDPEISEEEYIV
                     IVDVQHKKPLAVGKALHDGKTMQAMKSGRIIKNIHYVSDDIWNVQL"
     gene            7093..9189
                     /locus_tag="VJJ79_00700"
     CDS             7093..9189
                     /locus_tag="VJJ79_00700"
                     /EC_number="6.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015324450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017178 - diphthine-ammonia ligase
                     activity [Evidence IEA];
                     GO_process: GO:0018193 - peptidyl-amino acid modification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthine--ammonia ligase"
                     /protein_id="HLC22277.1"
                     /translation="MCGIIGAFQRADAFHIVRTGLEIVAERGKDGCGYYDGAVQYAKT
                     ANELPSSSAPNILGHTLHAIVEFVPQPILDEDGVIAVNGEIYNWKELADEYKIIARND
                     SDLLLKLLNKLGIEKSLERVRGIYAFAYWKGNVLYLARDILGVKPLWFSHEGKALLFC
                     SEKKGIEQYAVHVEELNPRQIFVYDCKKGDCKRMELSFFTRAPEVNANVLEELKKLFE
                     DAVRVRVPEKKFGLLFSGGIDSVLVAKILKDIRKDFTCYTAAASEDAPDLVSAKEVAK
                     MLGLKLKYKVVTKEDTEAYLRKIVPLIEDNNVTKVGVALPLYIASELAREDGNKVIFS
                     GAGADELFGGYHRYKTTNDLKKLNSDCYSDVLKIYERNTYRDDVITMNNNLELRVPYL
                     DKNLVAFALRIAPSLKIKDTVEKYILRELAVKMGIPEKLALRKKKAAQYGSGFDKMIE
                     KLAGKKSKSAYLQQFYNKGNVRLGALISSGKDSWFAAYTMHKQNYDIACIITMKSANK
                     DSYMFHTPNVNLVELQAKAAGIPLVMQETTGEKEDELEDLKEAMRVAKEKYKIEGIVS
                     GALYSNYQRERIEKVADAVGLKIFAPLWHIDQEYEMRELLRQGFQIILSSVAAEGFDI
                     SWLGRVLTENDVDKLVVLQNKYGLNIAFEGGEAESLVLDCPLFKKRIVLKETEISEED
                     THTAQIIVKKATLEKK"
     gene            9217..9534
                     /locus_tag="VJJ79_00705"
     CDS             9217..9534
                     /locus_tag="VJJ79_00705"
                     /inference="COORDINATES: protein motif:HMM:NF016109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQ-loop domain-containing transporter"
                     /protein_id="HLC22278.1"
                     /translation="MNHLHYYKRKIERRVPEKDRNIVILDNVILFISVVAPFANLVQV
                     YKIFSMQSANGVSVLAFTIFAILNIPWVFYGIVHKEKPLIITFTLWFFTNSLVVLGAM
                     MYS"
     gene            9597..10625
                     /locus_tag="VJJ79_00710"
     CDS             9597..10625
                     /locus_tag="VJJ79_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22279.1"
                     /translation="MRYIGERYTAEELQEIRDTVTHQRVLHPTERRNLQKILYSKSKE
                     EVDELNECLGLLVTNKPLYEKLLHDPVRHDYGIIPFLPETYPLFYECDTVPKVFVVSS
                     CGKDELIIPIEKREFVFCIQHPKKSLIVKDQKFPGEQKFARQAAELGIGPTQYKTLNG
                     FLTEEVVHGEGFLSFAQKWPRKESIIEFMYETGKTIGECLDAFHRAGMVYNNSILLDI
                     CDMETLQDGHFCFYNGKPTKLYDFGQAFYIKDPKSYTKEDVLKFTLMKKEYKIRRIAD
                     PTYAGTYDDVLNLFRKQLTSLAEDEVRLGDVLHLLNSVGLYCPPTLENITEPFLEGFQ
                     KTYTFAIP"
     gene            complement(10622..11380)
                     /locus_tag="VJJ79_00715"
     CDS             complement(10622..11380)
                     /locus_tag="VJJ79_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013551777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HLC22280.1"
                     /translation="MRLVSWNVNGIRAILNKGFYDAVKKLDADILCIQETKAHPDQVD
                     AKLPMYEHHFWNAADKKGYAGTAVFSKVQPLHVTQGIGISAHDTEGRVLTLEFEKFYI
                     VNVYVPNSGRGFVRLNYRAQWDKDFLQYLKHLEKKKPVVVCGDFNVAHTAKDLANPSS
                     NYNKTAGYTQVEIDGIEQVIASGFVDTFREFHTEGGHYTFWSYMFHARKKNIGWLIDY
                     FFISHALRQNLKEAFIVDTIMGSDHCPVGVMLSI"
     gene            complement(11424..12206)
                     /locus_tag="VJJ79_00720"
     CDS             complement(11424..12206)
                     /locus_tag="VJJ79_00720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22281.1"
                     /translation="MNRTQTIPHVRHNPFRNVLYGTSLAGILAGCSKEDTSCDSGYVY
                     DGENCVEDDWQWGERYSFRDVRNTCTSLAALDSLTFCKGLEMEGGYSTCISFYDTFKD
                     DLQTTAASFDGSKTDVYVANYGFSYETPYGTYEGKVPTITFNQDNLLLSCQAYHITDG
                     YEEDSDHYFLSTICHADTFQPGNFLTGSCVLENLPSLTLMINSSKYPGLSYGVTIHGD
                     SFFSTETLTSDQVLLHEDFSENLQEMVCASNDYLDSPELCRQ"
     gene            12300..>13150
                     /gene="map"
                     /locus_tag="VJJ79_00725"
     CDS             12300..>13150
                     /gene="map"
                     /locus_tag="VJJ79_00725"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II methionyl aminopeptidase"
                     /protein_id="HLC22282.1"
                     /translation="MTPKECYLRAGLIHQEVCNKIKPFVKPGVSFLELARKIESDIAK
                     YQDASLAFPVNIQVNNEVHYSPLPYDTRVLTKDDLVKVDIGVHINGYIADGAFTVTFD
                     KKYQDMVDFTEKVLKKTLTGLKPGMKISEIGRRLDEQMQGSKYKIIRNLMGHQVQQWE
                     LHSTKSVLVYEDPNSMSTMEHGEAFAIEIFITDGNGFIRSSPKAVIYAMKHTLMPVRD
                     VKVKKLCQQIHDKRKTFPFSERYVVEHLKYSKVDFFSLKQSGNMMSYPLLVERPGSKI
                     AQFEDVI"
BASE COUNT         4023 a         2684 c         2908 g         3535 t
ORIGIN      
        1 tgcgactgct gaatttgttg ttcctaagtc aatacctatg attttgctca ttgtgttttt
       61 gtctccattt gtttttatat attaaaacca atcctcaaga tcgtccctta ctttggtcct
      121 aaggttcttc cgaccgtccc cacagagttc tctgttaatt tctcccttaa aagttttaca
      181 tgccatcgtg tgttttctcc ttgcttccga caatcacaat agacggccgg agcacgttgt
      241 tttttcttac atagcccttt tgcaggactg cagcaatatg atttttttcc acgtcgttgt
      301 ttgtcccgac agcgagattg agctcgggat tgaagacgcc gtgtgtgtct atgtcttgta
      361 cgccttcttc ttcgaagata gtgaggaact gcttgtagat gagttccatg ccttcgtcta
      421 attttggcgc gcgctcgaag ttgtccttga tatcgaggaa tttgatgagt atctgttctt
      481 ttgcagtgtc cataatctct actttttctt tttcgactct tgaacggtag ttgatgaatt
      541 ctgcttggag ccgttgtaat tggtctaaat attcttgttc ctttgatttc tcttctggaa
      601 gagcgttctg tttttcctct tcttgcgggt tgtgtgtttc agttatcatg tttgtttgag
      661 ataaacctaa tcgagttaaa agtaactagt atataaaact ttctaatcag ggggctttgc
      721 ccataaagta gttagaaatg gcactttact cactaaccgt gaagtgcttt tttactatcg
      781 gatgtaaaag gttaacataa atacagttaa ccatattaca aatgcaacaa taatccaatt
      841 tttgtttctc atgaaactgg cgtatgctaa ccccaaacta gataggatta ttggaataaa
      901 aactgatgcc gtcattttgc aagacctcct attaccataa gaaagtttcc aaatgcgaaa
      961 acgatttgag ctgtgacgct tgcaggattc tcaataagga acggcattga taaaagaata
     1021 ataactccag caatcaccct aactgaaaat cccgataaac caaataattc tccggcttta
     1081 ttcatagaga tagaaatatt atttaggtat ttaacctttt cttttattgt gcaaagccca
     1141 aaagacccgt taacgttaca atacatggaa ccttcggctg tgcaaagcac ccttcattca
     1201 aaacatttaa atattctttt taataaaatg gtatatgtgc accttacgaa agaatccatt
     1261 gacctctact ttggaacaga cgtcagagac ttccatagct attttgaaga tattctagaa
     1321 accaagcgga tcaatccaac agaaatccgg taccggcaca ccgtcaatgg gaaaacgttc
     1381 atctggtaca ggggctatga caggaataca tcccaagagc aagcgactat ctcgtatcca
     1441 acagattgcc aacgcaatcg cgtggtgaat ctctttgaca ggatattgga gagaagggaa
     1501 agaggtcttg aaggtacgcg ccatctagtt tttgagtata ctgagctgcc attgagcttc
     1561 aagtttaatg atgcagacat atacaaggga ttccaccgct cgttcaaagg tatgaagctt
     1621 gacgccaaaa aaataatcaa aggcagagaa gtgctacttg cccatgtgga gtatgtagaa
     1681 ggaatattat atccagtaaa aaacgtcttt gacattgacg gcacgcacct agttcaaccg
     1741 tccattgccg cactttgcga ctacttccgc cagcaagagg acaatatccc tgaagacgtg
     1801 gaagaaaaat taaaagaagt gcaaaaaata agaaaagaag attagcaaaa ttcgcagacg
     1861 ttttttttgc ccgtcttttt cttcgcaact tttttcttca cagtcttttt cttttgtgcc
     1921 attgttttca cctcctatta tgtaatcaca aaaagcatgt agacgccgag cgcaatgagg
     1981 aacaggccaa caaataaccg taataatccc cggtgctcct ttctccacgt ttctaacatt
     2041 ttcgatgatg tcccaaagta tgcaatgcca atgataataa ggagaggcaa tacaaagaca
     2101 agattataca gcaacaataa cggtaccgcg ttttcgtact gtccctggct caataatcca
     2161 aggatagcaa ggtacggcgc accagtgcac ggcaattcca caaacacgac aaacacgccc
     2221 aaaagaccgg caatcaagta actgtagaag atatgctttt tctgtgcgtc cgcaatgtac
     2281 tgcgtgtatt ttttaatgcg catagcgctt cccgggagca gttgtagcga aaatcctttc
     2341 ccgtacgaaa aaaaatcttt gatctccagc aatcccgcac cgatggcaat gatcgcagca
     2401 acccagtaga atgcaaccga gaaaccatat gaaacagtga acgcgagaat accgaggcct
     2461 aataataaat aggtgacgta taccactgcc gtgtaaatga ttccgccgac cagcatgcgt
     2521 tcggaactat tgaagacttt tgtcatgaac gctacgagaa atatgagaac gccaataacg
     2581 caagggttga tgctgtcagc aagcgcggcg ccgatcacga gaggcagggt aaggtcagtc
     2641 attgcagctg gcatccggag aagtcggcaa ggtcttcaag atccatgtac ccctggaagc
     2701 gtttcatctc cgtcccgttc tgctcaagga tccacgtcgg cgttccttca atgccttttg
     2761 cgaggcagag ctcggtctgc gggttttctc cttcaggatg gcactcgatt tcattgatgt
     2821 actggaacga gtcgccaaac agttttcgtt cttttgcaca ggcgccgcag cggaacgatc
     2881 cgtacatgtt cacgccgttt gtatcgatgc actgcgcaaa cgtatcaagg tccacatcgg
     2941 gttcctgttg tggccagtta aagatgatga acggaagaag gttcaccagg acaaggaaaa
     3001 taatgaaact atgcgcatcg ttccacagtt ctttcagcgt aggtttattt ttttctttcg
     3061 tgtagagtgc aagagaaata atcagtgacg ctaggacaat cacgtgtacg agggtgcaga
     3121 acgggcaaag cgcttttaag ataatttcag cgatgataaa atatataacg gcgccgagtc
     3181 caaaaacaga ccataagata agcgcgagca ggtacgaccg tttttccatt gtccaccatg
     3241 caattagcat caagaacgtt gcccagagcg cgcccatgaa tgcaacggga acattgagga
     3301 actcagagta gatgctcgtg ttgacaagcg agcaggaaat agttgcgcca aagtcgcaga
     3361 acgatcctgt acttacatca taatggttct ttacaaggta gagcgacgtc aggaatgcaa
     3421 taattccgag gacaataagt accttgagca aaaaatgttc acgctctttt tgcataaaaa
     3481 tattagaata gtttctgtat tataaaacta ccgtttttct tcagaaagtt taagtacttt
     3541 taatcttttt tgaaaagaat ggacacgccg acaatagaaa aagtaattgc tattcttaga
     3601 aaagaagtac agcagtataa cgcaccgatt gtcacgcttg ttgcgcaaac gcaccacgat
     3661 ccgttccgtg ttctgatagc gactgtattg agtctgcgaa caaaagatga catcaccgcg
     3721 aaagcatgta aaaaattatt tgcagttgca gacacgccgc aggcaatgcg caagcttaac
     3781 gcgcagaaaa tagaaaaact gatttatccc gtaggatttt atcgcgtcaa agcaaaaaat
     3841 attcttagga tttgtcacaa gcttgtggac gagtaccacg gaaaagtgcc ggatgacttg
     3901 gacgaactcc tgaagtttcc gaatgtcgga agaaaaacag caaacctcgt gttgacagaa
     3961 gggtataata ttcctgcagt ctgtgtcgac gtgcacgtga accgtatcag taatcgtttt
     4021 gggtatgtga agacaaaaac gccgcatgaa acagaaatgg cattacgaaa agaattgcct
     4081 aaaaaatatt ggatagaata taactttctt ctcgttgcac atggtcagca catctgctcc
     4141 ccaatctcgc catggtgctc aaagtgcccg gtgaataaat attgtgaacg tgtcggtgtg
     4201 ataaaaagcc gttaatcatc atctcgcaga tatcgtctaa tagcgaacgc aatgccttcg
     4261 atatcagtac gttcttcttg tgtcaggctt tctaacaaag aatcacgcag cggcaacgtt
     4321 ttgataatgg aacatgtgat gaaagaatta gaattattac agataccggg catgccccac
     4381 gagccaatga aatgttcata aaattctgtt tcctgccagc tcggtcggta ctcaggtttc
     4441 aaaagcatat ccaatgcatc tcgtattctc ggctgtagtt ctctctgtcc atccacaagc
     4501 ccattgcagt acaggtccca catttctttc tctgatgcta gacgaacaac atgcggtatg
     4561 ccgagatacg caagaacacc atggataaaa atatcgtaca ttaaccgttt ttcagaagga
     4621 aagtcacgtt cacctttttc tgttgcaaag taaaagattc cctcgaggag cagtcgcctc
     4681 tcaaggtggc tgaatgcctt aggcataaaa taatatatag tatctctgct tataaatata
     4741 tattagattc tgtttttgag aaatatttat aattatctta gataaaaata agagtatggt
     4801 ttctgacgtt atcattgttc tcggaggtgg cgtgacaaaa gaaggaacgc ctacgggaag
     4861 ttctttggcc cgtataaaaa aaacggttga attgtttcag gaatgtgcag cttcgtacgt
     4921 gctaatgtcc ggtgcatact ccaacaaaat ttcttacacg cctatgaaaa cagaagcaca
     4981 ggcaatgaaa gactatgcaa tgcagttggg catccctgaa gaaaaaatta ttctcgaaga
     5041 attctctatg gaaacagtgg gaaacgcata cttctcaaga gaaattgtca aagaaaaaag
     5101 ctggaaaagt ttgctcattg tcacgtccga ctttcacgta gaacgaacag catacatttt
     5161 tcaaaaaaca tttggtacaa agtattcttg taaagtagtt cctgtgtcac atgcttattc
     5221 agaagaatta gacgtaagaa aagaaaaaga agcgcgagca ctccattggt tgaaacagca
     5281 tatggatatt tttcctgacg gtgatgagaa cggtgtgcgc cagatattag agaacgtttt
     5341 tgattgttac ggaacactta aatagtggcc ttttttttgt acattgttat ggacaatctt
     5401 atcaagcgag acgaattaaa agagctcata gataagaaag gaagctatgt gcttatcgac
     5461 gtgcgccaaa aggaagagtt agcctatggc atgatcccta cagcacacaa cgtcccgttg
     5521 catgagtttg aagatgcgtt caaattttca ccaaaagaat ttgaagcacg ctaccatttt
     5581 gcaaagcctt caaaagaaga cacaatcatc tttcattgtc gtaccgggtc aagaagcgca
     5641 caggcaactg cgtacatgca cagcaaagga tacacccatg caaaaaattt tcgaggcagc
     5701 gtcaatgaat ggtcagagat agatcagaat gtacggatgt attaaccatg aaacctgtca
     5761 ttattcctta caattcaatg ctcgcaattc ttgatcgggc attgcggaac gcaggtcttg
     5821 ctccttcata ttgtcagcag gaatttgaag acatagagac aggggaacaa gaaacaggca
     5881 ttttgttgac gcatgtcgaa cagccacatc ctatgcatat ttttcctaag aaacatttgc
     5941 ctaaagttgg cgtgcttgga tttgttaacg gtgcagaacc aggaaaagga acagtgccgt
     6001 tacacaccat cgtgccagaa gaaaatgata tcctcgcact tgcgtatgtg attgaaggac
     6061 tttataaagg ggatttttcg acaaccctta tgaaaggaga gcaaataccc gggcttcgtg
     6121 tgctgcttca gagttacaaa gtaataaaag aagatctgca gaaaaaaaca tacacgcttt
     6181 taattaaatg agagaaaatt ttcttaagcc cactggcatt gtccgtttac acagccacag
     6241 gcgacatcga actcttcttt atcataacat tcagtccatt cgcacgtcgt aatgatgctt
     6301 tcctctgaag cgctcctgca cacttgccca gaacaaccat cagagacaca gtcggcgtcg
     6361 gaaatgcatg tactgtatgt cgacgttccg cagaattcaa atgcttcttc cggcaaaact
     6421 tcttcgaatg gcgcagcaca ccctattagg aaaaagagca aaatcaatat cacgtacttc
     6481 ttcatcaaag atagtaaatg cgaaaaacta tataaagttt tttctctttg ttctgcactg
     6541 tgaagcgtgt ttcattgcga atcaaggacg tcaataaact gttagagcag tataaattag
     6601 aactttcaaa aaaagatcgc gtcgagcttc tcgaagaaaa aatccttcta gtgaatggca
     6661 cgcccgcatt tttttatcat gatacacatc ttgttccaac gttaaagtat ctccaagacc
     6721 atccagtttt gaaacgtgtt gtcgtcgaca tgggtgcggt gaggttcata gtgagcggcg
     6781 cagacgtgat gcgtccaggt gttgtcgaga tagatccaga aataagtgaa gaggagtaca
     6841 ttgttatcgt cgacgtgcag cacaagaaac cgttggccgt tgggaaggcg ttgcatgacg
     6901 gaaaaacaat gcaggcaatg aagtcaggaa gaatcattaa aaatattcat tacgtcagcg
     6961 acgatatttg gaatgttcaa ctataaaaat tctttttgct ctatgaccga cggaagtcct
     7021 cctctagaga gaatattccc tttccaaaaa tgaaagaatt gtttataaag gcacgtttat
     7081 tcttccgacg ctatgtgtgg cattattggt gcattccaga gggcagacgc attccatata
     7141 gtgcgaactg gcctggagat tgttgccgag cgaggaaaag atggctgtgg gtattatgat
     7201 ggagcggtgc agtacgcaaa aacagcaaac gaacttccgt catcttctgc gccaaatatt
     7261 ttgggtcata cgctgcatgc aattgtcgag tttgtgccgc agccgatcct agacgaagat
     7321 ggcgtcattg cggtcaatgg tgaaatctac aactggaaag aattggcgga cgagtacaag
     7381 atcattgcac gaaatgattc tgatcttctt ttaaaacttc ttaacaagct gggcatagag
     7441 aaatcgttag aacgtgtccg tggcatctac gcgtttgcat actggaaggg aaacgttctg
     7501 tatcttgcac gggacattct cggggtgaag ccattatggt tcagccacga gggaaaagca
     7561 ttgctatttt gttctgagaa aaagggaatt gaacagtatg cggtacatgt ggaagaactc
     7621 aacccgcgac aaattttcgt gtacgattgc aagaaaggtg attgtaaaag gatggaactg
     7681 tcgtttttta cacgtgctcc agaagtgaac gcaaacgtgc tagaagaact caagaaactt
     7741 ttcgaggacg cagtgcgtgt tcgtgtgcct gaaaaaaagt ttggtctcct tttttctggt
     7801 ggcattgatt ctgtactcgt tgcaaaaata cttaaagata ttagaaaaga ttttacgtgc
     7861 tacacggctg cggcaagtga agatgcacct gaccttgtgt ctgcaaaaga agttgcaaaa
     7921 atgctcggat tgaaattaaa gtataaagtg gtgacaaagg aagatacaga agcatacctg
     7981 agaaagattg ttccgttgat agaggacaat aatgtgacta aagtgggcgt tgcgcttccg
     8041 ttatacattg catctgagct ggcgcgcgag gacggaaaca aagttatttt ctcaggagca
     8101 ggtgcggatg aacttttcgg cggataccat cgctacaaaa caacaaacga tcttaagaaa
     8161 ttaaactctg actgttactc agacgtctta aaaatctacg agcgaaacac atacagagac
     8221 gacgtaatca caatgaacaa caacctcgag ctccgtgtcc cataccttga taaaaacctc
     8281 gttgcatttg cactgcgtat tgctccatca ttgaaaataa aagataccgt agaaaaatat
     8341 atcttgcgag agcttgcagt aaaaatgggt atacccgaga aattagcatt gaggaagaaa
     8401 aaagcagcgc agtatggaag cggctttgac aagatgattg agaagcttgc tggaaaaaaa
     8461 tcaaagtccg cgtacctgca acaattttac aataaaggaa atgttcgtct cggcgcgctc
     8521 atcagctctg gaaaggacag ctggtttgct gcgtacacga tgcacaaaca aaattacgat
     8581 attgcgtgta tcattaccat gaaaagtgca aataaagatt catacatgtt ccatacgcca
     8641 aatgttaatc tcgtcgagct tcaagcaaaa gcagcgggta ttcctctcgt gatgcaagaa
     8701 acaacgggag aaaaagagga cgagctcgag gatctcaagg aagcaatgcg tgttgcaaaa
     8761 gaaaaataca agattgaagg catcgtctcc ggcgcattat actcgaatta ccaaagggaa
     8821 aggatagaaa aagttgcaga tgccgtcggg ttgaaaatct ttgcgccatt gtggcacatt
     8881 gaccaggagt acgagatgcg tgagctgttg cggcaaggct tccagattat tctcagttca
     8941 gttgctgcag aagggtttga catttcgtgg ttaggtcgcg tgctcacgga gaacgatgtc
     9001 gacaagctcg tcgtgttaca gaataaatac ggcctaaata tagcgtttga gggcggtgag
     9061 gcagaatcat tggtgcttga ttgccctttg ttcaagaagc gcattgttct gaaagaaaca
     9121 gaaatctctg aggaagatac gcacactgca cagattattg taaagaaagc aacgctagag
     9181 aaaaagtaat aaacctatgc atctttaaag agcgtgatga accaccttca ttactataaa
     9241 agaaaaatag aacggcgtgt gccagagaaa gatagaaaca ttgttattct agataatgtg
     9301 attcttttta tctcggtcgt cgccccattt gccaatttag tacaggtgta caagattttt
     9361 agcatgcaga gcgccaacgg cgtttccgtg ttggcgttca ccatttttgc gatattgaac
     9421 atcccttggg ttttttatgg gatcgtgcac aaagaaaaac cgcttattat tacgttcacg
     9481 ttatggttct ttacaaacag tttggttgtt ttaggcgcaa tgatgtacag ttgaacgttt
     9541 aagcataaaa atatttctta gtaatattta taaatatgat gaaaacaaga aaaagtatgc
     9601 gctacattgg ggaacggtac acagcagaag aactgcaaga gattcgagac acggtcacac
     9661 accagcgtgt tcttcatccc acagaacggc gaaatctgca aaaaatactt tattctaagt
     9721 caaaagaaga ggttgatgaa ttaaacgaat gcctcggact tctcgtgaca aataaaccat
     9781 tatacgaaaa attgctgcat gatccggtga ggcacgatta tggtatcatc ccttttcttc
     9841 cagaaacata tccattattc tacgaatgcg atactgttcc aaaagtcttc gtcgtgtcgt
     9901 cttgcggtaa agatgagttg attattccta ttgaaaaacg cgagtttgtc ttttgcattc
     9961 agcatccgaa gaaatcgctc atagtgaaag atcaaaagtt tccaggagag caaaagtttg
    10021 cgcggcaggc agcagagctt ggcataggcc caacacagta taaaacactc aacggttttc
    10081 taacggaaga ggttgttcat ggggaaggtt ttctttcctt tgcacagaaa tggccgagaa
    10141 aagaatctat cattgagttc atgtatgaga caggaaaaac tattggcgaa tgcctcgacg
    10201 cgttccatcg tgcaggaatg gtgtacaata acagcatact cctcgatata tgcgatatgg
    10261 aaacgctgca ggacgggcat ttttgttttt ataatggaaa accaacaaag ctttacgatt
    10321 tcggtcaggc attttatatc aaggatccaa agagttacac gaaagaagat gtgctgaagt
    10381 ttaccttgat gaaaaaggag tataagatac gaaggatagc agacccaaca tacgcgggaa
    10441 catacgacga cgtgctgaat cttttcagaa aacaactgac atcgcttgca gaagacgagg
    10501 ttcgccttgg tgatgtcctg catcttctca acagcgtcgg tctgtattgt ccacccactt
    10561 tagaaaatat aaccgaacca tttctggaag gatttcagaa aacttacacg tttgccattc
    10621 cttagatgct gagcatgacg cccacgggac agtggtccga gcccatgatt gtgtcaacga
    10681 taaacgcttc tttgagattc tggcgcagcg cgtgcgagat aaaaaaatag tcaatcagcc
    10741 agccgatatt ttttttccgt gcgtggaaca tataactcca gaacgtgtag tgcccgcctt
    10801 ccgtatgaaa ctcgcggaac gtgtcgacga atccagaggc gatgacctgc tcaatcccgt
    10861 caatctcgac ttgcgtgtac cctgcagttt tgttataatt tgaagatggg ttagcaagat
    10921 cttttgccgt gtgcgcaaca ttgaaatcgc cgcagaccac gacgggcttt ttcttttcga
    10981 gatgtttcag gtactggaga aaatccttat cccattgtgc acggtaattc agtcgcacaa
    11041 aaccgcggcc agagtttggc acgtacacat tgacgatgta aaatttttca aactctaacg
    11101 tgagaactct tccttccgtg tcatgcgcag aaattccaat gccttgcgtg acatgcaacg
    11161 gttgtacttt tgagaacact gctgttcccg cgtacccttt cttgtccgca gcgttccaga
    11221 agtgatgctc gtacattgga agcttcgcat cgacctggtc tggatgcgct tttgtctcct
    11281 ggatgcagag aatgtctgcg tcgagctttt tcaccgcatc ataaaatccc ttattgagaa
    11341 ttgcacggat gccgttgacg ttccacgaga cgagacgcat acatataact aaatgttttc
    11401 tccctattta atcatttcgc cagttattgt ctgcaaagct caggagagtc caaataatcg
    11461 ttagaagcac agaccatttc ttgaaggttt tcagagaaat cttcgtgaag aagaacttgg
    11521 tcagatgtaa gcgtctcagt gctaaagaag gaatctccat gtattgtaac gccataggaa
    11581 agtcctgggt atttagagga attgatcata agagtgagag aaggcaaatt ttcaagtaca
    11641 caggatccgg tcagaaaatt ccccggttgg aaggtatctg cgtgacagat ggtactcaga
    11701 aaatagtgat cactatcttc ttcataaccg tcagtgatat ggtaggcttg acaacttagg
    11761 agaagattat cctggttaaa ggtgatagtt gggaccttgc cttcataggt accataggga
    11821 gtctcatagg aaaatccgta attggcaacg tagacgtctg ttttagatcc atcgaaagat
    11881 gctgcagttg tttgaaggtc atctttgaat gtatcataga atgaaatgca ggtgctatag
    11941 cccccttcca tttctaatcc tttgcaaaac gtaagcgagt ctaatgccgc taaagaggtg
    12001 caggtattac gaacgtcgcg aaaggaatac cgttcgcccc attgccaatc atcttccaca
    12061 caattctcgc catcatagac ataaccagag tcgcatgagg tatcctcttt gctacagccg
    12121 gcgagaatac cagcaaggct tgtgccgtaa agaacgtttc ggaaaggatt gtgtctgaca
    12181 tgaggaatgg tttgtgtgcg attcatagta cgcatggaag aaacatgcta ttattaagat
    12241 ttgtgtaaca aaaaaagata gcaaccttta tatcccctag ttattttatt ctatctttca
    12301 tgacaccaaa agaatgttac cttcgcgcag gattgattca tcaggaagtc tgcaataaaa
    12361 tcaagccgtt tgtcaagcca ggagtttctt tccttgaact tgcaagaaaa attgaaagcg
    12421 acatagccaa ataccaagat gcatcattag cattccccgt aaatatacaa gtaaataacg
    12481 aggtgcacta tagcccgttg ccatacgata cgcgagttct gacaaaggat gatctcgtca
    12541 aggtagacat aggggtgcat atcaacggat atatcgccga cggtgcgttc accgtgacat
    12601 tcgataaaaa atatcaagac atggtggact tcactgaaaa agtattgaaa aaaactttga
    12661 ctgggttaaa gccagggatg aaaatcagcg agattggaag acgtctggac gagcagatgc
    12721 agggatcaaa gtataagatt attcgaaacc taatgggcca ccaggtacag caatgggaac
    12781 tgcactcgac aaaatctgtt ttagtgtatg aagatccgaa tagcatgagc acgatggaac
    12841 atggggaagc gtttgcgata gaaattttta ttacggacgg caacggtttt atccgttcgt
    12901 ctccgaaggc tgtgatttat gcgatgaaac acacgttgat gccagtgcgt gatgtcaaag
    12961 taaagaaact ctgtcagcaa attcatgaca aaaggaaaac atttcctttc agtgagcggt
    13021 atgtggtcga gcacctaaaa tattcaaagg tggacttttt ctcattaaaa cagtcgggga
    13081 atatgatgag ctatcctctg ttggtggaac gtcctggctc aaagattgcg cagttcgagg
    13141 acgtgattta
//
LOCUS       DATDZU010000023         9800 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_991821, whole genome shotgun sequence.
ACCESSION   DATDZU010000023 DATDZU010000000
VERSION     DATDZU010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 9800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9800
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991821"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VJJ79_00730"
     CDS             complement(<1..324)
                     /locus_tag="VJJ79_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22283.1"
                     /translation="MGKRRGEVIAAVEVTILIFLITLGMIGYILLLPEEERAALLGQE
                     ATNGEEQQTATEVLLSEVPGEVTSTKSSTQTRSLEPMRLYSTTESTTETLVSSLTVSR
                     NIIQNN"
     gene            374..1438
                     /locus_tag="VJJ79_00735"
     CDS             374..1438
                     /locus_tag="VJJ79_00735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA surveillance protein pelota"
                     /protein_id="HLC22284.1"
                     /translation="MKIIFQDHKKGEVKIAITSLDDLWYLSQILDTGDEVSGKTERKI
                     KIGEGTENVKTVKKQVFLAITVEKVEFHSYANTLRVSGKVKEGPEDIPHGSYHTFDVE
                     EGTTIQIVKEQWLKYQEEKLKEAASEQGGMILIVTLDREEASYALLRPSGYTMLAEVQ
                     GEVGKKGYSTVEGKDFYSDVVKHIDMYSTRYAVENIIIASPAFWKEDVLKILKKKMPA
                     LVPKVVLATCNSLGKTGVEEVLKREEVRVVLKKDRTAREEAFVEELFREIAKGSLAVY
                     GFEAVLKAVDLRAVKILLVTDTLIHELRSAGTYSGLEAMMKSVDRAQGTVHIISTEHD
                     AGKKLQGLGGVGAVLRFRLE"
     gene            complement(1430..2488)
                     /locus_tag="VJJ79_00740"
     CDS             complement(1430..2488)
                     /locus_tag="VJJ79_00740"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLC22285.1"
                     /translation="MISIIGAGPAGNYLAYLLAKQGKNVHVYEDHKVIGCPVQCTGII
                     SHELENEMHIDKKFLTNTITQAKIYSPNGNSLLVKFKKKDYIVNRTIFDSHIAEMAMQ
                     EGAQFHLGHRFHGNVGRKLKINDQIIETDMLVGADGPFSRVAKSNGMWCDRQFVTGNQ
                     VTVEVDCDPTLVEFWVGIGLFGWLVPENESVARVGIVSYNSPARDLQQLLDMRCPHPK
                     ILSKEPGEIPLYNPKQILQKDTVYLVGDAATQVKATSFGGIIHGMKAAKVLAQDPMHY
                     QKNCRKDVGKDLYLSLLMRKAMDKFSPEDYNALVGLFNKEKLKNVLETKSRDYPSKFI
                     FDLLLAEPRLLTFAWKLL"
     gene            2815..3636
                     /locus_tag="VJJ79_00745"
     CDS             2815..3636
                     /locus_tag="VJJ79_00745"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HLC22286.1"
                     /translation="MLADLILVGVTLLVLLIASIFDLKTREIPDTLSYGLIVVALSIR
                     LINGVTAHAFSYFLYGLIGLGVAFIFGYVLYHLKQMGGGDAKLLMGFGAAFGSFGSTF
                     IVALALAILFIGGLYCFLWAFVIFVQHRGKAWPLFLSAIKKYRRLHSILLGLCILVLV
                     FGFLTPTVTQILLAALVVALIASFYLSFFIRVVEKVSFLRFVPLKELTEGDWLAKDVK
                     IKNKIILSARIPSLEEKHIHLLKEKGIKRVWIKIGIPFVPAYFIAVLSTVLIFFF"
     gene            complement(3633..4244)
                     /locus_tag="VJJ79_00750"
     CDS             complement(3633..4244)
                     /locus_tag="VJJ79_00750"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HLC22287.1"
                     /translation="MLTPEMIEDIKKQLTGLAPEEQQKRLKEVLAGLSTEEREQLVGK
                     QPCPFCLIAQGKIPAKKVYEDDDICAVLDINPANKGHTLIFPKEHAAILSQVPLPIVG
                     KLFDIANKVATAVFDAVHAEGTNIVVANGPAAGQTAPHVLVNVIPRYQNDTVAIQWNR
                     QKVEESELEALAETIKEKLPREKRPVEKPAVPKKEVKEQPRIP"
     gene            complement(4324..5091)
                     /locus_tag="VJJ79_00755"
     CDS             complement(4324..5091)
                     /locus_tag="VJJ79_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22288.1"
                     /translation="MLKIPTRDEWYSTIDWYPRENKMKRTFHSPLVFSLAQRWARWTN
                     NLIFPYELPQTRDERLEAELTEYEALKYTGVVLPVDDEQSNDKVLVYPYAHSRFQGID
                     VLTDLVKLSAHDRAEIERAGFHSLAKIHENGHVHGNAHLKNFLYLQDKGWFWIDLGTK
                     INETCEEELLIANDYLTFTLSLGEHIHDSEKQNNFYRHIYSGTMPRNIHDQHLPSLRR
                     LLEMHLDHPLKALISRRVSSTHLTELYKGLNHRHMHS"
     gene            complement(5095..5370)
                     /locus_tag="VJJ79_00760"
     CDS             complement(5095..5370)
                     /locus_tag="VJJ79_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011308352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 1-beta"
                     /protein_id="HLC22289.1"
                     /translation="MTLAGITVKVMPESVDVNLTELKKQCEREIYDFYKQVKELRTEE
                     EPIAFGLSALKFTFIVDESLGSDAVQEKLEKLSGVASVQVVDFRRLT"
     gene            complement(5374..5547)
                     /locus_tag="VJJ79_00765"
     CDS             complement(5374..5547)
                     /locus_tag="VJJ79_00765"
                     /inference="COORDINATES: protein motif:HMM:NF019374.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc finger domain-containing protein"
                     /protein_id="HLC22290.1"
                     /translation="MEKVLRCISTNVELTNKRGSVVFRCPKCSDADIVRSFHAREVGA
                     KYTCPNCKFEGPN"
     gene            5604..5692
                     /locus_tag="VJJ79_00770"
     tRNA            join(5604..5642,5658..5692)
                     /locus_tag="VJJ79_00770"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5639..5641,aa:Arg,seq:gcg)
     gene            5746..5819
                     /locus_tag="VJJ79_00775"
     tRNA            5746..5819
                     /locus_tag="VJJ79_00775"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5781..5783,aa:Arg,seq:ccg)
     gene            complement(5874..6125)
                     /locus_tag="VJJ79_00780"
     CDS             complement(5874..6125)
                     /locus_tag="VJJ79_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008086023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HLC22291.1"
                     /translation="MYDIVYSPKALKALEKLDKNIQERIINAVERLRIRPESYDIKKL
                     VGMTGYRFRVGDYRVLIDIYKNRLLILVLKIGHRKNIYD"
     gene            complement(6126..6344)
                     /locus_tag="VJJ79_00785"
     CDS             complement(6126..6344)
                     /locus_tag="VJJ79_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008604669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22292.1"
                     /translation="MATTIQVSENLLDTLKKKKIYEKESYEEVIWNLVEDTMEINEET
                     KKEIEQARADIKAGRFYTHEQVKKRLGL"
     gene            complement(6432..6719)
                     /locus_tag="VJJ79_00790"
     CDS             complement(6432..6719)
                     /locus_tag="VJJ79_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22293.1"
                     /translation="MVEDFEKRYAGEEEAFLKCCYGEGMFSHEYMVQFRLRPQLVGDY
                     NWMFVNKEDVVPLQKHEGLVRLVNFLDEGDSYVVGINDVGDHRVSRKRVYK"
     gene            complement(6703..7047)
                     /locus_tag="VJJ79_00795"
     CDS             complement(6703..7047)
                     /locus_tag="VJJ79_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22294.1"
                     /translation="METYRATFDISCGVSHGLGVKYPDTETREERIVAENPDDALKQA
                     LTYATRFAYDYLSDPETGKTTVALSHLRGPTGTVPLDTTKTIVERSTLDKILLLAVEE
                     VLPKERKDGGRF"
     gene            complement(7049..7999)
                     /gene="radA"
                     /locus_tag="VJJ79_00800"
                     /pseudo
     CDS             complement(7049..7999)
                     /gene="radA"
                     /locus_tag="VJJ79_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_048146514.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair and recombination protein RadA"
     gene            complement(8002..8244)
                     /locus_tag="VJJ79_00805"
     CDS             complement(8002..8244)
                     /locus_tag="VJJ79_00805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22295.1"
                     /translation="MPQPQKVLRSGNIEIAVWENERDTSEGGIVTYQSVSVRKTWRDA
                     QNMLQEQKLSLQKYDIERLLVLLRKVQEYLLLEDEK"
     gene            8416..9624
                     /locus_tag="VJJ79_00810"
     CDS             8416..9624
                     /locus_tag="VJJ79_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22296.1"
                     /translation="MNVSLKNVWKNTLYRNSLFIILSSVVTGIFGFVFWTFAARNYSS
                     QEVGLATTVISILGLLSNLSLLGFNIALLRYSKKDNGKLNFSAVFVSIVASIILAGIF
                     VIGVQYFLPAVGFLGENLWYASAFIIFTVINSLYLISNSIFIAEGKGYLVLMKESLFS
                     VTKVACILFLSGVTGLLVSWNAGIALGVLFSFFFIKMHIGFDLRQLKEIGGFTFYNYW
                     GHIFNMLPTLLLPLIITPFLGPSSTAYFYISWMIANGLFIVANATSTNFLSEASKKSN
                     QWKKKLDHALIFSGMGLLIGTGAILLFGHLILSLFSPEYLAGYTLLQVLAVSSIPYGA
                     RTLYVSFLNLRNNAREGAAVNFLVFFVTILGSVLFMEYGLIVIGISWNVANLAGLALG
                     MVLKQLEKTH"
BASE COUNT         2543 a         2078 c         2121 g         3058 t
ORIGIN      
        1 attattttgg ataatatttc gtgaaactgt cagtgaggaa acaagcgttt ctgtggttga
       61 ctcggtggta gaatagagcc gcataggttc taatgaccgc gtttgcgtgc tgcttttcgt
      121 cgatgttacc tctcctggca cttcagagag cagaacttct gtcgcagttt gctgttcttc
      181 tccattcgtc gcttcctgtc caagcaatgc tgcacgttct tcttctggca acaatagaat
      241 atacccaatc atcccgaggg tgatcaaaaa aataagaata gttacttcaa ctgcagcgat
      301 aacttctcct ctccttttgc ccatatccct ctgctataac tttattaata tataaacttt
      361 ttccatctgg cgaatgaaaa ttatttttca ggatcacaaa aaaggagaag taaaaatagc
      421 gataacctcc ttggacgacc tctggtacct ttcacaaatc cttgacacag gggatgaagt
      481 ttctggaaaa actgagcgaa agataaagat tggggaaggg acagagaacg tgaagacggt
      541 aaaaaaacag gtgttcttgg cgattacagt ggaaaaggta gaatttcatt cctatgcgaa
      601 cacattgcgc gtgtccggga aagtaaaaga aggaccagag gacattcctc acggttcgta
      661 ccatacattt gatgtggaag aggggacaac aatacagatt gttaaagaac agtggctcaa
      721 gtatcaggaa gaaaaattaa aagaggcagc aagcgaacaa ggcggcatga ttcttattgt
      781 aaccttggat agggaagagg caagttatgc gctccttcgc ccttctggtt atacgatgct
      841 tgcggaagtc caaggagaag tgggaaagaa aggctactcg acggtggagg gaaaagattt
      901 ctatagcgac gttgtcaagc acattgacat gtacagtaca cgctatgcag tagaaaacat
      961 tattattgcg agccctgcat tttggaaaga agatgtcttg aagatattga agaaaaaaat
     1021 gcctgcattg gttccaaagg tagtgctggc aacatgcaac agtctcggaa aaactggcgt
     1081 tgaagaagtt ctaaagaggg aagaagtgcg agtggtccta aaaaaagatc gaactgcacg
     1141 cgaggaagca ttcgtcgaag aattattcag agaaattgca aaaggttctc ttgcagtcta
     1201 cgggtttgag gcagtactga aagctgtgga tctgcgcgca gtaaagatac ttcttgtcac
     1261 ggacacattg attcatgaac tacgatccgc aggaacatat tcagggcttg aggcaatgat
     1321 gaagtcagtt gaccgtgcgc aggggaccgt gcacattatt tccacggaac atgatgcggg
     1381 gaagaaattg caagggttag gcggggttgg cgccgttctt cgttttcggt tagagtaatt
     1441 tccaggcaaa cgtaagaagt cgcggttctg caagtaagag atcaaaaata aacttagaag
     1501 gataatctct gctttttgtc tcgagcacat tttttaattt ttctttattg aataatccga
     1561 cgagtgcgtt gtagtcttca ggtgaaaact tgtccattgc ctttcgcatg agaaggctga
     1621 ggtacaaatc tttccccaca tccttcctac agtttttttg atagtgcatc gggtcttgcg
     1681 caagcacttt tgcagctttc atgccatgaa tgattccgcc gaatgatgtt gctttgacct
     1741 gtgttgcagc atcgccaacg agatataccg tatctttttg tagaatttgt ttggggttat
     1801 agagtggaat ctcaccaggt tctttgctaa gaatttttgg atgggggcaa cgcatatcta
     1861 aaagttgttg gagatcacgt gcaggagagt tgtacgaaac aatgccgacg cgggcgacgc
     1921 tttcattttc agggacaagc caaccgaaaa gtccgattcc gacccagaat tcaacaagtg
     1981 ttggatcgca gtcaacttcg acggtgactt ggtttccggt gacaaactgg cgatcgcacc
     2041 acattccgtt ggattttgca acacgagaga acggtccatc agcgccgacc agcatatccg
     2101 tttcaataat ttggtcatta atctttaatt ttctcccgac attcccatgg aacctatgcc
     2161 cgagatgaaa ctgtgcgcct tcttgcatcg ccatttctgc aatatgagaa tcaaatattg
     2221 ttcggttcac gatataatcc ttttttttga attttacgag gagagaattg ccgttcggtg
     2281 aataaatttt tgcttgagtg atggtgtttg tgagaaattt cttatcgata tgcatttcat
     2341 tttcaagttc atggctaatg attcctgtac attgcactgg acagccaatc actttgtgat
     2401 cttcatacac atgtacattt tttccttgct ttgcaagaag gtatgcaaga taatttccag
     2461 caggaccagc tccgatgatt gagatcattt tccgtcagaa acaaggcagc gatttatata
     2521 acttgtgtag aagaaaatat ttttgcgcac agcacgcaaa tttttttcta aaattttttc
     2581 tgcaaaaaaa agaaagttat ttaaactaac tcattatgta taataagtat ctttaacaaa
     2641 ataaaaaaag aaggggtgaa cacgaaaaat ggcagcaaag aagaaagcag caaaaaagaa
     2701 aagaaaatag tctcataact tctttgtgac aacctctttt ttgtttttct ctgttttttc
     2761 aaaacctatt tttttttcaa aacctattta aatcttcttt ccttgtcttt atgtatgtta
     2821 gcagatctaa tcctcgtcgg tgtaacgctt ctcgtacttc ttatagcgtc aattttcgac
     2881 ctgaagacaa gagaaattcc ggatacgctc agttatggtc tcatcgtcgt agcactcagt
     2941 attcgtttaa tcaatggtgt gacagcacat gccttttcat acttcctcta tggtcttatc
     3001 ggtctcggag tggcgttcat ttttggatac gtcctctatc atctgaaaca aatgggtggt
     3061 ggcgacgcaa aacttttgat gggctttggt gcagcgttcg gaagctttgg gtctacgttt
     3121 atcgtcgcgc tggcactagc aatacttttt attggtggtc tttactgctt cctgtgggca
     3181 tttgtaattt ttgttcaaca tcgagggaaa gcatggccat tgttcctaag cgcgataaaa
     3241 aaatatcgca gattgcatag catccttctc gggctttgca tacttgtctt ggtttttgga
     3301 tttcttactc cgacggtaac acaaattctg ttagcagcac tcgtggtcgc gcttattgca
     3361 tcgttttatc tttctttctt catccgcgtc gtcgaaaagg tcagctttct ccgctttgtt
     3421 ccattgaaag aactcacgga aggcgactgg cttgcaaagg atgtaaagat aaaaaacaaa
     3481 ataatcctct cggcacggat accttcgctt gaggaaaagc atattcatct tctcaaagaa
     3541 aaagggataa agcgtgtgtg gataaagata ggaatcccgt ttgtccccgc atatttcatc
     3601 gcagtgctct cgacagttct tatttttttc ttctaaggga ttcgtggttg ctctttaact
     3661 tctttcttag gcacagcagg tttttcaaca ggtctctttt ctctcggtaa cttttctttt
     3721 attgtctcgg caagtgcttc aagttcactc tcttctactt tctgcctgtt ccattggata
     3781 gcgacagtat cgttctggta ccgagggata acgttcacga gaacatgtgg agcagtctgt
     3841 cccgccgctg gaccgttggc aacaacaata tttgtccctt ctgcgtgcac ggcatcaaag
     3901 acggcagtcg caactttgtt tgcaatatca aagagttttc cgacgatagg aagaggcacc
     3961 tggcttaaaa ttgccgcgtg ctcttttgga aaaattaatg tgtgtccttt atttgcagga
     4021 ttgatgtcta gaactgcaca gatatcatca tcttcataga ctttttttgc gggaattttg
     4081 ccttgtgcga tcaggcagaa cgggcacggc tgttttccta cgagctgttc tcgttcttct
     4141 gtggaaagtc cagcgagaac ttctttcaat cttttttgct gttcttctgg tgcaagcccg
     4201 gtaagctgtt tcttgatatc ttcaatcatt tcaggtgtga gcatccggag agaaaaatat
     4261 taaggggtta aaagcctttc tataagacca tttttctaag aaataatctt gtgttctaga
     4321 tggctaagag tgcatatgcc tgtgattcag tcctttgtag agttccgtca gatgtgttga
     4381 cgagacacgt cgtgagatca atgcttttag aggatgatct aggtgcattt cgagtaaccg
     4441 ccgaaggctt gggagatgtt ggtcatggat atttcgtggc atcgtgccgc tgtagatatg
     4501 ccgatagaaa ttgttttgtt tttcgctgtc gtgtatatgc tcccctaagg aaagtgtgaa
     4561 tgtcaaataa tcattggcga tgagcaattc ttcttcgcac gtttcgttga tctttgttcc
     4621 aaggtcaatc cagaaccacc ctttatcctg caggtataag aaattcttca agtgcgcatt
     4681 tccatgaacg tgcccatttt cgtgaatctt tgcaaggcta tgaaaccctg ctcgttcgat
     4741 ctcagcacgg tcatgcgcgg aaagttttac taggtccgtc aatacatcaa tcccttgaaa
     4801 gcgtgagtgt gcataaggat aaaccagaac tttatcgtta ctttgctcat catcgacggg
     4861 aagaacaacg ccagtatatt ttagtgcctc gtattctgta agttccgctt caagccgttc
     4921 atctctggtt tgtggtagtt cataaggaaa aattaaatta ttggtccatc gcgcccagcg
     4981 ttgcgcaaga gagaacacga gaggcgaatg aaacgttcgc ttcattttgt tctcacgagg
     5041 ataccagtca atcgtagaat accattcgtc tctcgtaggg attttgagca tgatttaagt
     5101 caggcgtcgg aagtcaacta cttgcacact tgccacgccg ctaagcttct ccagtttttc
     5161 ttgaaccgcg tcagagccga gggactcatc aacaataaag gtaaacttca gtgcagaaag
     5221 accaaatgcg ataggctctt cttccgtccg cagttctttc acctgcttgt agaagtcata
     5281 gatttcccgt tcgcactgtt ttttgagttc agtaagattg acgtcaaccg attccggcat
     5341 gactttcacg gtgatgcctg cgagtgtcat ggtttagttg ggtccttcga atttacagtt
     5401 aggacaggtg tactttgcgc ctacttctct tgcatggaac gagcgaacaa tatctgcgtc
     5461 actgcacttc gggcacctga aaacaacaga tcctctttta ttggtgagtt caacgttagt
     5521 ggaaatgcat cgcaaaactt tttccatgtc agcaggaaaa acagaaaatg tttataaacc
     5581 tttggatttt ctcacaatga caagcccctg tagtatagcc tggatagtac ggagccctgc
     5641 ggacttttat ggcagtaagg ctcagactcg ggtccaaatc ccgacggggg cagttctatt
     5701 agaatgaata agcttttatg ttcgtgaaaa tttcttgtgg tggtcgccct tgtcgtatag
     5761 cttggatagt acggagccct ccggaggctt cagcctgggt tcaaatccca gcaagggcag
     5821 attcctacat agggttactt atcttccttt tattcttggt tgtcagcaga ttcttaatcg
     5881 tatatgttct ttcgatgtcc aattttcaag accagaatga gtaatctatt tttatagata
     5941 tcaataagaa cacgataatc accgacacgg aacctatagc ccgtcatacc aacaagcttc
     6001 ttaatatcgt aggattcagg tctgatccgt aatcgttcaa ctgcattaat aattctctct
     6061 tgaatatttt tatccaattt ttctaatgcc tttaacgcct tgggagaata gactatatca
     6121 tacatttaca aacccagcct cttctttact tgttcatgcg tatagaagcg accggctttg
     6181 atatctgctc tagcttgttc aatttctttc tttgtttcct catttatttc catagtgtcc
     6241 tcgacaaggt tccaaataac ttcttcgtaa ctctcttttt cgtagatctt tttcttcttc
     6301 aaagtatcta agagattttc actcacctgt atcgttgttg ccatagccat tgtataagtg
     6361 gcaatagtat ttaagatttt ctacgcctaa tgaacagaaa cggatggagc ttggtccaga
     6421 aaaacaacgt cttatttgta cacgcgtttc cgggaaacac ggtgatctcc aacatcgttg
     6481 atgccaacaa cgtaactgtc tccttcatcc aaaaaattaa ccagtcgaac aagtccttca
     6541 tgtttttgta aaggaacaac atcttcttta ttcacaaaca tccaattgta atcccccacg
     6601 agttgcggtc gaagacgaaa ttgaaccata tattcgtgag agaacattcc ttccccatag
     6661 cagcatttca aaaatgcttc ttcttctcca gcgtatcttt tttcaaaatc ttccaccatc
     6721 tttcctttcc ttcggaagta cttcttctac tgcaagaagc aagatcttat cgagcgtaga
     6781 acgttcgacg atcgtttttg tagtgtccaa aggaacagtg cctgtgggtc ctcttagatg
     6841 agatagggca accgtggtct tgcctgtttc aggatcgctg agataatcgt aggcaaagcg
     6901 tgttgcatag gtgagtgctt gtttaagggc atcatcagga ttttcagcaa caatacgctc
     6961 ctctcgtgtc tcagtatcag gatattttac accaaggcca tgagacacac cacatgaaat
     7021 atcaaacgtt gctcgataag tttccatctt acgccacgtc ctcgattcct ttctctgtga
     7081 tttgaaagat tgcttctccc tcaggcaggt acgggctatc aacaagtttc gcgactcgtg
     7141 ttcctttttt tcctcggcgg aagtacaagc gtgtcgtgct cgcatgcgca acgatgtgcc
     7201 cgccaaccgc ttccgtcggg tcgccaaaaa acgtgtctgg ttttgacatg acctgattcg
     7261 tgacatagac acagatgttg tacgtatcag caagcttgag cagcacgtgc atatgcttgt
     7321 taattttttg ctgccggtcg gccaatgtcc ctcggccaac aaactctgaa cgaaaatgtg
     7381 ccatgagcga gtcaacaata aggagcttca caggcaacgt ttcttttgtg atcaaatctt
     7441 cgactttttc tgcgcacatc atttgatgat cagagttgaa tgcacgcacg acttttatat
     7501 gtttcaatac ttttgctgcg tcaagtccat gttgttcaca tatctgttta atacgctctg
     7561 gtcggaacgt tgtttccgta tcaatccata tgctgtatga ttgtgggtct ccattctcgt
     7621 cgatatcaag cgcgttaatg gcaagctggt gcgccattgc actttttcct gaaccgtatg
     7681 cgccgaagca ctcggtgatg ccgccagact caaacccgcc gcctgtcaac gcgtccacgg
     7741 ctttcgctcc agtagaaaca cgcattatgg tctctcgttt cttgagcaac tcttctcctg
     7801 agacaaaccc catgtcgagg ttatttcgtg cagcattgat aactttccgt gcagaggcct
     7861 cgctcatgcc ggtagtttca gttaactctc caggagacgc aacagcaatc gccataaggt
     7921 tatggtaccc ggcttcacgc agtttttccg cagttgcggc gccaacgcca ggcaaatctt
     7981 caatatccat ttctttttta ctcatttttc atcctccagc aagagatatt cttgaacttt
     8041 tcgtaagaga acaagcagcc gttcaatgtc atacttttgc aggcttaatt tttgttcttg
     8101 cagcatattc tgtgcatcgc gccatgtttt tctgacacta accgattgat atgtaacaat
     8161 cccaccttca ctcgtgtctc gttcattttc ccagacagca atctcgatgt ttcctgaacg
     8221 aagaactttt tgtggttgtg gcatgcattc ctcctaacgc acagggctat ataagcgctg
     8281 cgcgcatatg ccgtgtccga gacactttct ttttttaaag atttgtgaga tttcgttgaa
     8341 gaattttcag aaataccact agttcaggat aaaaaaagtt ttataggggt ctattttgct
     8401 cttgaggatc tgaaaatgaa tgtatctctc aaaaatgtct ggaaaaatac attgtatagg
     8461 aattcattgt tcattattct gagttctgtg gtcaccggca tcttcgggtt tgttttctgg
     8521 acgtttgccg cgcgaaatta tagttcgcag gaagtgggtc ttgcaacgac tgttattagt
     8581 atactcggtc tgttgtccaa tctctcattg ttagggttta atattgcgct tcttaggtat
     8641 tctaaaaaag ataatgggaa gttaaacttc tccgcagttt ttgtttcgat agttgcaagt
     8701 atcattcttg cgggaatatt tgtaataggg gtgcagtatt tcttgcctgc agtaggtttt
     8761 ctgggtgaga acctctggta cgccagcgcg tttatcattt ttacggtcat aaacagccta
     8821 tatcttattt ccaattctat ctttattgct gaggggaagg gctatttggt gttaatgaaa
     8881 gaaagtctct ttagtgtcac aaaggtcgcg tgcatccttt tcctttctgg ggtcactggg
     8941 ctgctggtgt catggaatgc gggaattgcg ttaggcgttc ttttctcttt ttttttcata
     9001 aagatgcata tcggatttga tctgcgccag ctcaaggaga tagggggctt tacattttac
     9061 aattactggg ggcatatctt caacatgtta cccaccctgc ttcttccctt gattataact
     9121 ccattccttg ggccgtcctc tacggcatac ttctatatct catggatgat tgccaatggg
     9181 ttgttcattg tggcgaatgc aacatcgaca aatttccttt ctgaagcatc aaaaaagagc
     9241 aatcagtgga agaagaaatt ggaccatgct cttatttttt caggcatggg gcttctaata
     9301 gggactggcg ccatcctgct ttttggtcac ctcattcttt ctttgtttag tccggaatac
     9361 cttgcaggct atactcttct gcaggtcctc gcagtttctt caattcccta tggagcccgg
     9421 acactctatg tttcgttcct caacttgaga aataatgcga gagagggggc agcagttaat
     9481 tttttagtgt tttttgtgac aatccttggc tcagttttgt tcatggagta tggcttaatt
     9541 gttataggga tcagctggaa cgtagcaaat ctagctggat tagcccttgg aatggtactc
     9601 aaacaacttg agaagaccca ttagtatgtg gttttagtct ctgatgcacc ttagatatgg
     9661 ggctcaaaag actttgtgta actccaataa ttaccgccaa aaatacgaga tattaagaaa
     9721 taaggagcat tttgggcgta ttttaaccaa ccaaggggta gtgtgccact tcagagtaag
     9781 gacaaacagt aagccttata
//
LOCUS       DATDZU010000024         6418 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2384797, whole genome shotgun sequence.
ACCESSION   DATDZU010000024 DATDZU010000000
VERSION     DATDZU010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6418
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2384797"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..991
                     /locus_tag="VJJ79_00815"
     CDS             215..991
                     /locus_tag="VJJ79_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22297.1"
                     /translation="MVKPKEFYAENYADALAFCEAGGMRGLYMPEVAQARIVGEAPWN
                     KLSDSLSFRVTGKRKGEPFVLYVHTEHPLTTADGVRTAMKEGFVNGALRFPQDAFEQL
                     LEHDGEKYPDGTYLVKMVGYDKLKKSLSGVISVDDALEHPQTVPFLGSEERAEQYLKK
                     FRNVHGQNIGIWHCEDLIDNGPLARPLVVGGGYDVGLLGFSDDARLFGVPRATASAGA
                     EGASEKIFSLSLEERLKRLKPFVAEVALKDFEQVYLELHK"
     gene            1148..2371
                     /locus_tag="VJJ79_00820"
     CDS             1148..2371
                     /locus_tag="VJJ79_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HLC22298.1"
                     /translation="MSRERQKGYTARPLVVGNNYNNGLNGNNNYNNNARLFGITQVHT
                     RNVFMKTYKNLWQGLCSYENLEKAFEKARKGKTFKPYVVQFEKDLDKNLNQLRIELLF
                     HAYSPRSLKTFIIHDPKTRKISKSDFRDRVIHHALCNIIEPIFESHFIYDSYANRIGK
                     GTLKALERFDYFKRKVFNKRTQEGYVLKADIKHYFDEVDRTVLLEIIKDKIGDPKVLW
                     LIKKILLNYKSKNNKGMPLGNLTSQFFANVYLNELDHFVKHGLKVKYYLRYVDDFVIL
                     HRNRGVLSEYKIAINVFLREKLSLELHPEKSKLISIKEGITFLGFRVFYYHKLLKKAN
                     IIKMAGKIERFKLLYDDGCIDYDTIYVSMQGWMGYAKYGNTFNLRRKIIQKIESYFPK
                     EISTVEMNRYLRNAS"
     gene            complement(2427..2825)
                     /gene="pfdA"
                     /locus_tag="VJJ79_00825"
     CDS             complement(2427..2825)
                     /gene="pfdA"
                     /locus_tag="VJJ79_00825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit alpha"
                     /protein_id="HLC22299.1"
                     /translation="MSDDTALQQQEMQEVQQTLLHMQQQLQLLAHQLQELEQVKEAIV
                     SMKHTKEGDEILVSLGGGVYTKAKVQVPGTVIMNVGAHVVVEKSTKDAEALVHAQIAE
                     LENIQKDMGQEFAHMSQQMQMLQLTQGKEE"
     gene            complement(2822..3214)
                     /locus_tag="VJJ79_00830"
     CDS             complement(2822..3214)
                     /locus_tag="VJJ79_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015733086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14e"
                     /protein_id="HLC22300.1"
                     /translation="MLETGRVCMKIAGRDAGKVAVIIDVLDETYVMIDGAVRRRKCNI
                     KHLEPMDKMVKVMKNASHADVLKALDMKEEKGKKKEKREKGPRPTRQKVVKKKTSQPA
                     KEAKKEEKKPEQKKEATKKPRKKASTKA"
     gene            complement(3288..3545)
                     /locus_tag="VJJ79_00835"
     CDS             complement(3288..3545)
                     /locus_tag="VJJ79_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004593898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34e"
                     /protein_id="HLC22301.1"
                     /translation="MPKHKTRTFRKVRVKLASRVTIQYRKRNPAHAQCGNCGKNLQGV
                     PRARPVELRTMPKTKKRPERPYGGVLCSGCMRALMIEKARL"
     gene            3701..3919
                     /locus_tag="VJJ79_00840"
     CDS             3701..3919
                     /locus_tag="VJJ79_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22302.1"
                     /translation="MTTIQLEKSVVEEMKEVREYPKQTYNELLKQMIHLFKAVKKKNQ
                     YDEFLHKIQQAKMKELWDNKEDEVWENV"
     gene            3912..4223
                     /locus_tag="VJJ79_00845"
     CDS             3912..4223
                     /locus_tag="VJJ79_00845"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HLC22303.1"
                     /translation="MSKAGDVVLAKIQFIDSFEIKTRPALVIFEEFDNIIVAGITSNT
                     EMKGISLSRKEGMVKESVIKLNYIFTVARPMIKKTLFQLSKEKKKLVRDAFVSKLKDL
                     A"
     gene            complement(4230..4676)
                     /locus_tag="VJJ79_00850"
     CDS             complement(4230..4676)
                     /locus_tag="VJJ79_00850"
                     /inference="COORDINATES: protein motif:HMM:NF014061.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EMC3/TMCO1 family protein"
                     /protein_id="HLC22304.1"
                     /translation="MSFTAFLDPILGPLMNSMPAPYNLLLISFILTGIITLAYKFFTD
                     QKLMKEIKEEQKVLQKEMKEFKDHPDKFMELQKKALEKTITTFKESLKPTLITFIPII
                     IIFGWLKTYYTSLGNPSVLFGLSWIWVYIIFSILLSITLRKLLKIY"
     gene            complement(4710..6113)
                     /gene="secY"
                     /locus_tag="VJJ79_00855"
     CDS             complement(4710..6113)
                     /gene="secY"
                     /locus_tag="VJJ79_00855"
                     /inference="COORDINATES: protein motif:HMM:NF006341.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLC22305.1"
                     /translation="MSFLDSLINNLPEVKGPLQRRLSFKEKLTWTGIVLVFFFLLGIV
                     PLYGLGENSLEQFEFLSVILGASFGSLISLGIGPLVTASIVLQLLNGSGIMNFDLTTP
                     EGKRRFQGMQKLFALFFIIFEASIYVLMGGLTPSRLLDPTQFRTMELVLIGQLIVGGI
                     FIMFMDEIVSKWGFGSGISLFIAAGVSSQIVVRAFSPLTTAGTWAFGSSQAAIGKVWV
                     LFQSLANQNPIGAALALSTILATIFIFLVVVYVQGMKVEIPLSFGRIRGHGIRWPLNF
                     LYTSNIPVILIAALLANIQLWAHLLENWGYPLLGTFSGPTPISGFVLWSSPQNLVELA
                     ITGTLTWNVIGYSLVYTSLMIGGAILFGLFWVQTSGMDAKAQARNMIASGLQIPGFRR
                     DERVLESVLKRYIFPLTVMGGAVVGILAASADLLGTLSNGTSILLTVMIIYRLYEDIA
                     NHHLMDMNPALAKLFQK"
     gene            complement(6125..>6418)
                     /locus_tag="VJJ79_00860"
     CDS             complement(6125..>6418)
                     /locus_tag="VJJ79_00860"
                     /inference="COORDINATES: protein motif:HMM:NF013024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uL15m family ribosomal protein"
                     /protein_id="HLC22306.1"
                     /translation="ADTKKPTIINLYGNAYFGRHGFIVPHRKHVEAINLKDLDVLIKY
                     HGLKGDVNLTTLGYGKLLATGTLSQPMKITVAHASKQAIEKVKSAGGDVILSA"
BASE COUNT         1917 a         1285 c         1372 g         1844 t
ORIGIN      
        1 acatccggcc ttcttccaaa tccttcattg tatcgcggcg caatctctct atcctgtgca
       61 cactcgaaga ttctttcttg aacgtccttg cgagagtacc aactgaggaa tttgtctggc
      121 atatggtaaa aggtacaaag aaaatattta aggatttaga gagacgttca gcgaaaggat
      181 tataaatgag ctattttact aaaaaagtgt aaaaatggta aaaccaaaag aattttacgc
      241 agaaaattat gctgacgcgt tggcattttg tgaagctggt ggtatgcgtg gattgtacat
      301 gcccgaagta gcacaagctc ggattgttgg tgaggctcct tggaataaat tatctgatag
      361 tcttagtttc cgtgtgacag ggaagagaaa gggagaacca tttgtgttat acgttcatac
      421 agagcatcct ctcacaacag cagacggcgt gagaaccgca atgaaggaag gttttgtaaa
      481 tggtgccctt cgttttcctc aggatgcctt tgagcagctg cttgagcacg atggtgaaaa
      541 atatcctgat ggcacgtatc tcgtgaaaat ggtgggttat gacaaattga agaaatcttt
      601 atctggtgtg atttctgtcg atgacgcctt ggaacatccg caaaccgtgc cttttctcgg
      661 aagtgaagaa agagcggaac agtaccttaa aaagtttaga aatgtgcatg gtcaaaatat
      721 cggcatctgg cattgtgagg atcttatcga taatggacca ctcgcgcgcc ctttggttgt
      781 cggcggcggc tacgacgttg gtcttctcgg cttcagtgac gatgcgcgcc tcttcggggt
      841 accgcgagcg acagcgagcg caggcgccga aggcgcctca gaaaaaattt tttcgctcag
      901 tcttgaagaa agattaaaga gattgaaacc ttttgttgca gaagtagcac tcaaagattt
      961 cgagcaagta tatctcgaat tgcacaaata aatataatct tctttttctt ttttatcttt
     1021 gtcctagtat tatccgtttc ttttaattcg gtcgtgtgct tgggctacac gctcttttgt
     1081 cacggcttgt aaaagtcata aaatacagct acgacactga gtagctcgtc gaaatcgtga
     1141 agtagcagtg tcaagggaaa ggcaaaaggg ctacacggcg cgccctttgg ttgtcggcaa
     1201 caactacaac aatggtctta acggcaacaa caactacaat aacaatgcgc gcctcttcgg
     1261 aataacccaa gtacatacta ggaatgtatt catgaagacc tacaagaatc tctggcaagg
     1321 gctctgcagc tacgaaaatc ttgaaaaagc ttttgagaaa gcaaggaaag gcaaaacctt
     1381 caagccatac gtcgttcagt ttgagaaaga tctagataaa aatctcaatc aattgcgaat
     1441 cgaactcttg tttcatgcgt attctccaag gtcattaaaa acatttatta tccatgatcc
     1501 taaaaccaga aagattagca aatcagattt tagggataga gttatacacc atgcgctctg
     1561 caatattatc gagcctattt ttgagagtca ttttatttat gactcatatg caaataggat
     1621 cggaaaagga acactaaagg cattagaacg ttttgattat ttcaaacgaa aagttttcaa
     1681 caaaagaaca caagaaggat atgtcctaaa ggcagacata aaacattatt tcgatgaggt
     1741 cgaccgcaca gttcttttag aaatcataaa agataaaatt ggggatccaa aagtgctatg
     1801 gcttattaaa aagattctct tgaattataa gagcaaaaat aacaaaggaa tgcccctagg
     1861 gaatctcaca tcacagttct ttgcgaacgt atatcttaat gagcttgacc attttgtgaa
     1921 gcatggactc aaagtaaaat attatctgcg gtatgtcgat gactttgtga tactgcatag
     1981 gaacagaggc gtgctttcgg aatataagat agcaattaat gtatttctca gagaaaagtt
     2041 atcgttagag ctgcatccag agaaatcaaa gctaatttcg ataaaagaag gaataacgtt
     2101 tttaggtttt agggtgtttt actatcacaa acttttgaag aaagcaaaca taataaaaat
     2161 ggcaggaaaa atagagcgtt ttaaattatt gtatgatgat ggctgtatcg attatgatac
     2221 gatctatgtg agcatgcagg ggtggatggg gtacgcaaaa tacggaaata cattcaatct
     2281 aaggagaaag ataatccaaa aaatagagag ctatttcccc aaggaaatat cgactgtaga
     2341 aatgaacagg tacctaagaa atgcttctta atggttctaa aaaagttcaa atgagttttt
     2401 ataaaaccac aaagtcatag aaaagtttat tcttctttcc cttgcgtcaa ctgcagcatc
     2461 tgcatctgct gggacatgtg cgcaaactct tgccccatgt ctttttgaat gttctctagc
     2521 tctgcaattt gtgcatgcac taacgcttct gcatctttag tgcttttttc caccactaca
     2581 tgtgctccaa cgttcatgat aacggttcca ggcacttgta cctttgcttt agtgtacacg
     2641 ccaccaccaa gtgacacaag aatttcatcc ccttctttcg tgtgcttcat ggacacgatt
     2701 gcctccttga cttgctcaag ttcttgaagc tggtgcgcaa gaagctggag ttgttgttgc
     2761 atatgaagaa gcgtttgttg tacttcttgc atttcctgtt gctggagggc ggtatcgtca
     2821 ctcatgcttt tgtgctcgct ttctttcgcg gcttcttcgt cgcttctttt ttttgctcag
     2881 gctttttttc ttctttcttt gcttccttcg caggttgaga agtctttttc tttacaactt
     2941 tttgtcgtgt cggccgtggg cctttctctc ttttctcttt cttttttcct ttttcttctt
     3001 tcatgtcgag cgctttgaga acatctgcat gggaagcatt cttcataact ttcaccatct
     3061 tgtccattgg ctcgaggtgt ttgatgttac acttccgtct ccggactgca ccatcgatca
     3121 tgacataggt ctcatcaaga acatcaatga ttactgcaac ttttccggcg tccctgccgg
     3181 caattttcat acaaacgcgt ccagtttcaa gcatggttcg gtactccttt ttgttttatc
     3241 cgtccccatg tcaccatgag gaactcttct gccacaaaaa gagcttttta taagcgtgct
     3301 ttttcaatca tcagggcacg catacatcct gagcacaaga caccgccata gggtcgttcc
     3361 ggtcgtttct ttgtcttcgg catcgtgcga agttcaactg gtcgcgcgcg tggcacacct
     3421 tggagatttt ttccacagtt gccgcactgt gcatgcgcag ggtttcgttt tctgtattga
     3481 attgttaccc ggcttgcaag tttcacacgt actttcctaa acgttcgtgt cttatgcttt
     3541 ggcatagctg ttgagagaaa aagagagtgt ttataaatgt ttctaggggc ttcggatgat
     3601 ttttagaaat tttctggcaa ggtttattaa tccctcgatt cactcctata gaaatgttta
     3661 tatagctaat tatagttaac tataaaacac tataatgaag atgacaacca tccaacttga
     3721 gaaatctgtt gtagaggaaa tgaaagaagt aagagaatac ccgaagcaaa catataacga
     3781 acttctcaaa cagatgattc acctttttaa ggcagtaaag aaaaagaatc agtatgatga
     3841 gtttctccat aagatccaac aggcaaaaat gaaagaactt tgggataata aagaagatga
     3901 ggtctgggaa aatgtctaaa gccggagatg ttgttcttgc taaaattcaa tttatagata
     3961 gttttgagat taaaacaaga ccagctctcg taatttttga agagtttgat aatatcattg
     4021 ttgcaggaat cacaagtaat accgagatga aagggatttc tctctctagg aaggaaggta
     4081 tggtaaaaga gagtgtaatt aaactaaatt acatatttac agttgctcgg cctatgataa
     4141 aaaaaacctt atttcaatta tctaaggaaa agaaaaaatt ggtcagggat gcgtttgtga
     4201 gcaagttaaa agatcttgcg taatagtttc tagtatatct tcaaaagctt tcttagggta
     4261 atgctcaaga ggatagaaaa aataatataa acccatatcc agctcagacc aaagaggaca
     4321 gagggattac caagactggt ataatacgtc ttaagccacc cgaagataat aataatggga
     4381 ataaaagtaa tcaatgttgg tttgaggctt tccttaaaag tagttatggt tttctctaat
     4441 gctttcttct gcagctccat gaacttgtca ggatggtctt tgaactcttt catttctttc
     4501 tggagaactt tctgttcttc tttgatttct ttcatcaact tctgatcggt aaaaaatttg
     4561 tacgccaatg tgataatgcc agtaagaata aaactaatca agagaaggtt ataaggagcc
     4621 ggcatgctgt tcatcagcgg tccaaggata ggatctaaaa atgcagtaaa actcatagag
     4681 tcagaaagaa atgtttgtct ttataagtat tacttttgga acagtttcgc gagtgcaggg
     4741 ttcatgtcca tcaaatggtg atttgcgata tcctcgtata aacgataaat gatcataaca
     4801 gtgagaagaa tgcttgttcc attgctcagc gtcccgagaa ggtctgcact tgctgcaaga
     4861 ataccgacta ctgcgcctcc cataacagta agcgggaaaa tgtaccgttt gagtacggat
     4921 tctagaacgc gttcgtctct ccggaagcca ggaatctgaa gcccagacgc aatcatgttt
     4981 cgtgcttgtg cttttgcatc catgccagat gtttgcaccc agaagagacc aaagagaatc
     5041 gcaccgccaa tcataagact tgtgtataca agcgaatagc ctatgacatt ccatgttaat
     5101 gttcccgtga tagcaagctc gacaaggttc tgaggagagc tccataggac aaaccccgag
     5161 atgggtgttg gtccagagaa ggttccaagg agaggatagc cccagttctc gaggagatgt
     5221 gcccatagct gaatgtttgc gagcaatgca gcgattaaaa tcacagggat atttgatgtg
     5281 tataagaagt ttagtggcca tctaatccca tgcccacgaa tccgtccaaa agacaacggg
     5341 atctcaactt tcattccttg cacgtacaca acaacaagga agataaagat tgttgcgagg
     5401 attgtcgaga gcgcaagggc agcgccgata gggttttggt ttgcaaggga ctgaaacaag
     5461 acccagactt ttccaatggc agcctgtgag ctcccaaatg cccatgttcc tgcagtcgtg
     5521 agcggactga atgccctgac aacaatttgt gaggaaacac ctgcagcaat gaacaatgaa
     5581 atacctgagc caaagcccca tttgctgacg atttcatcca tgaacataat aaaaatccct
     5641 cctacgataa gctgcccaat aagcactagc tccatcgtgc ggaattgtgt cgggtcgagc
     5701 aatcgcgacg gtgtaagtcc tcccatcagt acgtagatgc ttgcttcaaa gatgataaaa
     5761 aaaagagcaa aaagtttttg catgccctgg aagcgccgtt ttccttcagg cgtcgtcagg
     5821 tcaaagttca tgataccaga cccgttcaat aattggagaa caatagacgc agtgactaga
     5881 ggtccaatac ccaacgagat aagggaacca aagctcgctc caaggataac agaaaggaac
     5941 tcaaactgtt ctagtgagtt ctccccaaga ccgtaaagag gaacaattcc caggagaaaa
     6001 aagaacacca agacaatccc tgtccaggtt aatttttctt taaaagaaag ccgacgctgc
     6061 agcggacctt tcacttcagg cagattattg ataagagagt cgaggaaaga cataaggcat
     6121 ccatttatgc actgagaata acatctcctc ccgcactttt aaccttttcg atagcctgct
     6181 ttgatgcatg ggccaccgta atcttcatag gctgcgagag tgttcctgtt gcgagaagtt
     6241 ttccatatcc tagtgttgta aggttcacat cacccttaag tccatgatat tttataagga
     6301 cgtcgaggtc tttcaagtta attgcttcca catgttttct atgcgggaca ataaatccat
     6361 gcctcccaaa gtacgcgttg ccatagaggt taatgatagt tggctttttt gtatcagc
//
LOCUS       DATDZU010000025         2707 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1629705, whole genome shotgun sequence.
ACCESSION   DATDZU010000025 DATDZU010000000
VERSION     DATDZU010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1629705"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2144)
                     /locus_tag="VJJ79_00865"
     CDS             complement(<1..2144)
                     /locus_tag="VJJ79_00865"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HLC22307.1"
                     /translation="MDQKRLANALSNAEGYAREKQKRAQQQSKKYHPQESISSLLIPV
                     AFLLIIAAVAMILVEPELTGYTVKSVSDESAPRWIHDSRHFTIPANEEWVYDLDTLFY
                     SSRELSYTATATDGIVARTNHNLLTLIPQKGFSGNALLTLFASDGENVARIHVKVNTE
                     DNKGTTEPRAFNAMTGAVTAITGAAVRGACLVINVPGLTILDPANPPNCLDVQVANVF
                     IECGGTTISGDGNPPRNGIGINFNVPAGTPVTATIQNCVIKDLDVGINAAIFGGSGLI
                     NNTFQNNRIGIAYQQNIGGLDVENSFFFRNDIGIRGSVSSVNGLIFMNNFSQNILYGL
                     YLTNANNMNVSNNSFDNNGNGTFFDPSQNSFVEYNNYLLNGYGFFAESTQTFTVKGNI
                     FERNAVGLTFDDTGAPGGSPPSIGNIINYNEFIENTLQIRERGLSGSGNSYYLNYYSD
                     IFSNNLDVQDLSAPFDEGDAGVNYPYTQANGARAEGITFKDNRPDINPCGHRISYKVN
                     LPTPVTCTEGILFTADNLDFDCENRAMNADTTSPSFTLFDINGRNDITIRNCQLNSFG
                     IAIASVDLPSQNLLVQNNIIEGGNIAILVSDGINTPPLITGTRIVNNEINNPSTTAIQ
                     LEAEDTLVQGNQLSGTNVATATGIQVYGGDNYAFVFNAISNFDVGLRNAFTPVTNSFA
                     TLNNFLASITLHAGYALTSGSPSIDFSPNDPN"
     gene            complement(2242..2556)
                     /locus_tag="VJJ79_00870"
     CDS             complement(2242..2556)
                     /locus_tag="VJJ79_00870"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HLC22308.1"
                     /translation="MKKEFHKFVTVISLFELESGIAQSQNPDREKKKIINALKNQTVI
                     VLDEKSASLAGEIDDFLYKEGAPIDPEDCMIAGIAKHYNQPILTRDKHFQRIKDVKVE
                     TY"
BASE COUNT          756 a          558 c          555 g          838 t
ORIGIN      
        1 atattcggat cgttgggact aaaatcgata gagggagatc cggaggttaa agcgtatccc
       61 gcatgaaggg tgatactcgc taagaaatta tttaaggttg cgaacgaatt tgtaactgga
      121 gtaaaagcat tgcgcaaacc cacatcaaaa ttactgattg cattgaatac aaacgcgtaa
      181 ttgtctccac catagacctg gattccagtc gccgtcgcca cattagttcc agatagttgg
      241 ttgccctgaa ctaaggtatc ttcagcttct aattgtatcg cagtagttga cggattgttg
      301 atttcattgt taacaattct cgtccctgta attagtgggg gggtatttat accatcactg
      361 acgagtattg cgatattccc tccctcgatg atattgtttt gcacgagaag attttgtgag
      421 ggtaaatcca cacttgcaat agctattcca aaactgttga gttgacaatt tcttatagta
      481 atatcattcc ttccattgat atcaaagaga gtaaacgaag gggatgttgt gtctgcgttc
      541 attgcgcgat tttcacaatc aaaatcaaga ttatctgccg tgaagaggat gccctcagta
      601 cacgtcacag gagttggcaa gtttactttg taactaatac gatgcccaca gggattgatg
      661 tcagggcggt tatctttgaa tgtgatacct tcagctctgg cgccattggc ttgggtgtaa
      721 ggataattta ccccggcatc tccttcatca aatggagcgc tgagatcttg cacatcgaga
      781 ttgttgctga aaatgtcgct gtaataattg aggtagtaac tgttgccact gcctgataaa
      841 cccctctctc tgatttgaag agtgttctca atgaattcgt tgtaattgat tatgtttcca
      901 atcgaggggg gtgagccgcc cggtgctccc gtatcatcaa aggtaagacc cacagcattt
      961 ctttcaaata tatttccctt aactgtaaac gtttgtgtgc tttctgcaaa gaatccgtag
     1021 ccatttagga ggtagttgtt gtactctaca aatgaatttt gtgaaggatc aaagaaagtt
     1081 ccattaccat tattatcaaa agagttgttg cttacgttca tattatttgc atttgttaag
     1141 tacagtccat acaaaatgtt ttgactgaaa ttattcataa aaatgagtcc attaacggag
     1201 cttacagacc ctcttatccc tatgtcattc ctgaagaaaa aagaattctc aacatcaagg
     1261 ccacctatgt tttgctggta agcgattcca attctattat tctggaatgt gttgtttatt
     1321 agtcctgagc ctccaaagat tgctgcgtta atgcctacat ctaagtcttt gataacgcag
     1381 ttttggattg ttgcggtaac gggagttcct gcaggaacat tgaagttaat tccaataccg
     1441 tttcttggag gatttccatc gcctgaaatt gtagtacctc cgcattcaat aaacacgttt
     1501 gcaacttgca catccaaaca attcggaggg ttagcagggt cgagaatagt aagtccgggg
     1561 acattgatta ccaggcaggc tccacgcact gccgcacctg tgattgcagt tacggctcct
     1621 gtcatggcgt taaacgcgcg tggctcagtt gtacctttgt tgtcctcagt gtttactttg
     1681 acatgaatcc ttgcaacgtt ttcaccatca cttgcgaaaa gggtaagaag tgcattacct
     1741 gaaaaacctt tttgaggaat cagagtaaga agattgtggt tagtacgtgc cacgattcca
     1801 tctgttgccg ttgcagtata acttaattct cttgacgagt aaaaaagagt gtctaaatca
     1861 taaacccatt cttcatttgc aggaatggta aagtgccttg aatcatgaat ccaacgagga
     1921 gcgctttcgt ctgatacgct cttcacagta tagcctgtaa gttctggttc aactaaaatc
     1981 attgcaaccg cagctataat cagaagaaat gcaacgggaa ttaacaaaga agaaatcgac
     2041 tcttgagggt gatatttttt agactgctgc tgcgctctct tttgcttttc tcgagcgtag
     2101 ccctccgcat tagacaacgc atttgcaagt ctcttttgat ccaccgataa ccaccacttc
     2161 ccttggcgca aaacagccat cagggtattt aaatgttgtg tttgacaggg ctctgtaaaa
     2221 aaagagcaag ccgttcaagg attagtacgt ttctacttta acatctttta tcctttgaaa
     2281 atgtttatct cttgtgagaa taggctggtt ataatgtttg gcaatgcccg cgatcataca
     2341 atcttcagga tcaataggtg caccttcctt gtaaagaaaa tcatcaattt cccctgctaa
     2401 agaggcactt ttctcatcaa ggacgatcac ggtctgattt tttaacgcat tgataatttt
     2461 tttcttttcc cgatcagggt tttgagattg cgcaatgcca ctttccaatt caaataagga
     2521 aatgacggta acaaacttgt gaaattcctt tttcatcaag ctctttcatc ttttgaagag
     2581 cggcaggtac tccgtccaaa aaatcaataa caaaagaagt atcaagaatc acgctaacct
     2641 ctttgcaata cgattcaatc ttgcccgaga agcttttctt cgttcacgaa catgctttcg
     2701 taaagct
//
LOCUS       DATDZU010000026         2024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1933030, whole genome shotgun sequence.
ACCESSION   DATDZU010000026 DATDZU010000000
VERSION     DATDZU010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1933030"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1839)
                     /locus_tag="VJJ79_00875"
     CDS             complement(160..1839)
                     /locus_tag="VJJ79_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22309.1"
                     /translation="MVSIFGFELNNVMASVGGIIFMVIMFWVISKFVGSARQAREIQR
                     AGGTFDTILAKVSGIRKTQRGEQKVIKKFTTATPNARTPTGKAAKTVEKAAAADTIVE
                     KQTTEVVETTDAIIADLANTTKTIRQEVKEKLITEESGEKEVAEIEALGKRLQFLDKY
                     SDINKATASYLHEYFQSLASHLKKQLDFEKENTQHYHTFVKHLQQSTQDLVPILNYAR
                     SALRTLLRKENREKRAFKNELRSLNRAVNAKNKELLKEKAKGKNADPQLIFQLERERT
                     LLAKNAAELEIIKTQLVKAHELIDLEINKLKQVLDDARKIAREQKRTAKKIANKRQSL
                     DKRLKNLQTRHNKIQQVIDRFKDASQVHGLVLAMSASIKEYFDFYVQEIKDDVTFLTI
                     VKKVLLDNILLERKMRAFPQLLQSVTESEKAIDEGTAAILTIVSIMYTEDVTGSLREQ
                     AAAMRSASKVLDNEERIDQALGALTEQIEQESLAIMRDLDKLLEREKKRIIENETLHQ
                     EEAQHLGEAMATMINRKVALDETYLKQAVDFGDKLKERNTQAAAAYERARP"
BASE COUNT          478 a          453 c          392 g          701 t
ORIGIN      
        1 gcggcatgta ggaaataaag atttccgaaa atttatcgaa agggttaagc ctaaattagc
       61 gatttccggc catttgcatg aaacagtagg aagtgttgat gccatcggcg aaacaaaact
      121 tgtaaatccc ggctgggatg ggatgatcat tgagttgaat tagggtcttg ccctctcata
      181 tgcggcagcc gcctgggtat tgcgttcttt taatttgtct ccaaagtcaa ctgcttgttt
      241 cagatatgtt tcatccagcg caactttacg gttaatcatt gttgccatgg cctctccaag
      301 atgttgcgct tcttcttgat gcaacgtttc attttcaatg atccgtttct tttccctttc
      361 cagaagtttg tctagatcac gcatgatagc aagagattct tgttcaatct gctcagtcaa
      421 tgcgcccaac gcttgatcaa ttcgctcttc attgtcaaga actttgcttg cgctgcgcat
      481 agccgcagcc tgctcacgta aacttcccgt aacatcttca gtgtacatga tggaaacaat
      541 tgtgagaata gccgcagttc cttcatcaat agctttttcc gattcagtta cgctttgtaa
      601 aagctggggg aaggcgcgca ttttacgttc caacaagatg ttgtcgagaa gaactttctt
      661 cacaatggtc aagaacgtaa catcatcttt gatctcctgc acataaaaat caaaatattc
      721 tttaatgctt gccgacatcg ctagtactaa accatgaact tgactggcat ctttaaatct
      781 gtcaattact tgctggatct tgttgtgtct cgtctgcaaa ttcttcaggc gtttgtctaa
      841 actctggcgt ttattggcga tctttttcgc tgtccgtttc tgctcgcggg ctattttacg
      901 tgcgtcatcc aacacctgtt ttagtttgtt aatttccagg tcgattaatt catgtgcttt
      961 cacgagctgg gttttaatta tttcaagttc tgccgcgttc ttggcaagga gggttctttc
     1021 tctctctaac tgaaagatga gctgggggtc ggcatttttc ccttttgctt tttctttaag
     1081 caattctttg tttttggcat taactgctct gttaagtgac cgcagctcgt tcttgaaagc
     1141 tcttttctcc cggttttcct tacgcagcaa ggttcgcagt gcacttcgtg cataattcaa
     1201 aatcggcacg agatcttgtg ttgattgctg aagatgtttt acaaaagtgt ggtagtgctg
     1261 ggtattttcc ttttcgaaat ccagttgttt tttaagatgg gatgctagcg attggaaata
     1321 ttcatgcaaa taagacgccg tcgctttatt tatgtcgcta tatttgtcga ggaactgcaa
     1381 tcgcttacct aaagcctcga tctctgcaac ttctttttct ccgctctctt ccgtgatcaa
     1441 tttctctttc acttcttggc ggattgtctt cgtggtattt gccaagtctg cgatgatcgc
     1501 gtccgttgtt tctacgacct ctgttgtttg tttttctact atggtatcgg cagctgcggc
     1561 tttctctacg gttttggcag ctttacccgt tggcgttctc gcgtttggtg ttgccgttgt
     1621 gaacttcttt atgacttttt gttctccccg ctgcgttttt ctaattccac tgaccttcgc
     1681 tagaatagta tcaaatgttc cccctgctcg ttgaatctcc ctcgcttgcc tcgctgaacc
     1741 cacaaattta cttattaccc agaacattat gaccataaag atgattccac ctacggaagc
     1801 cataacatta ttgagctcaa agccaaaaat agacaccatc tcaaaaagga acagaattat
     1861 caatataaac tttacttaac aataccaata cttttaaata taattttgat ttccacaaag
     1921 aacatgaaac ttgcaacaag actctttttt cttttcatgg tgcttttcat tgtgtcctgt
     1981 tcttttccat cagaagaaaa aatagaaact aaacctcaag agac
//
LOCUS       DATDZU010000027         8419 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_529956, whole genome shotgun sequence.
ACCESSION   DATDZU010000027 DATDZU010000000
VERSION     DATDZU010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 8419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8419
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529956"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VJJ79_00880"
     CDS             complement(<1..409)
                     /locus_tag="VJJ79_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HLC22310.1"
                     /translation="MEERIKRELTDAALVTQALINRHIADIKHLAEMVLNTYKNGGKV
                     ILFGNGGSAADAQHIAAELVNYQYMPGRPMLNALALTVNTSVLTAIGNDIGYENLFAR
                     QIESLVTEKDIVIAISTSGNSPNVLKGIEAAKAK"
     gene            complement(411..1430)
                     /locus_tag="VJJ79_00885"
     CDS             complement(411..1430)
                     /locus_tag="VJJ79_00885"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHMP kinase"
                     /protein_id="HLC22311.1"
                     /translation="MRITSRAPLRIEFAGGGTDIPSYSDRHNGFVLNATINKYVYATL
                     KPIHTSDVKFIKTETNESLLFKDVKDLVYNGDSDLVKSVIKRMKINYGGEIQLRSDVP
                     PDTGLGNGATTAVTLVGLFNTLRHEKKLSEYELAETAFETMKYELDIQGGKQSFYSSV
                     FGGFNFIEFLENGFTRVNRVRVRRQDVLELEKNLLLIYIGKREKESGSQTILRTQESL
                     YEKNENALLLEKLKEIAWEMRDLLTRGDLPGFAQKMNETFETKKKLYPEITNKKIDDV
                     CDLVKKHGAIATRIQGAGAGGHLITYCEPNKEHTVAKALLEKGITCIPFNFTERGLEV
                     WEGED"
     gene            complement(1464..2351)
                     /locus_tag="VJJ79_00890"
     CDS             complement(1464..2351)
                     /locus_tag="VJJ79_00890"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLC22312.1"
                     /translation="MISIVITAFHEQQIGKAIESITSQNISQEYELIVACPDVETKAI
                     VEKYATTNKLVKHFQDQGKGKSFALNQLFKILAGDILIFTDGDVYLGSNAVNEILWAF
                     KDPKVGCVSGRVISQNPKENMLGYWSHLLADVGAHRIRKRLYEKEKFLECTGYLFAFR
                     NKVIQEIPLDVAEDAMIPYYFHKKGYKIAYAENAIVYVKNPSTFKDWLKQRKRTAGAH
                     EKLTRYEPNFPKVKSFRNEMLHGMGAVWNYPEKSKEYFWTAALIGARLYMWLSLFYDL
                     KIKKQYYQDGWERVETTKA"
     gene            complement(2348..3523)
                     /locus_tag="VJJ79_00895"
     CDS             complement(2348..3523)
                     /locus_tag="VJJ79_00895"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLC22313.1"
                     /translation="MRKLKIGYVLTYFHPFKDGMENNCLYLAREMVKLGHEVHVFTSD
                     KRDNQICTQKEEMYDGIHIHRCKMLWRYKYYLELKPEVITKILKYKDLDILHIHSFGF
                     AMHDIALVLKKALGHKTAIVNTPHGPFMSLNSYPMWQKILRSIFVAIEYPINRLYDGV
                     IQVNTRQWSWIVKSGVKKENIHFVPDGIPEERFRKVDNKEFKKKYNLEGKFVMCNLSR
                     VLKYKGQHQIIKALPSIVKKYPNVVFLQMGKDHGWTEHCLKLAKELGVEEHVRFIGEA
                     SEEDKLSGLDACNIFVLPSEWEAFGIVTLEAMARKKAVISTDCEGGLYLVQPENGLLY
                     PYEDINALQKTVFMLIENPKLREQMAETNYKKAHELTNEKIALKYLEPLYQKLAAAK"
     gene            complement(3564..4892)
                     /locus_tag="VJJ79_00900"
     CDS             complement(3564..4892)
                     /locus_tag="VJJ79_00900"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLC22314.1"
                     /translation="MKHEDIAQYLLKDLKRKGADDVIVQLSSSTNDIVKFSNNKISTT
                     KDWSTTMMSVFVTKDKKIMATSLKTFTEKAAADLATRTLQGLKQLQPNNEYFGIAQGP
                     FKYKKLQEYYDPKVKDMDIEMIDLVKQSLDITKKKVKRAAGILEKNDVENYLLTSNDI
                     EVRENGSWLYFSIRALVNQNASGHQTAVSRIKNKLNVIETAARAAEIAHLANRPRKRI
                     SGTFDVIFEPLAFANIIERIGEGASIFSVESGLSPLKEKLGMQIASPLVTIHDDGTVP
                     NGYASTSFDAEGSPTQKNTLVKNGILKTYLHNTSTAYRYKTKSTGNAGLIAPDPHNIV
                     MEPGTQTKDAIFSSVKNGLYITNVWYTRFQNYSTGDFSTIPRDGAFVIKNGEIKDALK
                     DIRISENLLKVMQNVVMVGKEMRQIKSWEVETPCILPYVLVKNVQITKPE"
     gene            complement(4889..6301)
                     /locus_tag="VJJ79_00905"
     CDS             complement(4889..6301)
                     /locus_tag="VJJ79_00905"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLC22315.1"
                     /translation="MDEGIAERALAYAQKLGAAYIEARLESTTSNAIVIKNGIVQLAS
                     FDYHEGLGMRFIVNKKLGFVSTNELEEKHIQEIIAKAIRITKATKDIGQNTELAKEKS
                     HKATYKVTQKIKLADIGIPERTQLLLDAEKAVKETGVNVPARHLSYGDTDTKEYLITS
                     EGTKILSHIPRMETHYFLTIEENNKVSQRSWSYGASGGWEQAKKWNLPKVFEEEVTTM
                     RTNLLKGKKAPSGKMPIVCGPQVTGIMVHESCGHPYEADRILGREAAQAGESFVTKRM
                     LGTKIASQKVTIVDDPTINNSFGFYRYDNEGVKARRKFLVKKGIITEFLHNRETAYAM
                     GLKSNGSSRAADFDKESIVRMSNTFLLPGDYKEKELFEGVKKGIYMKNFMEWNIDDKR
                     LNQKYTGAEAYLIENGEISTPIIAPVLEVSTLRLWPAVEAIGKNLELHAGSCGKGEPM
                     QGIPIYLGGPSIRLQGLRIK"
     gene            6496..6696
                     /locus_tag="VJJ79_00910"
     CDS             6496..6696
                     /locus_tag="VJJ79_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22316.1"
                     /translation="MSDAKVRIKSIIERLTTETRSIFSEKVFSLAAELGIGESHVKAS
                     LQELVAENFITEPMHGVLRRVP"
     gene            6741..>8419
                     /gene="ppsA"
                     /locus_tag="VJJ79_00915"
     CDS             6741..>8419
                     /gene="ppsA"
                     /locus_tag="VJJ79_00915"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HLC22317.1"
                     /translation="MKVVHIAWFKELSKDSLILAGGKGANLGEMYNLGLPIPPGFVIT
                     TAAYKEYLQQTGIGKQIYEKLAFIDVENTEALQQISKEIQDIIIKTPPSKELQEEIME
                     AYEALSIDPSIKGTKVEDLVKQGRDAPYVAVRSSASAEDLPTASFAGQMATYLNIKGK
                     KKLLAAIIACWASLFTARAIYYRDKNKFKHEKVWIAVIIQKMVDADVAGIIFSANPVS
                     LSKEEVVIEASYGLGEAVVSGSITPDTYIVDKKSLDTKERQLSKKTWMYIRDPQKMET
                     VKVDVPAEKQALPSLSSHELKKLAEFAVLVEQHYKSPQDLEFALERGRIYITQSRPIT
                     TLREKPQLEIQKEKEKEEAGEMDVTDALLLVSGIPASPGVGKGIVVLVHDISDLKKVK
                     KGDVLVARMTTPDFVPTMKRASAIVTDSGGVTAHAAIVSREMGIPCIVGTEIGTQKLK
                     EGMFITVDAAKGKVYQGNVRVAVVKEEPPLFIKTKVQVKVILDLPELAERAAATGADG
                     VGLLRSEFINMQNREHPVSMIHSGKTEEFIFHLVEGLKVICKAFKGKPVWYR"
BASE COUNT         2024 a         1821 c         1793 g         2781 t
ORIGIN      
        1 tctttgcttt tgcagcttca attcctttta acacattcgg tgagtttcct gaggtgctga
       61 ttgcaataac gatatctttt tctgtgacga gcgactctat ctgccgtgcg aaaagatttt
      121 cgtatcctat atcgttgccg attgccgtaa gcacagacgt gttgactgtt aatgcgagcg
      181 cgttgagcat aggccgtcct ggcatgtact ggtagttgac cagctcggct gcaatatgct
      241 gtgcgtctgc agcgcttcct ccgttcccga agaggattac tttgccgcca tttttgtatg
      301 tgttcagtac catttctgcc agatgtttaa tgtccgcgat atgccgattg attagtgctt
      361 gagtaactag tgcagcatct gtgagttctc tcttgatacg ctcttccatg ctaatcttct
      421 ccttcccata cttctagtcc tcgctctgtg aagttaaatg gaatgcatgt gattcctttc
      481 tcaagcaatg cttttgccac tgtgtgttcc ttgtttggct cgcaatacgt aatgagatgg
      541 ccgcccgcgc ctgcgccttg gattcgtgtt gcaattgcac catgcttttt taccagatcg
      601 cagacatcgt cgattttttt gtttgtaatc tccggataca gtttcttttt tgtttcaaat
      661 gtttcgttca tcttttgcgc gaatcctgga aggtcgcctc gtgttagaag gtctctcatc
      721 tcccatgcaa tctctttcaa cttttctaaa aggagcgcat tttcattttt ttcatagaga
      781 gattcctgtg ttctcaaaat agtttgtgac ccgctttctt tctctcgttt tcctatgtag
      841 atcagcaaaa gatttttttc gagctctaat acatcttgtc ttctgacacg tacacggtta
      901 acgcgcgtaa aaccattctc aaggaattct ataaaattaa agccgccgaa aacgcttgag
      961 tagaatgact gttttcctcc ctgaatatcg agctcgtatt tcattgtctc gaacgccgtt
     1021 tcagcgagct catactcgga tagttttttt tcgtgccgga gcgtgttgaa taaacccacc
     1081 aatgttactg ctgtagttgc gccgtttcct aacccagtgt ccggcggcac gtcagatctt
     1141 agctggatct ctccgccata atttatcttc attcgtttaa ttacagattt caccaaatca
     1201 gaatcgccgt tgtatactaa atctttcaca tccttgaaga gaagggattc gttcgtttca
     1261 gttttgataa attttacatc tgacgtatga atcggtttta atgttgcgta cacgtattta
     1321 ttaatcgttg cattcagtac aaaaccatta tgcctgtcag aatacgaggg aatgtctgtt
     1381 cctccacctg caaattctat ccgtagcggt gctctgcttg taatacgcat ggctttggtt
     1441 ctatgattgc ccttttaaaa gacttatgct ttcgtcgtct cgacgcgttc ccatccgtct
     1501 tgataatatt gcttttttat ttttaaatcg taaaaaagtg agagccacat gtacagtctt
     1561 gcgccaatta atgctgcagt ccagaaatat tcttttgatt tttcgggata gttccagaca
     1621 gcgcccatgc catgcagcat ttcgttcctg aatgatttta cttttggaaa atttggttcg
     1681 tagcgcgtga gcttttcatg cgcgcctgct gttctttttc tttgctttaa ccaatcttta
     1741 aacgtgctcg gattcttaac atacactatc gcattttctg cgtatgcaat cttgtatcct
     1801 tttttgtgga aataataggg aatcattgca tcttctgcga catctaacgg aatctcttgt
     1861 atcaccttgt ttctaaatgc aaaaagatat cccgtgcact cgagaaattt ctctttctca
     1921 taaagtcttt ttcttatcct gtgtgcgcca acgtctgcaa ggagatggct ccagtatcca
     1981 agcatgttct cctttggatt ttgtgatatg actcttccag atacacagcc tacttttgga
     2041 tctttaaatg cccaaagaat ttcgttgact gcattgcttc ctaggtacac gtcgccgtca
     2101 gtaaagatta agatatcacc tgcaagaatt ttaaacaact ggttaagcgc aaaacttttt
     2161 ccttttcctt gatcctggaa atgctttact agtttgtttg ttgtagcata cttctcgacg
     2221 atggcctttg tttctacatc agggcatgca acaataagtt catactcttg agaaatattt
     2281 tgagacgtga tactctcgat tgcttttcct atctgctgtt catggaatgc ggtaatgaca
     2341 atggatatca ttttgctgca gcgagttttt ggtacaatgg ttcaagatac tttagtgcaa
     2401 tcttttcgtt cgttaactca tgtgcttttt tgtagttcgt ctctgccatc tgttctcgga
     2461 gctttggatt ttctatcagc atgaacactg ttttttgcaa tgcattaata tcctcatagg
     2521 ggtacagtaa tccgttctct ggttgtacca aataaagacc gccttcacag tctgttgaaa
     2581 taactgcttt ctttcgcgcc attgcttcga gcgtgacgat gccaaacgct tcccattcgc
     2641 ttggtaagac gaaaatgttg catgcgtcta acccgcttaa tttatcctcc tcagatgctt
     2701 cgccgatgaa gcgtacgtgt tcttcaacac caagttcttt tgcaagcttg aggcaatgtt
     2761 cagtccagcc gtggtccttc cccatctgca ggaaaacaac atttggatat ttcttgacaa
     2821 tgctgggcaa tgcttttatt atttggtgct ggcctttata ttttagaacg cgacttagat
     2881 tgcacatgac aaattttcct tcgaggttat attttttctt gaactctttg ttatcgactt
     2941 ttctaaaccg ttcttctggg ataccatcag ggacgaaatg aatattttct ttttttacgc
     3001 ctgacttcac aatccatgac cattgtctgg tgttgacctg aatgacaccg tcgtacaacc
     3061 tgttgatagg atattctatt gctacgaaga tggagcggag aatcttttgc cacatcggat
     3121 agctatttaa tgacatgaac gggccgtgcg gtgtgttgac tatcgccgtc ttgtgtccca
     3181 gcgctttttt tagaactaat gcaatatcgt gcatagcaaa accaaagcta tggatgtgta
     3241 gaatatctag gtctttatat ttcaatattt tcgtgatcac ttctggtttt agttcgaggt
     3301 aatatttgta gcgccagagc atcttgcagc ggtgaatgtg aatgccatcg tacatttctt
     3361 ccttctgtgt acatatctga ttgtcgcgct tatccgacgt aaacacgtgg acttcgtgcc
     3421 cgagctttac catttctctc gcgaggtaca agcaattatt ctccatgccg tccttaaatg
     3481 gatggaaata agtgagaaca taccctatct ttaattttcg catgccacga aaccgtctct
     3541 tttgttttat aagatttatg gactcattcc ggcttcgtta tctgcacgtt tttcacgaga
     3601 acatatggga gaatacatgg tgtttcgact tcccaacttt ttatttgccg catttctttt
     3661 ccgaccatca ccacgttttg catgaccttg agcaggttct cagagatccg aatatctttc
     3721 agcgcatcct tgatttcgcc gttcttgatg acgaatgcgc catccctcgg aatcgtggaa
     3781 aagtcgcccg tgctgtagtt ctggaatcgc gtgtaccata cgtttgtgat atacaatccg
     3841 ttttttactg aagaaaatat tgcatctttt gtttgtgtcc ctggctccat cacaatgtta
     3901 tgcggatcag gtgcaattag tcctgcgttg ccagtacttt tcgttttgta acggtacgcc
     3961 gttgaagtgt tatgtaagta tgtttttaag atgccgttct tgacgagggt gtttttttgt
     4021 gttggagacc cttctgcgtc aaatgatgtt gatgcgtagc cgttgggcac ggtgccgtcg
     4081 tcgtggatcg tcactaatgg gcttgcgatt tgcattccta gtttttcttt taacggcgaa
     4141 agtcctgact ccacagaaaa aatggatgct ccttctccaa ttcgttcgat gatgtttgca
     4201 aatgcaagcg gttcaaaaat cacgtcaaaa gtgccactaa ttcgttttcg tggacggttt
     4261 gctaagtgtg caatctctgc cgcgcgcgct gctgtttcta tgacattgag tttgtttttt
     4321 atccgcgaga ctgcagtttg gtgcccagat gcattctgat tgacaagtgc gcgaattgaa
     4381 aagtagagcc agctgccatt ttctcgtact tcgatatcgt ttgatgtcag caagtagttt
     4441 tcgacgtcat ttttttcaag aatccctgcg gcacgtttta cctttttctt agtaatgtct
     4501 agactttgct tgacaaggtc gatcatttct atgtccatgt ctttaacttt tggatcataa
     4561 tattcttgca attttttata tttgaatggt ccctgtgcaa tcccaaagta ttcgttattt
     4621 ggttgcagct gtttgagacc ttgcaatgtg cgcgtggcaa gatctgccgc cgctttttct
     4681 gtaaacgttt tcaaggacgt tgccataatc tttttgtcct ttgtaacaaa caccgacatc
     4741 attgtcgtcg accagtcttt tgtcgtgcta atcttgttgt tgctgaactt gacaatgtcg
     4801 ttcgtgcttg aggagagctg gacgatcacg tcatccgcgc cttttcgttt caggtctttc
     4861 aatagatact gggcaatgtc ttcgtgtttc attttattct gagtccttgt aatctgatag
     4921 atggaccgcc aagatagatg ggaattcctt gcattggttc tccttttccg cagcttcctg
     4981 catgcagctc cagatttttt cctatagcct cgaccgcggg ccagagcctt aacgtggata
     5041 cttccaaaac aggagcaata attggcgtgg aaatttctcc gttctcgatt aaatacgctt
     5101 ctgcgccagt gtatttttgg tttaggcgct tgtcgtcaat attccattcc atgaaatttt
     5161 tcatataaat tcctttcttg acgccttcaa ataattcttt ttctttatag tctccaggca
     5221 aaaggaatgt gttggacatc cgaactatgc tttccttgtc aaaatctgcc gcgcgggaac
     5281 tgccgttgct tttcaggccc atagcatatg ctgtttccct gttgtgcagg aactcggtga
     5341 tgataccttt cttgacgaga aactttcgcc gagctttgac gccttcatta tcataacgat
     5401 aaaaaccaaa gctgttgttg atagtcgggt cgtcgacaat ggtgactttt tgagaggcaa
     5461 tctttgtgcc gagcattctt tttgtcacga atgattctcc tgcctgtgct gcttctcgtc
     5521 caagaattct atcagcttca tacggatggc cgcagctttc gtgcaccatg atgccagtta
     5581 cttgcggacc gcagacgata ggcatttttc cactcggcgc cttttttcct ttcaaaagat
     5641 tcgtgcgcat ggtcgtgact tcttcctcga aaactttagg aagattccat ttctttgcct
     5701 gctcccagcc gcccgatgca ccataggacc aggaacgctg cgagacttta ttgttctctt
     5761 caatcgtcag aaaataatgt gtttccatgc gagggatatg ggaaagaatt tttgtgccct
     5821 ctgacgtgat caggtactct ttcgtgtccg tgtctccgta gctgaggtgt ctcgccggga
     5881 cgttaacacc tgtttctttc actgcttttt ctgcatctaa aagtaattgt gtacgttccg
     5941 gtatcccgat atctgcaagc ttgatctttt gcgtgacttt gtacgttgcc ttatgtgatt
     6001 tttcttttgc tagctccgta ttctgcccga tatcttttgt tgccttggta attctgattg
     6061 cttttgcaat aatctcttga atatgttttt cttctagctc gttggtagac acaaagccaa
     6121 gttttttgtt cactatgaaa cgcatgccca gaccttcatg atagtcaaag cttgcaagct
     6181 gcacaattcc attttttatc actatggcgt tgcttgtcgt tgattccagc cgagcttcta
     6241 tgtatgctgc gccaagcttt tgcgcgtatg caagtgcccg ttctgcaatc ccctcgtcca
     6301 ttgaacattg aagaactatt acacggctta aataccttgt gtccctcgtg ttgtcactct
     6361 caaaacaatt catttaaaag ctttcatctc ttctaaaaaa catatcttag aatatatatt
     6421 ttactctata aagatatata aacggtctgc gtttacagac gttctattca tgtggaaatt
     6481 ttggggtgac tagtgttgtc tgatgcgaag gtgcggatca agagtatcat tgagcgttta
     6541 acgacggaaa cacgttctat tttttcagaa aaagtatttt ccttagctgc tgaacttggc
     6601 attggtgagt cgcatgtaaa agcttcctta caagagctcg ttgcagagaa ttttatcacc
     6661 gaaccgatgc acggtgtatt gcgccgcgtt ccataaaaac atttatatag tctatttctt
     6721 ctcttttaaa ttagaggtga ttgaaagtag ttcatattgc atggtttaaa gagctgagta
     6781 aagattctct cattcttgca ggtggtaaag gagcaaacct tggagaaatg tataatctcg
     6841 ggttaccgat tcctcccggt tttgtgataa cgactgcagc ctataaggaa tatctgcaac
     6901 aaactggcat aggaaaacag atttacgaaa agcttgcgtt catcgacgtg gaaaatacag
     6961 aagcattgca gcaaatatct aaagaaattc aggatattat tattaagaca ccaccttcca
     7021 aagaattaca ggaagaaatc atggaagcgt atgaagctct ttctattgat ccttcaatca
     7081 aaggaacaaa agtggaagat ctcgttaagc aaggacgaga tgctccttat gtggctgtgc
     7141 ggagttctgc atctgctgaa gatcttccta cagcttcttt tgcaggacag atggcgacgt
     7201 atctcaatat caaaggcaag aaaaagttac tcgcagcaat catagcgtgc tgggcttcgc
     7261 tcttcactgc acgtgccatc tactatcgcg ataaaaataa attcaagcat gaaaaagtgt
     7321 ggattgcagt tattatccaa aagatggtgg acgcagatgt cgcagggatt attttttctg
     7381 caaatcctgt tagtctcagc aaagaagaag ttgtgattga ggcgtcatat ggtcttggag
     7441 aagccgtcgt gtcaggttca atcacgcccg atacatatat tgttgataag aaaagccttg
     7501 acacaaagga acggcagttg tcaaaaaaaa cgtggatgta tattcgtgat ccgcagaaga
     7561 tggagacggt taaagtcgat gtgccagcag aaaaacaagc tcttccctca ctttcttctc
     7621 atgaacttaa aaagttggca gagtttgctg tgctagttga gcaacattac aagagtcctc
     7681 aggatttgga gtttgccctc gaacggggaa gaatttatat cacgcagtct cgtcccatca
     7741 cgacgctcag agaaaagccg cagcttgaga tacaaaaaga aaaggaaaaa gaagaagcgg
     7801 gggagatgga tgttacggat gcacttcttc ttgtttctgg tatccctgca tcccctggcg
     7861 ttggcaaagg aatcgttgtt cttgtgcatg acataagtga tcttaagaaa gtgaagaagg
     7921 gggatgtgct tgttgcacga atgactacgc ctgacttcgt tccgacgatg aaacgggcaa
     7981 gtgctattgt cacggattct gggggcgtga cagctcacgc agcgatcgtt tctcgggaaa
     8041 tggggattcc ctgtatagtt ggaacagaga ttggaacaca aaaattgaaa gaaggaatgt
     8101 tcattactgt ggatgcagca aaggggaaag tgtatcaagg aaacgtgcgc gttgctgttg
     8161 taaaagaaga gccccccctt ttcattaaaa caaaggtgca agtgaaagta atccttgatc
     8221 ttcccgagct tgcagagcgc gcagctgcaa caggcgcaga tggtgtcggg cttttgcgga
     8281 gcgagttcat taacatgcag aaccgcgagc atcctgtgtc catgattcat tctgggaaaa
     8341 cggaggagtt catattccat cttgtcgagg gactgaaagt gatttgcaaa gcgttcaaag
     8401 gaaagcctgt gtggtaccg
//
LOCUS       DATDZU010000028         4047 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2240143, whole genome shotgun sequence.
ACCESSION   DATDZU010000028 DATDZU010000000
VERSION     DATDZU010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240143"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VJJ79_00920"
     CDS             <1..449
                     /locus_tag="VJJ79_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLC22318.1"
                     /translation="EIITKENIRIKKKGKELSFNLVDTPGIATKIDYEDFLKHKMNKA
                     IAKERAKEATKGVIESIRWLDNMDCVVVVLDSTSNPYSQVNITIIGNLAARDIPVVIA
                     ANKIDLRKSNVKKIESAFPQYPVVGISAEIGNNVDELYDMLFKVVK"
     gene            453..842
                     /locus_tag="VJJ79_00925"
     CDS             453..842
                     /locus_tag="VJJ79_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2073 domain-containing protein"
                     /protein_id="HLC22319.1"
                     /translation="MLTLQYIPFSEVENLSSEKRIAKLLGSVKRNNIVLMQGRLHATE
                     EAQLIEKTMEEVTKDFKGIELCTIYPQKPKRKGDVGEHIKHYLAKVLVGDRDGFTIIG
                     PATIIKEIKKNPDKIELLTHNLRRKER"
     gene            843..1223
                     /locus_tag="VJJ79_00930"
     CDS             843..1223
                     /locus_tag="VJJ79_00930"
                     /inference="COORDINATES: protein motif:HMM:NF021372.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon containing protein"
                     /protein_id="HLC22320.1"
                     /translation="MPHQCVRCGELYPTGCKELLNGCDCGGRFFFFVKDELVEKAQEV
                     TQNLTTEEKVQIEKDVFDMVGETDDNQPVILDFESIKVKGPGQYEIDLVDLFKGNPLV
                     YKLAEGKYIIDIPSTFSSEKKKRK"
     gene            complement(1299..2798)
                     /locus_tag="VJJ79_00935"
     CDS             complement(1299..2798)
                     /locus_tag="VJJ79_00935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22321.1"
                     /translation="MSQESSLENEVEQLVQSPLMPYTSGIDGFTVHSKCPYAADGIRG
                     LIHAIEAIGRYDQRALNVAAPQDLVLITGNTYDKDYVQWLHDVGLGTHPDNVVLLPED
                     GNIPLADRLLGDDRLLKQVEARVHNHCDAVGMHGTWHPFWYSSKEREVAETLELDYFG
                     SETEKIQKFNDKAYFKEMCRAIGVPVIDGVTVSRKLGDDISVHYLQYANALLEGLTKF
                     CGRVFIRGNISAAGNSKKICTLHGGEDSASFNETLEWMLSDTEMTAFLVERDCSPHKS
                     PSAMFRILSDGTIYRLSPVGRQILLNREHQGNCYPLNGSPHVERELVEMGVRIALEKR
                     KRGYVGDFGIDFIESQSGLLYPVEENPRNTGQSALAHFYVQMLHQETDHIFDDLRFSR
                     RELSLFPDALVQKIYNGDIKPRLHMQTVNVKTSANSFKELHELLGDILYVPGRSWGVV
                     PMNIGPLRYTGKFSLVTFAKSEYDFHGVTLLAAARVGVKNVDVLRQLFL"
     gene            2925..>4047
                     /locus_tag="VJJ79_00940"
     CDS             2925..>4047
                     /locus_tag="VJJ79_00940"
                     /inference="COORDINATES: protein motif:HMM:NF018444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLC22322.1"
                     /translation="MDFFFPHDQYRKIQESFMKQVYAVIQNKGQLLAHAPTGIGKTAS
                     ALSPALTYVLKQDPKKMIFFLTSRNTQHLIAVETLKKIKTKYPTNFVTVDLIGKKGMC
                     NQPGAELMSSGEFIEYCKGLREKDECPFFNNLRQKGKISAEAQNVLQKLKQESPLHVE
                     EINSTCFHADLCSYETACLLGKDAQVVIADYNYILNPHIRESLFKRINKTLSDCIIIF
                     DEGHNVPNRARDLLTGTLSTFILENAAKETQAFGFEEIANDILAIKVLVEKLVKEKIS
                     EDKEEIVVKKDEFFKRVEAIGNYEEIKGNFDFVGEQVLEKKKRSFTASVAAFMDQWLG
                     PDEGFTRILSKKISKIGKPVLLLQYRCLDPALVMRPILQE"
BASE COUNT         1326 a          890 c          854 g          977 t
ORIGIN      
        1 gggaaattat tacgaaagaa aatatccgta tcaagaaaaa aggaaaagag ctgtcattca
       61 accttgtcga tacgccgggg attgcaacaa aaatcgatta tgaggacttc ctcaagcaca
      121 aaatgaacaa ggcaatagca aaagaacgtg caaaggaagc gacaaaggga gtcattgaat
      181 caatcagatg gcttgacaat atggactgtg tcgtcgtcgt tctggactca acctcaaacc
      241 catattcaca agtcaatatc actatcattg gcaaccttgc agcacgagac attccagtcg
      301 tcattgccgc aaacaaaatt gatcttcgaa agtcaaacgt gaaaaaaata gaatctgcat
      361 tcccccagta ccctgtcgtt ggcatctctg cagagatagg caacaacgtc gacgaactgt
      421 acgacatgct cttcaaggtg gtcaagtaaa caatgttaac actgcaatac attccatttt
      481 ctgaggtaga gaacctttct tctgagaagc ggatagcaaa gctactcggc agcgtaaaac
      541 gaaataatat tgtgctgatg caggggcgcc ttcatgcaac ggaagaagcg cagttgatag
      601 aaaaaacaat ggaagaagtc accaaggatt tcaaaggaat tgaactctgc acgatttacc
      661 cacagaagcc aaagagaaaa ggcgacgtgg gtgagcatat caagcattac cttgcaaaag
      721 tgcttgtcgg agacagggat ggattcacaa ttataggtcc tgcaaccatc atcaaggaaa
      781 tcaagaaaaa ccctgacaag atcgagcttc taacgcataa cctccgacga aaggagagat
      841 aaatgcccca ccaatgtgtt cgctgtggag aactgtaccc gacaggatgc aaagagttgc
      901 tgaatggatg tgactgtggt ggtcgtttct ttttctttgt aaaagacgag ctcgtcgaga
      961 aagcacagga agtgacacag aatctcacga cagaagaaaa ggtacagatt gaaaaagatg
     1021 tgtttgacat ggttggagaa actgatgata atcaaccagt cattttagat tttgaaagca
     1081 taaaggtgaa aggtccagga caatacgaaa tcgatctcgt ggacttgttc aaaggaaacc
     1141 cattagtgta caagttagcc gaaggaaaat atatcatcga cattcccagc acattttctt
     1201 cagagaaaaa gaaaaggaaa taagattata agccgtgttt ttcactatgc aatgcacgat
     1261 agttacaaat tgctccaaga tacactaaat cccttttttt acaaaaaaag ttgtcgaaga
     1321 acatcaacat tcttcacacc aactcgcgca gcagcaagca atgtcacgcc atggaaatcg
     1381 tactcagact ttgcaaacgt cacaagagaa aattttccag tatatcgcaa tggaccaatg
     1441 ttcatcggca ccacgcccca tgaacgtcca ggaacataga gaatatcccc taatagttcg
     1501 tgcagttctt tgaacgaatt tgcagatgtt ttcacgttca ccgtctgcat gtgtaatcga
     1561 ggcttaatgt ctccattgta aatcttctga acaagggcat ctggaaagag agaaagttct
     1621 cgacgggaga atcgtaaatc atcaaatata tgatctgttt cctgatgaag catctgcacg
     1681 taaaaatgtg ccagcgcaga ctgtcccgtg tttctaggat tttcttccac tggataaaga
     1741 agaccggact gcgattcaat aaaatcaatc ccaaagtctc caacatagcc ccgttttctt
     1801 ttttctaggg caatgcgcac ccccatctcc acaagttctc gctcgacatg cgggctacca
     1861 ttcaacggat aacaatttcc ttgatgctct cgattcaaaa gaatctgtct gccaacagga
     1921 cttaagcgat aaatcgtgcc atcagaaaga atgcgaaaca tcgcacttgg gctcttgtga
     1981 ggagaacaat cgcgttcgac gaggaacgcc gtcatttccg tgtcagaaag catccattcc
     2041 aaggtctcat taaaacttgc actatcttca cccccatgaa gcgtacagat ttttttagaa
     2101 tttccagccg cgctgatatt gccgcgaata aaaacacgtc cacaaaattt cgtaagacct
     2161 tcaagcaacg catttgcgta ctgaagataa tgtacactga tatcatcgcc aagctttctt
     2221 gagacagtca cgccgtcgat aacaggaaca ccgatagctc ggcacatttc cttgaagtat
     2281 gctttatcat taaacttctg aattttttcc gtctcagaac caaaataatc cagctcaagc
     2341 gtttctgcaa cttcacgttc cttggaagag taccaaaacg gatgccaggt accatgcata
     2401 ccgaccgcat cacagtgatt atgcacgcgc gcttcgactt gtttgagaag gcgatcgtcg
     2461 ccaagcaacc ggtcagcaag gggaatgttt ccatcctctg gcaagagtac aacattatca
     2521 gggtgtgtcc ccaggcctac atcatggagc cattgcacat agtccttatc ataggtattt
     2581 ccagtaatca gaacaaggtc ctgcggcgct gcaacgttca atgcacgctg gtcatagcgt
     2641 cctatcgctt ctattgcatg gatcagccct cgaattccgt cagctgcata cgggcacttg
     2701 ctatgcactg taaagccgtc gatacctgaa gtatacggca tcaaaggact ttgtaccagc
     2761 tgctcgactt cattttctag agaggattct tgagacatag aaaaaattgg agaaagagga
     2821 cctttttaaa tgtttcgaga cgaaaaaagt ttgggacaga ttcataggca ttgttgcagt
     2881 catgcacagg aaatcttata agaagcaaac aaccaaagag agcaatggat tttttcttcc
     2941 cacatgacca gtacagaaag attcaagaat cgttcatgaa gcaggtctac gcagttattc
     3001 aaaataaagg acaactgcta gcgcatgcgc cgactggaat tggaaagacg gcatcagctt
     3061 tatctcctgc actcacctat gtccttaagc aagatccaaa aaagatgata ttctttctca
     3121 catcaagaaa tacccagcac ctgattgccg tagaaacgtt aaagaaaatt aagacaaaat
     3181 acccgacgaa ttttgtcact gttgacttaa tcggaaaaaa gggcatgtgt aaccagccag
     3241 gggctgagtt gatgagttcc ggagaattta ttgagtactg taaaggcctt cgtgaaaaag
     3301 acgagtgtcc attcttcaat aacctcaggc agaagggaaa aatatccgcc gaagcacaga
     3361 acgtactgca aaagctgaaa caagaatcac cattgcacgt cgaagaaatt aacagcacct
     3421 gttttcatgc agacctctgt agctatgaga cggcatgtct tttgggaaaa gatgcgcaag
     3481 tagttattgc ggattacaat tatattctca atcctcatat ccgcgaaagc ctcttcaagc
     3541 gcatcaacaa aacgctcagt gattgtataa ttatttttga cgaagggcat aacgttccaa
     3601 atcgtgcacg agacttgttg acaggaacgc tctccacctt catccttgaa aatgcggcaa
     3661 aagaaacgca ggcattcggc ttcgaagaaa tcgcaaacga tatccttgca atcaaagtcc
     3721 ttgtagaaaa gcttgtaaaa gaaaaaatat ctgaagataa agaagagatt gtcgtaaaaa
     3781 aggacgaatt ttttaagagg gtagaagcaa tcggaaatta tgaagaaata aagggtaact
     3841 ttgatttcgt cggagaacaa gtccttgaga aaaagaaaag aagttttaca gcatcggtcg
     3901 ctgcattcat ggaccaatgg ctcggtcctg acgaagggtt tacacgaatc ctcagtaaaa
     3961 aaatatcaaa gataggaaaa ccggtgctgc tgctccagta ccgctgcctt gatcctgcac
     4021 tcgttatgcg cccgatcctt caagaag
//
LOCUS       DATDZU010000029         2988 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_110403, whole genome shotgun sequence.
ACCESSION   DATDZU010000029 DATDZU010000000
VERSION     DATDZU010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110403"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1547)
                     /locus_tag="VJJ79_00945"
     CDS             complement(<1..1547)
                     /locus_tag="VJJ79_00945"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HLC22323.1"
                     /translation="MKKKKVIILLVIILLVFLSFPNAKPYIGASIGITPALSEETSIE
                     PAVVEQLQEQETVPVIITLETPLENLTHIEQFFASDIPLEHVSQNQYAAEISEQELQD
                     LLTDPNVISIDKDELFTLLLTTTVPLINASVVHARQNGTQNLTGYGQSVCVIDSGVNT
                     THPGISGNIIAQKCFCDVSDLGGGGCCADATNEDTMATDDNGHGTYIAGIIAANGTSA
                     LGVAPEAGIVSVKVTNASGVALFSDITEGVAWCTSNASIYNISVISMSLGGGSYTSAC
                     DSNYASLSAEIQAAFDANVTVVVATGNSGSTTAITAPACINKTIAVSSTTTADTISSF
                     SNRNSITDVMAPGSSITSLSRNGGTESRSGTSISAPHVAGLIALLQQYKEDVEGRNLT
                     VTEINDTITTNGTLINDTSGSGRTFIRINAFSSLRALLKGPLVTIYNPENNLNTNNNS
                     LTFNFLMTDKYATVNCTLLLNNNANQSKIVANTVEEFRQNLSEESYEWYVSCQDADQL
                     AENSTART"
     gene            complement(1604..1678)
                     /locus_tag="VJJ79_00950"
     tRNA            complement(1604..1678)
                     /locus_tag="VJJ79_00950"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1641..1643),aa:Met,seq:cat)
     gene            complement(1942..2412)
                     /locus_tag="VJJ79_00955"
     CDS             complement(1942..2412)
                     /locus_tag="VJJ79_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22324.1"
                     /translation="MKTLSYGLMALSIGCLPKKGEVSSQQEQQVVQEPRARRIATFLH
                     QTGVEYNNFFCRGYTNKVNGEKSLITACYVGIDPQTEQEFANALVISFSNQQFILIDR
                     GADDSLDDIVMFADVPVSVPIERFSAKDQRDHRKNYANVLEELYVATFEEEKTN"
     gene            2498..>2988
                     /locus_tag="VJJ79_00960"
     CDS             2498..>2988
                     /locus_tag="VJJ79_00960"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22325.1"
                     /translation="MLIKIEQGTPLLGVLAYGIIDRGTNLLQVRPTSVCNINCTFCSV
                     DGGSLSTKHAVFYEVNCAYLLEEVGKVVARKGYGVEINIDSVGEPFCYPHLEELVNGL
                     RKIGGVQRITIQTNATILKDIDVDLINVSFHAMDPKLAMELANSPCFSIDHVKKFVET
                     YRT"
BASE COUNT          753 a          561 c          683 g          991 t
ORIGIN      
        1 gttcgtgcag tgctattttc tgccaactga tcggcgtctt ggcacgagac gtaccattca
       61 taactctcct cggaaaggtt ctgcctgaat tcttcaactg tatttgcaac tatctttgat
      121 tggtttgcat tattgttcaa aagaagtgtg cagtttaccg ttgcatactt atcagtcata
      181 agaaaattga acgtcagaga attgttattt gtattcagat tattttctgg gttgtagatt
      241 gttactagtg gtccttttag gagagcgcgt aaagaactga atgcgttgat gcgaatgaat
      301 gttctgccac ttccagaggt atcgttaatt agtgtcccat ttgttgttat cgtatcgtta
      361 atttctgtga ccgtaaggtt ccttccttcg acatcttcct tgtactgctg taagagtgcg
      421 atgagacctg caacgtgcgg cgcggatatg gacgttccgg agcgtgactc agttccgcca
      481 tttcttgaaa gcgacgttat agaagagcca ggggccatga catccgtgat gctgtttctg
      541 tttgaaaagc ttgagatcgt atcggcagtt gttgttgatg aaaccgcaat agttttgtta
      601 atgcatgccg gagctgtgat tgctgtcgtt gaaccggagt ttcctgttgc tacaacaact
      661 gttacatttg catcaaacgc tgcctgaatc tctgcagaaa gggatgcgta attagaatca
      721 catgcgctag tgtatgaacc tccgccgagg ctcatagaaa taacagaaat attgtagatt
      781 gatgcgttgc tggtgcacca cgccactcct tctgtaatgt ctgagaatag tgcaacgcca
      841 gaagcgtttg ttacttttac tgagacaatg cctgcttccg gcgcgacgcc gagcgcagag
      901 gttccatttg ctgcgataat tccggcaata tatgttccgt gcccgttatc gtccgttgcc
      961 attgtgtctt catttgtcgc atctgcgcaa cagccgccgc cgccaaggtc agatacgtca
     1021 caaaaacatt tttgtgcaat gatatttcca gatatccctg ggtgcgtcgt gttgacgcct
     1081 gaatcaatga cacatacgga ttgtccgtag ccggtaagat tttgtgtgcc attttgtctt
     1141 gcatgcacaa ccgatgcgtt aattaaagga acggtggttg tgagaaggag agtgaatagt
     1201 tcgtctttgt cgatagaaat cacgttgggg tcggtaagaa ggtcttgcag ttcttgctct
     1261 gagatttctg cagcatattg gttttgagaa acatgctcta aagggatgtc gcttgcaaaa
     1321 aattgttcga tgtgcgtgag attttctagt ggtgtttcta aggtgataat aactggaacg
     1381 gtttcttgtt cttggagttg ttctactact gccggttcaa tgcttgtctc ttccgatagg
     1441 gctggtgtga tcccgatact tgcacctatg tacggcttgg cattggggaa cgagagaaag
     1501 actagaagaa ttatcactag aagaattatc actttttttt tcttcataag atttatttag
     1561 tgctattagt tatttaatat tttctctttt tagaaataat tagtagcggg gagtggattt
     1621 gaaccaccga ccttcgggtt atgagcccga cggacactcc tgactgtcct accccgctgt
     1681 ggtgttacat ttctccaatt tctttatata gtttgtggta tctataaata ttttttactt
     1741 tgaattattt acaagcatat ggaagaagaa attcgacctg gaaaatataa tacttttcaa
     1801 gtatgttctt atgaaatcct tagtgttgca cagcatacag aaaaaaatag gaaactcctt
     1861 tttgcgcgac cgaaatatat gttttttgaa attatcgttt atggaggagg gggagtgtcc
     1921 gctctttcag tatgtaagtt cttagttcgt tttttcttct tcgaacgttg ctacatatag
     1981 ctcttcaagg acgtttgcgt agtttttgcg atgatctcgt tggtcttttg cagagaatct
     2041 ttctattgga actgatacag gaacatctgc aaacataacg atatcatcaa ggctatcgtc
     2101 cgctcctcta tcgataagga tgaattgctg attactaaaa cttatgacga gggcatttgc
     2161 aaattcctgc tctgtttgcg gatctatgcc tacataacat gcagtgataa gacttttttc
     2221 tccattgact ttgttggtgt atcctcggca aaaaaaatta ttatattcta ctccggtttg
     2281 gtgcaaaaat gttgcaatcc ttcgtgcacg tggttcttgt acaacttgtt gttcttgttg
     2341 agaagaaact tcgccttttt ttggtaagca gccgatgctt agtgccatga gtccatatga
     2401 tagagttttc atacctttta gttatgtgct ggaactataa aaagatgatt gtcttctgcc
     2461 aaaaagcttt ataaaggctc tttttagtgc aaaggctatg cttattaaga ttgaacaagg
     2521 aacgcccctc ttaggtgttt tagcatatgg gattattgat agagggacga atcttcttca
     2581 agtcaggccg acgtcagtgt gcaatatcaa ctgcactttt tgttccgttg atggcgggtc
     2641 tctctccacg aagcatgcgg tcttttatga agtgaactgt gcgtatcttc tagaggaagt
     2701 tgggaaggtt gttgcccgca aaggatatgg cgtcgagatt aatattgatt ctgtcggcga
     2761 accattttgt tatcctcatt tagaggagtt ggtgaatgga ctgagaaaga taggtggagt
     2821 acagcgcatt accatccaaa ctaatgcaac aatattgaaa gatattgacg ttgatttgat
     2881 caatgtttcg tttcatgcca tggatcctaa attagcaatg gaacttgcaa actctccttg
     2941 tttttctatt gatcatgtga aaaagtttgt cgagacgtat cgaacaaa
//
LOCUS       DATDZU010000030         6508 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_804881, whole genome shotgun sequence.
ACCESSION   DATDZU010000030 DATDZU010000000
VERSION     DATDZU010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6508
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804881"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VJJ79_00965"
     CDS             <1..833
                     /locus_tag="VJJ79_00965"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HLC22326.1"
                     /translation="YDAIKNEKLPLYTSHHQEKKKQLEWISIDDARKHKHIKSKAYAW
                     CLNLAYQQFLSMGIPKERIRIRQHLSTERAFYADDAWDIEIELRSFGWTECCGVHDRT
                     DYDLKKHAAFSKQNLEATRDNGEKFVPHILEIAFGTDRPVFALMDIFYEKKEENEGKT
                     IFHVPYCMAPLDVAVFPLMKKDDLPEYAGKIKALLEKEYLVDYDESGSIGKRYLRAAE
                     AGIPYAITIDYDSLKNKDVTIRDRDTEKQVRVSEKELKETLRRLSIGEISFEMAGKAL
                     "
     gene            912..1262
                     /locus_tag="VJJ79_00970"
     CDS             912..1262
                     /locus_tag="VJJ79_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22327.1"
                     /translation="MRRLTPNEKELIIKLIWEGVSLNKISLLTKRRKSVLYYYYKKIK
                     GKKYKEPQFEITFSESEGEIVGIFAGDGSQYYAKSNGAYQVNVHFGNVPEYISYVKEL
                     YESYFGKKWAKYAR"
     gene            1662..1735
                     /locus_tag="VJJ79_00975"
     tRNA            1662..1735
                     /locus_tag="VJJ79_00975"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1696..1698,aa:Ala,seq:ggc)
     gene            1738..1809
                     /locus_tag="VJJ79_00980"
     tRNA            1738..1809
                     /locus_tag="VJJ79_00980"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1770..1772,aa:Ala,seq:cgc)
     gene            1873..1961
                     /locus_tag="VJJ79_00985"
     tRNA            join(1873..1893,1909..1961)
                     /locus_tag="VJJ79_00985"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1922..1924,aa:Phe,seq:gaa)
     gene            2037..2564
                     /locus_tag="VJJ79_00990"
     CDS             2037..2564
                     /locus_tag="VJJ79_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22328.1"
                     /translation="MNKRGAIELSMTTIIVIVIGVTLLSLGLVWIRSTFSQVEQLTQG
                     AFEQGETQISEIFAGSNEPVALSPSETKLKQGKTTTATLTINNLGDSDAEVYAEVVAK
                     AFGGEEAKDLACGFSDTLTSKTNEYTLESGEGATLKILVEDSGANLGTYACVITVSGL
                     PDGEETISLIITVEK"
     gene            2592..3437
                     /locus_tag="VJJ79_00995"
     CDS             2592..3437
                     /locus_tag="VJJ79_00995"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HLC22329.1"
                     /translation="MNIFVERYKAMGETIQFVKVRLAIRVNTKKITLEKLKERLEERG
                     VTVEKIPFVKHGLYIKSRFNIVSTPEYLLGYFYIQDAAAQIPAEILNPKSLVLDCCAA
                     PGGKTTQLALYAPVIAIDNDKDRFVAIENNLERLGIDNCIGYCMDLRMMQKKFDYILL
                     DAPCSGNYMLEEGWMQKNSLKRIEERSRLQQELIAHAISLLNQNGVLVYSTCSLEPEE
                     DEDVIQFALDNLQVKLEKVDTIGDPGITKFEEKQYDASMKLCRRLWPHKTNTIGFFIA
                     RLRKK"
     gene            3434..3886
                     /locus_tag="VJJ79_01000"
     CDS             3434..3886
                     /locus_tag="VJJ79_01000"
                     /inference="COORDINATES: protein motif:HMM:NF015610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22330.1"
                     /translation="MIHDFVALFTEKKIDAVHIFNKYFYANKYLEKYRLQAKERVFGL
                     YLGEEKEGVFIPSFNLLDWLAHHSKEKVFVKDIGEMDFLYGKNLRARHVEKVEGKPGH
                     SIAKLVQNKYDENLGYGIIIGDVTKKEQVLKHKKDRGDFLKRERAQKD"
     gene            3915..5315
                     /gene="cysS"
                     /locus_tag="VJJ79_01005"
     CDS             3915..5315
                     /gene="cysS"
                     /locus_tag="VJJ79_01005"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013702399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HLC22331.1"
                     /translation="MKVYNTLTRKLETFAPINKNSVRFYACGPTVYNYQHIGNLRTYI
                     FNDILKRVLIFNGYKVKHVMNVTDVGHLTGDGDEGDDKVLLALQREHLPISKESMLKL
                     TKKYMAHFLSDCKKLNLLPSDIVCKATEHVPEMIEIIKKIQKNGFAYETEPAVYFNVS
                     QDKRYGELGRLRLDDLEAGARVKVDPHKKNPLDFVLWFKAVGKHAKHVMQWDAPFGRG
                     FPGWHIECSAMSMHYLGEQFDIHTGGIDHIPVHHTNEIAQSEAATGKHPWVKYWMHGE
                     FLIVGEEKMAKSRGTFVILDDLVEKGYDPLAYRYFCLLTHYRKQLAFTFEGFGAAQNA
                     LQKLRLKIQELLNYPQRGEKSSEKYIEEFQHAVNDDLNMPQAVATVWNMVKDETVNNT
                     QKYKALCEFDRVLGLSLNTIKKVKVPNEIKALLTKREDARLHKHWAEADILREEIQKR
                     GYIVDDMPSGPLVKKA"
     gene            5349..5705
                     /locus_tag="VJJ79_01010"
     CDS             5349..5705
                     /locus_tag="VJJ79_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22332.1"
                     /translation="MTESLEERFRLYYSSRFRNVLAINWAFHNDGYVSGDCYVRAIIS
                     ETYFAENNNPPYTEPMTLAEARVFISEKKELLGDMIHDCIGLQLEDNLIGNVPKKIIF
                     PEPVTIRNRIAQHMYD"
     gene            complement(5865..6002)
                     /locus_tag="VJJ79_01015"
     CDS             complement(5865..6002)
                     /locus_tag="VJJ79_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22333.1"
                     /translation="MEEFFTFSVSPLYLNDSVLAERAIHLLDKIKEVTGVEYAFTEIQ
                     Q"
     gene            6232..>6508
                     /locus_tag="VJJ79_01020"
     CDS             6232..>6508
                     /locus_tag="VJJ79_01020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22334.1"
                     /translation="MCETSQEEMMRYLSLPKDGPWVAVRETFASSDEEARRLLRERIQ
                     RAQVWFFDLDDNHAYSPAKTIAKNATGTSYLSPTYLLWCMTTAWALFR"
BASE COUNT         2124 a         1182 c         1464 g         1738 t
ORIGIN      
        1 agtatgatgc aattaagaac gaaaagttgc ctttgtacac tagccatcac caagaaaaaa
       61 agaaacagct tgaatggata tccatcgacg atgcacggaa gcataagcat atcaaaagca
      121 aggcgtatgc gtggtgtttg aatctcgctt atcagcaatt cctctctatg ggaataccaa
      181 aagaacgtat tcgtatccga cagcatttgt ccacggaacg tgcattttac gcagacgatg
      241 cgtgggacat tgagattgaa cttcgatcat ttggctggac tgagtgctgc ggcgtgcacg
      301 accgtactga ttatgattta aaaaaacacg ctgcgttttc caagcaaaat ttggaagcaa
      361 cacgggataa cggtgaaaag ttcgtgccac atattctcga gattgcattc ggaacagatc
      421 gcccagtgtt tgcgctgatg gatatattct acgagaagaa agaggagaat gaaggaaaaa
      481 caatattcca tgttccttat tgcatggctc cactggacgt tgccgtattc cctttgatga
      541 aaaaggacga cctgccagag tatgcaggaa aaatcaaggc attgctggaa aaagaatatc
      601 ttgtggacta tgatgagtca gggtctattg gaaagcgcta cctgcgtgca gcagaggcag
      661 gaattccgta tgcaattaca attgattatg attctttgaa gaacaaggat gtaactatca
      721 gagatagaga tacagaaaaa caagttcgcg tttctgaaaa agaattgaag gaaacactgc
      781 gaagattatc tataggagag atttcttttg agatggctgg aaaggcattg tagaaaagtt
      841 ttcggatatt ctgaaagatt ttcggaattt ttagcgaaag gctttttaat tctaattctt
      901 cagaacttct attgcgtcgc cttacaccaa atgaaaaaga attgataata aaactaatct
      961 gggaaggagt ctcactcaat aagatttctc tattaacaaa aagaaggaaa tcagttctct
     1021 actattacta caagaagata aaaggaaaga agtataagga gccacagttt gaaattactt
     1081 tttctgaatc agaaggagaa attgtaggaa tctttgcagg tgacgggagc cagtactatg
     1141 caaaatctaa tggagcatat caggtaaatg ttcattttgg aaatgtccca gaatatatct
     1201 catatgtaaa agaactatac gagtcctact ttgggaaaaa atgggcaaaa tatgcacgtt
     1261 aatcactatc ctaaccccac ttatcggatt agagtctcag ataagaagat atatttcttc
     1321 ttttggaatt atttggaata tgtttctcaa ataaagcatt gtaccgttcg gctaaagact
     1381 atggattttc ctaaaaaatt taagattggt tttttgcgcg gattactaga tacagatggc
     1441 tgtgtttaca caaatggaaa atacatttct atcaggtatt atacaacatc ttctgcattg
     1501 gcagaacaga tttgttcatt actttcttca ttaggaatag tatctagtct atatagaata
     1561 gtaagtaaga agggatacaa agatatattt gtcattcaga tatgggcaaa gagtaaggat
     1621 agatttttaa atatgataaa acctttcaaa gccagaaaat tgggcaggta attcagcctg
     1681 gtagaatgct cggctggcag ccgagttgcc gagggttcaa atccctccct gtccattggg
     1741 ccggtagtta agtggtataa cgctacgttc gcaacgtaga ggccgcgggt tcgatccccg
     1801 cccggtccat ttttattttg gagaatacga aatctttata taacgtcagt cgtttttgtg
     1861 tggatactcc ttgggacagt agctcagcct gggaccttta ggcaggaaag agcataacgc
     1921 tgaagacgtt agggtcgctg gttcaaatcc ggcctgtccc attttttata taagattcgt
     1981 atctcgagag aaacatatat aaattacaac tgctactaac aaaaaaaggt gaatgcatga
     2041 acaaaagagg tgcaatagaa ctttctatga cgactattat tgttatagtc ataggggtga
     2101 cgctcttaag ccttggccta gtctggattc gctcgacgtt ctcgcaagta gagcaattga
     2161 cacagggagc atttgaacaa ggggaaacac aaatctcaga aatttttgcg gggtccaatg
     2221 agccggttgc tctttctccg tctgaaacaa aactgaagca gggcaagacg acaacggcaa
     2281 cattgacgat caacaatctt ggcgacagcg atgcagaagt gtacgcagag gtcgtggcaa
     2341 aagcatttgg cggtgaggaa gcaaaagacc ttgcgtgtgg cttctctgac acgctcacat
     2401 cgaagacaaa cgagtataca cttgaatctg gtgaaggggc aacattgaaa attcttgtgg
     2461 aagatagtgg cgcaaacctt ggcacatatg cgtgcgtaat tactgtttca ggattgcctg
     2521 acggtgaaga aacaattagt cttattatca cggtggaaaa gtaaataaac acacaatatt
     2581 ctttttcttc tatgaacatt ttcgtcgaac gctacaaagc aatgggggag acaattcagt
     2641 ttgtcaaagt caggctcgca atccgcgtca atacgaaaaa gatcacattg gagaaattaa
     2701 aagaacgatt agaagagcgc ggtgtcaccg tcgaaaagat cccgtttgtc aagcacggct
     2761 tgtatatcaa gtccagattt aatatcgtca gtacaccaga gtatttgttg ggctatttct
     2821 acatccaaga cgccgcagca cagatccctg cggaaatctt gaatccaaaa agtctcgtgt
     2881 tagactgctg cgcagcgccc ggtgggaaaa caacgcagct tgctctgtat gcgccggtga
     2941 tcgctatcga taacgataag gataggtttg tcgcaataga aaataatctg gaacggttag
     3001 gaatagacaa ttgtattggc tattgcatgg accttaggat gatgcagaaa aagtttgact
     3061 acatacttct cgacgcccct tgctctggca attatatgct agaagaagga tggatgcaaa
     3121 aaaattcttt gaagcgcatt gaggaacgaa gcagattaca acaagaacta attgcgcacg
     3181 caatatcgtt gttgaatcaa aacggggttc ttgtctattc aacgtgttca ttggaaccag
     3241 aagaagacga agacgtgatt cagtttgctc ttgataatct ccaagtaaaa ttagaaaagg
     3301 tagacaccat tggcgatcca gggataacga agtttgagga gaaacagtac gacgcatcaa
     3361 tgaaactctg tcgtcggtta tggccgcata aaacaaacac cattgggttt ttcattgcga
     3421 ggttacggaa aaaatgatcc acgattttgt tgcgctgttt actgagaaaa agattgacgc
     3481 agttcatatt tttaacaaat atttttatgc aaataaatat ctcgagaaat atcggctaca
     3541 ggcaaaggaa cgtgtcttcg gattatatct cggcgaagaa aaggaaggcg tgtttatccc
     3601 ttcattcaat ctcttggact ggcttgcaca tcattcaaaa gaaaaagtgt tcgtgaagga
     3661 tattggcgag atggactttt tgtacggcaa gaatctgcgt gcgcgccacg tagagaaagt
     3721 ggaaggaaaa cctggacaca gcatcgcgaa gttagtccag aacaagtacg atgaaaacct
     3781 cggctatggc atcataatcg gcgacgtaac aaagaaagaa caagttctca agcataagaa
     3841 agatcgtggc gactttttaa aacgggaacg tgcgcaaaaa gattaataag tgcagagatg
     3901 tttattggaa cgaaatgaaa gtctataata ccttaacgag gaaactagaa acatttgctc
     3961 ctataaataa aaatagtgtt cgtttttatg cttgcgggcc gacagtttac aactaccagc
     4021 atatcggaaa cctccggacg tacattttta atgatattct caagcgtgtt cttattttca
     4081 atgggtacaa agtcaagcat gtcatgaatg tgaccgatgt tgggcatctt acaggagatg
     4141 gagatgaagg ggatgacaag gtccttcttg cgttacagag agaacatctg cctatatcaa
     4201 aagaatcaat gctaaagtta acaaagaaat atatggctca tttcttaagc gattgtaaaa
     4261 aattaaatct gctcccttca gatattgtgt gcaaggcaac tgagcacgtg ccggagatga
     4321 ttgagatcat taaaaagatt cagaagaacg gctttgcata tgagacggaa cctgcggtat
     4381 actttaacgt ttctcaggat aaacggtacg gcgagcttgg acgattgcgg ttagatgatt
     4441 tggaagcagg cgcacgtgtg aaagttgacc cacacaaaaa aaatccatta gattttgtgc
     4501 tctggttcaa ggctgttgga aagcatgcaa agcacgtgat gcaatgggac gctccatttg
     4561 gtcgcggttt ccccggctgg catatagaat gttctgcaat gtctatgcat tacttgggag
     4621 aacagtttga tattcacact ggaggcatag accatattcc tgtccatcac actaatgaaa
     4681 ttgcacagag cgaagctgca acgggaaaac atccatgggt taagtactgg atgcacggcg
     4741 agttccttat cgttggcgaa gaaaagatgg caaaatcaag gggaactttt gtaatcctag
     4801 acgatcttgt ggaaaaagga tacgatccgt tagcgtaccg ctatttttgt ttgctcacgc
     4861 attatcggaa acaattggca tttacgtttg aaggatttgg cgctgcacag aatgcattgc
     4921 aaaagcttcg tctaaaaatc caggaactat tgaactatcc gcagagaggg gagaaaagct
     4981 cagaaaaata tattgaggaa ttccagcacg cagtgaatga cgatcttaat atgccgcagg
     5041 cagttgcgac agtgtggaac atggtcaagg acgagactgt gaacaatacg caaaagtaca
     5101 aagcattgtg cgagttcgat cgtgtcctcg gtctttctct taatacaata aaaaaagtaa
     5161 aagttccaaa tgagattaaa gcgttactta caaaacgtga agacgcgagg ctacataaac
     5221 actgggcaga agcagatatc ctgcgagaag aaatacaaaa aagaggatat attgttgacg
     5281 atatgccttc tggtcctttg gtgaagaaag cataaaactt ttaaggaaca acagttttaa
     5341 gaacaaaaat gacagagtct ttagaagaaa gatttaggct ttattactcc agcagattta
     5401 ggaatgtatt agcgataaat tgggcctttc acaatgatgg atatgtttct ggagattgtt
     5461 atgtacgtgc cataatctca gagacatatt ttgcagagaa caataatccc ccatacacag
     5521 aacctatgac gcttgctgaa gcaagagttt ttatttctga aaaaaaagaa ctgcttgggg
     5581 acatgattca tgactgcata ggattacaat tagaagataa tctaataggg aatgttccaa
     5641 aaaagattat ttttccagaa ccagttacta ttcgtaatag gattgcacag catatgtatg
     5701 actaaaaaga cagacatagc caaaatatct agaacctaaa aatattactt aggatatggc
     5761 tctttcaaat cggcaaaaaa ttgtttatca taccttccta ggaggatatt aatacctctt
     5821 ggaaaataat cttttggtcg tggtgtgcat ataaccataa aagctcattg ttggatttct
     5881 gtaaaggcat attctacacc agtaacttct ttgattttat ccagtaaatg tattgcccgt
     5941 tctgcaagaa ctgaatcatt gagatagaga ggactcacag aaaatgtaaa gaattcctcc
     6001 aaaccctaaa ctttctctct gattgcatcc ataagtattt cataactttc aaagcgacat
     6061 gctcatttgg atatcctaac gctgcgagat catttgtaac gtcagcaaaa tacgcttcag
     6121 tttcgtgcac attacttagt atcaatcggt ttcgtgtttg agaggaaagt tttcgtggaa
     6181 aataatttcc ggacacgaca tacacttttg agatgaacaa gctttataaa tatgtgcgaa
     6241 acgtcccaag aagaaatgat gcggtacctt tccttgccaa aagacggtcc atgggtcgct
     6301 gtacgagaga cgtttgcaag ttcagatgaa gaagcaagaa gactattacg agaaagaata
     6361 caacgggcgc aggtatggtt ttttgacctc gatgacaatc acgcgtactc tcctgcaaag
     6421 acgattgcaa agaacgcaac ggggacaagt tacttatctc ccacgtatct cttgtggtgc
     6481 atgacgacgg cctgggcgct gttcaggg
//
LOCUS       DATDZU010000031         2473 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_180737, whole genome shotgun sequence.
ACCESSION   DATDZU010000031 DATDZU010000000
VERSION     DATDZU010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180737"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..1059
                     /gene="scpB"
                     /locus_tag="VJJ79_01025"
     CDS             277..1059
                     /gene="scpB"
                     /locus_tag="VJJ79_01025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HLC22335.1"
                     /translation="MQDVKNKAEAVLFMTGRFMAVEEIATFCNVASVGLIKDALQELT
                     KEYAQRSCGLDVVQQDGKYKLDIKKDYHAMTTKLVSSSELDAPVQATLAVIAYKQPAL
                     QAEIVKMRGNSAYDHIKALKEAEFIVSERKGRTRLLKLTQKFFDYFNIVEAMLPEKFR
                     AVGEKQEQLAAAPVEEKKAEPIPVEEKKEEPLLAENKPAVLEKKPRKRRSPHHIEEQT
                     PLEPGETIATTPVEEAAELHNEEPQLPPVCLDADDFGTPTTP"
     gene            1056..>2473
                     /locus_tag="VJJ79_01030"
     CDS             1056..>2473
                     /locus_tag="VJJ79_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22336.1"
                     /translation="MKLRKETWTLLFIFFVAFGFHLAFLFQVPFFSSDESYFHLRHSQ
                     YITEHFSPIVYDSLSYGGNVILNTHILHYFLGILDIFLPEILVYKILPALFASSIVFV
                     IYLLAKKVTENEYAALFGALLAAFVPSFLSVTINQISTTTLFVPLFLFVLYGLLTLEK
                     QRMLFLFLSLILVLLEPLNLLLLFTLLMFIVLSLAESHAIQKNEMEAIGLFTLLFLLI
                     NLIFFKQLYLTQGLATVWQNLPLEIYGNLFQNFDLFQTIAIIGIVPLILGVLGLLVYK
                     KHDRTITLFQSVLFADFTLLLLRLIPFEEGVLFLAIVLCVTAAISIEKIVAYIRLTKA
                     ARYKSLLMATLVIVALVSLIIPSIVIARDVVREGVTVSEIEAMEWIRDNTPEDSVVAG
                     NVYEGNLIIAIAQRANIIDTQFFYAEDRILDVETIFTTESLVKATQALRKYGADYLYV
                     SKKSQDLYVVSELPYIKGESCF"
BASE COUNT          710 a          557 c          484 g          722 t
ORIGIN      
        1 ggactgaatg aatcttcttt ctcaaaggac aacacagctc tatacgacgt gaattttctt
       61 tgccttccac cttctcgctc aatatccctc gccaccagca aacgatcata cgactcgata
      121 acatttccat ccgcatcaac aggacgcaca ttctcgaata ccaaataatc atcttccatg
      181 catcaagaaa atttactctc agtttataaa cacttcgtta tttcattttt atcattatac
      241 gaaaattttt aaagctcccc cacttctagt cgatgtatgc aggacgttaa aaacaaggcg
      301 gaagcagttc ttttcatgac cgggcgcttc atggcagtag aagaaatcgc aaccttctgt
      361 aatgttgcga gcgtgggcct gatcaaagat gcattacaag agttgacaaa agaatacgcg
      421 caacgaagct gcggccttga tgttgtgcaa caggatggaa agtataaact tgatatcaaa
      481 aaagattacc atgcaatgac taccaaactt gtgtcttcct ctgaacttga tgcgccagtg
      541 caagcaaccc ttgccgtgat cgcgtacaaa caacctgcat tacaagccga aattgtgaag
      601 atgcgtggga acagcgcgta cgatcatatc aaggcactaa aagaggcaga gtttattgtc
      661 tcagaacgaa aaggaagaac gcgactccta aagctcacac agaaattctt tgactacttc
      721 aatattgttg aagcaatgct gcctgaaaaa tttagagctg taggagaaaa acaagaacag
      781 cttgctgcag cgccagtcga agaaaagaaa gctgaaccta ttcctgttga agagaagaaa
      841 gaggaacctc tccttgctga gaataagcct gctgttctag aaaaaaaacc acgaaagaga
      901 agatctccgc atcacatcga agaacagacg cccttggaac ctggagaaac aattgccact
      961 acgcctgttg aagaagccgc agaactgcat aatgaagaac cacaactgcc tcctgtttgc
     1021 cttgacgcag atgattttgg tacacccacc acaccatgaa acttagaaaa gaaacgtgga
     1081 cccttttgtt catatttttt gtagccttcg gttttcacct tgcattcctt ttccaagttc
     1141 cattttttag cagcgacgag tcctactttc atctgaggca ctcgcagtac atcacagaac
     1201 acttttctcc aatcgtctat gactcactga gctatggtgg gaacgtgatc ctgaacacgc
     1261 acatcttgca ttatttccta ggtatattag atattttcct tccagaaatc cttgtctata
     1321 aaattctccc tgcattgttt gcgagcagca ttgttttcgt gatatatctc cttgcaaaaa
     1381 aagtgacaga gaatgagtac gctgcattgt ttggcgcact gcttgccgca tttgtgccga
     1441 gcttcctcag cgtgactatc aatcaaatat caacgacaac attatttgtc cctctttttc
     1501 tttttgtact ctatggtcta ctcacactcg aaaaacaaag gatgctgttt cttttccttt
     1561 cacttattct tgtgcttcta gaaccattga atctgctcct gctctttacg ctgctgatgt
     1621 ttattgtcct ctcccttgca gaatctcacg ctatccaaaa aaatgaaatg gaagccattg
     1681 gactttttac ccttttgttt ctgctgatta atttaatctt tttcaaacaa ctgtacttga
     1741 cgcaaggact ggcaactgtg tggcaaaatt tgcctcttga aatctacgga aacttgttcc
     1801 agaatttcga cctgttccaa accattgcta ttatcggcat tgttccgtta atcctcgggg
     1861 ttcttggact tctcgtctac aaaaaacatg acagaaccat tacgcttttc caatcggttc
     1921 ttttcgcaga ctttacgcta ctgctcctgc gcttgattcc ttttgaagaa ggcgtgttgt
     1981 tcttggcgat tgtcctatgt gttactgctg ccattagcat tgaaaaaatt gttgcgtata
     2041 ttagactaac aaaagctgcg cgctacaagt ctctcctcat ggcaacgctg gttattgttg
     2101 cacttgtcag tctgattatt ccctctatcg tcattgcacg agacgttgtc agggaaggcg
     2161 ttactgtttc tgaaattgag gcgatggaat ggatccgtga caatacgcca gaagatagcg
     2221 tggttgcagg caatgtttac gaagggaact tgattattgc cattgcacaa agagcaaata
     2281 ttattgatac gcaattcttt tatgctgaag acaggattct cgacgtggag actatattta
     2341 cgactgaatc gctggtgaaa gcaacacaag cgttacgaaa atatggagct gattatttgt
     2401 atgtttcaaa aaagagccaa gacttgtatg tggttagtga gctgccatat ataaaaggcg
     2461 aaagttgttt tga
//
LOCUS       DATDZU010000032         4691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1804816, whole genome shotgun sequence.
ACCESSION   DATDZU010000032 DATDZU010000000
VERSION     DATDZU010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4691
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804816"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..442)
                     /gene="rpsJ"
                     /locus_tag="VJJ79_01035"
     CDS             complement(131..442)
                     /gene="rpsJ"
                     /locus_tag="VJJ79_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013328647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HLC22337.1"
                     /translation="MQKARIKLASTDIDKVNQTCSFIKDIADKTGVDMRGPIPLPTKR
                     LQLTTRRGPCGNGSSTWERFEMRVHKRLIDLGLDERALRLVMRVPIPEGLNIEIEMVD
                     V"
     gene            complement(472..1755)
                     /gene="tuf"
                     /locus_tag="VJJ79_01040"
     CDS             complement(472..1755)
                     /gene="tuf"
                     /locus_tag="VJJ79_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor EF-1 subunit
                     alpha"
                     /protein_id="HLC22338.1"
                     /translation="MAREKPHVNIVFVGHVDHGKSTTVGRLFYDAGVVDEQTMKKLKE
                     KAQELGKAGFEFAFIMDNLKEERERGVTIDLMHKKLTTKKYDYTIIDAPGHKDFIKNM
                     ITGASQADIAFLVVAATEGIMAQTKEHVFLCKTMNVKQIGVVVNKMDVANYSEAKFKE
                     VKDQVSALLKQVGYKLEEVPFIPVSAWKGDNVVKKTDAMAWYTGPTILEQLDIFKEPE
                     KPTHLPLRLPIQDVYNITGIGVIPVGKVETGVMKIGDKIIVVPAREGVGVKGEIKTIE
                     MHHEQITEAVPGDNVGFSVRGIEKKDIARGDVLGHADNPPTVVKEFTAQIIVLNHPTV
                     LTAGYTPVFHIHTAQVACQFVEIVKKLNPATGETVEEHPDFIKNGDAAVIKVKPMQPL
                     VIEKQKDIPQLARFAVRDSGQTVAAGMCIDYVKKA"
     gene            1906..2844
                     /locus_tag="VJJ79_01045"
     CDS             1906..2844
                     /locus_tag="VJJ79_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013042841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HLC22339.1"
                     /translation="MKRIVVTGGAGFLGSHLCERLLEEGNKVVCVDNFFTGSEENISN
                     LQNNRHFRIERKDITEPIFGLECDQIYNLACPASPVHYQKNPIRTFKTSVLGTLNMLG
                     VARRTGARILQASTSEVYGNPLEHPQKETYWGNVNTIGPRACYDEGKRAAETLMMDYH
                     RREDVEIRIARIFNTYGPRMATDDGRVVSNFIVQALKGEDLTIYGDGSQTRSFCYVTD
                     LIEGLVQLMNQKEHTGPINLGNPNEFSMLELAKKVLALTSSSSNTVYKDLPQDDPTRR
                     QPDITLARTILIWEPKVSLEEGLKETIAYFQKVLQE"
     gene            complement(2873..4144)
                     /gene="gatD"
                     /locus_tag="VJJ79_01050"
     CDS             complement(2873..4144)
                     /gene="gatD"
                     /locus_tag="VJJ79_01050"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF003217.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu-tRNA(Gln) amidotransferase subunit GatD"
                     /protein_id="HLC22340.1"
                     /translation="MKEGDMVRILTKDRQFEGVLMPSVHTESVVLKLSSGYNVGILKS
                     SVKKTVQLGKRISSLTKPKKHIHVSVKKTVSILHTGGTIASKVDYETGAVGAHFSPDD
                     LIEMFPELEALVNLNSRFLSNMWSEDMRFSHYNTMAKEIKKEVDKGVDGVIITHGTDT
                     MHFTAAALSFILEDLSIPVILVGAQRSSDRGSSDAAMNLVCAIEFMTQTDFAEVAICM
                     HKGMSDDMCWILPGLKCRKLHSSRRNAFQPVNAQPYAEIDYLTRKVHIVTPHFRKKDP
                     NKKLILQLFKDVRVGLVKTHPHMFADVFTTYTGYDGLVIEGSGLGHVPINKIDSDTSE
                     HQKIFAQLQNLAKKMPVVMASQTLFGRVNMNVYSTGRVLQEMGVLGNFSDMMPETTYI
                     KLAWLLSNYPKKVKEMIGQNLRGELSERSLI"
     gene            4432..>4691
                     /locus_tag="VJJ79_01055"
     CDS             4432..>4691
                     /locus_tag="VJJ79_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204135.1"
                     /note="GTPase; similar structure to tubulin; forms
                     ring-shaped polymers at the site of cell division; other
                     proteins such as FtsA, ZipA, and ZapA, interact with and
                     regulate FtsZ function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HLC22341.1"
                     /translation="MDFLVQSALQNMSANKTQTTEVGHANIKVIGCGGGGTNVTNWLY
                     KKGIQGAEILAINTDKQHLDMMEADKKILIGRNLTRGLGCGG"
BASE COUNT         1388 a         1057 c          898 g         1348 t
ORIGIN      
        1 cctgcataat tattttcata gtcttttatg aattttcgtg aatgagcgag gcgcagccga
       61 gcgaattcac gaaaattcta attagaagaa actcatcaat ctgctgcaaa gaaactatac
      121 atcaaccaaa ctatacgtca accatttcta tttcaatatt cagtccttca ggaataggta
      181 ctctcatgac aagtcttaaa gcgcgttcgt ccagtcccaa atcaattagg cgtttgtgca
      241 cgcgcatttc aaagcgttcc catgtgctgc tgccattgcc gcaaggtcct cttctggttg
      301 taagctgcaa acgtttggtt ggcaggggaa ttgggcctct catgtcaacg cctgttttgt
      361 cggcgatatc ttttatgaaa gaacaggttt ggttaacttt gtcaatatcc gttgacgcca
      421 gtttgattcg ggctttttgc attttattaa aataaaattt aataaaattg attatgcctt
      481 tttgacataa tctatgcaca ttcctgcagc aactgtttgt cctgaatcgc ggactgcaaa
      541 gcgtgcaagc tgtgggatgt ctttttgctt ctcaatcaca agtggctgca ttggttttac
      601 ttttattact gcagcatccc cgttcttgat aaagtctgga tgctcttcaa ccgtttcccc
      661 cgttgctggg ttcaatttct tgacgatttc cacgaactga caggcaactt gtgccgtatg
      721 gatgtggaat actggggtgt accctgccgt aagaacagta gggtggttca aaacaataat
      781 ttgtgccgtg aactctttaa caacagtagg tggattgtcc gcgtgaccaa gcacatctcc
      841 ccgtgcgata tcttttttct cgatacccct cacagagaac ccgacgttgt ccccaggaac
      901 agcttccgta atttgttcgt ggtgcatttc tattgtttta atttcccctt taacaccaac
      961 accttctcgt gctggcacaa caataatctt gtcgccaatt ttcatgacac cggtttctac
     1021 ttttccaaca ggaataacac caatacctgt gatgttatag acatcctgga taggcaaccg
     1081 aagtggtaag tgtgttggtt tttcaggttc tttgaaaata tctaattgtt caaggattgt
     1141 tggtcccgtg taccatgcca ttgcatcagt tttcttgaca acattgtccc ctttccatgc
     1201 actaaccgga ataaaaggaa cttcttctag cttgtatcca acttgcttga gcaatgcaga
     1261 cacttggtcc ttgacttctt tgaactttgc ttcactgtaa ttggcaacgt ccatcttgtt
     1321 gaccacaaca ccaatttgtt tgacgttcat ggtcttgcag agaaacacgt gttctttggt
     1381 ttgtgccata atcccttcag ttgcagcaac aacaaggaac gcaatgtctg cctgtgatgc
     1441 accagtaatc atatttttga taaagtcttt gtgcccggga gcgtcaataa tagtataatc
     1501 atattttttc gtcgtgagct ttttatgcat gaggtcaata gtaacacccc gttctcgctc
     1561 ttcttttaag ttatccatga tgaatgcaaa ttcgaaccca gctttcccga gttcttgtgc
     1621 tttttctttc aatttcttca tggtttgttc atcaacaaca cctgcatcat agaaaagtct
     1681 tccgactgtc gtactctttc cgtggtcgac atgaccgaca aagacaatgt taacgtgtgg
     1741 tttttctctt gccattcttc tatatcctcc actatattgt gttactctac gaaaaaggag
     1801 gtagtttata aaggttttgg ttctttagaa gaatatttta caacattact aatttacaac
     1861 aaattattca taaaatgtat aaagagaaaa ttttatcgga ataatatgaa acgaattgta
     1921 gtcactggag gcgcaggatt ccttggctcg cacctctgtg aacggcttct agaagaagga
     1981 aacaaagttg tgtgcgtaga taattttttt acaggaagcg aggaaaatat tagcaacctc
     2041 caaaacaatc gccatttcag aatagaacgt aaagacatca ctgaaccaat cttcggtctc
     2101 gaatgcgatc aaatatacaa ccttgcatgt cctgcatcac cagtgcatta ccaaaagaat
     2161 ccgattcgaa cattcaaaac atctgtgttg ggaacattga acatgttggg tgttgcacga
     2221 cggacaggtg cacgcatctt gcaggcgtca acatcagaag tgtatggaaa tcctctcgaa
     2281 catccgcaga aagaaacata ctggggtaat gtcaacacta tcggtccacg tgcgtgctat
     2341 gatgagggaa agcgtgctgc agaaacattg atgatggact accaccgacg agaagacgtt
     2401 gagattcgca tcgcacgcat tttcaataca tacggtccac gcatggcaac ggacgatggc
     2461 agagtcgtct cgaattttat cgtccaagca ttgaaaggag aagaccttac tatatatggc
     2521 gacggttccc agacgcgaag cttttgttac gtgactgatc tcatcgaagg gttagtccaa
     2581 ctgatgaacc aaaaggaaca cacaggacca attaacctag ggaatcctaa cgaattttct
     2641 atgcttgaat tagcaaaaaa agttcttgca ctcacgagct cttcctcaaa taccgtctac
     2701 aaagacttgc cacaggacga tccaactaga aggcaaccag acatcacact tgcacgcact
     2761 atcttaattt gggaaccaaa agtgtccctt gaagaagggc tgaaagaaac gattgcatac
     2821 ttccaaaaag tattgcaaga ataagatatt taaaagaata caggacgctt gctcagatga
     2881 ggcttctctc gctcaactct ccgcgaagat tttgtccaat catttctttt acttttttag
     2941 gatagtttga caacaaccat gcaagcttaa tataagtggt ttctggcatc atgtcagaaa
     3001 aattgccgag cacacccatc tcctgcaaca ctctccccgt agaatagacg ttcatgttca
     3061 cgcgtccaaa caatgtctgg ctcgccataa caacaggcat tttcttcgct aaattttgaa
     3121 gctgtgcaaa aatcttctgg tgttctgacg tatccgaatc gattttatta atcggcacat
     3181 gcccaagccc gctaccctca atcactaacc catcataccc agtataggtg gtaaatacat
     3241 cagcaaacat atgcgggtgc gtcttcacca gtccaacccg gacatcttta aacaactgca
     3301 agattaattt tttatttgga tcttttttac gaaaatgagg agtaactata tgcacttttc
     3361 gcgtcaggta gtctatctct gcatatggct gcgcatttac cggctggaac gcgttccgtc
     3421 gagaagaatg caacttccta cacttcaacc ctggaagaat ccaacacata tcatcgctca
     3481 tgcccttatg catgcaaatg gcaacctcag caaaatcagt ctgtgtcata aactcaatcg
     3541 cacacacaag gttcattgca gcatcggaac ttcctcggtc actcgatctc tgcgcaccaa
     3601 caagaatcac gggaatagaa agatcttcga ggataaatga caatgcagca gcagtaaaat
     3661 gcattgtgtc cgtgccatgt gtgatgataa caccgtcaac acctttatct acttccttct
     3721 taatttcttt cgccatagta ttataatggg aaaaacgcat atcctcagac cacatattgc
     3781 tcaggaaccg cgagtttaag ttcaccaatg cttccaactc gggaaacatc tcaatcaaat
     3841 cgtcagggct aaaatgcgca ccaacggcac cagtttcata atctacttta gaagcaatcg
     3901 ttccgcccgt gtgcagaata ctcactgttt ttttcacaga aacatgtata tgcttttttg
     3961 gttttgttag tgaagagata cgctttccaa gttgcactgt ttttttcaca gaacttttca
     4021 aaatacctac attataccca gaactcaact tgagaacgac gctctcagtg tgcacagaag
     4081 gcatcagaac cccttcaaat tgcctatcct ttgtaagaat acgaaccatg tctccttctt
     4141 tcatagaact gagaaatgaa aagaaagttt atataacttc gcataaaaac atttatagtc
     4201 actgtaaaat acatattcca cttaaaaaat acttatatac taccattatt tatatttaaa
     4261 aataagtcga aaagaatttg gcgattcaaa gacttatcct ccaaaaaacc ttttggcgaa
     4321 ggttttcggc gaacaattga caacttctga agagggtata gtgcattacc attaataagg
     4381 atttgggtag taaatactat acatctcgat accacaaagg gggaaccaaa aatggacttt
     4441 ttagttcaaa gcgcactgca aaacatgagt gcaaacaaga cgcaaacgac cgaggtaggc
     4501 cacgcaaaca tcaaagtaat tggatgtggt ggtggaggaa caaatgtcac caactggctc
     4561 tataaaaaag ggatccaagg tgcagaaatt ctcgcgatca acacagacaa gcaacacctt
     4621 gacatgatgg aagcagacaa aaaaatcctc atcggtcgaa acctcacccg aggattagga
     4681 tgcggaggat t
//
LOCUS       DATDZU010000033         6710 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1293685, whole genome shotgun sequence.
ACCESSION   DATDZU010000033 DATDZU010000000
VERSION     DATDZU010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6710
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293685"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..664
                     /locus_tag="VJJ79_01060"
     CDS             <1..664
                     /locus_tag="VJJ79_01060"
                     /inference="COORDINATES: protein motif:HMM:NF013063.4"
                     /note="FEN-1; Rad2; similar to eukaryotic enzymes;
                     endonuclease that cleave the 5'overhanging flap structure
                     that is generated by displacement synthesis when DNA
                     polymerase encounters the 5'end of a downstream Okazaki
                     fragment; as 5'endo-/exonuclease and
                     5'pseudo-Y-endonuclease activities; cleaves the junction
                     between single and double-stranded regions of flap DNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flap structure-specific endonuclease"
                     /protein_id="HLC22342.1"
                     /translation="EEEMGKYARQFSWVNSQMFDESKLLLQALGLPVIQAPSEAEAQC
                     AYMAKKKVVWAAASQDYDSLLFGAPRLILNLTLSQKRKVAGGKQVYISPYLIELDSVL
                     EKLHLTQDQLIVLGILIGTDYNPGGVPGIGPKKALKLVQSEKSFEKIFSSFSVDFDWK
                     EIFDTFKDIPVNDVSLKFGALDEEKVKELLVEQHDFSMDRVESTLEKLRKGGGQTLKK
                     WF"
     gene            741..2459
                     /locus_tag="VJJ79_01065"
     CDS             741..2459
                     /locus_tag="VJJ79_01065"
                     /inference="COORDINATES: protein motif:HMM:NF013959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MopE-related protein"
                     /protein_id="HLC22343.1"
                     /translation="MLRSDYPSFETRFISSRLSLATFIGLAAVHCTSEPSSYSPISPS
                     EPSATEPCEKATWYEDADGDGYGNAARNLESCLAPKSWVSDHTDCDDTRDEVNPGQAE
                     VCDDLVDNDCDGTSNTCGLSGDLYLPNADFTIIGPNLSQSGTSLAGIGDVDGNGSNDL
                     AIGAPYFSDEGGAFVIYTPLDENNLSYVKLYGVSPVENYGNNSRVGHAISGAGDMDND
                     GYADLMVGAPFIDNDAGDNIGATYLVHGPVLENLFLDDANGIWYGEHTEDRAGYSVAG
                     TGDVNDDSFDDVLIGAYEVDINGERAGAVYLLYGPADKGGSLSSADAILVGENAYDLA
                     GWAVAGAHDTDGDGLADLLVGAYGNDTGGSLAGAAYLLRGPVEGELSLAVADAKFFGE
                     KEVDNAGYALAGGDIDGDGYADCIIGANSESSGGTFAGATYIVHGPIKGELSLSEANA
                     KILAEDYNDQGGSAVSVGDVNADGLDDVLIGASLADIGDEVDAGAAYLINGPVNGIVD
                     LETMTRTKFLGEDHGDTAGYAVAIAPDLNDDGYDDVLVGAPSVDLEGEMVYLAGATYI
                     YYGSGM"
     gene            2497..3411
                     /locus_tag="VJJ79_01070"
     CDS             2497..3411
                     /locus_tag="VJJ79_01070"
                     /inference="COORDINATES: protein motif:HMM:NF014527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22344.1"
                     /translation="MLCVQVLKKNAEAVKKKLLQQDLFAKGYLPLAGRQYVYFPVVKK
                     IHGFVYVDKRCKKLRHIEIDISSYDQVGDIAILGEHAQKSFAKELLKRKNVKVVLQRK
                     GIHEGEFRTQPLRWLAGEKRKETLYKENGVQMTLNVETCYFSPRLGTERMRIARQVKP
                     GEKVLVLFSGVGPYPLVIARHAKPSLIVGVEKNPVAHKYAVENCKKYPNILLYNVDAQ
                     DFESPEKFDRVLMPLPTAAEEFLDVAFTHAKKNGVIHFYDFTQETEFPENSLKKIREK
                     IKSFTVLDAVKCGQYAPGKFRVCIDVRV"
     gene            complement(3418..3645)
                     /locus_tag="VJJ79_01075"
     CDS             complement(3418..3645)
                     /locus_tag="VJJ79_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22345.1"
                     /translation="MKNKLCIHYDRKGDFLEVRFGKPTSSYYEDRGDDIFERRDEKTN
                     EIKGYAFFNITNKKRKQLKEIIIELPSITYS"
     gene            complement(3931..4455)
                     /locus_tag="VJJ79_01080"
     CDS             complement(3931..4455)
                     /locus_tag="VJJ79_01080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22346.1"
                     /translation="MGRNLEANIQGVIRHQNWDLDYYHGRVTNIWGTEFTVNLQPSGS
                     CLQLPGVTYPADKRIILREPCGDRIETTLNNSKEENMAYILAHEVGHADTWGISVALP
                     YLVLSVGVLQAIKKKSWTPMKTAALGLVGCKIVVDELLAETAATIFHDVPFMHGMYLS
                     LPNLEGFVRQLGNY"
     gene            complement(4584..5171)
                     /locus_tag="VJJ79_01085"
     CDS             complement(4584..5171)
                     /locus_tag="VJJ79_01085"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLC22347.1"
                     /translation="MQLKYHSVSKNIFYDVMKDDLAQKYLGALRKHHEETYRHSCRVA
                     LLSIDVGLESTVVGQRLKYLALGALLHDIGKLQTPTAILEKEGALGECERSVMNNHPQ
                     EGFKILQDLPCAVRYIVVSHHEWKKDSYPRKVHRMPLGKNDSLAEIVVAADIFDALAY
                     RRSYKPPFPKEEVERILCEQFTGDKTLIPLILGRY"
     gene            complement(5196..5765)
                     /locus_tag="VJJ79_01090"
     CDS             complement(5196..5765)
                     /locus_tag="VJJ79_01090"
                     /inference="COORDINATES: protein motif:HMM:NF013856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HLC22348.1"
                     /translation="MMYERKDFYYRRAKEEGFRARSAYKLLEIQKKYGIIPPDSDVLD
                     IGCAPGSWAQVARTLTHGRVVGVDLVPMDRISGVLFIQGDVRDTEVQKQLGTFNVILS
                     DTAPKTSGTKVQDQFLSLELSQQSFMIAKKHLRKNGALVVKTFQSQETEELIKEIKQE
                     FDFVKRYTPQATRHGSKEIYIIATGFRKA"
     gene            complement(5762..>6710)
                     /locus_tag="VJJ79_01095"
     CDS             complement(5762..>6710)
                     /locus_tag="VJJ79_01095"
                     /inference="COORDINATES: protein motif:HMM:NF017518.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HLC22349.1"
                     /translation="FERAKEIGIPTDFPFSIKATELTSEDWRLAFELPTSHSISILIE
                     KILGDFAEQKINEYSIDQIMGAIEHDNTFPAEVKNEALNRFKTAKRWGLFSDQGTKID
                     VLVKGGAVTILDMSAYATSEGGWGVKSLVIGLIARKVFIERMVSRQLEEIQAIRTGYS
                     YFKMEEEIKTKEKKPLVWFVLDEAHELLPSEGKTAATDALVTILREGRQPGLSLVLIS
                     QQPGKIHSDVLTQADIVIAHRLTAQQDVNALNSMMQSYLGETLQHYINILPADKGAAI
                     ILDDNSERLYPIRVRPKFSWHGGEAPTALKYQRKLGLEL"
BASE COUNT         1714 a         1385 c         1546 g         2065 t
ORIGIN      
        1 ggaagaagaa atgggaaaat atgcgcggca gttttcgtgg gttaactcgc agatgtttga
       61 cgaatctaaa ttattgttgc aggcacttgg cttgccagtt attcaagcgc cgtcggaagc
      121 ggaagcgcag tgcgcgtaca tggccaagaa aaaagtagta tgggcagcag cgtcacagga
      181 ttatgactcg ttgctattcg gtgcaccgcg tcttattttg aatcttacct tatcgcaaaa
      241 acgaaaagtt gcaggaggaa aacaggtgta catttctccg taccttatcg aactagactc
      301 cgttttagaa aaacttcatt taacgcagga ccaattaatc gtgcttggaa ttcttattgg
      361 tacggattac aaccctggcg gtgttcctgg catcgggcca aagaaagcac taaaacttgt
      421 gcagtctgaa aaatcttttg aaaaaatatt ttcttctttt tctgttgatt ttgattggaa
      481 agaaatattt gatacgttca aagatattcc tgtgaacgat gtttctttga aattcggggc
      541 attggatgaa gaaaaagtga aagaacttct cgtcgagcag catgattttt ccatggatcg
      601 tgtcgaaagt acgctggaga aattgcggaa aggcggcgga cagacgctga agaaatggtt
      661 ctagaatcct aagccagaat gaaatatctt cgttgaagga aaaagataag tatataaaca
      721 aattatatct tgctgaaggc atgcttagaa gtgattatcc ttcatttgaa acacgattta
      781 tttcttctcg actatcatta gcaactttta ttgggctcgc tgcagtgcac tgtacttcag
      841 aaccatcttc ctacagtcct atttctccta gtgagccttc tgcgacggag ccttgtgaga
      901 aagcaacgtg gtacgaagat gcagatggtg acggctacgg aaatgctgca cgaaaccttg
      961 aatcgtgtct tgcacccaaa agttgggttt ctgatcacac tgattgcgat gatacacggg
     1021 atgaagtgaa cccggggcag gcagaggtct gtgatgattt agttgataat gattgtgacg
     1081 gaacgtctaa cacctgcgga cttagtggag acctgtatct tcctaacgca gattttacaa
     1141 ttataggacc taatctatct cagtctggta cgtcacttgc aggcataggc gatgttgatg
     1201 gcaatggaag caatgatctt gcaatcggag caccttattt cagcgatgag ggtggagcgt
     1261 ttgttatata tactcctctt gatgaaaaca atttatcgta tgtgaaattg tatggagtat
     1321 ctcctgttga aaattacggc aacaacagtc gcgtagggca tgctatttca ggtgcgggtg
     1381 acatggacaa tgacggctat gcggatctca tggtaggcgc cccttttatt gacaatgatg
     1441 caggggataa tattggagcg acgtatcttg tccatggtcc agttttagaa aatctttttc
     1501 ttgatgatgc taatggcatt tggtatgggg aacatacaga agatagagct ggttattcag
     1561 ttgctggtac tggtgacgtg aacgatgata gctttgatga tgttcttatt ggtgcatatg
     1621 aagtagacat caatggagaa cgggctggcg cagtatatct tctttatgga cctgcagata
     1681 aaggtggttc gctttcttct gctgatgcaa tccttgttgg ggagaatgca tatgatcttg
     1741 ccgggtgggc cgttgctggt gcgcatgaca cagatggtga cgggcttgca gatcttctcg
     1801 ttggtgcgta tgggaatgat acagggggaa gtctcgctgg cgcagcgtat cttttaaggg
     1861 gcccggttga aggagaactt tctttagctg tcgcagatgc gaaatttttt ggagaaaaag
     1921 aagttgataa tgcggggtat gctcttgctg gcggggatat cgatggcgac gggtatgctg
     1981 attgtattat cggtgctaat tcagagtctt caggagggac gtttgctggt gcaacgtata
     2041 tagtccatgg ccctataaaa ggggaacttt ctctttccga agcgaatgcc aagattcttg
     2101 ctgaggatta taatgatcaa ggtggatctg cagttagcgt tggtgatgtg aatgcagatg
     2161 gacttgatga tgttcttatt ggtgcttcgt tggcagatat tggagacgaa gttgatgcag
     2221 gggcagcata tttgattaat ggccctgtta acgggattgt ggatcttgaa accatgacac
     2281 ggacaaaatt tcttggcgag gatcatggag ataccgcggg gtatgcagtt gcgattgctc
     2341 cagatttgaa cgatgatggc tatgatgatg tacttgttgg tgctcccagt gttgatcttg
     2401 aaggggaaat ggtttatctc gccggtgcga cgtatattta ctatggcagc gggatgtaac
     2461 gtacttttat aaataaaaac cgcttttttt cttgccatgc tttgtgtcca agtgctgaaa
     2521 aaaaatgcgg aagcagtgaa gaaaaaactt ctgcagcagg atctctttgc gaagggctat
     2581 cttccccttg ccggcaggca gtatgtatat tttcccgtcg taaaaaaaat tcatggattt
     2641 gtgtatgtag ataaacgctg caagaaactc aggcatattg agattgatat ttcttcttac
     2701 gatcaagttg gtgatattgc tatcctcggc gaacatgcgc agaaatcttt tgccaaagaa
     2761 ttattgaagc gaaagaacgt gaaggtcgtt ctgcaacgga aagggatcca cgaaggggaa
     2821 tttcgaacgc aaccgcttcg ctggcttgcc ggggaaaaac gaaaggaaac tctctataaa
     2881 gaaaacggcg tgcagatgac actgaatgtt gagacctgtt acttttctcc tcgactaggc
     2941 accgaacgaa tgcgcattgc gcgtcaagtc aagcccggtg aaaaagtgct ggttcttttc
     3001 tctggcgttg ggccatatcc tctcgtgatt gcaagacatg caaagccatc gttgattgta
     3061 ggcgtcgaaa aaaatcctgt tgcacacaaa tacgcagtag agaattgcaa gaaatatccc
     3121 aatatcctgc tgtacaatgt cgatgcacag gatttcgaat cgcctgaaaa atttgaccgc
     3181 gttctgatgc cacttcctac ggccgcagaa gaatttttag atgtggcatt cacccatgca
     3241 aagaagaatg gcgtgattca tttctatgac tttacacaag aaacagagtt cccagaaaat
     3301 agcctgaaaa aaattagaga aaaaataaaa tcttttacag tcctcgatgc agtgaagtgc
     3361 gggcagtatg ctccagggaa gttccgcgtc tgcattgatg ttcgtgttta ggactcgtta
     3421 agaatatgtt atactcggaa gttcgatgat gatctctttc agttgcttcc tttttttatt
     3481 cgttatatta aagaaggcgt agcctttaat ttcattcgtt ttctcatcac gtctttcaaa
     3541 tatgtcatca cctctatctt catagtatga agatgttggc tttccaaatc gtacctctaa
     3601 gaaatctccc ttcctatcat agtggatgca gagtttattt ttcattgtat atttttcgtg
     3661 taaaatgctg ttattacaaa gccatctccg tttaaatatt ttaccgacac caagatgtgc
     3721 agccttttct ttttcttata ctgataatac catcgtacat tttcatcata tatactcagg
     3781 gtcattttta taggattctc tagagtttct tttatatcct cgagagtgat atcggggtgt
     3841 tcttgctgaa tatgtttcca tccgtgtttc gttattctaa tctctctcgt agttttatca
     3901 cgaacgttat agactaccat ttgtcgtatt ctaatagttt cccagttgcc gtacaaaccc
     3961 ttcaagatta gggagactga gatacatgcc atgcatgaat ggaacgtcat ggaatattgt
     4021 cgccgcagtt tctgccaaca attcatctac aacaattttg caacctacta ggccgagcgc
     4081 tgctgttttc attggagtcc atgatttttt tttgattgcc tgcagaacgc ccacggaaag
     4141 gacaaggtat ggaagcgcaa cagaaatgcc ccatgtgtcc gcatggccga cttcgtgcgc
     4201 caagatatac gccatgtttt cttccttgct attgttcaat gttgtttcta tcctgtctcc
     4261 acatggttct ctcaagatga ttcttttgtc tgcagggtac gtgacgcctg gaagctgaag
     4321 gcagctgccc gatggttgga gattgacagt aaattccgtg ccccagatgt ttgtgacgcg
     4381 cccatgataa taatcaaggt cccaattttg atgcctgata actccctgga tatttgcttc
     4441 taaatttctt cccattcttt tcctccagag ctcacgctac cttgtgtggt ggtgcgagat
     4501 gctcttcttt ttctctaaat ggacaacctt aaaaaaactt tatagaaaaa agttaaaacc
     4561 ttttcagaaa aattgaagga ttttcaatac ctgcctagaa tcaatggaat tagtgtctta
     4621 tcgccagtaa attgttcgca gagaatcctt tctacttctt cttttggaaa tggcggtttg
     4681 tatgatcttc ggtaggcaag cgcatcaaag atgtctgcag caacaacaat ttctgccagc
     4741 gaatcatttt ttcctagagg catgcgatgt acttttctgg gatacgaatc ctttttccat
     4801 tcatgatgcg acacaacaat gtacctaaca gcacatggaa ggtcttgcag aattttaaat
     4861 ccttcctgag gatgattgtt cataacagat cgttcgcatt cgcctaatgc tccttctttc
     4921 tcaagaattg ctgttggcgt ttgtagtttt ccgatgtcgt gcagcaacgc gccgagcgca
     4981 aggtatttta atctctgccc tactacggtg ctctctaaac ctacgtcgat gctgagaaga
     5041 gcaacgcgac aactgtggcg gtacgtctct tcatgatgct tccgtagcgc gcccagatat
     5101 ttttgtgcaa gatcgtcctt cattacatca taaaaaatgt tctttgagac agaatggtac
     5161 ttgagttgca tacaaaaaca atcttttttt tctatttaag ctttcctaaa tcctgttgca
     5221 atgatataga tttcctttga cccgtgccgc gttgcctgtg gcgtgtacct cttgacaaaa
     5281 tcaaattctt gttttatttc tttgatcaat tcttctgtct cttgtgattg gaatgttttg
     5341 accaccaatg ctccattttt cctcaaatgt ttttttgcaa tcatgaacga ttgttgggaa
     5401 agttctaacg ataaaaactg gtcctgcacc tttgtcccgg acgtttttgg tgcagtgtct
     5461 gaaagaatga cattaaatgt gcccagttgt ttttgtactt ctgtatctct cacatcccct
     5521 tgaataaaca gtactcccga gatacgatcc atcggcacga gatctacccc gacgactcgt
     5581 ccgtgtgtta acgtccgtgc aacttgtgcc catgaccctg gtgcgcaacc gatatcgagc
     5641 acatcgctgt ccggcgggat tattccatat tttttttgaa tttcgagaag cttgtatgca
     5701 gaccgtgcac ggaacccttc ttcctttgcc ctgcggtagt aaaaatcttt tcgctcgtac
     5761 atcatagctc cagccccaat tttctttggt acttgagtgc cgtaggcgcc tctcccccgt
     5821 gccacgaaaa ttttggacgg acacggattg gatacaagcg ctcagagttg tcgtcgagaa
     5881 taattgctgc ccctttatct gcgggaagaa tgttaatgta atgctgcaac gtttctccaa
     5941 ggtaggattg catcatggag ttgagtgcgt tgacgtcctg ctgtgctgtc aatcgatgcg
     6001 caatgactat gtctgcttgc gttagcacat cagaatgaat ctttcccggt tgctgcgaga
     6061 ttaaaaccaa tgataaccct ggttgccttc cttcccggag aatggtcacg agtgcgtctg
     6121 ttgccgcagt ttttccctcc gacggaagga gctcatgcgc ttcatctaac acaaaccaca
     6181 ccaatggttt tttttctttt gtttttattt cttcttccat tttgaaatag gaataccccg
     6241 tgcgaattgc ctgaatttct tccaattgcc gagagaccat tcgttcgata aatactttcc
     6301 gtgcgatcag gccgatgaca agtgacttga caccccagcc cccctcgctc gtcgcgtatg
     6361 cggacatgtc gagaatcgtt accgcgccgc ctttcacaag cacatcaatt tttgttcctt
     6421 gatccgaaaa caagccccag cgttttgctg tcttgaatct gttcaacgct tcgttcttca
     6481 cttctgcagg aaacgtgttg tcgtgttcga ttgcgcccat gatttggtcg atggaatact
     6541 cattaatttt ttgttctgcg aaatcgccga gaattttttc gatgaggatt gagatggagt
     6601 gtgatgtcgg aagctcgaat gcaagacgcc aatcttcgct tgttagctct gttgccttga
     6661 tagagaatgg gaagtctgtc gggataccga tttcttttgc tctttcaaac
//
LOCUS       DATDZU010000034         4493 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1214186, whole genome shotgun sequence.
ACCESSION   DATDZU010000034 DATDZU010000000
VERSION     DATDZU010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4493
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214186"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="VJJ79_01100"
     CDS             complement(<1..962)
                     /locus_tag="VJJ79_01100"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HLC22350.1"
                     /translation="MKKVVVLILLVLLPIVSAQSQEFGNVSELVMSVSISSLITKESG
                     TLHTLKTTVGFIPQEFENQVLLSQEFSADPPASITLKENAVTYSWNVDSLQYEYLASS
                     VVQTKHHLVKVSEKVSFPALVDKNVATYTISNDLVDITPEIEDLAAKIVAGEDDVYIA
                     AYKLANWTQNNVAYNLSTLTTDAVQSSSWVLEHREGVCDELTNLFLSLTRSQGIPARF
                     VSGLVYSNINETFGNHGWAEVYIDGEWVPFDVTFGTLGWVDPSHIKFREEIGSNKASV
                     SYEWAGQGAQIHATAPDIETQILNLSTETLSYVNISIEPLNDAVG"
     gene            complement(1000..1461)
                     /locus_tag="VJJ79_01105"
     CDS             complement(1000..1461)
                     /locus_tag="VJJ79_01105"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HLC22351.1"
                     /translation="MRKYDDLIISYLRENSRMSLTQMSKRTNIPISTLYERIKGYQKK
                     VIKKHTAIIDFAQLGYGTRARVLFRVKKDVREDFKEHLLHSPYLNELYKVNNNYDFMA
                     EFIFRQMKEMEDYLDSLEEKYRVEKEVFYILEELKREGFLSKPTLLFFGAK"
     gene            1699..2124
                     /locus_tag="VJJ79_01110"
     CDS             1699..2124
                     /locus_tag="VJJ79_01110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22352.1"
                     /translation="MGKRSMQNFHKTMTLATALGLIGCSDDKYPGYHFDGDIQNNHVV
                     LKERGGLSLLVGDEQNYVHFIDKGPDMKVDYVTFRNGEEQKTYGRSDKIGKAVVDLAQ
                     PVFTRYMEGIETANITTAQEELKAIDLIEAPKQNCPKEE"
     gene            2130..2765
                     /locus_tag="VJJ79_01115"
     CDS             2130..2765
                     /locus_tag="VJJ79_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22353.1"
                     /translation="MVTVKGNGSDVSKYEQLTNLFVRDLPEQLNELERKLTFAYADHV
                     RAHAGKEGAGLGGVLYDIAKKQIRASLFQDKPYSDENAEAVIDDYVSGALGIEREGLE
                     AQLNGILRVPPAIVHQIHKGMVEGVQKLTLQVIGKRIKRFSTEETVPFRQYLLELAKK
                     MGRERPSKEDLLTLDVMRQVYIEDLLQNYLGFIGEQAQKEAQRKHSEMRYK"
     gene            complement(2802..3614)
                     /locus_tag="VJJ79_01120"
     CDS             complement(2802..3614)
                     /locus_tag="VJJ79_01120"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HLC22354.1"
                     /translation="MKFQIHYNEPREITRQYQQEDFILAKEFASRLYKEFGEFIRAIV
                     VFGSAAKGKAKTGDIDILVILDDVRIQFTEDIVQTYRIITQKVIADTNKDRLHIQSMK
                     FTSFWEYVRAGDPVATNILRYGIALIDTGFFDPLQMLLDQGRIRPTPESIAMYYSMAP
                     RSLARAEDHLMSATIDLYWSVIDAAHAALMHHGEVPPSPEHVAEIMRETLIKEKKISF
                     QSVRTMEELYALFKAITSRSKKRVSGQEYERYKKKAEIFVKEMDHFIRKEKK"
     gene            complement(3629..>4493)
                     /locus_tag="VJJ79_01125"
     CDS             complement(3629..>4493)
                     /locus_tag="VJJ79_01125"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HLC22355.1"
                     /translation="NRIEREARKFREGYVGLQRHRKELEKTYASVDHIETVGLERSAK
                     AFAEAAIYAYQLEKQKGLKKSLFVSPENLFAEWGYGAHPDELRDLIQASRKEMTEQLV
                     KKGTSKNEAKKIAEDHIKATFDIAHANTLAKYFESDPKLTPDEKKKEFDKWLLGKVGE
                     LQKDNIIGHVHMSDNFGYFDEHLNIGGGNAPIREFLKVLKDKKYEGDLVIEWGAQGPD
                     EPSGATLAAWAELARSPIYSVEGVGPRWSELETGGYFGRASSPFLSVGKYATAMGKDW
                     QLWGYSEAPIE"
BASE COUNT         1209 a          966 c          967 g         1351 t
ORIGIN      
        1 cctacagcat cattcaatgg ttctatagat atgttgacat acgacagtgt ttccgtgctc
       61 aggttcagga tctgtgtttc aatgtcgggc gcggtcgcat ggatctgtgc accttgtcca
      121 gcccattcat atgacacgga agctttgttt gatcctatct cctcgcggaa cttgatatga
      181 ctcgggtcca cccatcccag tgtgccgaag gtcacatcaa atggtaccca ttctccatcg
      241 atatacactt ctgcccatcc gtggtttcca aatgtttcat tgatgttact gtagacaaga
      301 ccagagacaa accgtgcagg gatcccttgg cttcgcgtga gcgagaggaa taaattagtc
      361 aattcatcac agactccttc cctatgctcg agcacccatg aggatgattg tactgcgtcc
      421 gtggtcagcg ttgataagtt atatgcaaca ttattctggg tccagtttgc aagcttgtat
      481 gcagcgatgt atacatcatc ttccccagca acaatttttg cggcaaggtc ttcaatctcg
      541 ggggtaatat cgacgaggtc gttggagata gtgtaggttg caacgttctt gtcaacaaga
      601 gcagggaagg aaactttttc tgacaccttg acaaggtgat gttttgtttg gacaacgctt
      661 gaggcaaggt actcgtactg taggctatcg acgttccagc tataagtcac ggcattttct
      721 ttgagggtaa tggaagcagg cgggtctgcg ctaaattcct gcgagagcaa tacttggttt
      781 tcaaactcct gcggaataaa accaacggtc gttttgaggg tgtgtaacgt tccgctttct
      841 tttgtgataa gtgaagaaat actcactgac atcacgagct cgctcacgtt cccaaactcc
      901 tgcgattgtg cagaaacaat gggcaaaaga actaagagaa ttaacaccac cacttttttc
      961 ataactttaa aatagaaaat gaattatata aatttattct tattttgctc caaaaaatag
     1021 aagcgtcggc ttgcttagga acccttcgcg ctttagctct tcaagaatgt aaaacacttc
     1081 tttttctacg cggtacttct cttcgaggga atctaggtaa tcttccattt ctttcatttg
     1141 cctgaagata aattctgcca tgaaatcgta gttattgttc accttgtaga gttcgttgag
     1201 ataggggctg tggagaaggt gttccttaaa atcttcccgg acatctttct tgacgcggaa
     1261 aagaacccgt gcccgtgttc catagcccag ctgtgcaaag tcaatgatgg cagtatgttt
     1321 tttgattact ttcttctggt accctttgat ccgttcatag agagtggaga tgggaatatt
     1381 ggtccgtttg ctcatttggg tgagcgacat gcggctattt tctctgaggt aggagatgat
     1441 cagatcatcg tattttcgca tatgcatcaa aaatggctgt tactataaag acctaatccc
     1501 taaaatgtac ataatatcta ggggttagtt tcttatacgc tgctatacga gaacctccaa
     1561 aacctttata aacaagtgtt ttaaggctat tggacggggt aacccggcac agtgcggtga
     1621 tgctgtgcca catatttatt aggggctttc aaggacgaaa agcttatata ctattgacta
     1681 ccctttaata gtaacaatat gggaaaaagg tctatgcaaa actttcacaa aactatgacg
     1741 ttggcgacag cattaggact tataggctgt agtgatgata agtatcctgg ctatcatttt
     1801 gatggagata tccaaaacaa tcatgttgtt ctaaaagaaa gaggtggctt gtctctgctt
     1861 gttggagatg agcagaacta tgttcatttt attgataaag ggccagacat gaaagtagat
     1921 tacgtcacgt ttagaaatgg tgaagaacag aagacctatg ggagatcaga taagatcgga
     1981 aaagctgtcg ttgacttggc acagccagta tttacaagat atatggaagg aattgaaaca
     2041 gcaaatatca caacggcaca agaagaatta aaagccatcg acttaattga ggcaccaaaa
     2101 caaaattgcc cgaaagagga ataacaaaca tggtaacagt taaaggaaat ggatcagatg
     2161 tttctaagta tgaacagtta acaaaccttt ttgtcagaga tcttcctgaa caattgaatg
     2221 agctcgaaag aaaactcacg tttgcctatg cggatcatgt tcgtgcgcat gcaggaaaag
     2281 aaggtgcagg tcttggtggt gtcctatatg atattgcaaa aaaacaaatt cgtgcctcat
     2341 tgtttcagga caagccatac agtgacgaaa atgcagaagc agttattgac gattatgtga
     2401 gtggagcttt gggtatcgaa cgggaaggat tagaagcaca gctaaatgga atcttacggg
     2461 taccacccgc tattgtacac cagattcata aaggaatggt tgaaggagta caaaagctta
     2521 ccttgcaagt tattggaaaa cgcatcaagc gtttctcaac tgaagagaca gtgcctttcc
     2581 ggcaatatct ccttgaactt gcaaagaaga tgggcaggga acgtccaagt aaggaagatc
     2641 tcctgacgct cgacgtgatg aggcaagtgt acatcgaaga cctccttcaa aattacttgg
     2701 gtttcattgg tgaacaggcg cagaaagaag ctcagcgtaa gcatagtgaa atgcgatata
     2761 aataattctt ttattttttt acagaagcgc atcttataaa actatttttt ctcttttcta
     2821 ataaagtgat ccatctcttt cacaaatatt tccgctttct ttttgtaccg ctcgtactct
     2881 tgcccactaa cgcgtttttt acttctgctc gtgattgctt tgaatagtgc atagagttct
     2941 tccatcgttc ggacagactg gaaagaaatt tttttctctt tgatcaaagt ttcacgcata
     3001 atttctgcca catgttcggg actcggcggc acttccccgt ggtgcatcag tgcagcatgc
     3061 gcagcgtcaa taacggacca gtacaagtca atagttgcac tcataagatg atcctctgca
     3121 cgtgcaaggc ttcgtggtgc catggaatag tacattgcaa tagactctgg cgttggtcgt
     3181 attctccctt gatctaggag catttgtaac gggtcaaaga accccgtgtc aatcaacgca
     3241 ataccatatc ggagaatgtt tgtcgcaaca gggtcgcccg cacgcacata ttcccagaag
     3301 ctcgtgaact tcattgactg aatatgcaat cggtctttgt tcgtgtctgc gataactttt
     3361 tgcgtgataa tgcgatacgt ctgcacgata tcttccgtga actgtatgcg tacatcatca
     3421 agtatcacaa gaatatcgat atcgccagtc ttagcttttc cctttgccgc gctcccaaaa
     3481 acaacgatag cgcggataaa ttcaccgaat tctttgtaga gtcgtgatgc aaactctttt
     3541 gcaaggataa aatcttcctg ctggtactgt cttgtaattt cccttggttc gttataatgg
     3601 atttgaaatt tcatgatctc cctctttttt attcaattgg cgcttcagag tagccccata
     3661 gttgccagtc tttgcccatg gcagtagcgt attttcctac ggaaaggaac ggcgagcttg
     3721 ccctgccaaa gtatccccct gtctcaagtt cgctccatcg cggtccaaca ccctcaacac
     3781 tatatattgg tgagcgcgca agttcagccc atgcggcaag cgttgcacct gaaggttcat
     3841 ctggaccttg tgctccccat tcaataacca agtctccttc atatttctta tcttttagga
     3901 cttttaaaaa ttcccggata ggtgcattcc ctcctccaat atttaagtgc tcgtcaaagt
     3961 atccgaagtt gtctgacatg tggacatgcc cgatgatgtt atctttttgt aactctccaa
     4021 cttttccaag caaccatttg tcaaactcct ttttcttttc atcaggggta agtttaggat
     4081 ctgattcaaa gtattttgcg agcgtgttag cgtgtgcgat gtcgaatgtt gccttgatat
     4141 gatcttctgc gattttcttc gcctcatttt tgctcgttcc ttttttcaca agctgttctg
     4201 tcatttcctt tcgtgacgct tgaatcaagt cccgaagctc atcagggtgc gcaccatagc
     4261 cccactctgc gaacaagttt tccggcgaaa caaacagcga ttttttcaat cctttttgtt
     4321 tttcaagttg atatgcatag atcgcagctt ctgcaaacgc ttttgcggac cgttcgagcc
     4381 caacagtttc aatgtgatca acagatgcat aggttttttc aagttctttc ctgtgccgct
     4441 ggagtccgac atatccttct ctgaattttc gtgcttcgcg ttcaattcta ttt
//
LOCUS       DATDZU010000035         3535 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1717505, whole genome shotgun sequence.
ACCESSION   DATDZU010000035 DATDZU010000000
VERSION     DATDZU010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3535
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1717505"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..122
                     /gene="rrf"
                     /locus_tag="VJJ79_01130"
     rRNA            6..122
                     /gene="rrf"
                     /locus_tag="VJJ79_01130"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(187..1383)
                     /gene="metK"
                     /locus_tag="VJJ79_01135"
     CDS             complement(187..1383)
                     /gene="metK"
                     /locus_tag="VJJ79_01135"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HLC22356.1"
                     /translation="MTEKELFTSESVTEGHPDKLCDQISDAVLDACLAQDPESRVACE
                     TLAKNSLILIAGEVTTRANVDFSEVARQTIKGIGYTKTSQGLAWDSCDILVHMTRQSP
                     DISVGVTASESKEQGAGDQGLMFGYACNETPEFMPLPIHLAHRLAEQLARVRKDPSSG
                     LQYLGPDGKSQVTVEYRNGKPFRLETVVISNQHEADVPQDFLRAQVLEYVIKPIVGDI
                     IGTNVYINPTGSFVLGGPRADAGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAA
                     YAARYIAKNIVAANLADRCEVQLAYAIGIAEPISVYVNTFGTGRVPTESLTRLVRDHF
                     PLKPGDIIRELDLKRPIYQKTAAYGHFGREDPDFTWERTDKADMLRTAAEGSHSHKEI
                     DLGGEG"
     gene            1524..2711
                     /locus_tag="VJJ79_01140"
     CDS             1524..2711
                     /locus_tag="VJJ79_01140"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLC22357.1"
                     /translation="MLFAHFSDCHIGGWKEEKLRHLNMECFREAVRVILSRHVDFVLI
                     AGDLFNTALPQIDYIKDVAGELKKFLDAGVPVYMIAGSHDYSPSGKTMLDVLEKAGLI
                     INVMKFDEKNNLLFTIDPKTGAKITGMYGKKGGLEISEYQLLDTKPLEAEDGFKIFMF
                     HTAINEFKPAGLEEMNGADAAALPNNFQYYAGGHVHYIFQKAFGNGVLTFPGALFPNN
                     FKELEEWQRGGVYFVDENVRWEYVPIHLKKVQTFAIDVSEHTPEQATEKILETVKAVP
                     VSDAIVTLRIVGDIEGKTSDVDFEEIFLQIPDAYIVLKNTAKLGSKILKKIGVKQGTV
                     EEIEHAILQEVKTDTSLKDIDENFTKKLMNILSRERGEGEKVSDFEHRIVSEVWGVLN
                     LEN"
     gene            2701..>3535
                     /locus_tag="VJJ79_01145"
     CDS             2701..>3535
                     /locus_tag="VJJ79_01145"
                     /inference="COORDINATES: protein motif:HMM:NF024573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HLC22358.1"
                     /translation="MRINTVHLENIRSYVSQEIVFPSGSVLLWGNIGSGKSSILLAID
                     FALFGLQGDTLSGATLLRNGTENGSVTLSFTIDGKDIVVHRKLKRTKNSVVQDAGYVL
                     RDGIREEKTAIELKQQIIDILHYPKDILTKNKDIIYRYTVYTPQEEMKRILLGSKEER
                     LNTLRKVFGIDKYKQIRDNTKIVIAHSREKKQMYEGMVADLPEKIVEREIKEQDILKI
                     QEAMRLLLPLLEEKIKVVEQKKAGVTLFEKQREAAQQIKRELAVSASRCFSKRVTPAF
                     FC"
BASE COUNT         1001 a          779 c          805 g          950 t
ORIGIN      
        1 ctatcgtgag cggccatagg gacctggacc cacctgttcc catttcgaac acagcagtga
       61 aataggtcga cgttccgttg cggtactgca tttaatgcgg gaggctcgga tcgctgctcc
      121 acctttttat tcctttttat gtgcatctct taagaagaaa ataaaaagat tattgttctc
      181 aagatattat ccttcaccgc cgagatctat ctccttatga gaatgacttc cttccgctgc
      241 cgttcgaagc atatctgctt tatctgttcg ctcccatgta aagtcaggat cttctctgcc
      301 gaaatgcccg tatgccgcag tcttttggta gattggacgc ttcaagtcta attcacgaat
      361 aatgtctcct ggtttcaacg ggaaatggtc acggacaagg cgagttaatg attctgttgg
      421 cacacgtcct gtcccaaacg tattgacgta tacggaaata ggctctgcga tgccaatcgc
      481 ataggcaagc tgcacttcac agcgatctgc aagatttgca gcaacaatgt tttttgcaat
      541 ataccttgct gcgtatgctg cggacctatc cacttttgat ggatctttcc ctgaaaatgc
      601 accgccgcca tgccgaccca tgcctccgta cgtgtccacg ataattttcc gacccgtgag
      661 ccctgcgtct gcacgtgggc caccaagcac aaaagagcct gtagggttaa tgtacacgtt
      721 cgtgccaata atgtcgccaa caattggttt aattacgtat tccaaaactt gggctcgaag
      781 aaaatcctga ggaacatctg cttcatgttg gtttgaaatc accactgttt caagtcgaaa
      841 tggttttccg ttccgatact caaccgtcac ctgcgacttt ccatctggtc ctaggtattg
      901 taaccctgat gaaggatctt tccgcaccct cgccagttgt tctgccaatc gatgcgccaa
      961 gtgaatcgga agcggcatga actcgggcgt ttcattgcag gcgtagccga acattaatcc
     1021 ttggtcgcct gctccctgtt ctttgctctc ggatgctgtg acgccgacag aaatgtctgg
     1081 ggactgcctt gtcatatgca cgagaatgtc acacgagtcc catgcgagac cttgcgatgt
     1141 ttttgtatat ccgatacctt taattgtctg ccgcgcaacc tcactaaaat caacgttcgc
     1201 tcgcgtcgta acttctcccg ctataagaat caagctgttc tttgccaacg tctcgcatgc
     1261 aacccgtgat tcaggatcct gcgcaaggca agcgtcaagc actgcgtcac taatctggtc
     1321 acaaagtttg tccggatgcc cttctgttac ggactcagat gtaaaaagtt ctttttctgt
     1381 catgatatca ccttcgcttc ttcttatact acgggccttt aaaaaaattg ttaaggagtt
     1441 ttcttctgta gggatgaata gactggaata tagctaacaa gttaatggaa actatattaa
     1501 gcacattttc caggaaaagt tctatgctct ttgcccattt ctctgactgc cacatcggcg
     1561 gatggaagga agaaaagcta cggcacttga acatggaatg tttccgtgaa gcggtgcgcg
     1621 tgattctttc ccggcacgtt gactttgtgc tcattgcagg ggatttattc aacactgcac
     1681 tgcctcagat agattacatc aaagatgtcg ctggtgaact gaaaaagttt ctcgatgcag
     1741 gcgttcccgt gtacatgatt gcggggtcgc atgattattc tcccagtgga aaaacaatgc
     1801 tggatgtcct ggaaaaggct gggcttatca tcaacgttat gaagtttgat gaaaaaaata
     1861 atttactttt cacgatcgat ccgaaaacag gagcaaagat tacgggcatg tacggaaaaa
     1921 aaggcgggtt ggaaatctcc gagtatcaac tgcttgacac gaaaccgctg gaagcagaag
     1981 acgggttcaa gatttttatg tttcatactg caatcaacga gttcaaaccc gcaggactgg
     2041 aagaaatgaa cggtgctgat gctgctgcat tgccaaataa tttccagtat tacgccggcg
     2101 ggcacgtgca ttacattttt cagaaagcgt ttggaaacgg ggtgctgacg ttccctggcg
     2161 cattgtttcc caataatttt aaagaactcg aagaatggca acggggcggc gtctattttg
     2221 ttgacgagaa tgtgcgttgg gaatacgtgc cgattcatct gaaaaaagta caaacatttg
     2281 ccattgacgt ctcagaacat acgccagaac aagcaacaga aaaaatactt gaaacggtta
     2341 aagctgtgcc tgtcagcgat gcaatcgtta cattacgtat cgttggagac atcgaaggaa
     2401 aaacgagcga tgtcgatttt gaagaaattt ttctgcagat ccctgatgca tatattgttc
     2461 tcaagaacac tgcaaagctg ggttctaaaa tcctaaaaaa aattggtgtc aagcaaggga
     2521 cggttgaaga aatcgagcat gctatcctcc aagaggtaaa aactgatact tccttgaaag
     2581 acatcgacga gaattttaca aaaaagctca tgaatattct ttcacgagaa cgtggcgagg
     2641 gagaaaaagt atcggacttc gaacaccgaa ttgtttcaga agtgtgggga gtattgaacc
     2701 ttgagaatta atactgttca tctcgagaat attcgaagct atgtctcgca agagattgtt
     2761 tttcctagtg gcagcgtttt gctctgggga aatatcggct cgggaaaaag cagtattctt
     2821 cttgccattg actttgcgct atttggactc cagggtgata ccctttccgg tgcaactctc
     2881 ctgcgaaatg gtacagagaa tggaagcgtg actctttctt ttaccattga tggaaaagat
     2941 atcgttgtgc acagaaaact taagcgaaca aagaattcag tggtacaaga tgccgggtat
     3001 gtccttcgcg atggtattag ggaagaaaag actgccattg agctcaagca acagatcatt
     3061 gacattttgc attatccaaa agatattctg acaaagaaca aagatatcat ctatcgctat
     3121 acggtttaca cgccccagga agaaatgaaa cggattctcc ttggaagcaa ggaagaaaga
     3181 ctcaacacgc tgcgaaaagt atttggcatt gacaagtata aacaaatcag ggataatact
     3241 aaaatagtga ttgcgcattc acgcgaaaag aaacagatgt atgaaggaat ggttgctgac
     3301 cttcctgaaa aaattgtaga gagagaaata aaagaacagg atatccttaa gatacaagaa
     3361 gcgatgcgcc tccttctgcc gctgcttgaa gaaaaaataa aggttgttga acaaaaaaaa
     3421 gcaggggtta ctctcttcga gaaacagcgc gaggccgcac agcaaatcaa aagagagctt
     3481 gccgtatcgg cctcgcgctg tttctcgaag agagtaaccc ctgctttttt ttgtt
//
LOCUS       DATDZU010000036         3718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2374460, whole genome shotgun sequence.
ACCESSION   DATDZU010000036 DATDZU010000000
VERSION     DATDZU010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3718
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2374460"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VJJ79_01150"
     CDS             complement(<1..548)
                     /locus_tag="VJJ79_01150"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit alpha"
                     /protein_id="HLC22359.1"
                     /translation="MQEGQHQLMGYDRASTMFSPDGRLLQVEYAKEAVKQGSTAIGCV
                     CKDGVILIGDKRVKDELIVPESVQKIFQVDTHIGATATGYIMDGRVLIERAQLIAQQH
                     QVTYSVPIETFGLVKEVSDIKQSYTQYGGARPFGVSILFIGVDDEKPALYSTEPTGIF
                     FEYKATAVGEGADAVKEVLKKE"
     gene            complement(563..889)
                     /locus_tag="VJJ79_01155"
     CDS             complement(563..889)
                     /locus_tag="VJJ79_01155"
                     /inference="COORDINATES: protein motif:HMM:NF014013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030677 - ribonuclease P complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0001682 - tRNA 5'-leader removal [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rpp14/Pop5 family protein"
                     /protein_id="HLC22360.1"
                     /translation="MKLKPILPSLREKKRYIAFEVKTEENVDFNEVKTAIESAMKGFL
                     GDLGMAHAGAIFLPDWKNNHGIVRVNSNMVDHTKASLALVTHIAGQKATVHSVAVSGV
                     INKLRI"
     gene            1033..1746
                     /gene="dph5"
                     /locus_tag="VJJ79_01160"
     CDS             1033..1746
                     /gene="dph5"
                     /locus_tag="VJJ79_01160"
                     /EC_number="2.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004164 - diphthine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthine synthase"
                     /protein_id="HLC22361.1"
                     /translation="MLTLIGLGLNDEKDISIKGVGRVKSADYVYLEKYTSALQCSLED
                     LEKFYEKKVIPVEREFVEDGSVILDQATDHNVALLIVGDVFAATTHMALYLQAVEQGI
                     EVQVVYNASILTAVGITGLSLYKFGKTISVPFHETETVQLIKENYPLHTLCLLDLDPK
                     EKKFMEASDAITRLIQQGLDSETKIVVCAQLGSEKPMIFYTEAKNVLPLQKFPQCLVI
                     PGELHFMEEEALKFWRGKY"
     gene            1798..2004
                     /locus_tag="VJJ79_01165"
     CDS             1798..2004
                     /locus_tag="VJJ79_01165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HLC22362.1"
                     /translation="MKITMRVKPRSGRSKIEEENGTYRAYLRAAPEGGKANIELLKLA
                     RKYFKKPVRIVSGFTSKTKIIETF"
     gene            complement(1988..2422)
                     /locus_tag="VJJ79_01170"
     CDS             complement(1988..2422)
                     /locus_tag="VJJ79_01170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22363.1"
                     /translation="MLDALKTFLKEIGDVKGMYLVSCFLQNGAWQIDFYSEAKHKITT
                     YRKVEGALVAEEDDIFQAEEAPLEKLEIENVRVDFEDAVKKVSAERDKLITILQVIKG
                     KIVWNFTALTPTLHLYNLKVDAMTGNVISERDENIMNFRMSQ"
     gene            complement(2416..>3718)
                     /gene="thrS"
                     /locus_tag="VJJ79_01175"
     CDS             complement(2416..>3718)
                     /gene="thrS"
                     /locus_tag="VJJ79_01175"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HLC22364.1"
                     /translation="KNVQLQRIYGVAFETKEELDAHLKMLDDAEKYNHKKIGEEMELF
                     ALFDLVGKGLPVWLPKGEILRQEVEKLALEIESKANYVRVSTPHLARKELFEKSGHLP
                     YYAGSMYPPMHLDDGDYYLKAMNCPIHHLIFSRRVRSYRELPLRLAEYGTVYRNELSG
                     TLVGLLRVRSLRMNDAHIYCTKEQIEGEVGHVLAMIKKYFELFGFKDFWFRLSLHDPA
                     NKDKYIDEPENWTYAEAALKEVLKKLKLTYIEATGEAAFYGPKIDVQFKNLYGREETL
                     STVQLDFAAKTKFNLHYDDATGKQNQEVFVIHRAPLSTHERFIAFLIEHYRGKFPLWL
                     SPLQVKLVTVTERNNAFAETIALQIKEKGIRAEVDGRNESIGKKVRDAIVERVNYIAT
                     IGDKEMENSCLAIRDRDGNVERDVKVDTFMERLMDEMQRRC"
BASE COUNT          995 a          852 c          732 g         1139 t
ORIGIN      
        1 tattcttttt tcaacacttc tttgacagca tctgctcctt ctccaacggc agttgccttg
       61 tactcgaaaa agattcctgt tggttctgtg gaatagaggg caggtttttc atcgtcaaca
      121 cctatgaaca agatagagac accaaatgga cgtgcgccac catattgtgt atacgattgt
      181 ttgatatcag atacttcttt caccagccca aacgtttcaa ttggaacaga atatgtgact
      241 tgatgctgct gtgcaatcaa ttgtgcacgt tcaattaaca cccgtccgtc catgatataa
      301 ccagttgctg ttgcgccgat atgcgtatcc acctgaaaaa ttttttggac ggattctgga
      361 acaataagtt cgtctttcac tcgtttgtct ccgatgagaa taacaccgtc tttacagacg
      421 caaccgattg cagtcgatcc ttgttttact gcttcctttg catactcgac ttgcagtaac
      481 cgcccatctg ggctgaacat agtacttgca cggtcgtacc ccataagttg atgttgtcct
      541 tcttgcatga tatattccct ccttagatcc tgagtttgtt tatgacacca gaaacggcaa
      601 cgctatgtac tgttgctttc tgacctgcga tgtgtgtgac gagagcaaga gacgctttgg
      661 tatgatctac catgttgcta ttgacacgca caatgccatg attatttttc cagtcaggga
      721 gaaaaatagc gcccgcgtgt gccattccga ggtccccaag gaaccctttc atagcacttt
      781 caatggcagt tttcacttca ttaaagtcca cattttcttc cgtttttact tcgaaagcaa
      841 tataccgttt cttttcccgt aaactaggca aaattggctt caatttcatt gttaaccaga
      901 gaataatccc attctcgttt ctcttctctt tccgttgatt tagtaaaatt ccgcccttta
      961 tatagctttt gctagtgctt tatggagaat gaatgggatg atttataaac tgtacttatc
     1021 cctccgaagc caatgctcac attaattgga ctcggtctga acgacgaaaa ggacatctcg
     1081 ataaaaggag tagggcgtgt taagagtgca gactatgttt atctcgaaaa gtacacctct
     1141 gcattacaat gttctctcga agacttggaa aaattctacg aaaaaaaagt tattcctgtg
     1201 gaacgagagt ttgtcgaaga cggttctgtg atactcgatc aagcaacgga tcacaatgtg
     1261 gcacttctta ttgtcggcga cgtgtttgcg gcaaccacgc acatggcact ctaccttcaa
     1321 gcagtagaac aaggaattga agtacaagtc gtgtacaacg cctcgattct cactgcagtg
     1381 ggaataacag gattatcgtt gtacaagttt ggaaaaacaa tctcggtgcc attccacgag
     1441 acagaaacag tacagttgat aaaagaaaat tatccgttgc atacgctgtg tttgctcgac
     1501 cttgatccaa aggaaaaaaa gtttatggag gcatcggatg caattacgcg attgatacag
     1561 caaggattag attcagaaac aaagatagtt gtctgtgcgc agctcggctc agaaaagccg
     1621 atgatatttt atacagaagc aaagaacgtt ctccctttac aaaaattccc gcagtgcctc
     1681 gtcattccag gagaattgca ttttatggaa gaagaagcct tgaaattctg gcgtggaaaa
     1741 tattaaatat atattcccct tctgcaaata gatggcactt ctgggtagga tcatacaatg
     1801 aaaatcacga tgcgcgtcaa accgcgttct ggtcgttcta aaatagagga agaaaatgga
     1861 acatatcgtg cgtatcttcg tgcagcgcca gaaggtggaa aagcaaacat tgaacttctc
     1921 aagctcgcac gaaaatattt taaaaaacca gtacgtatcg tttcaggatt taccagcaaa
     1981 accaaaatta ttgagacatt ctaaagttca ttatgttctc atcgcgttcg ctgataacat
     2041 taccggtcat cgcgtcgact ttcagattat agaggtgcag cgtcggtgtc aaggcagtaa
     2101 agttccagac aatctttcct ttgattactt gcagaatcgt aatcagttta tcgcgttcag
     2161 cagaaacttt tttcacagca tcttcaaaat caacgcgcac attttcaatt tcaagttttt
     2221 ctaacggggc ttcctctgct tgaaaaatat catcttcttc agcgacaagt gctccctcaa
     2281 cttttctgta cgttgtaatt ttgtgttttg cttcagaata aaaatcgatt tgccatgctc
     2341 cattttgcaa aaaacaagaa accaagtaca ttcctttaac atctccaatc tctttcagaa
     2401 acgttttgag tgcatctagc atcgtcgttg catttcgtcc ataagccgtt ccataaatgt
     2461 gtctactttc acatcgcgct cgacgtttcc gtccctgtca cggatggcaa ggcaagagtt
     2521 ttccatttct ttatcaccaa tagtcgcaat ataattaacg cgctcaacaa tagcgtccct
     2581 aacttttttc ccaatgcttt catttcgtcc gtcaacttcg gcgcgtatcc ctttttcctt
     2641 aatctgcagc gcaatggttt ctgcaaacgc attgtttctt tccgtcacgg tcaccagctt
     2701 cacttgtaag gggctgagcc agagcggaaa cttgcctcgg taatgttcaa ttaggaacgc
     2761 gatgaatcgt tcatgagtac tcaatggtgc acggtggatc acgaacactt cctggttttg
     2821 ttttcctgtt gcgtcatcat agtgcaggtt aaattttgtt tttgctgcaa agtctaattg
     2881 taccgtcgag agcgtttctt ctctgccata gagatttttg aactgcacat cgatcttagg
     2941 accatagaac gcagcttcgc ctgttgcttc aatatacgtt aactttaatt ttttcaaaac
     3001 ctccttgagt gctgcttcag cgtacgtcca gttctcaggc tcgtcgatgt acttgtcttt
     3061 gtttgcaggg tcatggagag acaacctaaa ccagaaatct ttgaacccaa agagctcaaa
     3121 atattttttg atcatggcta gaacatgtcc cacttctcct tcaatttgtt ctttagtgca
     3181 ataaatatgt gcgtcgttca tgcgaaggct acgaacacgg agcaatccaa ccaatgtccc
     3241 ggagagttca tttctataca ctgttccata ctctgcaagc cgcaacggca attctcggta
     3301 gctgcgtacg cgtctagaga aaatcaagtg atggatcggg caattcattg ctttcaaata
     3361 ataatcccca tcatccaagt gcattggcgg gtacatgctt cctgcgtagt acggcaagtg
     3421 cccagatttt tcaaacagct ctttccgtgc aaggtgcggt gtcgagacgc gaacatagtt
     3481 agctttagat tctatttcta gagcaagctt ttccacttct tgtcggagga tttctccctt
     3541 gggcaaccac accggtaacc cttttcccac gagatcaaat agcgcaaata gttccatttc
     3601 ctctcctatt tttttgtgat tatacttctc tgcatcgtcc agcattttca ggtgtgcatc
     3661 gagttcttct tttgtttcaa acgcaacgcc gtagattcgc tgcagctgta catttttc
//
LOCUS       DATDZU010000037         2241 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_901709, whole genome shotgun sequence.
ACCESSION   DATDZU010000037 DATDZU010000000
VERSION     DATDZU010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901709"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VJJ79_01180"
     CDS             <1..464
                     /locus_tag="VJJ79_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22365.1"
                     /translation="TGLNSINLGEVSIDNGTPRSSFNVIYTLLAVLFLGGVSYVGYKR
                     LQPKKQKKQESVAQERPAKKQKTENKVAPKKPSLTFEDRKVSIEDFKKRTLEEIRKTE
                     EKIKQKEAGKYSPMMNDGKIGYVTGRRDPVQPSDESNEKQEKSVFSLFDDE"
     gene            complement(435..890)
                     /locus_tag="VJJ79_01185"
     CDS             complement(435..890)
                     /locus_tag="VJJ79_01185"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLC22366.1"
                     /translation="MYDVLAPGYDELYREEQEKKLALIAHVIKGNVLDIGAGTGIVAR
                     HFPNVVSLDPSPEMLAYAPGEKIVGSAEAIPFPSGRFDTIVSLTALHHCNIDKVITEL
                     QRLQPKNMAFTILKKSQKCQEIVEKLQMAFGMDIIDEEKDLLVIKETKD"
     gene            972..1466
                     /gene="dcd"
                     /locus_tag="VJJ79_01190"
     CDS             972..1466
                     /gene="dcd"
                     /locus_tag="VJJ79_01190"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR02274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HLC22367.1"
                     /translation="MILTRKEVLREIHAGRIKVTPFFAKNIGPTSLDLTLSNEFRSFH
                     PFQKISVSENTDYKKLTQKRKVRELVLEPGAFVLGITKENIQLPDDIAGILSGRSRFA
                     RLGILVHATAAFVHPGVNNHQVLEITNVSQNTLVLKPGTKIAQLVFVRTEGKAMYQGK
                     FQRQ"
     gene            1541..1831
                     /locus_tag="VJJ79_01195"
     CDS             1541..1831
                     /locus_tag="VJJ79_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22368.1"
                     /translation="MRIQNTIAFYFARILELERTEPYLYFVDPLAKQLYVEELSKVYE
                     ILYDRIMTAKISYFVKRDIESWFVYNKEYFGVLSLEQLNKELQDILRRSDLI"
     gene            complement(1808..>2241)
                     /locus_tag="VJJ79_01200"
     CDS             complement(1808..>2241)
                     /locus_tag="VJJ79_01200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR00269 family protein"
                     /protein_id="HLC22369.1"
                     /translation="LDDEAQSILMNQFRSNMETSARLGPLTGVKDREGFIRRIKPLYF
                     MTEKEVMTYAFLKNITDDFRECPYNKDSYRNQVREMLNKFEDLYPGTKHSVVQSFMEI
                     LPALKEKYKGDVPIKSCKKCGEPTSRDLCQKCVVLDQIRSS"
BASE COUNT          654 a          452 c          515 g          620 t
ORIGIN      
        1 ctacagggtt gaattccatc aatcttggcg aagtgtcgat tgacaacggt acgccacgtt
       61 cgtcttttaa tgtcatatac acactgcttg ctgttctttt cctcggaggg gtaagttatg
      121 ttggttacaa acgcttgcag ccaaagaaac aaaagaaaca ggagtcagtt gcacaggaac
      181 gaccagctaa gaaacaaaaa acagaaaata aagtagcgcc aaagaaacct tccttgacat
      241 tcgaagatag aaaagtaagc atcgaagatt tcaagaaacg gactctagag gaaatccgga
      301 agactgaaga aaaaattaaa cagaaggaag caggaaaata ttcacctatg atgaatgacg
      361 gaaagatcgg gtatgttact ggaaggagag atccagtaca gccttcagat gagtcaaatg
      421 aaaagcaaga aaaatcagtc tttagtctct ttgatgacga gtaaatcttt ttcttcgtcg
      481 ataatgtcca tgccaaatgc catttgtaac ttttccacaa tttcctgaca cttctggctt
      541 tttttgagga ttgtaaatgc catgttcttt ggctgcagcc gctggagttc tgtaatgacc
      601 ttatcaatgt tacaatggtg cagtgcggtg agggagacta tcgtgtcaaa tcttcctgag
      661 ggaaatggaa ttgcttctgc gctgccaacg attttttctc ccggagcata tgcaagcatt
      721 tctggggaag gatcgagaga gacaacgttg ggaaaatgcc gagcaacaat gcctgtccct
      781 gcacctatat caagaacgtt tcctttgatc acatgtgcaa taagggcgag ttttttttct
      841 tgttcttcac gatagagctc atcatagcca ggcgcaagga catcgtacat agaaaaaata
      901 tgcgtcaatg atgctttata aacctgctgg gcgaaaaact cttaagcaag cgaaacagtg
      961 taaagaatat aatgatctta accagaaaag aagtgttgcg agagatccac gcaggaagaa
     1021 taaaggtcac gccatttttc gcaaaaaata tcggaccaac atcattagat ctaacattga
     1081 gcaatgagtt taggtctttt catccgttcc aaaaaatttc tgtgtctgaa aacactgact
     1141 ataagaagtt gacgcagaag agaaaagtac gcgagctcgt gctggagcct ggcgcatttg
     1201 tgctagggat aacaaaagaa aatatccagt taccagatga cattgcaggg attctttcag
     1261 gtcgctcccg ctttgcacgt ttaggaattc ttgtccacgc aacggcagcc tttgtccatc
     1321 ctggcgtgaa caatcatcag gtgctggaaa tcacgaacgt ttctcagaat acgttagtcc
     1381 taaaaccagg aacaaagatt gcacagcttg tttttgtgcg tacagaaggg aaggcaatgt
     1441 accagggaaa gtttcagagg cagtaattct atcgacttta ttgaaatctt ttcggttttt
     1501 ctttagcaac attttttaag cgttagtaga agagatgtgc atgcgcatcc aaaataccat
     1561 tgccttttat tttgcacgaa tccttgagct tgaacggaca gagccgtacc tctattttgt
     1621 tgaccctctg gcaaaacaac tatacgtgga agaactcagc aaagtgtacg agatattgta
     1681 tgaccgtata atgaccgcaa aaatcagcta ctttgtcaag cgtgacatcg agtcttggtt
     1741 tgtgtacaac aaagaatact ttggcgttct atctttggaa cagttgaaca aagaactgca
     1801 agatatttta agacgatcgg atctgatcta ggacgacaca tttctggcag aggtctcgtg
     1861 acgtcggctc gccgcatttt ttgcagctct tgatgggcac gtctccctta tacttttctt
     1921 tcagagcggg aagaatttcc atgaacgatt gcacaacgga atgtttcgtg ccggggtaca
     1981 ggtcttcgaa tttgttcagc atttctcgta cttggtttcg gtagctgtct ttgttgtacg
     2041 ggcactcgcg gaaatcgtcg gtaatatttt tgaggaacgc gtaggtcata acttcttttt
     2101 ctgtcataaa gtacagtggc ttgattctcc ggatgaaccc ctcacggtcc tttacgccgg
     2161 tgagcggacc gaggcgcgcg gacgtttcca tgttgcttcg aaactggttc ataaggatgc
     2221 tttgtgcttc gtcgtcgagg t
//
LOCUS       DATDZU010000038         2242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2236833, whole genome shotgun sequence.
ACCESSION   DATDZU010000038 DATDZU010000000
VERSION     DATDZU010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2236833"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VJJ79_01205"
     CDS             <1..300
                     /locus_tag="VJJ79_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014012453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HLC22370.1"
                     /translation="QFTLACDRNSARVAKWYDEMHPAVQRQIHKVIQTCKKYHVETSI
                     CGQAGSRPEMAKFLFSEGIYSISANLDAVSTIRKTVAQFEGLLKKGGNGDGKKKS"
     gene            281..493
                     /locus_tag="VJJ79_01210"
     CDS             281..493
                     /locus_tag="VJJ79_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22371.1"
                     /translation="MAKRRAKKETSPMVCMPGGKKDWAHTILAAMVIVFAVLRESGMP
                     WAYWVVLIAAVVIFLSGVLSCCRKVL"
     gene            complement(496..900)
                     /locus_tag="VJJ79_01215"
     CDS             complement(496..900)
                     /locus_tag="VJJ79_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22372.1"
                     /translation="MKPIITRMTMEVIGAPKEHVEKALKEVLRKLKEEKEISVIKIEA
                     YECQQMENKLWSTFADIEFKTETLKRVLDICYDYMPGNIEILEPAGIEMDCNDFANVI
                     NDFLVRLHKYAFVLKKLKTENIYMMKELEKKE"
     gene            complement(942..1220)
                     /locus_tag="VJJ79_01220"
     CDS             complement(942..1220)
                     /locus_tag="VJJ79_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22373.1"
                     /translation="MQSTIDLQEYEMFPYIDQLLKEERFDEVSHILKSTDIANTSTDL
                     LIGYLCITLAAHDKLPYRDLFFQKTKEELFRQGEDAEKILSNLEGKIQ"
     gene            complement(1235..1492)
                     /locus_tag="VJJ79_01225"
     CDS             complement(1235..1492)
                     /locus_tag="VJJ79_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22374.1"
                     /translation="MILEAALMGLLGGTARAAVGLLKAMRTNVKIVWPYALLTICCSA
                     IVGVTAGIIFDSDLKISLIAGYAGTDLLENVYKIIFRRLII"
     gene            complement(1516..1743)
                     /locus_tag="VJJ79_01230"
     CDS             complement(1516..1743)
                     /locus_tag="VJJ79_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22375.1"
                     /translation="MAKKVLKRNGNEKLKRYLKWVVIFALEVLGLATLAQGFGLQLAT
                     GVLYYGIAHYAVGILLLGIGWRMKMDIKSLK"
     gene            complement(1816..2058)
                     /locus_tag="VJJ79_01235"
     CDS             complement(1816..2058)
                     /locus_tag="VJJ79_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014451717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HLC22376.1"
                     /translation="MAEHKVTVYSTPTCPYCVKVKEFLKEHHVKYTEIDVASDRAKAE
                     EMIEKSGQMGVPVTEVDKTIIVGYDVPKLKKALGLK"
     gene            complement(2004..>2242)
                     /locus_tag="VJJ79_01240"
     CDS             complement(2004..>2242)
                     /locus_tag="VJJ79_01240"
                     /inference="COORDINATES: protein motif:HMM:NF018964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1461 domain-containing protein"
                     /protein_id="HLC22377.1"
                     /translation="FTAFHELVFMNDYWLLPADSTLLQLFPESFFVTATEQIILYSGT
                     FSILCIAWGLRIPGNKKWQNTKLPSIQHRRARTA"
BASE COUNT          602 a          464 c          447 g          729 t
ORIGIN      
        1 cagtttactt tggcgtgtga ccgaaactct gcgcgcgtgg ccaagtggta cgatgagatg
       61 catcccgcag tgcagcggca gatccataaa gtaatccaga cctgtaaaaa gtatcacgtg
      121 gaaacttcta tctgtggtca agctggttcg cgtccagaaa tggcaaagtt tttattctct
      181 gaaggtatat actctatatc agcaaacctt gatgcagtct ccacgattag gaaaactgtt
      241 gcgcagtttg aggggttgtt gaagaaagga ggaaatggtg atggcaaaaa gaagagctaa
      301 aaaagagacg tccccaatgg tctgcatgcc cggagggaaa aaagactggg cacatacgat
      361 tcttgcagcg atggtgattg tatttgctgt tcttagagaa tccgggatgc catgggcata
      421 ctgggtcgtg cttattgcgg cagtggtgat atttctctct ggtgtgttaa gctgttgcag
      481 aaaagtactg taattttatt ctttcttttc taattccttc atcatataga tattttccgt
      541 ttttaatttc ttgagcacga acgcgtactt gtggagcctt actaggaaat cgttgatgac
      601 attagcgaaa tcgttgcagt ccatttctat gcctgctggt tctaatattt caatgttgcc
      661 gggcatgtaa tcgtaacaga tatctaggac gcgcttaagt gtctctgtct tgaattcaat
      721 gtctgcaaac gtgctccaga gcttattttc catctgctgg cattcatatg cttctatctt
      781 aatgacagaa atctcttttt cttcttttag ctttcgaaga acttccttca gcgctttctc
      841 tacatgctct tttggagcgc caataacttc catcgtcatc cgagtgataa tgggtttcat
      901 ttttatagga aaatattaat agtcatttat aacggtttcc tttattgtat cttcccttct
      961 aggttggaga gtatcttctc tgcgtcctcc ccttgacgga aaagttcttc ttttgttttt
     1021 tgaaaaaata aatctctgta tggaagctta tcgtgtgcag ctagtgtgat acacaagtat
     1081 ccaattaaaa ggtcagtaga tgtatttgct atgtcagtgc tttttaagat atggcttacc
     1141 tcgtcaaatc tttcctcttt tagaagctgg tcaatatatg ggaacatctc gtattcttgt
     1201 aaatcaatcg tactttgcat ttcttgtctt ccttttagat aataagtctt ctaaaaatga
     1261 tcttgtacac gttttccagt aggtctgtcc ccgcatagcc agcgattaaa ctaattttca
     1321 agtcagaatc aaaaataata ccagcggtta cgccaactat tgctgaacaa caaatcgtta
     1381 ggagtgcata aggccagaca atctttacat tggtgcgcat tgccttgagt aaccctactg
     1441 ctgcacgcgc tgtcccgcca agaagcccca tcaatgctgc ttcaagaatc atagtgagaa
     1501 aaaaagagaa ataaactatt taagactttt gatgtccatt ttcatacgcc agccaatgcc
     1561 taataacaat atacccacgg cgtaatgcgc tattccataa tagagaaccc ctgtcgctaa
     1621 ctgcaaacca aatccctgtg ccaatgttgc aagaccaaga acttctaatg cgaaaataac
     1681 aacccactta agatatcgct tgagcttttc attcccattt cgtttcagaa ctttttttgc
     1741 cattaactat cacctctcta tagaatacaa agtagtcatt ctttttaaac ttttttgtta
     1801 tctagttcac aatatttact ttagacccag tgcttttttt aattttggaa cgtcatagcc
     1861 cacaataata gttttatcga cttcagtgac agggacgccc atttggcctg acttttcaat
     1921 catttcttcg gcttttgctc ggtcactggc gacgtcaatc tctgtgtatt tcacgtgatg
     1981 ttcttttaga aattccttga ctttcacgca gtacgggcac gtcggtgttg aatagacggt
     2041 aactttgtgt tctgccattt tttatttccc gggatacgca atccccatgc aatgcagagg
     2101 atagagaacg ttccgctata taaaattatt tgttctgttg ctgtgacaaa aaatgattct
     2161 ggaaaaagct ggagtaatgt gctgtccgct ggcaggagcc aatagtcgtt cataaaaact
     2221 agttcgtgaa acgcggtgaa gg
//
LOCUS       DATDZU010000039         3308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2274323, whole genome shotgun sequence.
ACCESSION   DATDZU010000039 DATDZU010000000
VERSION     DATDZU010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2274323"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VJJ79_01245"
     CDS             <1..857
                     /locus_tag="VJJ79_01245"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HLC22378.1"
                     /translation="PLTKKKYIVWPTYDFETVIGEEIAGVTHILRSNEFGLMRVELQN
                     YIKDLLGFKKQDVIQYGRFNVIGAETQGRVIREMIEKKEVTGWDDPRLVTIMALRRRG
                     IVPGTLHELAIDVGLSSTETNLDWSMIAAINRKIIDPVTKRYFVVKKPKKIKIEHPLK
                     TVDVPLHPQNKKLGKKHVALGDTFYVSDPVEKGNVYRFMHMFNFKDGKFISEEYDHSL
                     GAKIIHAIPAHDALDVRVLMNDGSIIEGKGEKALKELKDGEIVQFERMFFCRLDDKEK
                     MLFVYAHP"
     gene            complement(848..1225)
                     /locus_tag="VJJ79_01250"
     CDS             complement(848..1225)
                     /locus_tag="VJJ79_01250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22379.1"
                     /translation="MNPKKAPLSALLGVEETVTRSEISLTPKTGKVLLAAILVGAVEE
                     MQKYVRNGRKTRHYSPKYYRVKAWMDSDVHDGPFDFSWICSKLKREPEYVRRIAYNPG
                     RKMYHAIPQNDDDENDLEKKLQG"
     gene            1462..2064
                     /locus_tag="VJJ79_01255"
     CDS             1462..2064
                     /locus_tag="VJJ79_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004055587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22380.1"
                     /translation="MRLTFSRIELNDLAKAWIIISLAFAIVLSDGILGLSLLSNVLLA
                     ALTVGTGFLLHELGHKVIAQRYGCWAEFRADSYMLLLAIVTSFFGIVFAAPGAVMIAG
                     RVSKMRNGLISLAGPAVNIVLAFMFLGLSFIFSNGFLGNVTVFGYIINSWLAIFNLIP
                     IWILDGKKVFDWNKIVWGVALSLALSLFFLKGIMPLPTLS"
     gene            2103..>3308
                     /locus_tag="VJJ79_01260"
     CDS             2103..>3308
                     /locus_tag="VJJ79_01260"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HLC22381.1"
                     /translation="MSFLRAFRSLSRLREVANLLFKEGFDEVLEQLHFKKHVTLERLE
                     KRKKLENNMPVRLRRVMEEAGGAFVKLGQLLSLRSDLIPQEYCEEFSKLQDSVKPVPF
                     SEVKKVIEEDLGKPLNKIFASFNEKPIASASVGQVHKAMLITGQVVAVKVQRPNIGKI
                     FVKDVELLYYLAEQAEQYLPEVRTFKPKRIVEEFEAYTKKELDYKLEAKNIDVFFQHY
                     KYSPHIKIPQVYWDYTTQRVLTMQYLDGKKISEAQNLTLEQKRRITMLLYRSFITQFF
                     DIHTFHADPHPGNILLLKNGKVAFLDFGIVGRVSPDLKENIEMMMIGLVKGDLHILAQ
                     SFISLGIVDDIDEEKFREDLFDAWGEFHGSNVNQIDMARLFSESFRLARKYNMEFPAN
                     FVLLTKAIVT"
BASE COUNT          961 a          703 c          710 g          934 t
ORIGIN      
        1 atcctcttac aaaaaaaaaa tatattgtct ggcccacgta cgattttgaa acggttatcg
       61 gcgaggaaat cgctggcgtg acccatatcc tcagaagcaa cgagttcggt ctgatgcgcg
      121 tcgaactaca gaattatatc aaagatcttc tcgggttcaa aaaacaagac gtgatccaat
      181 atgggcggtt taacgtgatt ggtgcggaga cgcaaggacg cgtgatcaga gaaatgattg
      241 agaaaaaaga agtgactggg tgggacgatc ccaggcttgt gactatcatg gcgctacgac
      301 gacgcggcat tgtgcctggg acattgcatg aattagcgat agacgtgggt ctttcaagca
      361 cagaaacaaa ccttgactgg agcatgattg cagcaatcaa caggaaaatt atcgaccctg
      421 tgacaaaacg gtactttgtt gtgaaaaaac ccaagaagat aaagatagaa catccgttaa
      481 aaactgtgga cgtgccattg cacccacaga acaaaaaatt agggaagaaa catgtggcgt
      541 taggtgatac attttatgtt tcagatcctg tcgaaaaagg aaacgtgtat aggtttatgc
      601 atatgtttaa cttcaaagac gggaaattta tttccgagga atacgaccac tctcttggcg
      661 caaaaattat tcatgcgatt cctgcacacg atgctctaga cgtgcgcgtg ctgatgaacg
      721 acggaagcat catcgaaggg aaaggagaaa aggcattgaa agaattaaaa gacggagaga
      781 ttgtgcagtt cgaacgaatg tttttctgtc gcctcgacga taaagaaaaa atgttatttg
      841 tgtatgctca tccttgaagt ttcttctcta ggtcattttc gtcatcatca ttttgaggaa
      901 tagcatggta cattttcctt ccaggattat aggcaattct tcgcacatat tctggctcac
      961 gctttaattt ggaacatatc catgaaaaat cgaaaggacc atcatgtaca tcactgtcca
     1021 tccatgcttt cactctgtag tatttaggag aataatgcct ggtcttgcga ccatttctca
     1081 catatttctg catctcttcg actgcaccaa ccaagattgc tgcaagcaaa acttttcctg
     1141 ttttaggggt taacgaaatt tcacttctgg ttacagtttc ttcaactcct aacagagccg
     1201 agagtggtgc ttttttaggg ttcattattc tgtcagaatt ttcttttcat ttattagctt
     1261 tactctaggg aactatcgtc gcatatgtga agaaattttc cattacaccc atatacaaca
     1321 ttatcgctaa tgaatctcca agctcggaac cttcaatatt gatatgggaa ttattttcga
     1381 tgatgaagtt ttccaatttc tacgtgccga atattttata agccaaaaca tttataagaa
     1441 aaagatttct ctttaagaag tatgcgcctt accttctcgc ggattgagct aaatgacctc
     1501 gcaaaagcgt ggataattat ttctctcgca tttgctatcg ttctctccga tggtatcctt
     1561 gggctttccc ttctttcaaa tgttcttctc gccgcgttga ccgtaggaac tggatttctg
     1621 ctccacgaac tagggcataa agtcattgca caacgctatg ggtgctgggc cgagtttcgc
     1681 gcggatagtt acatgctgct tcttgccatt gtaacctcgt tctttggcat cgtgtttgca
     1741 gcgccaggcg cagtaatgat cgcaggacgc gtcagcaaaa tgcgaaatgg tttgatttct
     1801 cttgccgggc ctgcagtaaa tattgttctt gcgtttatgt tcctcggact gagttttatt
     1861 ttttcgaatg gttttctagg caatgttact gtgttcggct acataatcaa ttcgtggctt
     1921 gcaatattta acttaatccc tatttggatt ctcgacggaa agaaagtgtt tgactggaac
     1981 aagatcgtct ggggcgtagc actttcgctt gcactgagcc tattttttct taagggaatt
     2041 atgcctctgc caacactctc ttgacacaaa actatttaaa tttataaagc cagttttacc
     2101 atatgtcatt cctgcgcgcg ttccgtagcc tttcccgatt acgtgaagtt gcaaatcttc
     2161 tcttcaaaga gggatttgat gaagttctgg aacaattgca tttcaagaag cacgtgacgc
     2221 tagaacggtt ggaaaaaaga aaaaaactag aaaacaatat gcctgtgcgc ctgcggcgag
     2281 tgatggaaga agcaggcggc gcgttcgtca agctcggaca actcctttct ctgcgttccg
     2341 acctcatccc gcaagagtac tgtgaggaat tttccaaact acaggattct gtcaagcctg
     2401 tgccattctc tgaagtgaaa aaagttattg aagaagactt gggaaaaccg ctcaataaaa
     2461 tctttgcttc gttcaatgaa aaaccgatcg cgtctgcatc cgtaggacaa gtgcacaaag
     2521 caatgctcat tacagggcaa gttgttgctg tcaaagttca gcgcccaaac ataggaaaaa
     2581 tattcgtgaa agatgttgag ctcctttatt acctcgctga gcaagctgaa cagtaccttc
     2641 cagaagttag gacatttaaa ccaaaaagga tcgtcgaaga gtttgaagcg tacaccaaaa
     2701 aagagttaga ttacaagctc gaagcaaaga acattgacgt gttcttccaa cattacaaat
     2761 atagtccaca tatcaagatc ccgcaagtct actgggacta caccacacaa cgcgtgctca
     2821 ctatgcagta ccttgacggg aaaaaaatct ctgaagcaca aaatctcacg ctggaacaaa
     2881 aacggcgcat tacaatgctt ctctaccgaa gcttcatcac gcagttcttt gatattcata
     2941 cgttccatgc agacccgcac ccaggcaata tccttctcct gaaaaatgga aaagtcgcgt
     3001 tcttagattt cggtattgtc ggacgcgtgt cgccagacct taaagagaat attgaaatga
     3061 tgatgatcgg tctcgtcaag ggagacttgc acatactcgc acagagtttt atttcccttg
     3121 gcatagtcga cgatattgac gaagaaaagt tccgcgagga tctttttgac gcatggggag
     3181 agtttcacgg aagtaatgtc aaccagatcg atatggcgcg attgttctca gaaagtttcc
     3241 gccttgcacg aaaatataac atggaatttc ccgctaactt tgttctcctg acaaaagcaa
     3301 tcgtgacg
//
LOCUS       DATDZU010000040         7623 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2233354, whole genome shotgun sequence.
ACCESSION   DATDZU010000040 DATDZU010000000
VERSION     DATDZU010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7623
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2233354"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /gene="endA"
                     /locus_tag="VJJ79_01265"
     CDS             complement(<1..401)
                     /gene="endA"
                     /locus_tag="VJJ79_01265"
                     /EC_number="4.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000214 - tRNA-intron endonuclease
                     complex [Evidence IEA];
                     GO_function: GO:0000213 - tRNA-intron endonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006388 - tRNA splicing, via
                     endonucleolytic cleavage and ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-intron lyase"
                     /protein_id="HLC22382.1"
                     /translation="MTEEVKPEEKVVAELVGERIVVELSDASRELYDKGRYGEQFQKK
                     FQYSLVEALYLLERGKVVVKKGKKEMDFDLLFKIAEKQERNFSIRYAAFKDMRNRGYI
                     VKTALKFGADFRIYDRGVKPGEGHAKWIMYP"
     gene            453..1352
                     /gene="rnz"
                     /locus_tag="VJJ79_01270"
     CDS             453..1352
                     /gene="rnz"
                     /locus_tag="VJJ79_01270"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: protein motif:HMM:NF000801.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HLC22383.1"
                     /translation="MEIILLGTSSMVPTANRNHTAALLRHHDETILIDCGEGTQRQFR
                     KAKISPTKMTRILITHWHGDHVLGLPGLIMTLAANHYGRPLLIYGPQGTKANLEKMFS
                     FFATPTVLSWKAHDIDSGVVFESDDLQIVAYPVKHGIPTLAYRFVEKDKRKIHMDKLG
                     ALGVKPGKHIGQLQHGNDITYNGKTISANDVTSLVKGRIVSFVMDTMFCLGAIDTARD
                     ADLLICEATYTDEMKDEAAERRHMTATDAARIAKEANVKKLVLTHFSQRYKDVSVHEQ
                     EAKDIFPETIVGEDFMTISVEFS"
     gene            complement(1324..1893)
                     /locus_tag="VJJ79_01275"
     CDS             complement(1324..1893)
                     /locus_tag="VJJ79_01275"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HLC22384.1"
                     /translation="MIRKKEFVITFIFFALALISYLFLDKVGPFTGNPFLDAAMQLVT
                     AIGDFVSIFVIGVLLVVYAFLWKKKVLQKQSLFFIFAYLVNSLLILILKTSIGRERPI
                     LGIEDTASFPSGHASEGIFTAKIFGTWYPKFRIALYTFAALSAFSRIYFGLHYLSDIF
                     AGFGISYLTATIFLVLYERYVMKTRQKSS"
     gene            complement(1895..2857)
                     /locus_tag="VJJ79_01280"
     CDS             complement(1895..2857)
                     /locus_tag="VJJ79_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22385.1"
                     /translation="MITVSILRFGAIFAVTFLLFYLVFGLLLRRERWEGLKKSYQFIR
                     KNPILLVPDLVLTVLSSLLLYLAYTYAGIRDVIATLQSAEKEIVAQVLRDYFAQNLIN
                     FVLAIVLLVFVTFFFGVGVDIIRYQLVQQAISNKKPSIGKAWKEKRSYFWNIVLLRIL
                     LFIVGLVAVAVVLLLGGLSYTLVGLFLNDRIAGIVAAIFTVLLGGALLLVLSFSFFFR
                     YPIMFTKNVKSAYQVLKESYAFFRQQRSYVILTWLVLLCLGILSLLISTVFNKVFDQN
                     ILLLQSGWSSIGLLVLQEGLQKIFSIIISLWGTVFLFLRFKEQM"
     gene            2936..3496
                     /gene="alaE"
                     /locus_tag="VJJ79_01285"
     CDS             2936..3496
                     /gene="alaE"
                     /locus_tag="VJJ79_01285"
                     /inference="COORDINATES: protein motif:HMM:NF018333.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0034639 - L-amino acid efflux
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HLC22386.1"
                     /translation="MEDGEKNLEKRITDEPLSNELSSHTTDSSSLYNSLTTVLDKHRE
                     GIRNYLIDTSAAVTFSLPLSVTIEHYIADMENEQVLRTRMCAIAAHLLLGRPYGKFRD
                     WWAKTLHVDASSHRLAKYLTDSSARLLYQIPVYPVVLFISGADWEKGKVAYPTSLAIG
                     AVTGIAYGYCLDLWRKFFGAKPTLRH"
     gene            3539..4096
                     /gene="alaE"
                     /locus_tag="VJJ79_01290"
     CDS             3539..4096
                     /gene="alaE"
                     /locus_tag="VJJ79_01290"
                     /inference="COORDINATES: protein motif:HMM:NF018333.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0034639 - L-amino acid efflux
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HLC22387.1"
                     /translation="MIENKPNLEKRINEEHSQDHFSQNTYFSSIYNNLTTNLRKHRDE
                     IKNYFIDITASITFYTPIMAPMEYFIADMSGEEVLKSRSSAIGIAFLAARPNGIFRDW
                     WARKLNATPESSRIKKILVDASALVVFQIPTYTTILTLSGASLSEIIVALPMGIAIGA
                     TFGRPYGYYLDKWRKLWGGKPTLEK"
     gene            complement(4189..4674)
                     /locus_tag="VJJ79_01295"
     CDS             complement(4189..4674)
                     /locus_tag="VJJ79_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018653217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22388.1"
                     /translation="MKVLDKVWACLRLALGWIFLWAFLDKVFGLGFSTAPDKAWLAGV
                     SPTAGYLTAMTTGPFASFYQSIAGNSVVDLLFMLGLLLLGVSLLLGIGVRVAGYSGAL
                     LMFLMWTSALPPQHNPFIDEHIVYIIVLVGLAYANTGMTWGLGKWWSRTNVAKRYPFL
                     R"
     gene            4755..5783
                     /locus_tag="VJJ79_01300"
     CDS             4755..5783
                     /locus_tag="VJJ79_01300"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22389.1"
                     /translation="MEKTSFSSYKNGKIAQGCNLCVKGQKLVLFITGVCTRSCYFCPL
                     SEQKFHQDVIYANERPITDMNDIIEEAKISDAKGCGITGGDPLTKLDRTLDAIRLLKK
                     TFGTHFHIHLYTPLDLVDEEKIKKLEDAGLDEIRFHLDADDEKLWHKIKIPTRMVKGV
                     EVPCIPKKDLRKMLTFVRDHVAFINLNELEYADAPQNKLAELGFTTKDELSYGIAGSE
                     EFALELLKEFPTLNIHYCTTRLKNSVQMMNRIALRAKHVKQPYDIVKGPALIRGAIYG
                     DEDLETMHTVVEKLFHNDIDTLKKRLLCSKQQVIKFAKQLKKIGYRPEIVEELATYDQ
                     FEIESQAL"
     gene            5788..5991
                     /locus_tag="VJJ79_01305"
     CDS             5788..5991
                     /locus_tag="VJJ79_01305"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 family protein"
                     /protein_id="HLC22390.1"
                     /translation="MEFWELFVFGGFFLIFIGVLLFAGFPIGRLPGDFSFGGENFKVY
                     VPMATSLILSLLLTLFLWLFFRN"
     gene            complement(5962..7077)
                     /gene="rlmD"
                     /locus_tag="VJJ79_01310"
     CDS             complement(5962..7077)
                     /gene="rlmD"
                     /locus_tag="VJJ79_01310"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HLC22391.1"
                     /translation="MATPKCPYFGTCGGCGAQHIDYPLQLENKKQELAYAIGSQDSTV
                     FSGEQYGYRNRMDFIFYGNGIGLREKGKWWKIVDIQECPIANKQLNILLKEVREFFIG
                     IDIFDVKKQSGTFRYVVIRTPRKSSSLSFVLNAQSPRIKEAVEKIKEFGTKTSAENII
                     VTYVPAMTDVSTSPDYFVVKGNDILEEEFLGKQFQFPVQGFFQTNSVLAEKMQEYVHT
                     LLQQYDTKNAHLLDLYGGVGTFGVCNASLFKTVTIIESVPSAIDATKKNATKEKNVTA
                     QLLDAQYLKRVSFSQPLFVITDPPRSGMHPKTIETLKVLKPQCIVYISCNVQQLRKDI
                     PKFKEYRIKSAAMFDFFPHTPHSEAVVELVPEKKPEE"
     gene            complement(7084..>7623)
                     /locus_tag="VJJ79_01315"
     CDS             complement(7084..>7623)
                     /locus_tag="VJJ79_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22392.1"
                     /translation="HRNLRVYDRPFDNYADSRNYSLGHATKEWALILDADERLMETDF
                     ETLAEEQKTYAQKVRRFKIPILNIYSDGYSTQISGLNPRLFFKAGARFHKVVWENVVF
                     PKARDMGYIQVSTAFIKHFLTEYGAIIQKRREWYNTWPIDIAVSDKGVFRSFRFDSPR
                     DCPSFLLWRKFNPERNKYR"
BASE COUNT         2357 a         1641 c         1497 g         2128 t
ORIGIN      
        1 atggggtaca ttatccactt tgcgtgacct tcccctggct taacaccacg atcatagata
       61 cgaaaatctg caccgaactt taacgcagtt ttgacaatgt atcctctgtt gcgcatgtcc
      121 ttgaacgctg cgtagcgaat tgaaaaattt cgctcctgtt tctctgcaat cttgaataag
      181 agatcaaagt ccatttcttt ttttcccttc ttgaccacta ctttgccacg ctctaaaagg
      241 tacaacgctt cgactaagga atactgaaac tttttctgga actgttcgcc atagcgacct
      301 ttgtcataga gctctcttga tgcatcactt agttccacca caatacgttc accgacaagc
      361 tctgcgacaa ctttttcttc cggttttact tcctcagtca taggagcaaa agtacggcaa
      421 actatttaaa aagcttttct ttctctattt ctatggaaat catccttttg ggcaccagct
      481 cgatggtacc cacagcaaac cgcaaccata ccgctgcatt gctgcgacac cacgatgaaa
      541 ctatcctaat cgactgcggt gaaggaacac agagacagtt tcgcaaagca aaaatttctc
      601 ccacaaaaat gactagaatt cttatcacac actggcatgg tgaccatgtg cttgggcttc
      661 cagggttgat catgacactg gctgctaatc attacggacg accactacta atctatggac
      721 cacaaggaac taaagcaaac cttgaaaaaa tgttttcctt ctttgcaacg cctacagtac
      781 taagctggaa agcacatgac atcgactctg gcgttgtttt tgaaagtgac gatttacaaa
      841 ttgttgcata tccagtaaag catggtatac cgacgttagc atataggttt gttgaaaaag
      901 ataaacgaaa aattcatatg gacaaactcg gcgcactcgg cgtgaaacca ggcaaacata
      961 tcgggcagct gcaacatgga aatgatatca cttacaatgg aaaaaccatt tctgccaatg
     1021 acgtgacgtc actcgtgaag ggaagaatcg taagttttgt catggatacg atgttttgcc
     1081 tcggtgctat cgatactgca cgggatgcgg acttgctgat ctgcgaagca acgtacaccg
     1141 atgaaatgaa agatgaagca gcagaacgca ggcacatgac agcaaccgac gcagcacgca
     1201 ttgcaaaaga agcaaacgtg aaaaagcttg tacttaccca tttctcgcaa cggtacaaag
     1261 atgtttctgt ccatgaacag gaagctaaag atattttccc agaaaccatt gtgggcgaag
     1321 attttatgac gatttctgtc gagttttcat aacatagcgt tcgtatagga caagaaaaat
     1381 ggtcgctgtc aagtaactta tcccaaaccc agcaaatata tccgagagat aatgcaaccc
     1441 aaaatatatc cgcgagaatg cagagagtgc tgcgaaagtg tagagagcta tacgaaactt
     1501 tgggtaccag gtaccaaata tttttgcagt aaatatccct tctgaagcat ggccactggg
     1561 aaacgatgca gtatcttcta tgccaaggat tggacgttct ctgccgatag aagtttttag
     1621 aattaaaatc aataagctat tcacaaggta tgcgaaaata aaaaataaac tttgtttttg
     1681 gagcactttt tttttccaga gaaatgcata gacaacaagc agaacgccga tgacaaagat
     1741 agaaacaaag tcgccaatgg cggtcactag ttgcatcgct gcatcgagaa atggattgcc
     1801 agtaaacgga ccgaccttgt caaggaacag gtatgaaata agcgcgagcg caaagaaaat
     1861 gaaagtaatt acaaactctt tttttcgaat cattttacat ttgttctttg aatcgcaaga
     1921 ataggaacac ggtgccccag aggcttatga ttatactaaa aatcttttgt agtccttcct
     1981 ggagaaccaa gagtccaatg ctcgaccatc cgctttggag caataggata ttttgatcaa
     2041 atactttatt gaatactgta cttatcaata gggaaaggat gcctagacat agaagcacga
     2101 gccatgttag tataacatat gacctttgtt gacggaaaaa agcataggac tctttcaata
     2161 cttgatatgc actctttaca ttttttgtga acatgattgg gtaccgaaag aagaagctga
     2221 acgaaagaac aagtaacagg gcgccgccaa gcaagactgt aaagattgca gcgacgatcc
     2281 ctgcgattct gtcattaagg aacagaccaa cgagagtata agaaagacct ccaagcaaca
     2341 atactaccgc gacggcaacg agacctacga taaagagcaa tatacgaagg agaacaatat
     2401 tccaaaaata cgaccgtttt tctttccatg cctttccaat tgacggtttt ttgtttgaaa
     2461 ttgcctgctg cactagctgg tagcgaataa tatctacccc cacaccaaaa aagaatgtga
     2521 caaaaactaa aagcacgatg gcaagaacga aattgataag gttctgtgca aagtaatcac
     2581 gcaaaacctg cgcgacaatt tctttttctg cactttgcaa cgttgcaata acatctctaa
     2641 tccctgcgta agtatatgca agatagagta agagggaact aagtacagta aggacaagat
     2701 ctggaacaag aagtataggg ttttttctga taaactggta actttttttt agaccctccc
     2761 aacgttcacg acgaagaaga agaccaaata ccagataaaa caaaagaaag gttaccgcaa
     2821 agatggcacc aaatctcaag atagacaccg taatcattat tgttgctttt cttttaatga
     2881 tttaaatagt ttttgcagaa gatatttaaa tttccttata tgtacggggg agctcgtgga
     2941 agatggcgag aagaacctcg agaagcgtat aactgatgag cctttatcca atgaactatc
     3001 gtcacatacc acagactctt cttctctcta taacagcctt acaacagttc tagataaaca
     3061 tagggaagga atcagaaatt atctaatcga taccagcgcc gcagttacat tctctctgcc
     3121 tctcagcgta accattgaac attatatcgc ggatatggaa aatgaacaag tgctaagaac
     3181 aagaatgtgc gccattgctg cgcatctgtt attaggaagg ccatacggaa agttccgaga
     3241 ttggtgggca aaaacgttac acgtcgatgc gtctagtcat cgactggcaa aataccttac
     3301 agactcttca gctcgtctcc tttaccagat tcccgtctat cctgttgtcc tatttatttc
     3361 cggtgctgac tgggaaaaag gaaaagttgc ataccctacc tctcttgcta tcggcgccgt
     3421 tacaggaata gcttatgggt actgtcttga tctatggcga aaattttttg gagcaaaacc
     3481 gacactacgg cactaaacaa atttatataa atcttacctt ggatatgctt ggtgcagtat
     3541 gattgagaat aaacccaatc ttgagaaacg tattaatgaa gaacattctc aggatcattt
     3601 ttcacagaat acgtactttt cttctatcta taacaacctt acaacaaatc tgcgcaaaca
     3661 tagggatgaa attaaaaatt atttcattga tatcacagct tcaattacct tttacacgcc
     3721 aattatggca cccatggaat atttcattgc tgatatgagt ggcgaagagg tcctgaagtc
     3781 aagatcgtcc gcaattggaa tcgcatttct ggcagcacga ccaaatggga tattccgcga
     3841 ctggtgggca cgaaaattga acgctactcc tgaaagttcg cgcataaaaa aaattcttgt
     3901 ggacgcttct gcactggtcg tatttcaaat ccctacatat accaccattc tcactctttc
     3961 cggtgcatcg ctttcagaaa taattgttgc acttcctatg ggtatcgcaa taggcgcaac
     4021 ctttggaaga ccatatggtt attacttaga taaatggcga aaactctggg gcggaaaacc
     4081 tacactagag aaataacatt acccttgaga taaaatttca cgtcaagaaa ctgttcaatg
     4141 acttttatgt ttgtcttcac atggtttgtt atttaagagt tatggcaatt aacgaagaaa
     4201 cggatagcgt ttggccacgt ttgttctgct ccaccatttc ccaagacccc atgtcatccc
     4261 tgtatttgcg tatgcaagac caacaagaac aataatgtat acaatatgtt catcaatgaa
     4321 gggattatgt tgcggcggga gcgctgatgt ccacatcaag aacatcaaca atgcgccaga
     4381 gtaccctgcg acacggacgc cgataccaag aagcagactt acccctaaga gaaggagacc
     4441 gagcatgaaa agcaagtcca caacactatt tcctgcaata ctttggtaaa atgatgcgaa
     4501 aggaccggta gtcattgcag tcaaatatcc tgccgtcgga gaaaccccag caagccatgc
     4561 tttatccggt gctgtcgaaa agccaagacc aaaaactttg tcaagaaaag cccagagaaa
     4621 tatccagcca agagccagac gcaaacatgc ccagacttta tccaatactt tcatactatt
     4681 actttttaag gtatactttc cttttatact tttccatcga tagcttctta aagtgctact
     4741 ttttcatttt ctttatggaa aaaacatcat tttcctcgta caaaaacggc aaaattgcac
     4801 aaggctgtaa cctttgcgtg aaaggacaaa aactcgtgct gttcatcact ggcgtgtgca
     4861 cgcgatcttg ttacttctgt cccctctcgg aacaaaaatt tcaccaagat gtgatctatg
     4921 cgaatgaacg acctatcacc gatatgaatg atatcattga agaagcaaaa atatcggatg
     4981 caaaaggctg cggcattact ggtggtgatc cattaaccaa gcttgatcga acacttgacg
     5041 caattaggct cctgaaaaaa acatttggta cccattttca cattcacctc tacactcctc
     5101 ttgaccttgt tgatgaagaa aaaataaaaa agttagaaga tgctgggctt gacgagattc
     5161 gctttcactt ggatgcagac gatgaaaagc tctggcacaa gatcaaaatt ccaacgcgta
     5221 tggtgaaggg ggttgaagtg ccatgtattc caaaaaaaga tttaagaaaa atgcttacat
     5281 ttgttcgaga ccatgttgcc ttcattaact tgaacgagct ggagtacgca gatgcgccac
     5341 aaaacaaact tgcagagctt ggattcacaa caaaagacga attgtcttac ggcattgcag
     5401 gatcggaaga atttgcgttg gagttgctga aagagtttcc gacactgaat attcattact
     5461 gcacgactcg gctaaaaaat tctgtacaga tgatgaacag gattgcactc cgcgccaagc
     5521 acgtcaagca gccctatgat atcgttaaag gacctgctct tattcgcggc gctatttatg
     5581 gtgatgaaga tttagaaacg atgcatactg ttgttgaaaa actgttccat aatgatatcg
     5641 atactctgaa gaaacggctc ctgtgctcaa aacagcaagt gataaaattc gcaaagcaat
     5701 taaagaagat aggctatcga cctgagatcg tcgaagaact tgccacgtac gatcaattcg
     5761 agatcgaatc acaagcactc taataacatg gaattctggg aactttttgt tttcggggga
     5821 ttttttctta ttttcatagg agttctgctc tttgcagggt ttcctatcgg gcgattacct
     5881 ggtgactttt cctttggagg agaaaacttt aaagtgtacg tgccaatggc aacgtcgctt
     5941 attctcagtt tgctattaac attattcctc tggctttttt tcaggaacta gctccacaac
     6001 tgcttcgctg tgtggtgtgt gcgggaaaaa atcgaacatc gccgcacttt ttattctgta
     6061 ttctttgaac ttaggaatat cttttcgaag ttgttgcaca ttgcaagaaa tatagacgat
     6121 acactgcggc tttaggactt taagtgtttc tattgttttg ggatgcatgc cagatcgtgg
     6181 cggatctgtg ataacaaaca atggctgaga aaatgaaact cttttcagat actgtgcatc
     6241 aagcaactgt gccgtgacat ttttttcctt tgtagcattc ttctttgtgg catctatagc
     6301 agaaggaaca ctctcgataa ttgttactgt cttaaaaagc gacgcgttac aaaccccaaa
     6361 ggtaccaacg ccaccataca aatcgagaag gtgcgcattt tttgtatcat actgttggag
     6421 caacgtgtga acatactcct gcattttttc tgctaacacc gaattcgtct ggaaaaatcc
     6481 ttgcactggg aactggaact gtttgccgag gaattcttct tccaaaatat catttccttt
     6541 tacgacaaaa taatctggag atgtagaaac gtctgtcatt gctggaacat acgtcacgat
     6601 aatattttct gcagacgttt ttgttccaaa ctctttaatt ttttctacag cttccttaat
     6661 ccgaggagac tgcgcattca agacaaacga aagcgacgaa cttttccgtg gcgttctgat
     6721 tactacgtac cgaaaggttc ccgattgttt cttgacgtcg aatatgtcga tgccaataaa
     6781 gaattctcgc acttccttga gaagaatatt gagctgttta tttgcaatgg ggcactcctg
     6841 aatgtcaaca attttccacc atttcccttt ctctcgaaga ccaataccat tcccataaaa
     6901 aataaagtcc atacggtttc tgtagccgta ctgttcccct gagaaaactg tactatcttg
     6961 tgaaccaatc gcataggcaa gctcttgttt tttattttcg agctgaagcg gataatcaat
     7021 atgctgtgca ccacagccgc cacacgttcc aaagtaagga cattttggtg ttgccatttt
     7081 cgtctacctg tatttgttcc gttccggatt aaattttctc cataacaaaa aacttgggca
     7141 atcccttggc gaatcaaaac gaaatgatcg aaaaacgcct ttgtcgctca ctgctatatc
     7201 tataggccag gtattgtacc actcacgcct tttttgtatt attgctccat attcagttag
     7261 gaaatgcttt atgaacgctg tactaacttg aatatacccc atatctctag cttttgggaa
     7321 gacgacattt tcccacacaa ctttatgaaa tcgtgctcct gccttaaaaa atagacgcgg
     7381 atttaaacca ctaatttgcg tggaataacc atcggagtat atatttaaaa taggaatctt
     7441 gaatctcctt actttctggg catacgtttt ttgttcttct gcaagtgtct caaaatcagt
     7501 ttccataagt ctctcatctg catcaagaat aagtgcccat tcttttgtgg cgtgcccaag
     7561 agaatagttt ctcgaatcag cataattgtc aaatggacga tcgtacactc taagattcct
     7621 atg
//
LOCUS       DATDZU010000041         4690 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1290607, whole genome shotgun sequence.
ACCESSION   DATDZU010000041 DATDZU010000000
VERSION     DATDZU010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4690
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290607"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VJJ79_01320"
     CDS             <1..466
                     /locus_tag="VJJ79_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22393.1"
                     /translation="LLELEDEAMAFRAYKNAKKHPLFQDGVWPLVFPRWIYEGTEGKY
                     NGRFFFDENIYNAQEEWYRSIAGLKVKSKTRKAIHEAFTWGLQRELFVSQQYKGSGPF
                     IHIYEIPDISATHAVVVRKDGLVIDNGVVKKDFAFPKDLAQVVLELSSEQDL"
     gene            508..800
                     /gene="rnpB"
                     /locus_tag="VJJ79_01325"
     ncRNA           508..800
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VJJ79_01325"
                     /product="RNase P RNA component"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00373"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="archaeal type; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00373"
     gene            820..1605
                     /locus_tag="VJJ79_01330"
     CDS             820..1605
                     /locus_tag="VJJ79_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22394.1"
                     /translation="MQTRRDFLYNGIGGLAGALFPRKKKNACEGVSLDIFIELVEDDI
                     ISDQFFLKNERGRKNIVDQLVLPARKLYTEQLGIPITISSYAPFETFPEPKDGSITVF
                     YGTKRTFLDARYPTMDDLLTIIEHKEQRQKEYEEAASPNKYEEYLRIAVVSDLNDTDG
                     LADIDLKTISLFAKRRPELEDFSEWSLLRIYLRLKGLGLAHELGHMLGLSHAEKTFLK
                     NGTYNIMNTGGNMVDIEDVMQMRYNFSPEDQDILLTLECKTLK"
     gene            1661..1813
                     /locus_tag="VJJ79_01335"
     CDS             1661..1813
                     /locus_tag="VJJ79_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit Sec61beta"
                     /protein_id="HLC22395.1"
                     /translation="MAESVSMPQSGGGLIRYFEDYKSKIEIDKKWILVAIVLVIVVEL
                     FVRKGL"
     gene            1829..2140
                     /locus_tag="VJJ79_01340"
     CDS             1829..2140
                     /locus_tag="VJJ79_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012965413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nascent polypeptide-associated complex protein"
                     /protein_id="HLC22396.1"
                     /translation="MDPRQVQQAMKKMGMKQESIPATEVIIKTTDKEFVIRHPQVAKV
                     TMMGEESFQITGEVEEYTPVKEDDIQTVMEQTGCSKDEARKSLKEADGDLAQAILELQ
                     K"
     gene            2157..2591
                     /locus_tag="VJJ79_01345"
     CDS             2157..2591
                     /locus_tag="VJJ79_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22397.1"
                     /translation="MQDDDLAEEELKRIDHLIFVTLKYTRTVDIIKTILQKFILTIDY
                     KIEQFYNVQYNIEKIKDIPLVPMVRLKNLERLHPHDKKIKDMVDFYMTLKKICNAEQR
                     AKEEYRKNVTLVTKEQEVNIPKLKEYVEKTKEYVQYLDGLMK"
     gene            2588..3352
                     /gene="minD"
                     /locus_tag="VJJ79_01350"
     CDS             2588..3352
                     /gene="minD"
                     /locus_tag="VJJ79_01350"
                     /inference="COORDINATES: protein motif:HMM:TIGR01969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATPase MinD"
                     /protein_id="HLC22398.1"
                     /translation="MKVIGLLSGKGGVGKTSSAINLAAALNHFGKQVILCDANLTTPN
                     VGLYLGTPAPQVTLHHALKGKKTLYDALQRHPSGFHFVAGSLALDDMKDLRLQRFKQL
                     RELDADYVILDGAPGLGKEVLTIMENADELIVVTNPELPAITDALKTVKLAEELGKKI
                     LGVLVTRVKNDELDISLRNIESLIEYPIIGVIPEDGTIREAQAVKDAIIHTHKNAPAT
                     EGYLKLAASICGTAYVPELQQNWAVKVWNLLLGKRV"
     gene            3407..3676
                     /locus_tag="VJJ79_01355"
     CDS             3407..3676
                     /locus_tag="VJJ79_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22399.1"
                     /translation="MEPIIETVNPRKSFLVETTETKFVFHLVGATFYVRKLASKDPRY
                     CLVTQLNQKKKYTEQDLDVGAEVEYIHPRLGRAVQGGAVTSITLR"
     gene            complement(3663..4388)
                     /locus_tag="VJJ79_01360"
     CDS             complement(3663..4388)
                     /locus_tag="VJJ79_01360"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HLC22400.1"
                     /translation="MQDQLYDMLLKEDEVTWQDIIYSLVKSGQIDPWNVDVGKLTRQY
                     IDAVNSMKEMNYFISGKVLLATAILLRIKSNRLVDEDINNFDAFLFHTEDEGFEELDS
                     ILPVGQHRITDIPILGVKTPQARKRKVSINDLIQALERALHVDTRRRLRLQRFLTLNV
                     PQIPQRKVDMGKLIQDVYQKVLTLFGQKENVVFTDLVPGPKKEDTMLTLLPLLHLHNE
                     RKLTIEQQEPFGEIRVKKAPSEE"
     gene            4467..>4690
                     /locus_tag="VJJ79_01365"
     CDS             4467..>4690
                     /locus_tag="VJJ79_01365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22401.1"
                     /translation="MKKSMRKKRVWTIILGLAVIFAVLSIVFWNLQKSSSKEESKVYA
                     APGIATTCRETDDGANPYEKGRVYVGPWWS"
BASE COUNT         1587 a          930 c         1016 g         1157 t
ORIGIN      
        1 acttctggaa ttagaagacg aagcaatggc ctttcgagca tacaagaatg caaaaaagca
       61 ccccctcttc caagacggag tatggccttt ggtttttccg agatggatat atgagggaac
      121 agaaggaaaa tataatggaa gatttttctt tgatgaaaat atctataatg ctcaagaaga
      181 atggtataga tcgatagctg gactaaaggt aaaatcaaaa acaaggaaag caatacacga
      241 agcattcaca tggggcttac aaagagagct tttcgtatct caacaataca aaggatccgg
      301 accattcata catatatatg aaatcccaga tatttcagca acccatgcag tcgttgtgag
      361 aaaagatggt cttgtcattg ataatggagt ggtgaaaaaa gactttgctt ttcctaaaga
      421 tttggcgcaa gtcgtactag agctttcgag cgagcaagat ctctaagcaa acctatataa
      481 actagaaagt aacaggaaaa attgaaaggt aggcaggaac tacgcacggg acgcaagtcc
      541 tgaggaaagt ccacccacca tcaaaacgtt gctctcacga gttcctgaaa gggaaggcaa
      601 ccatccagaa acgacacggc cttggaagag gatgatcatg gcgaagtctc ctgcaagggg
      661 gatgagttaa cccacggacg ttttccaagg atacgatgaa acggatgagc ccctgcgggt
      721 gcaagtcgca cagcgacgct cagttgaatg cgtagccctt ccatatgcga aggacagaag
      781 gtggcttact cctgtctacc ctttttctct caaaacaaca tgcagacacg gcgagacttt
      841 ttgtacaatg gcattggagg gctagctgga gcgctctttc ctaggaaaaa gaaaaatgca
      901 tgtgaaggag tttcgctaga cattttcatc gaactggtag aggacgacat tattagtgat
      961 cagttttttc tcaaaaatga aagaggcaga aaaaatatcg tcgaccaact agtcttgcct
     1021 gcacggaaac tgtacacaga acaactagga attccaataa caatcagttc atatgcacca
     1081 tttgaaacgt ttccagaacc aaaagatgga agcatcacag tattttacgg gacaaagaga
     1141 acgttcctag acgcacgcta cccaacaatg gacgatcttc tcactattat agaacacaaa
     1201 gaacagcgtc agaaagaata cgaagaagca gcaagtccaa ataaatatga agaatacctc
     1261 agaatcgcag tggtatcaga tctcaatgat actgacggtc tcgcagacat tgacctaaaa
     1321 actatcagcc tatttgccaa acggcgaccg gaactggaag acttttctga atggtccctt
     1381 ctcagaatat acctgcgctt aaaaggtcta ggactcgcac acgaacttgg gcatatgctt
     1441 gggctttcgc atgcagaaaa aacgttcctg aagaatggaa cctataatat catgaatact
     1501 gggggcaaca tggttgacat tgaagacgtc atgcaaatgc gctacaattt ctcaccagaa
     1561 gaccaggaca tacttcttac gctcgaatgt aaaaccctaa aataagccgt aaaagtaggg
     1621 tatagcaaga tttttaaagt atagaaactt tcctccagca atggccgaaa gcgtttctat
     1681 gcctcaatct ggtggcggac tgattcgtta ctttgaagat tataagagca agattgagat
     1741 cgacaaaaag tggatcctcg tcgcaatcgt tctagtgatt gtcgtggaac tctttgtaag
     1801 gaaaggacta taaaaaatgt ttcccggaat ggaccctcga caggtacagc aggctatgaa
     1861 aaaaatgggc atgaagcaag agtccatacc tgcaactgaa gttattatca aaaccacgga
     1921 taaggagttc gtgatccgtc atccgcaggt tgcaaaagta accatgatgg gagaggaaag
     1981 ttttcaaatc accggcgagg tagaagagta cacgccagta aaagaagatg atatccagac
     2041 agtaatggaa caaacaggat gttcaaaaga tgaggcacga aaatcattga aagaagcaga
     2101 cggcgacctc gcacaagcaa tccttgagct tcaaaaataa aacagggaga gtgaaaatgc
     2161 aagatgatga cctagcagaa gaagaactga aacgcattga ccacttgatt tttgtcacgc
     2221 ttaaatacac ccgaacggtg gatatcatta aaaccattct tcaaaaattt attctcacta
     2281 ttgattataa gatagaacaa ttttacaacg tacaatacaa tatagaaaaa ataaaggaca
     2341 ttcctttggt gccaatggta agactcaaaa acctcgaacg cctacacccg catgataaaa
     2401 aaataaagga tatggttgat ttctatatga ctctgaaaaa aatatgcaac gcagaacaga
     2461 gagcgaagga agagtacaga aaaaacgtga cgctagtaac gaaagaacaa gaagtcaaca
     2521 tccctaaatt aaaagaatat gtggaaaaaa caaaagagta cgtgcagtat ctggatggct
     2581 taatgaaatg aaagtgattg gattgcttag cgggaaaggc ggtgtaggaa aaacgtctag
     2641 cgcgattaac ctcgcagccg cactgaacca ttttggaaaa caagtaattc tttgtgatgc
     2701 aaacctcacc acgccaaacg tgggattata tttgggaacg cctgcaccac aagtcacgct
     2761 ccaccatgcg ctaaaaggaa aaaaaacgtt gtatgacgcg ctgcaacgtc atccgtcagg
     2821 atttcatttt gttgcgggta gtcttgcatt ggatgacatg aaagacttgc gcctacagag
     2881 gtttaagcaa ctgagagaat tagacgcaga ctacgtgatt ctcgacggcg cacccggtct
     2941 tggaaaagaa gtgctcacta ttatggaaaa tgcggatgaa cttattgtgg tcacgaatcc
     3001 agaacttcca gcaatcacgg acgcgctgaa gacggtcaag cttgcggaag aactcggaaa
     3061 aaaaatattg ggcgttctgg ttacgcgggt aaaaaatgat gaattagaca tttctcttcg
     3121 caatattgaa tcactcattg agtatccaat aattggcgta atcccagaag atggtactat
     3181 acgtgaggca caggcagtca aggatgcaat aattcatacg cacaaaaacg cacctgcaac
     3241 agagggatat cttaagctcg cggcaagtat ctgcggtacg gcttacgtcc cagaactgca
     3301 gcagaattgg gcagttaagg tttggaactt gcttctggga aaaagagtat aacctatata
     3361 ttctatccta caaattttat ttatatgaga aaacaaagaa aaagctatgg agcctatcat
     3421 tgagaccgtc aatccacgaa aaagttttct tgtggaaaca acagagacaa aatttgtgtt
     3481 ccatcttgtg ggtgcaacgt tctatgtgcg aaagcttgca agcaaggacc cacgctattg
     3541 ccttgttacg cagttaaacc aaaaaaagaa atacacagaa caagacttag acgttggtgc
     3601 agaggtagag tacatacatc ctcgtctagg cagagcagtg caaggtggtg cagttacgag
     3661 cattactctt cgctaggtgc cttctttact ctgatttctc caaatggttc ctgttgttct
     3721 attgtgagtt ttctttcatt atgcaagtgt agaagaggga gaagcgtgag catggtatct
     3781 tcctttttcg gtcctgggac aaggtcagta aagacaacat tttctttctg accaaaaagg
     3841 gtaagaactt tctggtacac atcctggatc aattttccca tgtccacttt tctttgagga
     3901 atttgaggca cattcagtgt tagaaatcgt tgaagacgga gccgtcgtcg tgtatcgaca
     3961 tgcagcgcac gttccaatgc ttgaatcaaa tcattgatgg acacttttcg ctttcgtgcc
     4021 tgtggtgtct tcacccctag aatgggaata tctgtgatac gatgctgacc aactggaaga
     4081 atactgtcaa gctcttcaaa tccttcatct tctgtatgaa acaagaaagc gtcaaagtta
     4141 ttgatatcct catcaactag tcggttagat ttaatgcgca gaagaatggc agtagcaagc
     4201 aacacttttc cagatataaa atagttcatc tctttcattg aatttactgc atcaatatac
     4261 tgcctagtta gttttcctac atcgacgttc catggatcga tttgaccact tttcacaaga
     4321 gaataaataa tgtcctgcca cgtgacctca tcttccttga gaagcatgtc atacaactga
     4381 tcttgcatac aaatctacaa cgaaaacgta tttataaaca tttttaacaa aaagcatata
     4441 aacttcattc acataataaa aatatattga aaaaatctat gcgtaaaaag agagtgtgga
     4501 caataatact cggtcttgct gttatttttg ctgtactttc tattgtcttc tggaatctac
     4561 aaaaatcatc ctctaaagaa gaatcaaaag tatatgcagc gccaggtata gcaactactt
     4621 gtagagaaac tgatgatgga gcaaatccct atgaaaaagg aagagtgtac gtaggaccat
     4681 ggtggagctt
//
LOCUS       DATDZU010000042         3045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_167081, whole genome shotgun sequence.
ACCESSION   DATDZU010000042 DATDZU010000000
VERSION     DATDZU010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167081"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..312)
                     /locus_tag="VJJ79_01370"
     CDS             complement(10..312)
                     /locus_tag="VJJ79_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22402.1"
                     /translation="MHEVTEKPMLVMQVRPEFSIIYKANPKLKLKKEHIKTQREFLGY
                     LTRTAKNWKEGRYFLRSNLGTFAAFYVKKGGHVTLYKENKQKIPYLCWSYFGKRKR"
     gene            454..>3045
                     /gene="ileS"
                     /locus_tag="VJJ79_01375"
     CDS             454..>3045
                     /gene="ileS"
                     /locus_tag="VJJ79_01375"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HLC22403.1"
                     /translation="MFDFAQVETDVLTYWKKEKIYPSLKKRNAKGKKFYFLQGPPYTS
                     GYLHLGQAWNNTLKDMVLRYHRMKGEDVWDRGGYDMHGLPTERKVMEELGFTKKEEIV
                     KYGVDKFAKKCLEYSIDKAQVMSKDLWRMGVWMDHENAYMPIKNEYIESIWWLVKQAH
                     EKKRLYEGLRTLSWCPNCATAMAKHECEYKELTEESIFVKFKVKGKNNEYLLVWTTTP
                     WTLAFNMGIMVHPEIEYLRVKVDDEVWIVAKGLAAAFISGLLGKKMQVLEAFMGEKLK
                     GMEYEHFWAHDIPQFQAFKKQAPKTHTVVLSEEYVSLKGGTGLVHMAGGCGPEDYEVS
                     HRNNILPFNNLHEDGTFPKEMGMFTGLRAKKDDAKFIFALKESGVLVAVAPVQHEYAH
                     CQRCHEPVVFRTTKQWFFKTEDLKAKMVEENAGIHWVPITAKHAFDSWLHNLRDNSIT
                     KQRFWGTPVPIWRCEKCDMYTVVGSLQELNKLAGKLPENLHKPWIDAVHWKCACGGTM
                     KRVPDILDVWIDAGCASWACLDYPQRTDLFQRYFPSDFIIEGKDQIRGWFNLLMVASM
                     LAFDKNCFRNVYMHGFVTDVSGVKMSKSLGNVISPYELINKYGVDSMRFYMTGTNAGE
                     DSNFSWEELKIKYKNLAIIWNVHKYLIDYANNLDVIPRVPKRLDIEEKYMFSRLHSTM
                     KRVTEAMDTYQIDVVPALLEELFLELSRTYIQLTREKVNEKPELVLGTIYHVLIESLK
                     MLSLLCPFLSEKMYLDLKDAFKLKEKSIHHYFWPMYNEKYIDPALEQNMALVQEIIQA
                     TLAAREQASIGVRWPLKKVTVVSTDLAMKKSVTTLSSLLLLHVNIKALDIVSKLKEGN
                     VTITPNKN"
BASE COUNT          876 a          567 c          735 g          867 t
ORIGIN      
        1 tttataaagt tatctcttcc gtttcccaaa atagctccag cagagatagg gaatcttctg
       61 cttgttttct ttatagagcg ttacatgacc gccttttttg acatagaaag cagcgaatgt
      121 cccaagatta gaacgcaaga aatagcgtcc ttccttccag ttttttgctg ttcgcgtgag
      181 atagccgaga aactctcttt gggttttaat atgctctttt tttagtttga gcttaggatt
      241 tgctttatag atgatagaaa actctgggcg aacctgcatg accaacatag gtttttcggt
      301 tacttcgtgc atgtttgtag tccattaggc tcaccccttt atctactgaa gtgagtcacc
      361 agctttataa atcttgcggt cgtgttacca ctcttcaata attgcagttt tacataaagt
      421 tatataaagg tgcattcgcc ttttttctct tttatgttcg attttgcaca ggttgaaacc
      481 gatgttctta cctactggaa aaaagagaag atttatcctt ctttgaagaa aagaaatgcc
      541 aaagggaaaa aattctattt cttgcaagga ccgccctata cgtccggtta tttgcactta
      601 ggtcaggcat ggaacaatac cctaaaagat atggtgcttc gctatcatcg gatgaaagga
      661 gaagatgtct gggatcgtgg cggctatgat atgcacgggc ttcccacaga acgtaaggtg
      721 atggaagagc tgggctttac caagaaagaa gaaatagtga aatatggtgt tgataagttt
      781 gcaaaaaagt gtcttgagta ttctattgat aaggcacaag tgatgagcaa agatctttgg
      841 cgcatgggtg tatggatgga tcatgagaat gcctatatgc ctatcaagaa tgaatatatc
      901 gaatctatct ggtggctggt caaacaagcg cacgaaaaaa agcggttata tgaaggtcta
      961 cggacattga gctggtgccc taactgtgcg accgcaatgg cgaagcatga gtgcgagtac
     1021 aaagaactta ctgaagagtc tatctttgtg aaatttaaag taaaaggaaa aaataatgaa
     1081 tatctactcg tgtggactac taccccttgg acgcttgcgt tcaatatggg catcatggtg
     1141 catcctgaga ttgaatatct tagagtgaaa gtcgacgacg aggtatggat tgttgccaaa
     1201 ggactcgctg cggcctttat ttcaggacta ctcggaaaaa agatgcaagt gcttgaagca
     1261 tttatgggag aaaaacttaa aggaatggaa tacgaacatt tctgggcaca cgatattccg
     1321 cagtttcagg cgttcaaaaa gcaggcgccg aagacgcaca ccgttgtatt gtctgaagag
     1381 tatgtttcat tgaaaggagg aacagggctt gttcatatgg ctggcggctg cgggcctgag
     1441 gattatgaag taagtcatcg taacaatatt ctgccgttca acaatttgca tgaagatggg
     1501 acgttcccaa aagagatggg aatgtttaca ggattgcgcg ctaagaaaga tgatgccaag
     1561 tttatttttg cattgaaaga gtccggcgtt cttgttgctg ttgctcctgt ccagcacgag
     1621 tacgcgcatt gtcagcgttg ccacgaacct gtggtgttcc ggacgacgaa acaatggttc
     1681 tttaaaactg aagatttgaa agcaaagatg gttgaagaaa atgcaggcat acactgggtc
     1741 ccaattactg caaagcatgc attcgatagt tggctccata accttaggga taactcgatc
     1801 acaaagcaac gattctgggg aacgcctgtg ccgatttggc gctgtgagaa atgtgatatg
     1861 tatactgttg tcggctcgtt acaagaacta aataaacttg caggaaagtt gccagaaaat
     1921 ctacacaagc cgtggattga tgcagtgcac tggaaatgtg cgtgcggcgg tacgatgaaa
     1981 cgagtgcccg atattcttga tgtctggatc gatgctggtt gcgcgtcgtg ggcgtgcctt
     2041 gattatccgc agcgtactga tttattccag cgttattttc cgtctgactt tatcattgaa
     2101 gggaaggatc agattcgcgg atggtttaac ctgctcatgg tggcgtcgat gcttgcattt
     2161 gataaaaatt gttttagaaa tgtttacatg cacgggtttg tcacggatgt ctccggagtc
     2221 aagatgtcga agtctctcgg gaacgtgatt tctccttacg aattgatcaa taagtatggg
     2281 gttgatagca tgcgctttta catgactgga acgaacgcag gggaggatag caattttagc
     2341 tgggaagaat tgaagatcaa gtacaagaac cttgccataa tctggaatgt tcacaaatat
     2401 cttattgatt acgcaaataa tctggacgtc ataccgagag ttcctaaacg attggatatt
     2461 gaagagaagt atatgttttc gcgcttgcac agcacgatga agcgtgtgac ggaagcgatg
     2521 gatacgtacc agatagatgt cgttccagcg ctcctcgaag aattgtttct tgagcttagc
     2581 cggacttata tccagctgac acgtgaaaaa gtgaatgaaa agccggagct tgtgcttgga
     2641 actatttacc atgtgctcat tgaaagtttg aaaatgcttt ctctcctctg tcctttcctt
     2701 tcagaaaaaa tgtatcttga tttgaaagat gcgttcaagc tcaaagagaa aagcattcat
     2761 cattatttct ggcctatgta caatgaaaag tatattgacc ctgcacttga acaaaatatg
     2821 gctcttgtcc aagaaattat tcaggcaaca ttggccgcac gggaacaagc gtccattggc
     2881 gtgcgctggc ctctgaaaaa agtaactgtt gtcagcacag atctggcgat gaaaaaatct
     2941 gtgactaccc tttcgtcctt gctcttgttg catgtgaata taaaagcctt ggatattgtt
     3001 tcaaagttga aggaaggaaa cgtgacgatc acgccgaaca aaaat
//
LOCUS       DATDZU010000043         3690 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1594600, whole genome shotgun sequence.
ACCESSION   DATDZU010000043 DATDZU010000000
VERSION     DATDZU010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3690
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1594600"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VJJ79_01380"
     CDS             <1..544
                     /locus_tag="VJJ79_01380"
                     /inference="COORDINATES: protein motif:HMM:NF024687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLC22404.1"
                     /translation="TSKARSKIRNVLNIKTLGEKKEEDVEQPLIQKLKLPPEIKPSVV
                     KLSKCCEIIYGTPVLGFFTKDKHVTIHHKDCANIYALDQTKTVPLSWFEIQDRDIEKM
                     KVLVTDRVGLLSEVMAIISGASINVLSINTRSKKDKIMITFKVKIPSGKNFDEILKRI
                     RRIKSVLDVRRYDPVKAEFV"
     gene            597..893
                     /locus_tag="VJJ79_01385"
     CDS             597..893
                     /locus_tag="VJJ79_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22405.1"
                     /translation="MKDTKGQYLAKSIILSRKPGAPKDQFKTLLVALFDANDAHKSGK
                     TPLKVLEYLNVEKVRLTKLQVSYYLEGNDLIVNDLSEVNIKQDGALVVIDGKQK"
     gene            complement(919..2232)
                     /gene="lonB"
                     /locus_tag="VJJ79_01390"
                     /pseudo
     CDS             complement(919..2232)
                     /gene="lonB"
                     /locus_tag="VJJ79_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012940056.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease LonB"
     gene            complement(2289..>3690)
                     /locus_tag="VJJ79_01395"
     CDS             complement(2289..>3690)
                     /locus_tag="VJJ79_01395"
                     /inference="COORDINATES: protein motif:HMM:NF026240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HLC22406.1"
                     /translation="IEKKEMKKQIDELMTTHEKKVLRKENIQAKEQNYEAVFLDKNEL
                     KVVGEKDGEISPVRVLSTNRYDYKGTMIKLTTTQNKELMVTPEHKIAVSRNAKTEYIE
                     AAKLKGGDEIITQKDEGIIDEQDIINTYDERQQEQCKLYYQYRGIKEKNPAWGYKRIA
                     KMMGERIGKTRWWNAQKHTPTPIQTTRWLKERGLLPLKLNHPKLPQIAKILGATFGDG
                     GVFENLNGMFLSSSEKEAVEEFARDLEEIASMHKNENGRIIEAGEYGHSWCYQNTNRN
                     IIRFFLALGAPKGNKTKLPLKIPGWISLQEAFEDEFFGSFFGGELGTPIMHKAGNYLT
                     CLELGITGFPVLKENRLDFLKGVTQYLNKRGVTTTSIYQGKTKTESLIFRLLIEKKID
                     NLLLFMINTKLNYCTYKKERLLTALGQWAMTKKKKYHELLERGYGAEHAMKTLHLSPQ
                     SLYLLLNHFGPEEVTA"
BASE COUNT          916 a          843 c          682 g         1249 t
ORIGIN      
        1 aacaagcaaa gcacgaagca agattcggaa tgttttgaat atcaagactt taggggagaa
       61 aaaagaagag gacgttgaac agcccttgat tcaaaaactg aagcttcccc ctgagatcaa
      121 gccgagtgtg gtcaagcttt cgaagtgctg cgagattatc tatggcactc ctgttctcgg
      181 cttttttacc aaagacaagc atgtcacgat ccatcataag gattgtgcaa atatttatgc
      241 ccttgatcag accaaaactg tgcctctttc ctggtttgaa atccaagacc gcgatattga
      301 aaaaatgaag gtcctggtta ctgatcgtgt cggccttctt tcagaagtga tggcgattat
      361 ctccggagcc agcatcaatg tcttgtcaat caacacgcgg agcaagaagg acaagattat
      421 gatcaccttt aaagtaaaaa ttccgtctgg gaaaaacttt gacgagattc tcaagcgtat
      481 tcgacgcatt aaaagcgttc ttgatgtccg gcgttatgac cctgtcaagg ctgagtttgt
      541 ttaatgctgc tcgtttatac attaatttta tatagctcgg gtttctctct taacatatga
      601 aagatacaaa aggtcaatac ttggcaaaga gcatcatctt gagcaggaag ccaggagctc
      661 cgaaagacca gtttaaaacc ctcctggttg cgctctttga tgcgaatgat gcacataaat
      721 ccggcaagac gccccttaag gttcttgaat acctcaatgt cgagaaagtg cggttaacta
      781 agcttcaagt ttcttactat cttgaaggaa atgatctcat tgtgaatgac ctttctgaag
      841 tgaacatcaa acaggacggc gccttagtcg ttattgacgg caagcagaaa taagaagggc
      901 ttcactacac ctcattcctt attttccatt tctttgagta atactcttca aaatgctttc
      961 ttttcctttc cagtccagcg cattttcgag cacgtgaaca atggtatcta caggaatgat
     1021 cttgatcttg gataaggttt cttcaggaat gacaatatca ttcaggttgc ttcgaggaac
     1081 aatcacctgt ttcaatcctg attcgattgc agcttccact tttgcagaaa ctccacccac
     1141 aggaaggact tctcctcgca cggacaagct tccggtcatt gcggtatctt ggcgaatcgg
     1201 gatgtttttc agcgctgaaa taatgctggt tgcaacagca atgcttgcgc tgtctccctc
     1261 gacaccctca tacgtttgga ggaactgtac ataaatatca tatttttcct taatatcttc
     1321 tccaaaatag gtcttgataa tcgcagaaac attcttgatt gcttctttgg caatctctcc
     1381 gagttttcca gttgctacaa tctccttctc ttttccgcct gcagtcactt gactctcaat
     1441 cggcagaaga attcctgagt agatacctgt ttccccaccc atcactgcaa gaccattcac
     1501 tcttcccacc cgcttgcctt cagtaataat gacttcgtat tcttttcttc gttcaataat
     1561 cttatcagca agctgttttt ccaaggttcg cgaaatatat ttcgccccca ctacatgatc
     1621 tcgtgtaacg atatttgctt tttgttcaag tgcaagatct cctgctgcac gaataagtcc
     1681 gccaagctcc cgcaatcgga gtgtgagatg attcttgcgg tttgcacgct tttttgcttc
     1741 aagaataatc tcttcgacag catcacggct gaagtgggga atttttttgt ctttcaccac
     1801 ttcttgggcg acaaagacag cgatcttgta tcggttttca ggcgtgtctt tcatcgtttc
     1861 tttcatatac acttcatagc catatcctcg gatacgcgac cgcaaggcag ggtgcatgtg
     1921 tttgagggtt tccaagtttc ctgcagcaat aagtacaaag ttgcagggaa ctgcttcagt
     1981 tctgaccata gcacccgcgc ttcgttcact ttgtcctgta atcgcgtatt ttccctcctg
     2041 cagtgaggtt aagagctctt gttgggtatg cgcttgcaaa gttgcaattt catcaataaa
     2101 caaaaccccc atgtgtgctt tgtggatcat gcctgcgacg acacgttcgt ttgctggtgt
     2161 gccgagaccg cctgaatttt tgcaaagaat accattgacg atcacatttc cagactccgt
     2221 cgtcacatta tacactttcc cttgataagg aaccttttca acctttgtta tcttttcctc
     2281 cccgaatttc atgcggttac ctcttctggt ccgaaatgat taaggaggag atacaacgat
     2341 tgcgggctta aatgcaatgt tttcatcgca tgttctgcac cataccctct ttcgagaagc
     2401 tcatggtatt tctttttctt tgtcattgcc cattgtccca gcgccgtcaa taacctctct
     2461 ttcttgtagg tacaataatt aagttttgtg ttgatcataa acaacaggag attgtctatt
     2521 ttcttttcta tcagtaatct aaaaattaaa ctttctgttt ttgtttttcc ttggtaaatt
     2581 gatgttgttg tcacgcccct tttgttcaaa tactgtgtaa ctccttttaa aaaatccaag
     2641 cgattttctt tcaagacggg aaaaccggtg atgccgagtt caaggcatgt taagtagttt
     2701 ccagccttat gcatgatagg agttcccaac tctcccccaa aaaaggatcc aaaaaattca
     2761 tcttcaaaag cttcttgcaa ggaaatccaa cccggtattt tcaatggcag ctttgtttta
     2821 ttgcctttgg gggcccccaa agctaagaaa aatcggatga tatttctatt cgtgttttga
     2881 tagcaccagg agtgtccata ttctcctgct tcaataattc ttccattttc atttttatgc
     2941 atcgatgcaa tctcttctaa gtctctcgca aattcttcta ctgcttcttt ttcagaactt
     3001 gataggaaca tgccgttcag attttcaaaa acaccgccgt ctccaaatgt tgctccaaga
     3061 atctttgcta tctgcggtaa ttttgggtga ttgagcttta agggcaataa ccctctttct
     3121 tttagccacc ttgtagtttg aatgggggtg ggtgtatgtt tttgtgcgtt ccaccatcgt
     3181 gtttttccta tcctctctcc catcatcttt gcaattcgtt tatatcccca tgccggattt
     3241 ttctctttta tacctcgata ttgataatag agtttacatt gttcttgttg tcgttcatca
     3301 taggtgttaa tgatatcttg ttcatctata ataccctcat ctttttgtgt tataatctca
     3361 tctccacctt tcagctttgc agcttcgata tactctgttt ttgcatttct gcttaccgct
     3421 atcttatgtt ctggcgttac cataagttct ttattttgtg tcgttgtcag ttttatcatg
     3481 gttcctttgt aatcatacct atttgttgat aaaacccgta caggagaaat ctccccatct
     3541 ttctcaccta ctaccttaag ttcgttttta tcgaggaaga ctgcttcata attttgttct
     3601 ttagcttgta tattttcttt tctcaaaacc ttcttctcat gagtagtcat aagttcatct
     3661 atctgttttt tcatttcttt tttttcaatc
//
LOCUS       DATDZU010000044         2774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_285426, whole genome shotgun sequence.
ACCESSION   DATDZU010000044 DATDZU010000000
VERSION     DATDZU010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2774
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285426"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VJJ79_01400"
     CDS             <1..346
                     /locus_tag="VJJ79_01400"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HLC22407.1"
                     /translation="DGLTTEELDTCDVIVTIPTSKKSPTMNVSHAATILLYELFRHSQ
                     KEKVGDNIIFAGKKEKEQFMNILENKVQAMDFPTDQKRETQRLVWRKVIGKSNLTRRE
                     IMALFGFFKRIR"
     gene            343..1248
                     /locus_tag="VJJ79_01405"
     CDS             343..1248
                     /locus_tag="VJJ79_01405"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HLC22408.1"
                     /translation="MIYELSRDNIDLAREEVVRLAHTTEYKLYGNILVCSGKIEYARL
                     AYTNNVFEEIFISNKIENVDWQAYYKDNFCVRSNITAKEKELAAIIWDAVKEPKVKLK
                     NATTEFKFFFTEDMIICGKKVWTRKEKFHLRRPDIRPGFFPVSLKPKLARVLVNISGV
                     QNGTIWDPFCGTGGILLEAALMDLKVIGTDIDPAMIRAAKKNFDAYKQNGEFHGADAR
                     EEIVNCNAIVTDPPYGKRASLKKVEIEQLYREFLAHVYPFVDLVVIMVPNDVKVISKY
                     VQTFETEDYVHGSLTRHILILEKKR"
     gene            complement(1231..2301)
                     /locus_tag="VJJ79_01410"
     CDS             complement(1231..2301)
                     /locus_tag="VJJ79_01410"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLC22409.1"
                     /translation="MDTIALKFPRFVTFLAYAGVFVGFTGMVFILYTLVIETWKLIFV
                     PGTAPALAPLLPGVQIAGAPTLSFWHWILAIFVVAVIHEFSHGVVARLFHVPIKSSGV
                     AFFGPILGAFVEPEETELEKISIWKQISVFAAGPFSNMLSGALVLLVMTLIFVPLVSQ
                     LYQANGITVTAVVDGYPMNQTGIDVPFTISGVNGNQTLAFVSFLDTLSAAAPGETMLL
                     ETNKGNYSVTPVANPDDPTKAFLGVSGLEQEVVLKEQFASLEPLRPVLDWLQLFLIWL
                     FLIHIGIGLFNLLPLGPLDGGRMFYAVAFAIVKDTKKAKRALMLSTTLCLVLIIINFL
                     PWLNKLFTWLFGTFVSLLTFLF"
     gene            complement(2458..2625)
                     /locus_tag="VJJ79_01415"
     CDS             complement(2458..2625)
                     /locus_tag="VJJ79_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22410.1"
                     /translation="MVKFEATVARIFRRIFVCRRCKQKVRTDMGRILAGKVKCRTCQG
                     RAFRPIKSKKS"
BASE COUNT          935 a          570 c          574 g          695 t
ORIGIN      
        1 cgacggtctc acaacagaag agcttgacac ctgtgacgtt atcgtcacga tcccaacatc
       61 aaaaaaatct ccaactatga acgtgtccca tgcagcaaca atactcctct acgagctatt
      121 cagacattca caaaaagaaa aagtaggcga caatattata tttgcgggaa aaaaagaaaa
      181 agaacagttc atgaacattc ttgaaaataa ggtacaagca atggattttc ctacggatca
      241 gaaacgagaa acgcagcggc ttgtttggag aaaagtcatt ggaaagagta acctaacaag
      301 acgggagata atggcccttt ttggcttttt caaacggata cgatgatcta cgaactctca
      361 cgggataata tcgacttggc aagggaagaa gtcgtacgcc ttgcgcatac aacagagtat
      421 aaactatacg gcaacatctt ggtatgctct ggaaaaatag agtatgcacg cctcgcttat
      481 acaaacaatg tatttgaaga gattttcatc tccaacaaga tagaaaatgt agactggcaa
      541 gcatattata aggacaattt ttgtgtacga agtaatatca cggcaaaaga aaaagagctt
      601 gcggcaatca tctgggatgc agtgaaagag ccaaaagtca aactcaagaa tgcaacaaca
      661 gagttcaaat ttttttttac cgaagatatg attatctgcg gaaagaaagt gtggacgcga
      721 aaagaaaagt ttcatcttcg tcgcccagat attcgtccag gttttttccc cgtgtctttg
      781 aaaccgaagc ttgcgcgcgt gttagtgaac atttctggag tgcaaaacgg aactatctgg
      841 gacccattct gtggcactgg cggaattcta ttagaagcag cgctcatgga tctaaaagtc
      901 ataggaacag atatcgatcc cgcaatgatc cgtgcagcaa agaaaaattt tgatgcgtac
      961 aaacaaaatg gcgaatttca tggtgcagat gcacgagaag aaatagtaaa ttgtaatgca
     1021 atcgtgacag atccgccata tggaaagcgc gcgtcactaa aaaaggtaga aattgagcag
     1081 ctctatagag aatttcttgc acacgtctat ccttttgtgg acctagtagt tattatggtt
     1141 cccaatgatg tcaaagtaat ctcaaaatat gtgcagacgt ttgaaacaga agactatgta
     1201 cacggatcgt taacacgtca tattctcatc ttagaaaaga aacgttaaca agcttacaaa
     1261 agtaccaaag agccatgtaa ataatttgtt cagccaagga aggaagttga taatgataag
     1321 gactaaacac agggtagtgg aaagcattag cgcacgtttt gctttcttcg tatctttcac
     1381 aatggcaaac gcaacagcat aaaacatacg tccaccatcc aatggaccga gtggcagaag
     1441 attaaacaac ccaatgccga tatggatcag gaagagccaa atcaagaaca actggagcca
     1501 gtcaagtact ggacgcagag gttcaagaga tgcaaattgt tctttaagca ctacttcttg
     1561 ttctagaccg ctaacaccaa gaaacgcttt cgtgggatca tcaggatttg cgacaggagt
     1621 gacagaatag tttcctttat tggtttctaa caacatagtc tcaccaggtg cagcagctga
     1681 gagtgtatct agaaacgaaa caaaagcgag tgtttggttt ccattaactc cggagatcgt
     1741 aaatggaacg tcaatgcctg tttggttcat aggatatccg tcaacaaccg ccgtcacggt
     1801 aatcccattt gcttggtaca actgtgaaac gaggggaaca aaaataagtg tcataacaag
     1861 aagcactaat gcgccggaga gcatattaga gaatggtcca gctgcaaaaa ctgagatttg
     1921 tttccatatc gatatttttt ccagttcagt ttcttctggt tcgacaaatg cgccaagaat
     1981 gggaccaaaa aatgcaacac ctgaactttt tattggaaca tgaaacaacc gtgccacaac
     2041 gccatgggaa aactcatgga tcacagcaac aacaaaaata gcaaggatcc agtgccagaa
     2101 cgataacgta ggcgcaccag caatctgcac gccgggcaat agtggggcaa gagcaggtgc
     2161 tgtcccaggt acaaagatta atttccatgt ctctataaca agcgtgtaca gaataaagac
     2221 cataccagta aagcccacaa aaacaccggc gtatgcaagg aacgtaacaa accgaggaaa
     2281 tttcagtgca atggtatcca tcaaccttaa gccgagcttt gttctatata agaggagtat
     2341 tccctgggtc tggaacctat tcttgtaacg aaaatagaga aacaaaatga ttacataaaa
     2401 gacaagtata gacagaatat cccagttaat taccattgcc ctttttactt ttttgattta
     2461 agacttcttt gacttaatag gtctaaatgc tcgtccttga catgtccggc actttacttt
     2521 tccagcaagg attcgcccca tatcagtacg aaccttttgc ttacatcgcc tgcacacaaa
     2581 aatgcgacga aagatgcgtg caacagttgc ttcaaatttt accatggtta tgcgctatga
     2641 acttccttta cgattttatc atcaaggaca acccaataca ttacttgtac tccctcggta
     2701 actttttctt ttagatcctc aggaattatc aggtcaaatg tttcgtatgt ttgcaggtcc
     2761 atcacatttg cagt
//
LOCUS       DATDZU010000045         2981 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2285004, whole genome shotgun sequence.
ACCESSION   DATDZU010000045 DATDZU010000000
VERSION     DATDZU010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285004"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VJJ79_01420"
     CDS             <1..735
                     /locus_tag="VJJ79_01420"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HLC22411.1"
                     /translation="TPLEMYEDLLGFDKNRAITLEYENPFPAENKLSIILPETSTKFT
                     SRGKMMYEQIAAKCATIVNAVPGNTVVFFPSYALRDHIYEFLRNKCDKTLFLEDTAYT
                     KEQRGNLLERFKEYKDQGAVLLAVAGGSYSEGIDLPGDLLKAVVVVGLPLARPDLETQ
                     ELITYYDKRFGKGWDYGYVYPAIIKILQSAGRCIRSETDRGVVVFLDERYNWQNYKKC
                     FPSSMHTQIERNPLPLIQKFFLTENI"
     gene            complement(803..1750)
                     /locus_tag="VJJ79_01425"
     CDS             complement(803..1750)
                     /locus_tag="VJJ79_01425"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HLC22412.1"
                     /translation="MKRKVILMGGKTYVISLPAPWIRRHGIKKGEELDLVEEERSVVI
                     RTEHTKKLPSLKLNLDNADESLLVRTITTAYRLGYGELDLIFSSSVNNQRDQKKIKSL
                     IVIQDTCDQLIGFEIIKQTDTSCYIKDVAGADINEFEQILRRMFLMLNSFGRESFDAI
                     AVHDTNMLIELHRKHIVIRKFASYCQRYLNVKGTQGKTLLYHELVLGLLELSKTYRYM
                     TKVQLAQKHRYAKEVLEAYHATVDLQERFAMLFYTYSVEDARSVIASRILILDKINAL
                     SEKVAGKDIILLHRLPVLLNTLYSLVSVTMALHFEDEIG"
     gene            1905..2858
                     /locus_tag="VJJ79_01430"
     CDS             1905..2858
                     /locus_tag="VJJ79_01430"
                     /inference="COORDINATES: protein motif:HMM:NF033579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HLC22413.1"
                     /translation="MDNTNKLLNILDFSQVLLERLQIPLYSKQHSGKTFNNHQLFKLI
                     VLKSYFGKDYRRFIEFLEVSEIPKLIGLKRIPHFTTLQKFSARQKIQELEQLILESCS
                     LAKKKCKNVGIDATGMSLDFASKHYAQRIEKPILRRDFLKLNMFMDLDNLMILSAKIR
                     KKARHDTKDVKALWNKIKHLLFRKVFADKGYDADFFHEIVYKSGRKSVIFIKNPDVPI
                     WRTKGTFRKMAKKDARNHQKGKRSLTETVNSILKRVYGETIAAKKLCTQKIELLFRIL
                     TLNLERLSILIEKIFLLFFIFLRKRLFGAKSTKQIIYFYLL"
BASE COUNT          978 a          580 c          567 g          856 t
ORIGIN      
        1 acgccgcttg aaatgtatga agatctcctg ggcttcgaca aaaatcgtgc aattacctta
       61 gagtacgaaa atcccttccc tgcagagaac aagttatcga tcatccttcc agaaacatca
      121 acgaagttca cgtctagagg aaaaatgatg tacgagcaga ttgcagcaaa atgtgcaacg
      181 attgtcaacg cagtcccagg gaacacagtc gtcttctttc ctagctacgc tctgcgggac
      241 cacatctacg agtttctccg aaataaatgt gacaagacgt tattcctgga agatacagca
      301 tacacaaaag aacagcgtgg aaatctgtta gaacgcttca aagaatacaa ggaccagggg
      361 gcagtgttac ttgcagttgc tgggggtagc tattctgaag gaattgattt gcctggagat
      421 ttgttgaaag cagtggtagt ggtcggtctt ccccttgcac gacctgatct ggaaacacag
      481 gaacttatta catactatga caagcgcttt ggcaaaggct gggactacgg ctatgtctat
      541 ccagctatca taaaaatcct gcaaagtgct ggacgatgca ttcgcagtga aacagaccgt
      601 ggcgtcgtcg tgttcctcga tgaaaggtac aactggcaga actacaaaaa atgtttccca
      661 tcgagcatgc acacgcaaat agaacggaat ccgttaccat tgatccaaaa atttttcttg
      721 acggaaaata tataaaccag tttatttcta atagaaatat taagttctta tcattgttct
      781 aaacggacat tacgcaaaga actcacccaa tctcgtcttc gaagtgtaat gccatcgtca
      841 cgctaaccaa agaataaaga gtattcagga gcaccggcag acgatgcaac aggatgatat
      901 ctttgccagc tactttttct gacaacgcat taattttatc taggatgaga atacgtgaag
      961 caataacaga tcgcgcatct tcaacagaat aagtatagaa cagcatcgcg aaccgttctt
     1021 ggagatcaac tgttgcatgg tacgcctcaa gcacttcttt tgcatagcga tgcttttgtg
     1081 caagctgtac tttcgtcatg tatcggtacg ttttgctgag ctcaagcaat cccagaacaa
     1141 gttcatggta gagcaatgtc tttccttgag tacctttcac gttaagatag cgttggcaat
     1201 agctcgcaaa ctttcggata actatatgtt ttctatgtag ctcgattaac atgtttgtat
     1261 catgcacagc tatcgcatca aagctttccc ttccaaaaga attcagcatc agaaacattc
     1321 gccgaagaat ctgttcaaac tcattaatat cagcaccggc aacatcttta atatagcaag
     1381 acgtatccgt ttgtttgatg atttcaaagc caatcagctg atcacaagta tcctggatga
     1441 caatcagtga ttttatcttt ttctgatccc gctgattgtt cacagaagag gaaaaaatta
     1501 ggtccagttc cccatagcca agacgatacg cggtggtaat agtcctaaca agcaacgatt
     1561 cgtctgcatt atccaaattg agtttcaggg agggaagctt ttttgtatgc tctgttctga
     1621 taacaacgct gcgttcctcc tcgacaagat caagctcttc gcccttcttg atcccgtgcc
     1681 gcctgatcca aggcgcaggc agcgagataa cgtatgtctt gccccccata aggataactt
     1741 ttcgtttcac gctgctacga tggaagaaaa gtaattgttt ataagaattt gtatacgcag
     1801 agaaaaacag cggctttgta gaaaagataa gaattcttaa gccgtaaggc ttaagaacct
     1861 tgtttacacc ttaatattgt caatttatcg aggtggtaaa catgatggat aatacaaaca
     1921 aattattaaa cattttggat ttttcccaag ttttgcttga gcgacttcaa attccattat
     1981 attcaaaaca gcattctggt aagactttta ataatcatca gcttttcaaa ttaatcgtct
     2041 taaaaagcta ttttggtaaa gattatcgtc gatttattga gtttcttgaa gtttctgaga
     2101 taccaaagct tattggttta aaacgcatcc cccattttac taccttacaa aaattttctg
     2161 ctcggcagaa aattcaagaa ttggaacaac tgattcttga aagttgtagt ctcgctaaga
     2221 aaaaatgtaa aaatgttgga attgatgcaa cggggatgag tttagatttt gcatcaaaac
     2281 attatgcaca aaggattgaa aaaccaattc tccgtcgtga ctttcttaaa ctgaatatgt
     2341 ttatggactt agataatctt atgattctct ctgcaaaaat tagaaaaaaa gcaagacatg
     2401 atacaaagga cgttaaagca ttgtggaata aaatcaagca cctacttttc agaaaagttt
     2461 ttgcagataa gggatacgat gcagatttct ttcacgaaat cgtctacaaa tctggaagaa
     2521 aatcagtgat ttttatcaaa aatccagatg ttcctatctg gagaaccaaa ggaactttta
     2581 gaaaaatggc aaaaaaagat gcgagaaatc atcaaaaagg aaaaagaagt ttgactgaaa
     2641 cggtaaattc tatcttgaag agagtttatg gagaaactat cgctgcaaaa aagctgtgca
     2701 cacaaaaaat agaactactt ttcaggattt taactctcaa tctagagaga ttatcgatac
     2761 taatagaaaa aatatttttg ctctttttca ttttccttcg aaaaaggcta tttggtgcaa
     2821 aaagcaccaa acaaattatt tatttttacc tcttatagcc taggaatgca aaagtgttct
     2881 acagagccat attttgcaaa actttaaata gaaagacttc aattaaatat ctataaaaat
     2941 tgggtggtgc attgtatgaa ccaatggact tttctatcca t
//
LOCUS       DATDZU010000046         4617 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_870966, whole genome shotgun sequence.
ACCESSION   DATDZU010000046 DATDZU010000000
VERSION     DATDZU010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4617
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870966"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VJJ79_01435"
     CDS             <1..1008
                     /locus_tag="VJJ79_01435"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HLC22414.1"
                     /translation="CRRTSQKLTLRGAATGTFGGAVPADAIVSDMSKMNKILDIGSDW
                     VHVQAGVVLSDLNSFLRKKNKYFPVQPLEYPVCTIGGMIATNTSGLSYHYGRMENWVQ
                     ELEVVDGTGRTYTTSTATMKNFIGLEGSTGIIVSAKLKLLPQPPAKTSSIVAFNTMSA
                     MMGRVEQIEKNPHILSIEYFDERTSALLDLGQALHIIVEYDDESGVIKVPEEVKKIDE
                     LKEKVRHLLIRNHYSQKEDPKIPMENRGKFLHWLNKLEVPCFGHLKHGVFYPHFKEFS
                     KQPEEIYDIVEKLSGEVIGDCGVGIKRKKFLSKAKTEKFLILKNEYDPQRILNRGVLV
                     D"
     gene            992..1306
                     /locus_tag="VJJ79_01440"
     CDS             992..1306
                     /locus_tag="VJJ79_01440"
                     /inference="COORDINATES: protein motif:HMM:NF024924.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLC22415.1"
                     /translation="MCWLIKCNECGLCRENCPVFRVVKRESVSPRGFAVLTQKQKFDK
                     IMYVCSLCNNCKTVCPYGVDLKLNEMREYVLANGGETAALKSLMENLRNTGNPFGVVS
                     NH"
     gene            complement(1293..1601)
                     /locus_tag="VJJ79_01445"
     CDS             complement(1293..1601)
                     /locus_tag="VJJ79_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22416.1"
                     /translation="MIFPLFIGCTYFLYKGMQREDVLEEQFYLKANENMSWDLVEKTA
                     ELQERCTLLRYEFSQRDFIPGTEIYQERQDVLIESVDIYKEWGIPITLEYCLSAISGY
                     "
     gene            complement(1598..2176)
                     /locus_tag="VJJ79_01450"
     CDS             complement(1598..2176)
                     /locus_tag="VJJ79_01450"
                     /inference="COORDINATES: protein motif:HMM:NF002305.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosylase/DNA lyase"
                     /protein_id="HLC22417.1"
                     /translation="MKSSELSEHYQKNKKIISQRLNEFAVLRNEKETFRELCFCLLAA
                     NTSSHMASRVMEQVGDVIFTGNEEEIMERLHTLRCRFYKTRAHYISLAQNVPLTFDRN
                     YLVEHIKGFGYKESSHFLRNMGHKGHAILDKHILRSLAEFGVIPEVPKSLNKKRYLEI
                     EATMKQWSEKIGIPMDELDLVLWSRKTGEILK"
     gene            complement(2136..2675)
                     /locus_tag="VJJ79_01455"
     CDS             complement(2136..2675)
                     /locus_tag="VJJ79_01455"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside monophosphate kinase"
                     /protein_id="HLC22418.1"
                     /translation="MKIVICGRIGSGKSTTAQRIAKELDLKHYSDGDMMRALAIEKGV
                     KLETFVKQRSDAVDKMIDEKTMMIGKKEDNFIFDSRLAFHFIPDAIKIFLEVSEEVGS
                     ERIFKHQRKSEAPVKTAKELLKKNKERWETDRQRFKKLYGVDINDMKNYDIVIDTTIL
                     DVEGTVHEIKRALRALPKK"
     gene            complement(2712..3941)
                     /locus_tag="VJJ79_01460"
     CDS             complement(2712..3941)
                     /locus_tag="VJJ79_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013866437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit
                     gamma"
                     /protein_id="HLC22419.1"
                     /translation="MAKAKGEQPEISIGLVGHVDHGKTTITQALTGKWTDTHSEEVKR
                     GITIRLGYANATFYFCEKCEKYAVKETCTSCNGKGKKTRTVSFVDAPGHETLMATMLS
                     GSAIMDAALLLVAADELCPQPQTKEHLMALEICGIKDIIIVQNKIDLVSEEDAINNYK
                     EIKAFVKGTIAEHAPIIPISAINNVNIDLLIETIETHFKTPKRDLQKDPLMFIARSFD
                     INKPGTPIATIMGGVLGGAVKQGVLKGGDKVEIRPGRKVEREGKVTWVPLITEIIGIR
                     TDTESLEKALPGGSIALLTKLDPALVKADSVGGNVVGHIGKLPSVYSDLKLVPHLLKR
                     VVGSEKELTVESIKKGETLMLNVNAAATVGIVTELSKNSFTLKLKLPVCADKQDRITI
                     SRLLGHRFRLIGYATMK"
     gene            complement(4035..4325)
                     /locus_tag="VJJ79_01465"
     CDS             complement(4035..4325)
                     /locus_tag="VJJ79_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22420.1"
                     /translation="MKTYTTKSVLIARKKRLSTDDDDFRPCFISLFDENNPHLSTRGP
                     KEVVEFPRVHKVVIEGLKVDYLLLGNDLVINNLTKVEVEERNYMVIVRGVQQ"
     gene            complement(4360..>4617)
                     /locus_tag="VJJ79_01470"
     CDS             complement(4360..>4617)
                     /locus_tag="VJJ79_01470"
                     /inference="COORDINATES: protein motif:HMM:NF013273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S6e family ribosomal protein"
                     /protein_id="HLC22421.1"
                     /translation="FSIRGASDFAGFPLRKDVEGPVRKKVLMGHGVGNRTGGNNLKFR
                     KTVSGNAITPRTVQVNLMVTQYGTKALDDVLGKKEDAQPGQ"
BASE COUNT         1202 a         1028 c          977 g         1410 t
ORIGIN      
        1 tgccgtcgga cctcgcagaa gttaaccctt cgtggtgcgg caacagggac gtttggtggc
       61 gcagtacctg cagatgcaat tgtctctgat atgtcaaaaa tgaacaagat tttagatatc
      121 ggctccgact gggtgcacgt ccaagcaggt gtcgtgcttt ctgatctgaa cagtttcttg
      181 cgcaaaaaaa ataaatattt tccggtgcag ccattagaat atccggtctg cactattggt
      241 ggcatgattg caacgaacac atctggcttg agctaccatt atggtcgcat ggaaaactgg
      301 gtgcaggagc tcgaagttgt tgacggtact gggcgcacat acaccacgag cacagcaacg
      361 atgaaaaatt ttatcggcct tgaaggttca acaggaatta ttgtgtctgc aaagctcaag
      421 cttcttcctc agccacctgc aaagacctct tcaattgtcg cgttcaacac gatgtctgcg
      481 atgatgggca gagtggaaca gattgaaaaa aatccgcaca ttctatcaat agaatacttt
      541 gatgaaagaa cctctgcact tctggacctc gggcaagcat tgcatattat cgtcgagtac
      601 gatgacgagt ctggcgtgat caaggttccg gaagaagtaa aaaaaattga cgagcttaaa
      661 gaaaaagtac ggcaccttct aatacgaaat cattactcac aaaaagaaga cccaaaaatc
      721 ccgatggaaa accgtggaaa gtttttgcac tggctcaata aactagaagt gccctgcttt
      781 ggtcacctga aacacggcgt tttttatccg cattttaaag aattctcaaa gcaaccagaa
      841 gaaatttacg atatagttga aaaactttct ggagaagtta tcggcgactg tggggtcggg
      901 atcaagagaa aaaagtttct gagtaaagcc aaaacggaaa agtttttaat cttgaagaac
      961 gagtatgatc cccagcgaat attaaacagg ggtgtgttgg ttgattaaat gcaatgaatg
     1021 cggtttgtgc agggaaaatt gcccagtatt tcgcgtcgtg aaaagagaaa gcgtttctcc
     1081 taggggcttt gcggttctca cacagaaaca aaagtttgat aaaattatgt atgtgtgttc
     1141 tctctgtaac aattgtaaaa ctgtttgtcc atatggtgtt gatttgaagc tgaatgaaat
     1201 gcgtgagtac gtgcttgcaa atggcggtga aactgccgcg ctaaaatcac tgatggaaaa
     1261 cttgaggaac acaggcaacc cttttggagt tgttagtaac cactaattgc gctaaggcaa
     1321 tattccaacg ttattggtat gccccattct ttgtaaatgt cgacagattc aataagaaca
     1381 tcttgccgtt cttggtaaat ttcggttcca ggaataaaat ctctctggga aaactcatac
     1441 cggagaagcg tacacctctc ctgcagttct gcagtttttt cgacaaggtc ccagctcatg
     1501 ttctcatttg ctttcaagta aaattgttct tcaagcacat cttcacgttg catgcctttg
     1561 tataaaaaat aagtgcatcc gataaaaagc ggaaatatca ttttaaaatt tctccagttt
     1621 ttctcgacca taaaactagg tcaagttcat ccatgggaat cccaatcttt tctgaccatt
     1681 gtttcattgt tgcttcaatt tcaaggtaac gttttttatt taatgatttc gggacttcag
     1741 gaatcacgcc aaattctgca aggctgcgaa gtatatgctt gtctaggatc gcgtgcccct
     1801 tgtgccccat gtttcgtaaa aaatgcgagc tttccttgta tccaaacccc ttgatatgct
     1861 cgacgagata gttcctgtca aatgtcaatg gcacgttctg tgcgagagaa atatagtgcg
     1921 cccgtgtttt gtaaaatctg caccgcagcg tatgcagccg ttccataatt tcttcctcat
     1981 tcccggtaaa gattacgtcg cctacctgtt ccatgactcg gcttgccatg tgtgatgacg
     2041 tgtttgctgc gagaagacag aagcagagct cgcgaaacgt ttctttctca tttcttagca
     2101 ctgcaaattc attcagtcgc tgagaaataa tctttttatt tttttggtaa tgctctgaga
     2161 gctcgcttga tttcatggac agtaccttcg acatcgagta tggtcgtgtc gataacaata
     2221 tcataatttt tcatgtcatt aatgtcaacg ccgtacagtt ttttaaaccg ttgcctgtca
     2281 gtctcccacc gttccttgtt ttttttgaga agctcttttg cagtcttcac aggagcttca
     2341 cttttccgtt ggtgcttgaa gattcgttca gatccgactt cttcagatac ctcaagaaaa
     2401 attttaattg catcaggaat aaaatgaaac gcaagtctgc tgtcaaaaat aaaattgtct
     2461 tctttttttc cgatcatcat tgttttttca tcaatcatct tatcaacagc atcagagcgt
     2521 tgcttcacaa atgtttccag cttcacacct ttctcaattg ccagcgcccg catcatgtca
     2581 ccgtcagaat aatgtttcag gtcaagctct tttgcaatcc gttgtgcagt cgtagatttt
     2641 ccagagccga tccttccaca aataacaatt ttcatacgaa tgagaatctt tttcagagtt
     2701 taaaaaaatt gtcatttcat agtggcatag ccaatcaacc ggaacctgtg cccgagaagg
     2761 cgagaaatcg tgatcctgtc ctgtttatct gcacatacgg gaagcttgag tttgagggta
     2821 aatgaattct tgcttagttc tgtgacaatc ccaaccgtcg ccgcagcgtt cacgttcagc
     2881 atgagtgttt ctcctttctt gatagattca acagtcaatt ctttttcaga tccgacaaca
     2941 cgtttcagga ggtgcggtac cagcttaaga tcagaatata ctgacggtaa ctttccgata
     3001 tgtcccacaa catttccacc gacagaatct gcttttacca gtgcagggtc aagctttgtc
     3061 agtaatgcaa tcgatccgcc gggcagtgct ttttctagcg attcagtgtc agtgcgaatg
     3121 ccgataattt ctgtgatgag cggcacccag gttacttttc cttctcgctc tacttttcta
     3181 cctggtcgga tttcaacctt gtcgccacct ttgagcaccc cctgcttgac ggcaccgccg
     3241 agaactccgc ccataatggt tgcgataggc gttccgggtt tgttaatgtc aaagcttcgc
     3301 gcaataaaca tcagcggatc tttttgcagg tcgcgcttcg gcgtcttgaa gtgagtttca
     3361 atagtttcaa taagcaggtc gatgttgacg ttattgatag cagatatcgg gatgattggc
     3421 gcatgttctg cgatggttcc tttaacgaat gctttaattt ctttgtaatt gtttattgca
     3481 tcctcctcgc ttaccaggtc gattttattt tggacaatga tgatatcttt gatgccgcaa
     3541 atttccagcg ccatgaggtg ctcttttgtt tgtggctgtg ggcacagttc gtctgcagca
     3601 acgaggagca gtgcagcgtc catgatcgcg cttccggaaa gcatagttgc catcagcgtt
     3661 tcgtgtcctg gcgcgtcaac gaatgaaact gtccgcgtct tcttcccttt tccattacag
     3721 ctcgtgcacg tttccttgac agcatatttt tcacattttt cacagaaata gaatgtagca
     3781 tttgcataac cgagcctgat cgtgatcccc cgctttactt cttcagaatg tgtatcagtc
     3841 cattttccag tgagcgcttg agtaattgtg gtctttccat ggtcgacatg acctacgaga
     3901 ccgatgctga tttcaggctg ttctcctttt gcttttgcca tggcgcagac gaacttttgt
     3961 ctctttataa atttatcttg gagaaaaaat tgagctagaa gtctcaccag aaaaatcggt
     4021 aaactgttcc gttgttactg ctgcacgccg cggacgataa ccatatagtt gcgttcttcg
     4081 acttctacct ttgtgaggtt attaattacc aaatcgtttc ccagcaaaag atagtcgact
     4141 ttgagtcctt cgataaccac tttatggact cgcggaaatt ctactacttc ttttggaccg
     4201 cgcgtgctca ggtgcggatt gttctcatca aacaagctga tgaagcatgg tcggaaatca
     4261 tcatcatcag tactcagccg cttcttgcgc gcaattagaa cactttttgt tgtataagtt
     4321 ttcatagcaa ccccttgtga aagatgagca gaaggaattt tattgcccag gctgtgcatc
     4381 ttcttttttt ccaaggacat catcgagtgc ttttgtgcca tattgtgtga ccatgagatt
     4441 tacttgcacg gttcgtggag taatcgcgtt gccactcact gtttttcgaa acttcaaatt
     4501 gtttcctcca gtgcgattgc ctacgccatg acccatgaga actttttttc gaacaggccc
     4561 ttccacatct tttcgtaatg gaaaccctgc aaaatcgcta gcgcctcgga tactaaa
//
LOCUS       DATDZU010000047         3485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_620129, whole genome shotgun sequence.
ACCESSION   DATDZU010000047 DATDZU010000000
VERSION     DATDZU010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620129"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VJJ79_01475"
     CDS             <1..454
                     /locus_tag="VJJ79_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22422.1"
                     /translation="EEHPVPEKRHLFATLKTRLFQKNKHAVKNKFTLFKESAPVVLKE
                     PLPILQLPKKKERPEPFIPRAEPSMTTLETPAFVDSWKRTQDLLENCQRCIKRQDLDR
                     GEIYYEELKPLFSKLSREEKHQVYPLLVELQNQLVMLRFKKVKQSLKR"
     gene            complement(451..1623)
                     /locus_tag="VJJ79_01480"
     CDS             complement(451..1623)
                     /locus_tag="VJJ79_01480"
                     /inference="COORDINATES: protein motif:HMM:NF003229.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication factor C large subunit"
                     /protein_id="HLC22423.1"
                     /translation="MTTPWVKKYQPQITKDIIGQETALLKIKEGIAKKKILLLYGPTG
                     TGKTSAIHALGKESNLEVFEVNSSDTRNKGAMETILGNALKQKSLFSKGKIILIDDID
                     AVSGQKDRGGLAAMTALFEKNPYPIILTCIDPWDEKFSIVRKKATLVGFQSLKKDLLL
                     SHLKSICEKENITCTKETLDTLAKESRGDVRAAINDLQTHSLTGTVVLEDNGERDKEE
                     DMLVCLRKILKNKRWEDAYNIFDKTTVDINECFLWIDENLPKEYRGEDLKKAYHYLSR
                     ADVFNGRIRRQQHWRFLIYINTLLTAGIATAKKEANPECIEYTKTSRILKMWIAKNRN
                     AKKRSIAEKIAEKTHMSKKRAFTEMFPYLKATLNNEAMKKELKLDEEEIEWLKKKF"
     gene            complement(1604..2155)
                     /locus_tag="VJJ79_01485"
     CDS             complement(1604..2155)
                     /locus_tag="VJJ79_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22424.1"
                     /translation="MKLSQLFQKGTVVPLSQIHKWITAHVEFSLAKEELELKGALIQL
                     DETMKNWEDRKKSVSVVRSFLKKTTGPNKFDVKSLQKYNEQLEKRLKDLRKKIGRGKD
                     TKDILTGLERIEAARKKLEIAQNNLEKKETLHRLLRHLEKHLVGRDKEGVFEAEILKD
                     IQRIQKCLKALGFSVQIHDDTLG"
     gene            complement(2152..3099)
                     /locus_tag="VJJ79_01490"
     CDS             complement(2152..3099)
                     /locus_tag="VJJ79_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication factor C small subunit"
                     /protein_id="HLC22425.1"
                     /translation="MSSTIWTEKYRPRTFDEVQGQKKIVEKVRAFVAQKNMPHILFAG
                     PPGVGKSTTALIIARELFGETWKQNFLELNSSDERGIDVVRETIKEFAKTKAIGNVPF
                     KIIFLDECDSLTKEAQQALRRTMETYALTTRFIMSANFSSKIIDPIQSRCTVFRFKPL
                     TEEEIKVYVEKIAKEEGLELGENTMHALLDISDGDVRRITNILQSCASVEKKVTEEVV
                     YSLVSAAKPKEIKEILALAIQGEFIKARTLLLDTMLKHGLSGLDMLKQIQKETVSIEG
                     ISDAKKMELIDKCGEIEFRMVEGADEFVQLEALLACYAK"
     gene            complement(3145..>3485)
                     /locus_tag="VJJ79_01495"
     CDS             complement(3145..>3485)
                     /locus_tag="VJJ79_01495"
                     /inference="COORDINATES: protein motif:HMM:NF014047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HLC22426.1"
                     /translation="RMEDDRDSRGFAKPVQQGDEVEVTIESTGAKGDGVAKVNNFVII
                     VPGAKEGEKVKVRITRVLRKMAFGEIVGGASEEEASKEETEESSDEEESDESQSEEEP
                     SEESDSNEEE"
BASE COUNT          817 a          781 c          664 g         1223 t
ORIGIN      
        1 cgaagagcat cctgttcctg aaaaaagaca tttgtttgca acgctcaaga ctcgcttgtt
       61 ccaaaaaaac aaacatgcag taaaaaataa gtttacttta ttcaaagaat ctgcacccgt
      121 tgttctcaaa gaaccgcttc cgattcttca gcttcctaag aaaaaagaaa gaccagaacc
      181 attcatccct cgagcagagc cgtcaatgac tactcttgaa actcctgcat tcgttgattc
      241 ctggaaaaga acacaagatc ttcttgagaa ttgccagcgg tgcatcaagc gacaagacct
      301 tgacagggga gaaatctatt acgaagaact taagccgtta ttttcaaagc tctcccggga
      361 agaaaaacat caggtctatc cactattagt tgaattacag aaccagcttg tcatgttacg
      421 gtttaagaaa gtgaagcaaa gcctgaagcg ctaaaacttt ttcttgagcc actcgatctc
      481 ttcttcatca agcttgagct cttttttcat tgcttcattg tttagtgttg ctttaagata
      541 aggaaacatt tctgtgaacg cgcgtttttt tgacatatgt gttttttccg caatcttttc
      601 tgcaatagat cgcttttttg catttcggtt ctttgcaatc cacatcttaa gaattctgga
      661 cgtttttgtg tactcaatgc attcaggatt tgcttctttt tttgcagttg caatgcctgc
      721 ggtgagcaac gtattaatat atataagaaa acgccagtgc tgttgtcgtc taattcttcc
      781 gttaaacaca tcggctcttg aaaggtagtg gtacgctttt tttaggtctt ctccccgata
      841 ctctttagga aggttttcgt cgatccagag gaagcattcg ttgatgtcca cagttgtttt
      901 gtcaaagata ttgtatgcat cttcccatcg cttatttttt aaaatttttc gcaaacacac
      961 gagcatgtcc tcttccttgt ctctctcgcc attgtcttca agcactactg ttcccgtgag
     1021 actatgggtc tgtaggtcgt tgattgcagc gcgcacgtct cctcgacttt cttttgcaag
     1081 tgtatcgagt gtctctttcg tgcatgtgat gttttctttc tcgcaaatgc ttttgaggtg
     1141 ggaaagaagc aggtcctttt ttagggattg aaatcctacc aatgttgctt tttttcggac
     1201 tatagaaaac ttctcgtccc atggatcaat gcaggtaagg ataattgggt agggattttt
     1261 ttcgaagagt gcagtcatgg ctgcaagccc gcccctgtct ttctgtccgc tgactgcgtc
     1321 aatgtcgtct ataagtataa tttttccttt tgaaaataaa ctcttttgct tgagtgcatt
     1381 gccgaggatt gtttccattg cccccttgtt gcgcgtgtca gaagaattta cctcaaacac
     1441 ttcaagattg ctttctttgc ctagggcatg gattgcagat gttttcccag ttcccgtggg
     1501 accatacaga agaagaattt ttttctttgc gattccttct tttattttca ggagcgcagt
     1561 ctcttgtcca ataatgtctt tagttatttg tggttgatac tttttaaccc agggtgtcgt
     1621 catgtatctg tacagaaaat cctaatgctt taaggcattt ttgtatccgt tgtatatctt
     1681 ttagaatctc tgcttcaaat acgccttctt tgtctcttcc tacaaggtgc ttttcaagat
     1741 gccgaagcaa ccggtgcagt gtttcctttt tctcgagatt attttgcgcg atttctaatt
     1801 tctttctggc agcctcaatt cgttccagtc cagtaagaat atcctttgtg tcttttcctc
     1861 gcccaatctt ttttcgcagg tccttgagcc gtttctctag ttgttcatta tacttttgta
     1921 acgatttcac gtcaaacttg ttaggtccag ttgttttttt gagaaaggat cgcacaacag
     1981 agacagattt ttttctatct tcccaattct tcattgtttc atcgagctga atgagtgcgc
     2041 ctttgagctc gagctcttcc tttgcgagag aaaattctac gtgcgcggta atccatttat
     2101 gaatctgaga aaggggaact accgtacctt tttgaaataa ttgcgaaagt ttcatttggc
     2161 gtagcacgca agtagtgctt ctaattggac gaattcgtca gcaccttcca ccatgcgaaa
     2221 ctcaatctcg ccgcacttat caatgagttc catttttttt gcgtcactga ttccttctat
     2281 actgacagtt tctttttgga tttgcttcag catatctagg ccggaaaggc catgcttgag
     2341 cattgtgtcc agcaacagag ttcgtgcttt gataaactcg ccctgtatag ctaaggcaag
     2401 tatctctttt atttcttttg gttttgccgc ggacactaaa gagtagacca cttcttccgt
     2461 cacctttttt tctactgatg cacagctctg caaaatgttc gtaattcttc gcacatcgcc
     2521 atcgctaata tcgaggagcg catgcatcgt attctcccca agctccaatc cttcttcttt
     2581 tgcaatcttt tcgacatata cttttatttc ctcttcagtt aacggcttaa agcgaaagac
     2641 tgtgcatcga ctttggatcg ggtcgataat cttcgatgaa aaatttgctg acatgataaa
     2701 tcgggtggtt agcgcgtagg tttccatggt tctccgaagc gcttgctgtg cctcctttgt
     2761 caacgagtcg cattcgtcta aaaaaataat cttaaatggg acattaccta tagcttttgt
     2821 ctttgcgaac tctttaattg tttcccgaac aacgtcaatc cctctctcgt cgctgctgtt
     2881 caactcgaga aagttttgtt tccaggtttc tccaaaaagc tcgcgcgcga taatgagtgc
     2941 tgttgttgat ttccctacgc ctggaggacc agcaaataga atgtgcggca tgttcttttg
     3001 cgctacaaat gcccttactt tttcaactat ttttttctga ccctgaacct cgtcaaatgt
     3061 tcgtggtcga tacttttctg tccagatagt agaagacatg aaataaagag aaaaaagtaa
     3121 ttttataagt ttttgtattc tggtttactc ttcttcgtta gagtcgcttt cttcagaagg
     3181 ttcttcttca ctttgggact cgtcggactc ttcttcgtca gacgattctt cagtttcttc
     3241 tttagaagct tcttcttcag aagcgccacc aacaatttcg ccgaaagcca tttttcgtag
     3301 tactcgtgta atgcgaactt ttactttttc gccttctttt gcaccaggca ctatgatcac
     3361 aaagttattg acctttgcta caccgtcgcc ttttgcgcca gtactttcta ttgttacttc
     3421 gacttcgtct ccttgttgga cgggttttgc aaaccctctt gaatctctgt catcttccat
     3481 tcttt
//
LOCUS       DATDZU010000048         5945 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2072369, whole genome shotgun sequence.
ACCESSION   DATDZU010000048 DATDZU010000000
VERSION     DATDZU010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5945
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2072369"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..813
                     /locus_tag="VJJ79_01500"
     CDS             247..813
                     /locus_tag="VJJ79_01500"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018084436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HLC22427.1"
                     /translation="MPNDIFQKDTKAVAKELLGMSLVHETKEGKTVGKIVETEAYLQR
                     DPGSHSHKGMTPRNAQMFGKAGTAYVYFIYGMYHCFNIVTNKEGIGEAVLIRALQPVN
                     GIELMKKRRKTDDIRNLCSGPGKLVIAMGITKHHNGADLLTGTIRLLPRKKNKKIDIV
                     TCTRVGISIGKELPYRFYIKNNPFISKP"
     gene            complement(797..1738)
                     /locus_tag="VJJ79_01505"
     CDS             complement(797..1738)
                     /locus_tag="VJJ79_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22428.1"
                     /translation="MAINIIIEPHKVYENWEDFRQQKPPFSIALDGIVNDITRREYTR
                     EPYANFDHHANVDRLATRSTCGQVQMEICTGLLSRIFVKDGVPTATGYINKPDEDACT
                     ATWLLIHHEKVEKEKNRALKDLIEAEDKLDATGGMYPLNDLEMLKKMAWVFAPYCHVR
                     FERILGRMSAQEQKENVLDEVHKRITEHVTHGGGELELEGQYEILGGGANWVMVKEIG
                     ISARYAMFGNGIRAYVTFRGEYPSGRYHYAFGRAPGENFPIPYFYDCLNAIETGIVTG
                     KNFWGGGDNHGGSPQETGSLFPPKRLIEFLNQSMALR"
     gene            1886..3376
                     /locus_tag="VJJ79_01510"
     CDS             1886..3376
                     /locus_tag="VJJ79_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22429.1"
                     /translation="MKGFVPYITSSFLSAFAICHSPVYSIQLTTAPIQENTSVVQDAS
                     WTAQIEREIRKNDSWVEWYIEQNYTNATQEGYAHLRRVPRERQGDTFVNPNNPSGVVF
                     LGMWDPQYDLLEFPDPWDEEHGTSVLGAVDHELWHAFYRNGKGVLSMEGFNGPTTPQI
                     GQYCYERSGSKEYLPVAQEIETTVREAEVSIFIATEETRVNYIKELYVRNQNSSGLEA
                     LLTEDEKQMIQSDQQRISIRVLEYAMTLSTIESAYNSFTENVDSDTDPILFEKGMVGM
                     KKYVEKLAPYKTIEEEIFDVNEMHRYIFYNAIAREVNIPIVALEKKLAMTPAEQQDAL
                     LHDLRALEQKQQEYLALVPRGFVDDVLVLRAQNLVSTRDKIIQETKMRFRARLFDPDE
                     FMGRVFDSLYSLYYGPYTYQAAPLNEKDLAFLESFTYNGQPVFRKGVEKYRVGLEMIA
                     DGKKPEDIKELLEYAISLEYKGKMYSWPEANFHLVLTGGELPVAEN"
     gene            complement(3373..4515)
                     /locus_tag="VJJ79_01515"
     CDS             complement(3373..4515)
                     /locus_tag="VJJ79_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22430.1"
                     /translation="MGEHEKETQKINITTFPGLEGLIDPISQCITVANIEREYFGLQV
                     PENYSVYAHLFSLNNQAGAVEPVGGEYVLHVYIANSLRHRVVPEQIEKLDRLKCYLLH
                     VKDLFPSYSEEIIFTPLRVEGILANDFLPQSSLRKEAREYVLHHAAGTRDDLASVIPH
                     FVEQFPKCGMTVIRHELDHIDFMESTIFQDYRRKLGNVADMKTKYEEGTGSIYEYEEA
                     NTEVIEAYCFLYTFMESRALFFTHTKAGFNDTDYDAVAKQVVRTLSSWYVENFFPQNI
                     LEYLLAPLELNGTINKDTATYCRHVTNIHNFDARKYRYDLKLVDESLANDIVLRSLER
                     WKTKCSDLATGLVPVIRRIFQEDPSRFTRAQEKTTYKEFLAACNGN"
     gene            4627..>5945
                     /locus_tag="VJJ79_01520"
     CDS             4627..>5945
                     /locus_tag="VJJ79_01520"
                     /inference="COORDINATES: protein motif:HMM:NF026066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HLC22431.1"
                     /translation="MRKNADVAKILYEVADLLEIQDVQWKPQAYRKAAQAIENLQEDI
                     ETVIEEGRLEDLPGVGTHIAEKVKEIVKTGKLQYLNTLKKHVPIDVESLSSIEGLGPK
                     TLKYLYKKLHVKNLADLKKAAMAGKIKALKGMGEKKEKMILEGVKLVQKRGPKRLLLG
                     SITPLADEICSLLKKVDGVQQTTIAGSYRRGLAMIGDIDILLISSKPKKAMDAFVSIP
                     DIEKVLAHGERRSSIRLRNGLQVDARALKKEQYGSALLYFTGSKEHNVAVRKRALKKG
                     LTLSEYGLFTVRGKKLVASTTEDAVYKRLGMQYIPPEMREDRGEIELALKKKIPALIS
                     WKDIRGDFQTQTKWSDGADSIEEMAAYAERLGWKFLVITDHVGGIGIARPLDEKRLAK
                     QAKEIDAINKKSSVHIFKGAEIDIKKNGELALSKKACGALDVVLASV"
BASE COUNT         1774 a         1303 c         1290 g         1578 t
ORIGIN      
        1 ttctaggact tcacgcgttc catcaattga tccagtatct acaatcacag cctcttctac
       61 aaatggcaca gttgaattga caaaatcgag aatgcctccg gcggggttta taatttcatc
      121 tttgacaata gcacacaggg atgtgttttc gaggacaacc atacgttttt ttgccaaact
      181 ttctctttaa aaatgtattc cttctacaaa ataaactttt taagcaggca agcatttctt
      241 cctcttatgc ccaatgatat ttttcagaaa gatacaaaag ctgtcgcaaa ggagcttctc
      301 ggcatgtccc tcgttcacga gacaaaggaa ggaaaaactg tcggaaagat tgtcgagacg
      361 gaagcgtact tgcagcgaga tcctgggtcg cattcgcata aaggaatgac gccacgcaac
      421 gcgcaaatgt tcgggaaagc gggaactgcg tatgtctatt ttatctacgg catgtaccat
      481 tgctttaaca tcgtgacaaa caaggaagga atcggcgaag cggtgctgat ccgtgcgctt
      541 caacccgtca acggaatcga gctgatgaaa aagcgaagaa aaactgatga tatccgaaac
      601 ctctgcagcg gtcctggaaa attagtgatt gcgatgggca tcacgaaaca ccataacggc
      661 gcggaccttc tcaccggtac cattcgtctc ctgccgcgaa agaagaacaa aaaaatagat
      721 atcgtgacat gcacacgcgt tggtatttca atcgggaaag aattaccgta tcgcttttat
      781 atcaaaaata atccgtttat ctcaaagcca tagactgatt gagaaattct ataagtcttt
      841 ttggtgggaa caagcttcct gtttcctgag gagaacctcc gtgattatcg ccgccgcccc
      901 aaaagttttt tcccgtaact attcctgttt ctattgcatt caaacaatca taaaaataag
      961 gaattggaaa gttctctcct ggcgcccttc caaatgcata atggtaccgc cctgaaggat
     1021 attcccccct aaatgttaca taggcacgga tcccgttgcc aaacattgca tagcgtgcag
     1081 aaattcctat ttctttaacc ataacccaat tcgcgccacc gccgaggatt tcgtactgtc
     1141 cttccagctc taactcgccg ccgccgtgcg tcacatgttc ggtgatacgc ttgtgcactt
     1201 catcgagcac gttttctttt tgctcctgtg cactcatccg cccgagaatc ctttcaaacc
     1261 gcacatgaca atatggtgca aaaacccaag ccatcttttt aagcatctct agatcgttca
     1321 atgggtacat tccccctgtc gcatcaagct tatcttccgc ctctataaga tctttgagtg
     1381 cccgattctt ttctttctcc actttttcat gatgaataag aagccacgtt gctgtgcatg
     1441 catcttcatc aggtttattg atgtatcccg ttgccgttgg aacaccatct ttgacaaata
     1501 tacgagacaa cagccctgtg caaatttcca tctggacctg gccacacgta gaacgagttg
     1561 cgagacggtc gacatttgca tgatggtcaa aatttgcata cggttcacgt gtgtactctc
     1621 gccgcgtgat gtcattcaca ataccgtcta atgcgatgga aaatggcggc ttctgttgcc
     1681 ggaaatcttc ccaattttca tacactttgt gtggttctat gatgatgtta atagccatag
     1741 aaagatacca ctcctgttca tatcacttaa ctttaaatac atatctttat tattttgcct
     1801 ctttgtggta gtatcaatta atttttatag ttcggtgcaa tgtacataga agggttacat
     1861 atcttcctcc tagactgagg acgtaatgaa ggggtttgta ccatacatca ccagcagctt
     1921 tttgtctgca ttcgcaatat gccattctcc tgtttattct atacaactta ccactgcccc
     1981 tattcaagaa aatacctccg ttgtacaaga cgcctcgtgg accgcgcaaa ttgaaaggga
     2041 aattcgcaag aatgattctt gggtagaatg gtatatcgaa caaaattata ccaacgcaac
     2101 ccaggaaggg tatgcacacc tgcgccgtgt tccacgagag aggcaggggg atacatttgt
     2161 aaacccaaat aatccttctg gagttgtttt cctaggcatg tgggatccac aatacgatct
     2221 acttgaattc ccagacccgt gggacgagga acatggcact tctgttcttg gagctgttga
     2281 tcatgaactc tggcacgcat tctatagaaa cgggaaagga gtactttcca tggaagggtt
     2341 caatgggcca accactccac aaattgggca gtattgctac gaacgaagcg gaagcaaaga
     2401 ataccttcca gttgcacaag agatagaaac gactgtacgt gaagcggagg tttccatctt
     2461 tatcgcaaca gaagaaacac gcgtgaacta tatcaaagaa ctgtacgtgc ggaaccagaa
     2521 cagctcaggt ctggaagcat tgctcacgga agatgaaaaa cagatgatac aatcagatca
     2581 acaaagaatt tccatacgtg ttctggaata tgcgatgacc ttgtcgacca ttgaatctgc
     2641 atacaactcc ttcacggaaa acgttgattc agatacagat cctatcctat ttgaaaaagg
     2701 gatggtagga atgaaaaaat acgtggagaa acttgcacct tacaaaacta ttgaagaaga
     2761 aatttttgat gtgaatgaaa tgcatcgcta cattttttac aatgccattg ctcgcgaggt
     2821 aaacatacct atcgttgcgc tggaaaaaaa acttgccatg actcctgcag aacagcaaga
     2881 cgcattgctt catgacctgc gggcactaga acaaaaacag caagaatacc ttgcactcgt
     2941 gccacgaggg tttgtggatg acgtcctcgt gcttcgcgca cagaatcttg ttagcacgcg
     3001 tgacaaaata attcaagaaa caaaaatgag attccgtgca cggttgttcg acccagatga
     3061 attcatggga agagtctttg atagtctcta ctccttatat tatggaccgt acacttacca
     3121 agcagcacca ttgaacgaga aagatttagc gttccttgaa tccttcacct ataatggcca
     3181 gcccgtgttc aggaaagggg ttgagaaata tcgcgtagga cttgaaatga ttgcagatgg
     3241 aaaaaaacca gaagacatca aagaacttct cgagtatgcc atatcgttag agtacaaagg
     3301 aaagatgtat tcttggcctg aggcaaactt tcacttggtg ctcactggcg gcgaactgcc
     3361 tgttgctgaa aactaatttc cgttacacgc ggctaagaat tctttgtacg ttgttttttc
     3421 ctgtgcgcgc gtaaacctag acggatcttc ttgaaagata cggcgaatga cgggaacgag
     3481 gcctgttgca aggtcggaac attttgtttt ccagcgttcc agactcctaa gaacaatatc
     3541 attagcaagc gattcatcta ctaatttcag atcatatcga tactttcgcg catcaaagtt
     3601 atgaatattg gtaacatgac gacagtatgt tgcggtgtcc ttattgatag taccattcag
     3661 ctctaaaggt gcaaggaggt actcaagaat attttgcgga aagaaatttt ctacatacca
     3721 tgacgataat gttctcacta cttgttttgc aacggcatca tagtccgtgt cattaaagcc
     3781 ggcttttgta tgcgtgaaaa aaagcgcacg actttccata aatgtataaa ggaaacaata
     3841 tgcctcaata acttctgtat ttgcctcttc atattcataa atagagcctg ttccttcctc
     3901 atactttgtc ttcatatcag caacattccc tagctttctc ctatagtctt gaaagatcgt
     3961 tgattccatg aaatcaatat gatcaagctc gtgacgaatc acagtcatcc cgcacttagg
     4021 aaattgttcc acgaagtggg ggattacact ggcaagatca tccctagttc ccgcagcatg
     4081 atgtagcaca tactctcgcg cttcttttcg taaagaagat tgtggcaaga aatcgttagc
     4141 aagtatgccc tctacccgaa ggggagtaaa gattatttcc tcagaataac tagggaatag
     4201 gtcttttaca tgcaaaaggt aacacttcaa gcgatctaac ttttctattt gttcaggcac
     4261 taccctatgc ctaagagaat tagcaatata gacatgcagg acatactccc cgcctactgg
     4321 ttctactgcc cctgcttggt tattcagcga aaaaagatgc gcatagacag aataattttc
     4381 tggtacttgc agaccaaaat attcgcgttc aatatttgca acagttatac attgagaaat
     4441 cggatcaata aggccttcaa gaccaggaaa cgttgtaata tttattttct gagtttcctt
     4501 ctcgtgttcg cccatagcat ggtgcatttt taaagcagtt tatatggttt atggtttcgc
     4561 ttctatagag attaatgata ttttctagga gtaccttttt aaatttctct tcctctgtat
     4621 agcactatgc gcaagaatgc agacgttgca aaaattctgt acgaagttgc cgaccttcta
     4681 gaaatccaag atgtgcagtg gaagccgcaa gcgtaccgga aagcggcgca ggcgattgaa
     4741 aacttgcagg aagacattga aactgtaatt gaagaagggc gactcgaaga tctccccggt
     4801 gtcggcacgc atatcgcaga aaaagttaaa gagattgtca aaacagggaa attacagtac
     4861 cttaatacgc tgaagaaaca cgtgccaatt gacgtcgagt ctctttcgag catcgaagga
     4921 cttgggccga agacattgaa atatctctat aaaaaactgc acgtgaaaaa tcttgccgac
     4981 ttaaaaaaag ctgcaatggc aggaaaaatc aaggcgttga aagggatggg cgaaaaaaag
     5041 gaaaagatga tcctcgaagg cgtgaagctc gttcagaaac gtggaccgaa aagattgtta
     5101 cttggttcta ttactccgtt ggcagacgag atttgttcgc tgctgaaaaa agtagacggg
     5161 gtacaacaga caacaattgc tgggtcgtac cggcgcggtc ttgcaatgat tggcgacatt
     5221 gacattctct taatctcctc aaaaccaaaa aaagcaatgg acgcgtttgt ttctattcct
     5281 gacatcgaaa aagtactggc acacggggaa cgacgaagca gcatccgatt acgcaacggc
     5341 ttgcaggtgg atgcgcgcgc gctgaagaaa gaacaatatg gctctgcact tctctatttt
     5401 acaggaagca aggaacataa tgttgccgtg cgaaaacgtg cactgaaaaa aggactcacg
     5461 ctgagtgagt acgggctctt tactgtacga ggaaaaaagt tggttgcaag cactacagaa
     5521 gatgcagtgt acaaacgtct cggcatgcag tacattccgc cggagatgcg cgaggatcga
     5581 ggtgaaattg aacttgctct caagaaaaag attcctgcgc taatttcctg gaaggatatt
     5641 cgcggcgatt ttcaaacaca aacaaaatgg agcgacggtg ctgatagcat tgaagaaatg
     5701 gcagcgtacg cagaacgtct tggttggaaa tttttggtga tcacagatca tgtcgggggg
     5761 ataggaattg cgcgaccgct cgacgaaaaa cgtctggcaa agcaggcgaa agagattgat
     5821 gccatcaaca aaaaatcttc ggtgcacatt ttcaagggag ctgaaattga tatcaagaaa
     5881 aatggcgagc tagcactgtc aaagaaagcg tgtggtgcat tagacgtggt gcttgcctca
     5941 gtaca
//
LOCUS       DATDZU010000049         2582 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_759271, whole genome shotgun sequence.
ACCESSION   DATDZU010000049 DATDZU010000000
VERSION     DATDZU010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759271"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2263
                     /locus_tag="VJJ79_01525"
     CDS             <1..2263
                     /locus_tag="VJJ79_01525"
                     /inference="COORDINATES: protein motif:HMM:NF014565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004576 - oligosaccharyl transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="STT3 domain-containing protein"
                     /protein_id="HLC22432.1"
                     /translation="FFLLVQKIFDWKVALLASAFLTVIPAYLFRTMSGVSDKEAMAMI
                     FFYLALYSFFAFFLEKNLKKAVVFSVVAGLASGCLWWLWGGISFLLVTVGTFVFLLVL
                     LEKLSYRNLCLYTLYLFFTLLVLYTGFPARGDVSGLLTSMTSGIMFFALAFGWLHYVI
                     FTKNLLGLKAKITKIPHSFVTLSILLVFGVVAVTILYGYHFIPERILDVYIDMTEPFG
                     RNRWALTVAESRQPYFVDWIGQFTWKYLYLVFGGAVLLFYEGIKHLDLKLQSHALQSD
                     TVETVPKKRSFRSSVYTLTIAYAIFLIAFSMSRYSGSAAVFNGTSYYSILAYVGSLFV
                     FIAYLVYTMYSYYKVNPEGYQTFIAELSLSPLFLSIFLFFLIIGARSAMRLFFVFAPI
                     TAILAAYFVFTIFSYILKFKEKLVHYGAGITLAIFIILMLNGFVEGSIAEASATGMGY
                     NVQWQYAMDWVRENTPTDAVFAHWWDYGYYVQTGGERATVSDGGNAHPAINYFIGRHL
                     LTGQNDTEALQILAAKNVTHVLVVSDEIGKYSAFSSIGSDANYDRFSWIPAYSLDLGQ
                     TQELDEKINLVYVGGTALDDDFVYNDILFPANQAGIGGFIVPANKDASGVVSGFEQPT
                     AVIVYGTQFYNVPLRCLFVNGQELIFEQDGLEACLQIIPSIEGQTQNQLGGALYLSHD
                     VWNAWFTRYYLFGDISENFKQVYNDADSVPLMIYYGRLIGPLKIWEVSYPENLEIPEE
                     YYGTYIPEEVTLV"
     gene            2279..>2582
                     /locus_tag="VJJ79_01530"
     CDS             2279..>2582
                     /locus_tag="VJJ79_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22433.1"
                     /translation="MHIPMIVEEWNNNFLLFFQRNKNALIIFVLAFIAGVGYYIRTRN
                     LSLLIDATTGDYFPSDPDAIGILRYVQYIVEHGRLMDIDYLRFYPSGFGGTVGSLNE"
BASE COUNT          628 a          479 c          582 g          893 t
ORIGIN      
        1 cttttttctc cttgttcaga aaatctttga ctggaaagtt gcattgcttg cgtctgcgtt
       61 cctcactgtg attccagcct accttttcag aacgatgagt ggcgtctcag ataaggaagc
      121 gatggctatg attttctttt accttgcgct gtactctttc tttgcatttt tcttagaaaa
      181 aaacctgaag aaagccgttg tgttttctgt tgttgcaggt ctcgcgagtg gttgtctatg
      241 gtggctatgg ggtggcataa gttttcttct tgtgaccgtt ggaacatttg ttttccttct
      301 cgtactcctt gagaaactca gctaccgaaa cctttgttta tatacattgt acctgttttt
      361 taccctgctt gtcctgtata ccgggtttcc tgctcgtggg gatgtctcag gtctcttgac
      421 ttctatgact tcaggaataa tgttctttgc gttggcattt ggttggcttc attatgttat
      481 ttttaccaaa aatttgcttg gattgaaagc aaagattacc aagataccgc attcctttgt
      541 tactttgagt atacttttgg tttttggtgt ggttgctgtt actattctct atggctatca
      601 ttttatccca gagcggattc ttgatgtcta cattgatatg acagaaccgt ttggacgaaa
      661 ccgatgggcg ttgaccgttg cagagtcgcg ccagccatac tttgtcgatt ggattgggca
      721 gtttacctgg aaatatttat accttgtatt tggcggcgct gttcttttgt tctatgaagg
      781 cataaagcat ttagatctga aactacagtc ccacgcattg caatcagaca ctgtagaaac
      841 agtccccaaa aaaagaagtt tccgtagctc tgtgtatact cttactattg cttacgctat
      901 ttttcttatt gcctttagca tgagcaggta ctcaggttct gcggctgttt ttaatggaac
      961 gagttattat tctattctag cctatgttgg ttcattattt gtatttattg cctatcttgt
     1021 ctataccatg tactcgtact ataaagtaaa tcctgaagga taccaaacat ttattgcaga
     1081 gttgtccctt tctcctttgt ttctctccat attcctgttt ttccttatta ttggcgcacg
     1141 tagtgcgatg cgtttgttct ttgtctttgc tcccatcact gcaattcttg cggcgtactt
     1201 cgtttttacc attttctcct atatattgaa gttcaaagaa aagctcgtgc actatggagc
     1261 tggaattact ctcgcaattt ttattatttt gatgctaaac ggatttgtag aaggatcaat
     1321 tgcagaagcg agtgcgacag gaatggggta taatgtgcag tggcagtatg caatggactg
     1381 ggttcgcgag aatacgccga cggatgccgt gtttgcacat tggtgggact acgggtacta
     1441 tgttcagact gggggtgaac gcgcgacggt tagcgacgga ggaaatgcgc atcctgcgat
     1501 taactatttt ataggcaggc acctcttaac agggcaaaat gatacagaag cgttacagat
     1561 ccttgctgca aagaatgtta ctcacgtgct tgtcgtgagt gacgagattg gaaaatatag
     1621 cgcgttctct tcaattggtt ctgatgcaaa ctatgatcgc ttttcatgga tccctgcata
     1681 ctctttagac ttaggacaaa cacaggagct agatgaaaaa attaatttgg tatatgttgg
     1741 tggaactgcg ttagatgatg attttgtgta caatgatatt ttgtttccgg caaaccaggc
     1801 gggtataggg gggtttatcg ttcctgcaaa taaagacgca tctggggtcg tatctggatt
     1861 tgagcagcct acggcagtta tcgtgtatgg aacccaattt tataatgtcc cattgcgctg
     1921 tttgtttgtg aatggacaag aattaatatt tgagcaggat ggattagaag cctgtttgca
     1981 aattattccc tctattgaag gacagacaca aaatcagctc ggcggtgcac tctacctttc
     2041 tcatgatgtc tggaacgcgt ggtttacacg atactatctt ttcggcgaca tatcggaaaa
     2101 tttcaagcaa gtgtataacg acgctgattc agtcccgctt atgatttatt atggtcgtct
     2161 cattggacca ttaaaaatct gggaagtgtc atatccagaa aatttggaaa tacctgagga
     2221 atattacggg acgtatattc cggaagaagt gacgcttgtc tagcaatgga gtgatgaaat
     2281 gcatattcct atgatagttg aggaatggaa caataatttt ttgctgttct ttcaaaggaa
     2341 taaaaatgca ttaattattt ttgttcttgc gtttattgca ggggtaggat attatatccg
     2401 gacacggaat ttatctcttt taattgatgc aacgacaggg gattattttc cttctgatcc
     2461 tgatgctatt ggtatcctac gctatgttca atatattgtg gaacatggca ggcttatgga
     2521 cattgattat cttcgttttt atccctcagg atttggggga acagtcggga gtcttaatga
     2581 gt
//
LOCUS       DATDZU010000050         2877 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2230214, whole genome shotgun sequence.
ACCESSION   DATDZU010000050 DATDZU010000000
VERSION     DATDZU010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2230214"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1270
                     /locus_tag="VJJ79_01535"
     CDS             <1..1270
                     /locus_tag="VJJ79_01535"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HLC22434.1"
                     /translation="KDELNTLHGRIIIGILFVQDILVVLALTILMGTTTFTLVAIIPL
                     LLKVTGLIIFAYLLNRFVMPAVFRVAANSSELLFLVAVATCFFFALGAYMLGFSVAIG
                     GFIAGLTLASLPYNLNIIGHVSPLKDFFATIFFVSLGLQLTFVNFASVVKPLFIFLAL
                     VVLLKPFIVLLILSLLGYDKRNAFVSAVALAQISEFSLILVMSVGNVSQELFSLTILL
                     GIISIGLTVYILKYEMYVYSFFAPMLALFEKLSKKHRELDYEVPDHKKIILFGCSRMG
                     GTFLKSFQRVNKQALIIDFNPEVIDSLRKERVPCMYGDMGNKEILKRINFRHAKVVIS
                     TVASAEDNLRLLAYLKKVRSHATVFIAARTLDESLTLYDAGADYVLLPTIMSGYMMAN
                     MLQKYMGNKAGLQKLKRDHLKRLLEMKTNG"
     gene            complement(1496..1569)
                     /locus_tag="VJJ79_01540"
     tRNA            complement(1496..1569)
                     /locus_tag="VJJ79_01540"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1533..1535),aa:Met,seq:cat)
     gene            complement(1593..1997)
                     /locus_tag="VJJ79_01545"
     CDS             complement(1593..1997)
                     /locus_tag="VJJ79_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012819697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HLC22435.1"
                     /translation="MNDCLFCKIVKGEIPAENVYEDKNVVAFLDIHPRSIGHTLIVPK
                     KHYDLLTDMPEKELAAFAASLQNVARGFQKYAEGINILQNNGKAAGQLVSHVHFHLIP
                     RRNGDGIRLLQGEILKNVDLNKVQKDIQRIFK"
     gene            complement(1990..2178)
                     /locus_tag="VJJ79_01550"
     CDS             complement(1990..2178)
                     /locus_tag="VJJ79_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22436.1"
                     /translation="MTDAEKVFVMKFYVKEGKMATKISSENMTPQEILGLIEIAKQQI
                     LDGLKENKKEIFRGSKDE"
     gene            2252..2791
                     /locus_tag="VJJ79_01555"
     CDS             2252..2791
                     /locus_tag="VJJ79_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22437.1"
                     /translation="MSGYLRSIFSILLMLILCLSIVAAQDDETVQALQGAFEQKDETL
                     QSALEVDTEGLTEDQVVQVQKTLLIAQLDTVQVPELPKLFKKLFGDERVNIYLEGGDT
                     IAVVTEKGEVTELKEGTVENPTAEVTISDNVFKAANAGTFDFRKALKGGDITIKGMGI
                     WNKMRFGVYNAALHVASWF"
BASE COUNT          740 a          604 c          646 g          887 t
ORIGIN      
        1 caaggacgag ctcaataccc tccacggcag aataattatc ggtatccttt tcgtccagga
       61 cattcttgtc gttctcgcgc tgacgattct tatgggcacc accacgttta cgctggtagc
      121 gattattcct ctgttactaa aagtgacagg gctcatcatt tttgcctacc tgttgaaccg
      181 gttcgtgatg cctgcagtgt tccgtgttgc ggcaaactcc tctgagctgt tgttcttggt
      241 agcggttgcg acatgtttct tttttgccct gggcgcatac atgctcggct tttccgttgc
      301 catcggcggg tttatcgcag ggttaacgct tgccagtctg ccgtataact tgaacatcat
      361 tggacatgtc agcccattga aggatttttt tgccaccatc ttctttgttt ctctcggttt
      421 acaattaaca ttcgtaaact ttgcgtcggt agtgaaacca ttgtttattt ttcttgcatt
      481 agtcgttctc ttgaaaccat ttattgttct gctgatcctc agtcttcttg ggtatgacaa
      541 acgaaacgcg ttcgtttctg cggttgcgct tgcacagatc agcgaatttt cgttaatcct
      601 cgtcatgtcc gtaggcaatg tctcgcagga acttttttcg ttgacgatat tgctcggcat
      661 catcagcatc ggcttgaccg tgtatatctt gaaatacgaa atgtacgtgt actctttttt
      721 tgcaccgatg ctcgcgctgt ttgaaaagtt gtcgaagaag catagagagt tggactacga
      781 agttccagat cacaaaaaga ttattttgtt tggatgcagc cgcatgggcg gaacattcct
      841 gaaatcattt cagcgtgtga ataaacaagc gcttatcatc gacttcaatc cagaagttat
      901 tgacagttta cggaaagaga gagttccgtg tatgtacggt gacatgggca ataaagaaat
      961 cttgaaacgg attaacttcc ggcacgcaaa agtcgtgata tcgacggtcg caagcgcgga
     1021 agacaacctg cggcttctcg cctacttgaa gaaagtgaga agtcatgcaa cagtgtttat
     1081 agctgcacgg accctggacg aatcgttgac gttgtacgac gcaggagcag actatgttct
     1141 tttgccaacg attatgtctg ggtacatgat ggcaaatatg ctgcagaaat atatgggcaa
     1201 taaggcaggg ctgcaaaagc tcaagcgcga ccatttgaag cgtttgttgg aaatgaagac
     1261 aaatggataa tggtttttgc caactacttt gaatgtcctg tttatcctct gtacgttgtc
     1321 caacgtctca tgtactgtta attgagtttc tcatccaaga aattcctcaa ttcttgaagt
     1381 tctcttttgg taaatccaga gttcagtatc ttttgtacca gtactgttag cttaccgttt
     1441 gaatttgtta gttcatagtt caaatcattt tgtacttgca ttgaagacag agaaatggca
     1501 ctgggcggat ttgaaccgcc aaccccgagc tcatgagact cgtgttctac caggttaaac
     1561 tacagtgcca aataagggtt aagaaaaatc ggttatttaa aaatcctttg gatatctttt
     1621 tgtactttat ttaagtccac gttcttaaga atttcaccct gtaagagccg aataccatcg
     1681 ccatttcgcc gagggataag atggaagtgg acgtgggaaa caagttgccc cgctgctttc
     1741 ccgttattct gaagaatatt tattccctct gcatattttt gaaaacctcg tgcgacgttc
     1801 tgaagtgacg ccgcaaatgc agcaagttct ttttctggca tgtccgttag caaatcgtaa
     1861 tgtttttttg ggacaataag ggtgtgacca atactcctcg gatgaatgtc taaaaaagcg
     1921 acgacatttt tgtcttcata aacattctct gccgggatct cgcccttcac aatcttgcag
     1981 aagagacagt cattcatctt tgcttcctcg gaagatttcc ttcttatttt cttttagccc
     2041 gtcaaggatt tgttgctttg caatttcaat caagccaaga atttcttgtg gcgtcatgtt
     2101 ctcagagcta atcttggtcg ccatctttcc ttcctttacg tagaacttca tgacaaaaac
     2161 tttttctgca tccgtcattt tattggaaga agcgggcagt ctttttaaac attccccagt
     2221 ctatcgcaaa agtttttaaa ttccttagat attgagtggg tatctgcgaa gtatcttttc
     2281 aatactgctt atgcttattt tgtgcctttc catcgtcgca gcacaggatg atgaaacagt
     2341 acaagcattg caaggagcat ttgaacaaaa agatgaaacg ttgcagtctg cattagaagt
     2401 tgatacggaa gggttgactg aagaccaagt agttcaggta cagaagacct tgctaattgc
     2461 acagcttgat acggtacaag tgccggagct tccgaagctt ttcaagaaac tgtttgggga
     2521 cgagcgtgtc aacatctatc ttgagggcgg agatacgatt gccgtcgtca cagaaaaagg
     2581 agaagtgacg gaattaaaag aagggacagt agaaaatccg acggcagagg tcacgatttc
     2641 tgataatgtg tttaaggccg cgaacgctgg aacgtttgat ttcaggaaag cgttgaaggg
     2701 aggtgacatt accatcaaag gcatgggtat ctggaacaaa atgcgctttg gtgtctataa
     2761 tgctgccctg cacgtcgctt cctggttcta gcataaagct tataagaatc aattgcgttt
     2821 ctagtaaata tgccgtaccc agtgtacttc actcttgaag aggcacgtgc tgttctt
//
LOCUS       DATDZU010000051         5465 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2088188, whole genome shotgun sequence.
ACCESSION   DATDZU010000051 DATDZU010000000
VERSION     DATDZU010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5465
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2088188"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            417..806
                     /locus_tag="VJJ79_01560"
     CDS             417..806
                     /locus_tag="VJJ79_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018201943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22438.1"
                     /translation="MKKLLSPEWLLRIGVFGTFLGHGIFALQVKESWIPLLTTFGFSD
                     ATATTLLPFIGSMDIVVAFFALFWPLRIVLMWATFWGFATALIRPIAGQPIWEFVERT
                     ANWAAPFALLLIQGWPKKLKDLFTVKR"
     gene            929..1324
                     /locus_tag="VJJ79_01565"
     CDS             929..1324
                     /locus_tag="VJJ79_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22439.1"
                     /translation="MKTFIFLFIFFLLVPFVAAADSCDAFCTMKEYDYGSCRETWESG
                     FCAGNSEEDVYSFSQCTDFERCCCGYSGAVAAENDTIDTVAGEPVCQVAVPVAETLFW
                     FLLILVMLLALAYWMNGGNKEDVIVDQSF"
     gene            complement(1333..1554)
                     /locus_tag="VJJ79_01570"
     CDS             complement(1333..1554)
                     /locus_tag="VJJ79_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22440.1"
                     /translation="MVKVHGKTKRKFNSARHLPTARPETRERKRRPKTFASEAIAKKW
                     AEAHGVTNFYLQNLRIGTKGKKLKVVVRQ"
     gene            complement(1721..2203)
                     /locus_tag="VJJ79_01575"
     CDS             complement(1721..2203)
                     /locus_tag="VJJ79_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22441.1"
                     /translation="MDLYCTPQVYSFLWEQWDPRGAKSGILLAGNGADLNWYATTAVA
                     GKEFFSVTNTNDVSNLFLRDHLEQQKRNQKVIPWYQGSLEDAVKDYQEPFHEVMLVRP
                     SEKKSSIMQYYVYEEGLWVPGTAYMTEKVDILAEKNIAELMDFWRRIKSATKKENETN
                     "
     gene            2302..2679
                     /locus_tag="VJJ79_01580"
     CDS             2302..2679
                     /locus_tag="VJJ79_01580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22442.1"
                     /translation="MKPLMKLVQTGALLSLIEGCSNDNFVTQVKLEPQYPTSQDDLDC
                     VVYEKRDIGGNVGFTVQESFETYDFHWLVNNTYLFHEEGHGWNRLEYENFTSGDEVLC
                     SAWTSESSSDDAYEVGSAWVYIP"
     gene            2760..3944
                     /locus_tag="VJJ79_01585"
     CDS             2760..3944
                     /locus_tag="VJJ79_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22443.1"
                     /translation="MNRFLDPPGERIALVFRVSGIVLILTLLLLTTFPFVYADSDNYD
                     IARVYVNGMRADTNKVQVELGSTLQVAVFIEGTGTATVRAKAWIGGYEYGVIEDTTDI
                     FNVQESVTYKKNLYLDIPDDFDAEGKDYALHIQVYDAQELEEKAYNVYIEPERHNVVV
                     KDIILSSRTVSPGDYLAMNVRLENQGEKDEDDIRVTISVQDLDISHSVYADALLSGEQ
                     ESTGTVYVLIPADARAGTYDVDVLITYNNEYTEVTGSTTFNIEGNARGYDTSALVSIE
                     KIKSLVVGEENGLTVQVTNLGDTLKTFTVNVVAIGTSSTEDLAVAPLSTSSFTFYVVP
                     ADAGNENILVTVSSDDGLVTQEILKVTVEEAQSPYPFVVSVILAVLVLLGIVFCLRSF
                     HT"
     gene            3978..4793
                     /locus_tag="VJJ79_01590"
     CDS             3978..4793
                     /locus_tag="VJJ79_01590"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HLC22444.1"
                     /translation="MAKRVESPSSINTFLQCKRKYYYQYIEKHSVPSTIHTLRGQIVH
                     AVLDKFYSVSIISFTNATYPQQLRVELQDIFIKEWGAQREALLKLHLPREKLITIFDE
                     TLLMLFNWYEHFLCELKVKVQKTGDVQLAFAALIPQREIELTSASYSVHGFADAIYSV
                     NDAVHILDYKTNAQTEIKDSILLQLAIYSLIYEEMYGKRPDKVGAFFLRDTVKMLDVD
                     EHLITLAKQEIKKIHEHTSTAEHIDAYPRTVTPLCKWRDGQCAFYDFCKPHAH"
     gene            complement(4790..>5465)
                     /locus_tag="VJJ79_01595"
     CDS             complement(4790..>5465)
                     /locus_tag="VJJ79_01595"
                     /inference="COORDINATES: protein motif:HMM:NF018798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HLC22445.1"
                     /translation="GETMISGLKALNYSSDIAMQKDGEEESSFLSLFCTMLLSIAVAL
                     LVFKLLPLGITQLVANANALFENRFIFNLSEGVIKIGILIGYVYAISFIPDIRRVFQY
                     HGAEHMVVNAHEHNDLDNVRKYSTVHVRCGTSFILFVLGISILVYVFLPTEISFVSKY
                     GLRILLLPLIAGIAYELIRISPKYEKNILFQIFISPGLLVQKITTKEPDEAQIEVAKA
                     ALKAAL"
BASE COUNT         1495 a         1044 c         1125 g         1801 t
ORIGIN      
        1 cttggagttt ataaaccagt gtattttatt ccttactcaa agagtagaga gaatgtagtt
       61 gagaacttct cgtactgcag gaatataggt gatttctccg agcttttcta agggaataaa
      121 gcgaaatctt caaggatatc tggttcctta aaaactgttt ttgtccttcc tggttttttg
      181 cacgaaatag tgcctaggaa gtctttttct catgttcttc aaattcaata tttgtcaggt
      241 gtgattcttt ctttagatcg caaccaagtt cttcttttcc ttcctggatt gctgtttgtt
      301 ctgcagactc tttcagttct atggttccac cggaaagttc atatctttgt ttattgggtt
      361 ttgctgcacg gcacttttgg aaaactattt aaaatatctt gggtataata ttatctatga
      421 aaaaattatt atctccagaa tggcttttac gcatcggagt ctttggcact tttcttggtc
      481 atggtatttt tgcgttgcag gtgaaagaaa gctggatacc gcttctcact acgtttggtt
      541 tttctgatgc gacagcgacc accctacttc cttttattgg tagtatggat atcgtcgtcg
      601 ctttcttcgc attgttctgg ccattgagaa ttgttttaat gtgggccaca ttctggggat
      661 ttgcaacggc actcattcgt cctatcgcag ggcagccgat ttgggagttt gtcgaacgca
      721 ctgcaaattg ggcggctcct tttgctttgt tactcataca agggtggcca aagaaactaa
      781 aagacctttt tactgtgaaa cgttagtctt cttttcaaga acttgctgaa atggatgccg
      841 tagcagtatc tgttacaaaa acacatcttc aattctacta taaaagaata ataatccata
      901 taaataacaa tacacaggaa ataaatatat gaaaacgttt atcttcctct ttatcttttt
      961 tcttctagtt ccgtttgttg ccgcagcgga ctcctgcgat gcattctgta ctatgaaaga
     1021 gtatgactac ggctcgtgtc gagaaacatg ggagtctggg ttctgtgctg ggaatagtga
     1081 agaggatgtc tatagctttt ctcagtgtac agattttgaa cgatgttgtt gcggatactc
     1141 tggtgctgtt gctgcagaga atgatacaat agatacggtg gcaggagagc ctgtttgcca
     1201 ggtagctgtt cctgttgcag aaacgttatt ttggtttctg ttaatccttg ttatgctgtt
     1261 agcgttggcg tactggatga atggaggaaa taaagaagat gttattgttg atcagagttt
     1321 ttgaaaagaa ttttattgac gaactactac tttaagtttt tttccttttg ttccaattct
     1381 gagattttga aggtagaaat ttgtcacgcc atgcgcttct gcccatttct ttgctatcgc
     1441 ttcacttgca aaggtttttg ggcgtcgttt tctctctctt gtttctggtc gagcagtagg
     1501 aagatgtcta gcactgttaa acttacgttt tgtttttccg tgaaccttta ccatcgcatc
     1561 attttaatac tgtctcttta tatgtttttg ctttttaaat aagtgatagt taccatttta
     1621 atagtaatta aataggattg actttactga catccaacat aaaagttatt tttaagctgt
     1681 ataaacacaa tgggttttaa gagattagct ataacagtgc ttagtttgtc tcattctctt
     1741 tttttgttgc gctttttatt cttctccaga agtccattag ttccgcaata tttttctctg
     1801 caagtatgtc cactttttct gtcatatagg cagtgcctgg aacccagagc ccttcttcat
     1861 acacataata ttgcataatg gaagattttt tctctgatgg tctaacgagc attacctcat
     1921 gaaatggctc ctggtagtcc ttcactgcgt cttcaagaga tccttgatac caaggaatta
     1981 ctttttggtt tcttttttgt tgttctaaat ggtcgcgaag gaatagattt gaaacgtcgt
     2041 ttgtattagt cacagaaaag aattcttttc ccgcaacagc tgttgttgca taccagttta
     2101 aatcggcgcc gttccctgca agaaggatgc ctgactttgc tccacgtgga tcccattgct
     2161 cccagagaaa gctatacacc tgcggcgtac aatacaaatc cattacttaa aaataatgct
     2221 attgttctta aaaaagactt ctgtacagta tatacagtat aaggattagt tttatctcta
     2281 tctccattta tttttacttt catgaaaccg ctcatgaaat tagtacagac cggcgcactg
     2341 ctctcgctta tcgagggctg ttctaacgac aatttcgtga cccaagtgaa gctcgagcca
     2401 caatatccta cttcacagga tgacttggat tgtgttgtct atgagaaacg tgatattggc
     2461 ggaaatgttg ggttcactgt tcaagaaagt tttgaaacct acgatttcca ttggctcgtg
     2521 aacaatacgt atctctttca tgaagaaggt catgggtgga atcgtctcga gtacgagaac
     2581 tttaccagtg gggatgaagt tttgtgctcc gcatggactt cagaaagctc atcggacgat
     2641 gcatatgaag taggcagtgc gtgggtttat ataccctaat tttttatatt ttttaagtcg
     2701 gcgcaacgta tataaaccca tttttctccc ctttaggtat actttgtgat gaaaaactaa
     2761 tgaacagatt tttagatcca cctggtgaac gcatcgcgtt agtttttaga gttagtggta
     2821 ttgttctcat tttaacactt ttgcttctta cgacatttcc ttttgtttat gcagattctg
     2881 ataactatga cattgctcgc gtctatgtta atggtatgcg tgcagatacg aacaaagttc
     2941 aggttgagct cggtagcaca ctgcaagttg ctgtttttat agaaggtact ggtactgcta
     3001 ctgtccgcgc aaaagcatgg attggtggtt atgagtatgg tgtaattgaa gataccacgg
     3061 atatttttaa tgttcaagaa agtgttacat acaaaaaaaa tctgtacctc gatattcctg
     3121 atgacttcga tgcagaagga aaggactacg cgcttcacat ccaagtgtat gatgcgcagg
     3181 aattagaaga aaaagcgtat aatgtttata tcgagcctga gcgacataat gttgttgtca
     3241 aagatatcat tctttcctct cgtactgttt ctcctggtga ttatcttgcc atgaacgtac
     3301 gcttagagaa tcagggagaa aaagatgagg acgatatccg tgttacaatt tctgttcagg
     3361 atcttgatat ctctcatagc gtctatgccg atgcattgct ctctggtgag caagaaagta
     3421 ctggcacggt atatgtacta attccagcag acgcacgcgc aggaacttac gatgttgatg
     3481 ttcttattac ctataataat gagtatactg aagttaccgg aagcaccaca tttaatatag
     3541 aaggaaacgc acgtggttat gatactagtg cgctagtttc tatagaaaaa attaagagcc
     3601 tcgtcgttgg cgaagaaaat gggttaaccg tgcaggtgac gaatcttggc gacacactaa
     3661 aaacgtttac cgtgaacgtt gttgccattg gtacatcatc taccgaagat cttgctgttg
     3721 caccattgtc gactagctct ttcacttttt atgttgttcc agcagatgca gggaatgaga
     3781 atattcttgt tactgtctcc tctgatgatg ggcttgtcac acaagaaata ttaaaagtta
     3841 ctgttgagga agcacaaagt ccatatcctt tcgttgtttc agttatcctt gctgttcttg
     3901 tcttgttagg gattgttttt tgtcttcgat ccttccacac ataaaacttt ttaaatatta
     3961 agaagcagtt tttgggtatg gcaaaaaggg ttgagtcgcc ttcttcaatc aatacgttcc
     4021 tgcaatgcaa acggaagtat tattaccagt acatagaaaa acattcggtt ccatccacaa
     4081 tacatacgtt acgtgggcaa attgtgcatg ccgtactaga taaattttat tccgtctcta
     4141 ttatttcgtt tacaaatgca acatatccgc agcagttgcg cgttgagctt caagatattt
     4201 ttattaagga atggggagca cagcgagagg cattgcttaa attacatctt ccccgcgaaa
     4261 agcttattac aatatttgat gaaacgctcc taatgctttt caattggtat gaacattttc
     4321 tatgtgagct caaagtaaaa gtgcagaaaa ctggtgatgt acaactagcg tttgctgcgc
     4381 taattcctca gagggaaatt gagcttactt cagcatcgta cagtgttcat gggtttgcag
     4441 atgcgatcta ttccgtgaac gatgctgtgc atattctcga ttataaaacc aatgcgcaga
     4501 cagaaatcaa ggacagcatt cttcttcaat tagcgatata tagccttatc tatgaagaaa
     4561 tgtatggaaa gcgacctgat aaagttggcg cttttttcct tcgtgataca gtgaaaatgc
     4621 ttgatgttga tgagcacctt attacgctag caaagcaaga gataaaaaaa atccatgagc
     4681 ataccagtac ggcagaacat atcgacgcat atccgagaac tgttaccccc ctctgtaaat
     4741 ggagggatgg gcagtgcgcg ttttatgact tctgcaaacc gcatgcgcac tagagtgctg
     4801 ccttgagcgc agcctttgct acttctattt gtgcctcatc aggttccttt gtcgtgattt
     4861 tctgcactaa aagacccgga gaaataaata tttggaacaa aatatttttt tcgtactttg
     4921 gacttatgcg gattaattca tatgcgattc cagcaatcaa tggaagcaac aaaatgcgaa
     4981 gaccatactt agatacaaaa ctaatctctg ttggcaggaa tacgtagact aaaatgctga
     5041 tccctaacac aaacagaata aagcttgttc cgcaacggac atggacagtt gaatattttc
     5101 tcacattatc taggtcgttg tgctcatgtg cgttgacgac catatgctct gcaccatggt
     5161 actggaacac gcgacggata tctggaatga atgagatagc atagacatac ccgatgagaa
     5221 ttccaatctt aatgacgcct tcgctgagat taaatatgaa tctgttctcg aacaatgcgt
     5281 ttgcgtttgc aacgagctgc gtgattccca atggaagaag cttgaacacc aataatgcta
     5341 cggctatcga aagaagcata gtgcaaaaca gagaaagaaa gctcgactct tcttctccat
     5401 ccttttgcat tgcaatatct gaagagtagt ttaatgcctt tagaccagaa atcatagtct
     5461 ctcct
//
LOCUS       DATDZU010000052        10338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_810468, whole genome shotgun sequence.
ACCESSION   DATDZU010000052 DATDZU010000000
VERSION     DATDZU010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 10338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10338
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810468"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1308)
                     /locus_tag="VJJ79_01600"
     CDS             complement(<1..1308)
                     /locus_tag="VJJ79_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22446.1"
                     /translation="MEKKEGQFLRLKAIFMISVLIVALFSVSNLELVSAAEDNSVCCE
                     MTSSGESCLYTSEDNCESPESPAASTCEQTSYCATGVCVSDIGQCSDGVARATCESND
                     GYSWYDAASAELLQCQKECCVVAGGAQCSYTTETNCENLVQGLEGVSYEFQDVGSEAE
                     CTDLCTVADKGCCVSEDSCMYTTQADCSDSTVDISAGTGFYSGTYCSDLKLDCPCDAH
                     SYKQCDGEDVYWFDSCGNQEEVVQAGDEDAEGNKVSEPGNCDYLDEGTLCGYSETDED
                     YVCRSVDCTETFDGEYFDGNRDQHDSKIGEPRSNGESWCLYESPAGGWFDRPGSQHYR
                     ALCINGEEQLEACGDRREKVCLQYPYTIGFSSTILNETDEWDASESGAYDLFPEAGSK
                     CMDNGEYLESLINANVTTVPPGDSDSCDTRNLVCEVVFGKTTAT"
     gene            1386..1991
                     /locus_tag="VJJ79_01605"
     CDS             1386..1991
                     /locus_tag="VJJ79_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22447.1"
                     /translation="MKEWQHKLEVLTDHLVLPAVIVLFFIIVAELFFVEFAEQYHLWL
                     TIADYTIMTIFIGDLIFKYFRVRNIPKFIRTSWLDIIAVFPFFLFFRVFETLLIFTEL
                     QKEVRNVQLILHESVEISKGTSEIIKEAEAAGKISRVKTILHMFRSLENSPRLVKAVA
                     FYERPSGKKQVKKIEQEIVNIEKDVMGVPKRVIRKISRKKK"
     gene            2023..2406
                     /locus_tag="VJJ79_01610"
     CDS             2023..2406
                     /locus_tag="VJJ79_01610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22448.1"
                     /translation="MRWFILAWVMLLSFSLVSAECFDSDGGKNKYDFGGVTDNGNTYQ
                     DECEGTDIKEYFCGVDGVASYTILPCVNDCTEGECEVTSQAPVQAAPEQEGINIQWYL
                     YGAAVMIILFLYIYWFKWRPRRKRF"
     gene            complement(2464..3204)
                     /gene="pcn"
                     /locus_tag="VJJ79_01615"
     CDS             complement(2464..3204)
                     /gene="pcn"
                     /locus_tag="VJJ79_01615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030337 - DNA polymerase processivity
                     factor activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proliferating cell nuclear antigen (pcna)"
                     /protein_id="HLC22449.1"
                     /translation="MYLVLAEPRLLKESVNVIADLVTEVTIKVDKDKIAIVAIDPSLV
                     AMVDFKLLSSAFVEYQVAKPEELAINLDHLRQVLKRAKPIDTVTLSLDGERLQVLLKG
                     EHTRAFTIPLITIEENEQMIPKLSFTTSVTLPSEKFDEVIEDMGVIAESLTFQRNALA
                     FVVKSTANLKEAKVEIPLTADMGIAMDGEDHASKYSIEYLKKISKASKLADQVTLEFG
                     TDYPLHVEYTLLDKLRLSFILAPRVSTD"
     gene            complement(3292..3699)
                     /locus_tag="VJJ79_01620"
     CDS             complement(3292..3699)
                     /locus_tag="VJJ79_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22450.1"
                     /translation="MLRGTKEVIQEKTFRGFQFLFGVAVLIYSILILVSDLQGKTFSF
                     SSPFVLEILVLLLGLFFIQDGLFARKKHLVSFLVGFFLSLLGLFPILVDAGLLDFLPV
                     HVELIVSPLLLGLLLFFSSAYFLVDRCSHMFEK"
     gene            complement(3692..3979)
                     /locus_tag="VJJ79_01625"
     CDS             complement(3692..3979)
                     /locus_tag="VJJ79_01625"
                     /inference="COORDINATES: protein motif:HMM:TIGR01384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor S"
                     /protein_id="HLC22451.1"
                     /translation="MTPKAEGKKTLLICTCGYSHQEKEEILMRENLRVNKKVEIAEDV
                     AQKSMPKVNVECPKCSHKEAFFWTQQTRASDEPETQFFQCVKCEHRWRNYA"
     gene            complement(3993..4577)
                     /locus_tag="VJJ79_01630"
     CDS             complement(3993..4577)
                     /locus_tag="VJJ79_01630"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLC22452.1"
                     /translation="MRWKTSAKKVYHFIFVEDSFLSWVVNFALAFLFVKFVLFPVLAL
                     ALGTQLPLVAVISGSMEHEGMAFDQWWDTRGEWYLDKNISNQTFRSYSFFNGFDKGDV
                     MVLINGENLVVGDVLVYSTSSYPYPIIHRVVAISEEGYEVKGDHNSDSDPVIVSRDKV
                     VGKALYRIPKLGWVKIWAVAIWEQFKGGTNALLS"
     gene            4674..5159
                     /locus_tag="VJJ79_01635"
     CDS             4674..5159
                     /locus_tag="VJJ79_01635"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HLC22453.1"
                     /translation="MGQEEVRRIKAIFADLKIEPTYLVHEAVITSEEAARTRGFALKQ
                     GIKAILFTNDTKEWVVVDVPADKKVDTKKVAEQLGWSKGKIRMATPEEVLEKTNCEVG
                     AVPPFGHKETLPILVDTRVYENQESAFNIGLRTHSVKVKTIWMKDVFETVNAREGTFS
                     K"
     gene            5238..6440
                     /locus_tag="VJJ79_01640"
     CDS             5238..6440
                     /locus_tag="VJJ79_01640"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLC22454.1"
                     /translation="MNTKGIKLQPDFEKAILDLGFSEFTEIQEKCIPIIQDGKDVIGL
                     SFTGSGKTAAFGFPALEKVTLGKGLQLLVIVPTRELCNQVAKEFRKFAKYRKTFIVEV
                     YGGVSIIPQIDHLRHADVVVGTPGRLLDHLSRGTINLGHIKILVLDEADKMFEMGFIE
                     DILKIMSRIPKNGQKLFFGATMPSAIMDIAKRYMNNPEKVKMQSYVDRSKLIQHYYNV
                     NRGNKFSLLSHILKKDGHNGLTIVFCGTRHGVDMITRNLNQQGIKAHALHGGMTQNRR
                     KQVMDMFHGKKLDVLVASDVAGRGIDVKNVMLIVNYDLPKTSEDYVHRIGRTARAGCD
                     GKVISLLSSEDHDNFRRILEDRSLLIHKMDTPEFERVEFIRPQQQHQRPFQRRFSGHG
                     NSGQRRFR"
     gene            complement(6449..6724)
                     /locus_tag="VJJ79_01645"
     CDS             complement(6449..6724)
                     /locus_tag="VJJ79_01645"
                     /inference="COORDINATES: protein motif:HMM:NF025040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit L"
                     /protein_id="HLC22455.1"
                     /translation="MEVNVLEHDKNRLKFELVGETHTFANLITKELWKDPSVVVSGYN
                     QKHPQTEKVTVFLETEKKDAKKVLLDTIESLKKDATEFKTKFKKALK"
     gene            complement(6782..7057)
                     /locus_tag="VJJ79_01650"
     CDS             complement(6782..7057)
                     /locus_tag="VJJ79_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22456.1"
                     /translation="MAQKSIEELLKDFTKEYMKQEPYCSYVNFIGISDAGLIERMRNK
                     KIKMSNISGERCFYVSLREDLPVGLEIPNTYHGVKVYTRVVGDIRAL"
     gene            complement(7113..7466)
                     /locus_tag="VJJ79_01655"
     CDS             complement(7113..7466)
                     /locus_tag="VJJ79_01655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22457.1"
                     /translation="MTAEHIGQLFEEFTYRYQWNEPYCHFVDSVTILDEDLEKWIREQ
                     EEESSPAFLQGILQTLHDSVVGNLENGVAVSSKLYFYVTLRAPLPVWLKIPETYKGIN
                     VQTQVTGEIVSLKFH"
     gene            7588..8658
                     /locus_tag="VJJ79_01660"
     CDS             7588..8658
                     /locus_tag="VJJ79_01660"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22458.1"
                     /translation="MEIAKPIRMARMVNFFRGHTYAIPRIIDNYFRRYVLRQQSLRYL
                     EVALNYNCNADCFFCSCSRTKFRERDDVQGKSFTLEEIESVVVSAKKCNTIMIGIAGG
                     EPFLSPLLEESVRIIRKHKILPLVVTNGILASKERLVRLKEAGLCVFCVSLHAHGKQH
                     DEIVGVPGAYEKALNALFIAKEIGLAPQGCLTPTHESIKSGEFERLVNLLTKEKIPMT
                     LDYPAPSGKTQGDLDLMLTSSEIKYVRNLCATNPYVSLDLQNNYDGYSCPAGDVCAYV
                     TAYGEVLPCPFIQISYGNLRQEPLDKIYARMSSAPVFKKHAQYCLAGESKKFVKDYLF
                     PIGEKPPLKVNDHPLRDEGLLE"
     gene            8668..9423
                     /locus_tag="VJJ79_01665"
     CDS             8668..9423
                     /locus_tag="VJJ79_01665"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLC22459.1"
                     /translation="MEKNIQTWNQQAAEGGYHYRLDPVEKAVDDHLNDLLQKIFPYEE
                     FKGKKVLDVGCGTGDFSLILILHASEVVGIDPAEASIILAKTKMPLGNIKFIVSSAYE
                     MPFPDDSFDIVVCRNMLHHLDEPEKAIKECSRLAKTIVIIESNGINPYRQIMKRVSKV
                     YKERGEGAILVSQLKKMLNNNGFRVQRQKYGTFIPPAAPRWSLGFLTWIEKIVEKTPL
                     IKFFGGTYIAIAQKRHCLQFVQSHTDLYLYNML"
     gene            complement(9323..10300)
                     /locus_tag="VJJ79_01670"
     CDS             complement(9323..10300)
                     /locus_tag="VJJ79_01670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLC22460.1"
                     /translation="MYISVVVPVLNEEENISLLTIIIKETLEKLTPEYEILFIDDGST
                     DGTFSRLLTLAKLDPKVKVIRFTRNFGQSAAMNAGFKHATGDIIVTMDGDLQNDPFDI
                     PRMIDVLNRGYDVVCGWRYNRRDPSLRKILPSLLAGFVRKVIAKDTIHDSGCTLKVYK
                     SKAVKNLKLLGETHRFIPLMLQWQGFKVVEVKVRHHIRKHGQTKYGVKRLWRGFFDLI
                     GLLFWEKYATKPLHMFGAIGLISILLSFLVLLFVFLMAIIKEIPLLVGPLLLFSVVLF
                     LGGLQIFLIGVIAEMQTKAYYTNKDPYEIEQIVSSAASVQSRYKSRRKI"
BASE COUNT         3247 a         2210 c         2015 g         2866 t
ORIGIN      
        1 cgtggcagtc gtcttcccaa aaacaacttc acatacaaga tttctcgtat cacaggaatc
       61 gctgtcacca ggaggaacag tcgtcacatt cgcattaatt aaactttcta gatactcacc
      121 attgtccatg cattttgaac ctgcttcagg aaaaaggtcg tacgctccgg attcagaagc
      181 atcccattca tccgtctcat tcaaaatggt cgaggaaaaa ccaatggtgt acggatactg
      241 cagacaaact ttttcccgtc gatctccgca cgcttctaac tgttcttccc cattgataca
      301 tagtgcacgg taatgttgcg atcctggtct atcaaaccat ccgcctgcgg gcgattcata
      361 caagcaccac gattccccat ttgagcgtgg ttctccaatc ttgctgtcat gctgatcccg
      421 attcccatcg aaatattccc cgtcaaacgt ctccgtgcag tcaacgctcc tgcacacata
      481 atcttcatca gtttcactat acccgcacag cgttccttcg tcaagatagt cacagttccc
      541 aggctcgctc actttattcc cttctgcatc ttcatctccc gcctgaacaa cttcttcttg
      601 attgccgcat gagtcaaacc agtacacatc ttctccgtca cattgcttgt acgaatgtgc
      661 gtcacacgga caatccagtt tcaagtcaga acaatacgtt ccggaataaa aacccgtgcc
      721 agcagaaatg tcaaccgtag agtcggaaca atctgcttgc gtcgtgtaca tacagctgtc
      781 ttcgcttacg cagcatcctt tgtctgcaac agtacagaga tccgtgcact ctgcctcaga
      841 gccaacatct tgaaactcgt atgaaacacc ttcaaggccc tgcacgagat tttcgcagtt
      901 tgtttccgtt gtatacgaac actgcgcacc gccggcaaca acgcaacatt ctttctggca
      961 ctggagaagt tcagcacttg ccgcatcata ccaagaatat ccatcattac tttcacacgt
     1021 tgcacgcgca accccatcag aacactgtcc tatatcagaa acacacacgc ctgtcgcaca
     1081 gtacgaagtt tgctcgcacg tcgacgccgc aggagattct gggctttcac agttgtcttc
     1141 agacgtataa aggcaggact caccgctcga cgtcatttca cagcacacag aattgtcttc
     1201 agccgcgcta acaagttcga ggttagacac gctgaacagc gcaacaataa gaacagaaat
     1261 cataaagata gctttcaacc taagaaattg tccctctttt ttctccatat gagctacacc
     1321 aatgccttga gacttttaaa tattgtggta atattaataa atcgcctcgt ctattaacaa
     1381 aagatatgaa agaatggcaa cataagcttg aagtactaac ggatcacttg gttctccctg
     1441 cagtcatcgt tctttttttc atcatcgtcg cagaactttt cttcgttgaa ttcgcagaac
     1501 agtatcatct ctggctcacc attgcagatt acactatcat gacgattttc attggagact
     1561 taatcttcaa gtacttccgc gtcagaaaca ttccaaagtt tatccgcacg tcgtggttag
     1621 acatcatcgc tgtgtttcct ttcttccttt tctttcgcgt ctttgaaacg ctgcttattt
     1681 ttacagaact ccaaaaagaa gtcagaaacg tgcaactaat attgcatgaa agcgttgaaa
     1741 tttccaaagg cacctcagaa attatcaagg aagcagaagc tgcgggaaag attagccgcg
     1801 tcaaaacaat tttgcacatg ttccgttctc tcgagaacag cccccgctta gttaaagcag
     1861 ttgcattcta cgagagacca tcaggaaaaa aacaagttaa aaaaattgaa caagagatag
     1921 taaatataga aaaagatgtc atgggtgtcc caaaaagagt catcagaaaa atttcaagga
     1981 aaaagaaata aatttatata gtttgagcgt ctttttttgt atatgcgctg gtttatcctt
     2041 gcgtgggtca tgctcctttc tttcagtttg gtaagtgctg aatgctttga ttctgacggg
     2101 ggaaaaaata aatatgattt tggcggggtc acagataatg gcaacaccta ccaagatgaa
     2161 tgtgaaggta cagatatcaa agaatatttc tgtggagtag atggtgttgc atcctatact
     2221 attcttccgt gtgtcaacga ttgtactgaa ggcgagtgcg aagtgacaag ccaagcaccc
     2281 gtacaagcag cccctgaaca agaagggata aacattcaat ggtatttgta tggcgcagcc
     2341 gttatgatta ttctcttcct ctacatatat tggtttaagt ggcgaccacg aagaaaacga
     2401 ttttaaaata cgggaatttt tttttcttga tataggcgtt tcatatcaga attttagata
     2461 acactaatcc gtacttacgc gcggcgcgag aataaaactc aagcgcagtt tatcgagcag
     2521 agtatactcg acatgtaacg gatagtcagt accaaactcc aatgtcactt ggtctgcaag
     2581 tttgcttgcc ttcgagattt tttttaagta ctcgatagaa tattttgacg catgatcttc
     2641 gccatccatg gcaataccca tgtccgcagt caatggtatt tctacttttg cttctttcaa
     2701 gttcgcagtc gacttcacga caaacgctag tgcattacgc tgaaaagtca agctttccgc
     2761 aatgaccccc atgtcttcaa tgacttcatc aaacttttca gaaggcaatg taacactcgt
     2821 agtaaaagaa agcttgggaa tcatttgttc attttcttcg atagtaatga ggggaatggt
     2881 aaatgctctc gtatgttcgc ctttcaggag cacctgcaat cgttctccgt ctaaagataa
     2941 tgtgacagta tcaataggct ttgcccgctt cagtacttgg cgcaaatgat cgagattaat
     3001 tgccaattct tccggctttg caacttgata ctccacaaac gcagaagaga gcagcttgaa
     3061 gtccaccatg gcaaccagag aaggatcaat cgcaacaatc gctatcttat ctttatctac
     3121 ttttatggta acttccgtga caaggtctgc aatcacatta acgctttctt tcaaaagtct
     3181 tggttctgcg aggacgagat acattccctc tgggacgaac cgttcatttt tatactttgt
     3241 tatgcttgag aatagggtat ccattataca atagaacaca ctgagtagtt actatttttc
     3301 aaacatatgt gagcaccggt caactaaaaa gtacgcgctc gagaaaaaca gcagaagacc
     3361 cagaagaagc gggcttacaa tgagctccac atgtacaggc aaaaaatcca aaagacctgc
     3421 atcgacaaga atcggaaata gtcctaaaag cgaaagaaaa aaacccacca agaaagaaac
     3481 taaatgcttt tttctagcaa acaacccgtc ttggataaaa aagagtccca gtagcagcac
     3541 caggatttct agaacaaatg gagaagaaaa cgaaaacgtt tttccctgca ggtcgctgac
     3601 aagaataagg atgctataaa tcagcacggc aacgccgaag agaaactgaa atcccctaaa
     3661 cgttttttct tggatcacct cttttgttcc cctaagcata atttctccac ctatgttcac
     3721 atttcacgca ctggaagaac tgagtttctg gctcatcact tgcccgtgtt tgttgcgtcc
     3781 agaagaacgc ttctttatgg ctacacttcg ggcactcgac attgaccttg ggcattgatt
     3841 tttgtgcaac atcttcagca atctctacct ttttattgac gcgcaagttt tcccgcatca
     3901 agatttcctc cttttcttgg tgcgaatagc cacacgtaca aataagtaat gtttttttcc
     3961 cttcagcttt cggggtcatg atacttccac attcaggaca aaagagcatt ggttcctcct
     4021 ttgaactgct cccagatggc aacagcccaa attttcaccc accctaactt cgggattcta
     4081 tataaagctt tacctactac cttatctcga gaaactatca caggatctga atctgaatta
     4141 tggtcgcctt tgacttcata gccttcctcg gatatcgcga caacacggtg aataatcgga
     4201 tatgggtacg acgatgtaga atagacaagc acgtcaccaa cgacaaggtt ttccccatta
     4261 attaaaacca tcacatctcc cttatcaaac ccattgaaaa acgaataaga acgaaatgtt
     4321 tgattgctga tattcttatc aaggtaccat tccccacgcg tgtcccacca ttggtcaaat
     4381 gccatccctt catgctccat gcttccggag attaccgcaa cgagaggcag ctgcgttccc
     4441 aatgcaagag ccagtactgg aaaaagaaca aatttcacaa atagaaacgc aagagcaaag
     4501 ttcaccaccc atgaaaggaa cgagtcctca acaaaaataa aatggtacac tttttttgcg
     4561 gaggttttcc agcgcattat tcgacgaaaa agggaggaat atttaaatag ctatctattt
     4621 tgaagagaac cgaataagaa atgtatttaa agaatctgaa aaatttcttc ggcatgggtc
     4681 aagaagaagt gcgtcggata aaagcaattt ttgcagatct caaaatagaa ccgacgtatc
     4741 tggtacatga agcagttatt accagcgaag aggcagcaag aacaagaggc ttcgcattaa
     4801 aacaaggaat caaagcaatc ttgtttacga atgatactaa ggaatgggtt gttgtcgatg
     4861 tccctgcaga taaaaaagta gatacaaaaa aagttgcgga acaactaggt tggtcaaaag
     4921 gaaaaataag aatggcaacg ccagaggaag tcttagaaaa aacaaattgt gaagttggtg
     4981 cagttccacc ttttggtcac aaagaaacac tgccgatttt agtcgatact agagtatacg
     5041 aaaatcaaga aagtgccttt aacattggcc tcagaacaca ttctgtaaaa gttaaaacta
     5101 tatggatgaa ggatgtgttc gagaccgtga acgcaagaga aggaacattc tcaaaataac
     5161 taatttttct taaaaaaaac gaataattta aaagcaaacc tttaaaaggc accgtttttc
     5221 ttaaatacta tataaaaatg aataccaaag gaattaaact acaacctgac tttgagaaag
     5281 cgatattaga cctaggtttc tcggaattta cggaaatcca ggaaaaatgc atcccaataa
     5341 tccaggatgg aaaagatgtc atcgggttat cattcactgg gtcaggcaaa acagctgcgt
     5401 tcggatttcc agcactggaa aaagtaacac tgggaaaagg actccaattg cttgtcattg
     5461 tcccgactag agaactctgt aaccaggtcg caaaagagtt tcgaaagttc gctaagtacc
     5521 gaaaaacgtt catcgtcgaa gtctatggcg gcgtttctat tatcccgcaa atagaccatc
     5581 tcaggcacgc ggacgtagtc gtcggcacac cgggaagact gctcgaccac ctctcacggg
     5641 gaacgataaa cctcggccac ataaaaatcc ttgttcttga tgaagcagac aaaatgttcg
     5701 agatgggctt tattgaagat atcctgaaaa tcatgtcacg gattcccaag aatggccaga
     5761 agttattttt cggcgcaacg atgccgtctg caatcatgga catagcgaag agatacatga
     5821 ataatcctga aaaagtaaag atgcagtcgt atgtcgacag aagcaagctg atccagcatt
     5881 attacaacgt gaaccgcggc aataaatttt cgttgctgtc gcacatcctc aagaaagatg
     5941 ggcataacgg gttaacgatt gtgttttgtg gcacacgaca cggcgtcgat atgattacga
     6001 gaaacctaaa ccagcagggc ataaaagcac atgcactgca cggagggatg acacagaaca
     6061 gacggaaaca agtaatggac atgttccatg gaaaaaaact ggacgtatta gttgcaagtg
     6121 atgtcgctgg gcgaggaatt gacgtcaaaa acgtgatgct tatcgtaaat tacgatttgc
     6181 ctaagacatc cgaagattac gtccatagga ttggacgaac agcacgagca ggatgcgatg
     6241 ggaaagtcat atcattatta tcttcagagg accacgataa tttcagaaga attcttgagg
     6301 acagatctct cttgatccat aaaatggaca cgccagaatt tgaacgcgtg gaattcatta
     6361 gaccacagca acagcaccaa cgacctttcc agagaagatt ttctgggcac ggaaattctg
     6421 gacaaagaag attcaggtaa taaaattttt acttcaaagc tttcttaaac ttcgtcttga
     6481 actcagttgc atcttttttc agagattcta tggtatctaa aagaactttc ttcgcatctt
     6541 ttttttcagt ctcaagaaaa acagtaactt tttccgtctg aggatgtttt tggttataac
     6601 cggaaaccac aacagaagga tccttccaga gctctttggt aatcaagttt gcaaaggtat
     6661 gtgtttcccc gacaagctca aacttcaatc ggttcttgtc atgctcgaga acgtttactt
     6721 ccatagagct atgcggtttt attctttctt tttaaacctt tctattcctg tccgtaagtt
     6781 cctataatgc ccggatatct cccacaacac gagtatatac tttcacgcca tgatacgtgt
     6841 tagggatttc caaacccacc ggcagatctt ctcgtaatga aacataaaag caacgttcac
     6901 cagaaatgtt tgacatctta atctttttat ttctcattct ttcaattaga ccagcatcag
     6961 aaatcccaat aaaattcaca taggaacaat aaggctcttg cttcatatat tccttagtaa
     7021 aatcttttag aagctcttca atactttttt gtgccactta tttttctata gtcagtaatc
     7081 ttttatagtt ttctattgta aagaaaagcc catcaatgaa attttaaaga gacaatctct
     7141 cctgtaacct gcgtctggac atttatgcct ttgtacgttt caggaatttt cagccacaca
     7201 ggcaacggtg cacggagtgt cacataaaag taaagcttac tagaaacagc cacaccattt
     7261 tctaagtttc ctacaacgga atcatgcaac gtttgtaaga tcccttgtaa aaaggcagga
     7321 gaagattctt cctcttgttc ccgtatccat ttttccaagt cttcatccaa aatagtcacg
     7381 ctatcgacaa agtggcagta cggttcattc cactggtacc tataagtaaa ttcctcaaaa
     7441 agctgtccaa tatgctccgc agtcataaga aaaaagaaag gtatctgctt tttatatatt
     7501 ttgccagaat ttattgaaaa tgagatacaa tatttatata aaccactgtc aaaacaataa
     7561 ttacaaaata caaaaaatgt gaaaccaatg gaaatagcaa agcctatacg catggcacga
     7621 atggtgaact tttttcgtgg tcacacatat gctattccta gaattataga caattatttt
     7681 aggcggtacg ttctaagaca acaatcacta cggtatcttg aagtcgcttt gaattacaac
     7741 tgtaacgcag attgtttttt ttgttcctgt agccgcacga agttcaggga aagggacgat
     7801 gtccaaggga aatccttcac tttagaagaa atcgaatctg tggtagtcag tgcaaaaaaa
     7861 tgtaatacaa ttatgattgg aatagctggc ggagaaccgt tcctgagccc gcttcttgaa
     7921 gaaagtgttc ggatcattcg aaagcacaag attcttccgc tggtagtgac gaatggtatt
     7981 cttgcaagca aagaaagatt ggtacgcttg aaagaggcag gtctctgtgt cttctgcgtc
     8041 agcctccatg cacatggcaa acagcatgac gaaattgttg gtgtccctgg cgcatacgaa
     8101 aaagcgttaa acgcgctgtt cattgcaaaa gaaattggtt tagcaccgca aggatgtcta
     8161 acccctacgc atgagagtat taaaagcgga gagtttgaac gcctcgttaa tttgttaaca
     8221 aaagaaaaaa tacctatgac gctggactac ccagctcctt caggaaaaac acaaggagat
     8281 ttggacctta tgctaacttc atcagagata aagtatgtcc gaaacctttg tgcaacgaac
     8341 ccgtatgttt ccctggactt acaaaacaat tatgatggat actcctgtcc agctggtgac
     8401 gtttgtgcat atgtaacggc gtatggggaa gtgttacctt gcccttttat ccaaatctcc
     8461 tatggaaact tgcgacagga accgttagat aaaatttatg cgaggatgtc tagcgcacca
     8521 gtcttcaaaa aacatgcaca gtattgcctt gctggtgagt caaagaaatt tgtgaaagac
     8581 tatctttttc ctattggaga aaaacctcct ctaaaggtaa atgatcatcc attaagagat
     8641 gaaggtttgt tagagtgagt taagcttatg gaaaagaata ttcaaacgtg gaaccagcaa
     8701 gcggcagaag gcggttatca ttataggttg gatcctgtag agaaggccgt tgatgatcat
     8761 cttaacgatc tcttgcaaaa gatatttccc tatgaagaat tcaaaggaaa aaaagtttta
     8821 gatgtagggt gcggtactgg ggatttctct ttaattctga ttcttcatgc aagtgaagta
     8881 gttgggatag atccagccga agcatcaatt attttagcaa aaacaaaaat gccacttggc
     8941 aacataaaat ttatcgtaag ttcagcttat gagatgccat ttcctgatga ttcttttgac
     9001 attgttgtat gtaggaatat gttgcatcat ttagacgagc cagagaaggc aataaaagaa
     9061 tgttccagat tagcaaaaac gattgttatt atagaatcta atggcataaa tccttataga
     9121 caaatcatga aaagagtttc aaaagtctac aaggaaagag gcgaaggtgc aattcttgtt
     9181 tctcaattaa aaaagatgtt aaataataat gggtttcggg tgcaaagaca aaaatatggt
     9241 acttttattc ctccggctgc accacgttgg agtttggggt ttcttacatg gatagaaaaa
     9301 atagttgaga aaacgccgct tattaaattt ttcggcggga cttatatcgc gattgcacag
     9361 aagcggcact gcttacaatt tgttcaatct catacggatc tttatttgta taatatgctt
     9421 tagtttgcat ttcagcaatg acaccgatga gaaagatctg aagcccgcct aagaaaagga
     9481 cgactgaaaa aagaagaagc ggcccgacaa gaagcggaat ctcttttata attgccatta
     9541 aaaacacaaa taagagaaca agaaatgaaa gaaggataga aattaaaccg attgctccaa
     9601 acatatgcag aggctttgtt gcatattttt cccaaaacaa aagtccaata aggtcaaaga
     9661 aacccctcca taggcgtttg actccatact ttgtttgccc atgttttctt atgtggtgtc
     9721 gcactttgac ttcaaccact ttaaagcctt gccattgaag catcaacgga ataaatcgat
     9781 gcgtttcgcc caaaagtttt agatttttta cggccttgct tttatacact tttaaggtac
     9841 aaccagagtc atggattgta tcttttgcaa tgacttttct cacaaagcca gcgagaagag
     9901 atggtaaaat ttttctgaga gagggatccc tgcggttata tctccaacca cagacaacat
     9961 catagcccct gtttaaaaca tcaatcatcc gggggatatc aaaaggatcg ttttgcaagt
    10021 ccccatccat cgtgacaata atatcgcctg tagcgtgttt aaatccggcg ttcatcgcag
    10081 cagattgtcc aaaattcctt gtaaacctga tgacttttac tttcggatcc aattttgcta
    10141 acgtcaaaag tctagaaaat gttccgtctg tacttccatc atcgataaat agaatctcat
    10201 attctggagt aagtttctct aatgtttctt taattattat tgtgagaagt gagatgtttt
    10261 cttcttcatt aagcactggg acgacaacag agatatacat ggttgcagaa taatttttcc
    10321 agagttatat aaaagttt
//
LOCUS       DATDZU010000053        24715 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2291642, whole genome shotgun sequence.
ACCESSION   DATDZU010000053 DATDZU010000000
VERSION     DATDZU010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 24715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24715
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291642"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1385)
                     /locus_tag="VJJ79_01675"
     CDS             complement(<1..1385)
                     /locus_tag="VJJ79_01675"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamG domain-containing protein"
                     /protein_id="HLC22461.1"
                     /translation="MVQKKTVEGKSHAISFLHEKDSRATAHLEKVPKQFSWKPLFLIA
                     FLLLTLAGLFFAKDSIVGYIFLEPENIVKFAIQAEWNLSNGLVRISQNETVYDEANLS
                     ALVEENFIVVYLDNYNLSNGYVYVDLIIDDTLVDSEYVYYIIKETSPELALTPIDNLT
                     TNMALDNEPVVVTKDESASTTAYSGWFQGNSTGTLQVDHVIVEPKIPYINNTLNCSNG
                     SVSTDVSSLLYLWYVNETSLRYDNRSTLGTGNFTAHDQIDCAIAPQNGTNLLAYWAFD
                     EGQGSNVYELVNNNSGKFINASWPRGRDFYAVNLSVSQNISILNTTYAVNASRVFTHE
                     MWVMPKSNGNGDVFRLNFFRIYFASGGFLKVDFPTGAGASEQKINSTGAVQTNVWTHV
                     ALTYNNSLLSIYINGALDNATRVTGNVPIYTGNVTFGQEYDTSLVTYLDEYVIYNKSL
                     TQEEVTEHFRNG"
     gene            1500..2063
                     /locus_tag="VJJ79_01680"
     CDS             1500..2063
                     /locus_tag="VJJ79_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLC22462.1"
                     /translation="MKTGIAVSDAMTTKPVTIGTDETVLAAVKLMQKKHVGSLLVVKN
                     DALKGIFTERDLVRVVAKGVNLKELKISEVMITHLHTAKPSDDLAEAIHHMQKNKVRR
                     LPIVYKNKVVGMLTQQDIIRVQPALWEILMGRGVIKVKKEKKKYMEGECDICENFAEL
                     HEHNGQYLCAECLEEEGEKPEEDKELE"
     gene            2104..2586
                     /locus_tag="VJJ79_01685"
     CDS             2104..2586
                     /locus_tag="VJJ79_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22463.1"
                     /translation="MVSARIHLIKNYQISHHAYVDIFGALKEIPVWFNLMQYDFIEKG
                     LSEKEAGAGHEIDSEWIATRDVTDYLQFEIKLRFLAKDVKKVVLESGEETYWVRLLIV
                     IDSTLIKDHKNEFGETWHDKFFQKFYERFLMKKTIKGYAGRIIVETLDLISKLKMYLK
                     "
     gene            2622..3137
                     /locus_tag="VJJ79_01690"
     CDS             2622..3137
                     /locus_tag="VJJ79_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22464.1"
                     /translation="MPQRDILGPAKTVSSTLTYDQKALYKFLGKWFQDRQYNVLEKDY
                     KERVNADSKRLYQFKWVADKKVDDYTAFFMTLDFKAEVENVPIETHDGKKKTAQNGEV
                     TITFQAYVERDYEDEWALTKERPTQRLLREIYDKLVIKGRFSRQEGELRKDLKGLIND
                     AKTYLKTHRYD"
     gene            3179..5164
                     /locus_tag="VJJ79_01695"
     CDS             3179..5164
                     /locus_tag="VJJ79_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22465.1"
                     /translation="MKKSGIFFLILILVTGCTNGTSESQGFFVTEQDADLMLSGIDFN
                     NAGDPLLFNHNGGIATDGTHLILADRNNNRILIWNTLPEGNEEPNIVLGQKDFYTNNP
                     GNGSDELSWPIAVATDGTHLIVADTWNHRILIWNSFPTENGQAADLVLETPEKPHDER
                     GDLKWPWAVWTDGKKLVVTSTQAGQVFIWNEFPTENNQEPDVILANVDLGTPRSIASD
                     GTHLAIGDHNARGTPSTPGGAKGTFFWNTFPTEDDQPYDFFVSNPFRMGEEQASDAIG
                     GEWMFGPTVTEDGKLFALTNGVFLIWNAFPESEDDAPDLVLGDYSGYDFGGSQTGDGS
                     GVAVAGEKVFISLANGNKVVVYNEIPTEISQKPDFALGSPNIDTNTFYSHYSITNGIP
                     ASNGESLFVASDFDAKLSVWKQIPDESGAYPDFVYNLSMRPKDSDLFEDTFVLAGHET
                     VSIWDELPLKGQQPDRVYEGSIGNVLLQNLYGVALDDKYFYLSDKTAKKVYVYEGIPE
                     ADDNPVFTFSLDDAPGKLSSDGTYLVVGAPDPSDHDIEIYRIADISEESEPIILQSLG
                     TFNSPAGVHVFGGQLFVSDTLNNHVYIWKDIEDAIALKKPDVVLGEQVRTEKEILPQI
                     GKNKLFWPTSIWFDGSYLWVSELKFSFRILRFSPQEE"
     gene            complement(5165..5237)
                     /locus_tag="VJJ79_01700"
     tRNA            complement(5165..5237)
                     /locus_tag="VJJ79_01700"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5202..5204),aa:Val,seq:cac)
     gene            complement(5322..5591)
                     /locus_tag="VJJ79_01705"
     CDS             complement(5322..5591)
                     /locus_tag="VJJ79_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010870686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin RelE"
                     /protein_id="HLC22466.1"
                     /translation="MHSIAIEEKLQKILEKISKKDKILYRAFQRKVEEILTCEDVNHY
                     KNLRKPLQHLKRVHVFGSFVLTFRYIESEDKIILYDMDHHDNIYQ"
     gene            complement(5584..5829)
                     /locus_tag="VJJ79_01710"
     CDS             complement(5584..5829)
                     /locus_tag="VJJ79_01710"
                     /inference="COORDINATES: protein motif:HMM:NF022340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2683 family protein"
                     /protein_id="HLC22467.1"
                     /translation="MKQTLVALNEHQDQILQIVKAKQRLKNKVEAVQFIIKEYEENHM
                     EPELRPEFIKKVQKIEKEGKFREYKSLSQLWKDIEYA"
     gene            complement(5883..5955)
                     /locus_tag="VJJ79_01715"
     tRNA            complement(5883..5955)
                     /locus_tag="VJJ79_01715"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5920..5922),aa:Val,seq:tac)
     gene            6035..7375
                     /locus_tag="VJJ79_01720"
     CDS             6035..7375
                     /locus_tag="VJJ79_01720"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22468.1"
                     /translation="MNILLIYPPFCTPSMMPYSLAYLKSFLEQNCQAEIKVLDLNAKF
                     HRLRFPKQYQELQRSMSSEEYAQLLTTFDKLSRPIYAENNKKVIRNELPDHFADMVRH
                     IEEQHPDVVAISFVYNSQGFYGKCLVDALREKGILCVVGGPAVTNTIKKMTVHLKNEI
                     EMLQFLKKQGIVTKEQHTTIIPDFSSFYQEDYLSKERIIPLKTSSTCFYKQCTFCTHF
                     AQVPYAEYDLDNIRQTVLQANAKYVYLIDDMISKERLIALANLFSHLDVKWLCQLRPT
                     KDILGILPQLYAGGLRVVSWGVESGSQRILDLMQKGTEIDSIQNILRESHAAGIKNMV
                     HIMFAFPMETKEEFLETIGLIDKNKVYIDIVMTCIFGLQKGAKVYKHPAQYGIIQVTE
                     KQRTVLDPSISYTISTGLHNEEARVLQKKYQRCIDRINKLPKIYNYFKEQTLLI"
     gene            7533..9701
                     /locus_tag="VJJ79_01725"
     CDS             7533..9701
                     /locus_tag="VJJ79_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007044043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor EF-2"
                     /protein_id="HLC22469.1"
                     /translation="MADKSSEKVTELMKLPAKIRNVGVCAHIDHGKTTFSDSLLAGAG
                     MISEELAGRQLALDFHADEQERGITIDAANVSMVHSIEGQDYLINLIDTPGHVDFGGE
                     VTRAMRAIDGAIVLCCAVEGIMPQTETVLRQALRELVRPVLFINKVDRLIKEVKLTPD
                     QMAQRFIKIIDEVNALIVQIAPKGYGEKWQLSVQDGSVAFGSAFHKWALSFPYMQKKG
                     LTFKDVISAYETESYKELAKKAPLHEIILDMSIHHHPNPLDAQKYRIPKIWHGDPESE
                     MGKTLINCDPNGLAAFVVTKIVIDKHAGEIAAGRLFSGTLKHGQEVYMNMAKKAVRLQ
                     QVSVYRGAQRMVLDEVYAGNIVGLVGLKGVFSGETVSTEEMEPFEAIKHIFDPVITKS
                     IEPESSADLAKLVEVLKQVGKEDPTVKIEINEETGENLISGMGELHLEVIENRIKSEK
                     GLKVKTSPPIVVYRETVMKKSGEFEGKSPNKHNRLYFVVEPLDDNIVEAIKSGDISEG
                     RIRKKDTVTFDKLIELGVENKDAKSYVQIFNGNVLVDNTRGIVYIGEILGLVMDGFEQ
                     VMKKGAIASEPCTKVRVRLTDCKLHEDAIHRGPSQMYPAVREGIRMAISDAKPSLLEP
                     IQIMQIEAPAEFLGEVSKLIQNKRGQLLSMEQEGIMTTVRAALPVAEIFGWSSELRSA
                     TSGRGSSFIIDQRFEKVPEGLQQKVTQQIRQRKGLKEESI"
     gene            complement(9698..10180)
                     /locus_tag="VJJ79_01730"
     CDS             complement(9698..10180)
                     /locus_tag="VJJ79_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22470.1"
                     /translation="MRWNKIILSLVVILLYISLVFMGANVFFPKYAGSHSYYNEYRSC
                     SYPEGKADAPVYIENETCMQEQRAAQDAFEIDKRQYDGNKYVFIVILNLLVLIAAFFI
                     TAEDSVIIGLFLGATITSFISTWVYFDTQSKIGFGILFVMFFVTLSFIAKKKETFTLR
                     "
     gene            complement(10202..11038)
                     /locus_tag="VJJ79_01735"
     CDS             complement(10202..11038)
                     /locus_tag="VJJ79_01735"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HLC22471.1"
                     /translation="MELNEDLPFALQELRSDETVHENAIETLSGLLIDAVEKRVDVPI
                     AIAFSGGVDSTLLAFLCTRLEKTFTLYTVGLEGSKDLDAADAVAHAYGWPLKKKILKE
                     EELENIFKEVIRITKKHDPVTVGVGAVMYTVMSMADEDVVLTGLGSEEIFAGYERHKG
                     DINAACWDGMIHIWERDITRDIAIAAHFGKEVRLPFMDKDLIAYGMKIDPLLKIKNEH
                     RKYVLREAAVNLGLKKEFAFRKKYAAQYGSKIDALLEKLAKKRKLTKSVYLGQLATGS
                     LK"
     gene            complement(11152..11331)
                     /locus_tag="VJJ79_01740"
     CDS             complement(11152..11331)
                     /locus_tag="VJJ79_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015412475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CxxC-x17-CxxC domain-containing protein"
                     /protein_id="HLC22472.1"
                     /translation="MRDFNRGSGSDGGFRRDFGPREMHKAVCSECGKECEVPFKPQEG
                     KPVYCRECYAKKKRF"
     gene            11491..12231
                     /locus_tag="VJJ79_01745"
     CDS             11491..12231
                     /locus_tag="VJJ79_01745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22473.1"
                     /translation="MEYTTTTHFARYFDLFTKAEELLVTRDRPQFGLVIGAGAGKDAL
                     FQCAGPYWGFPPEQMFSWEPVELLVALRHAHKESQVTVIDPSPKIAQCLAGQKVVPVS
                     DFWGTPTSYVLRFCATLHSVKAREEMLEYLNTNLKRKGIANRVHMLARALCPPPVYRQ
                     EDFLQAELDVQYDVVTALSSVRYLAPSDDVYTKVAEAVAPNGLLLVSDGENGEPRRFE
                     NCGLERVFLEEFTLPYLEYCYHAIFRKR"
     gene            complement(12228..13739)
                     /locus_tag="VJJ79_01750"
     CDS             complement(12228..13739)
                     /locus_tag="VJJ79_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22474.1"
                     /translation="MGPYKRSFMSFPIVATLLLPFSKETIAEERSSDFSDYSTSMLLE
                     GLEIDTNIYRREGKQFELVHRMENNDISELFLGFENAAYTLDGAEISLDKFLLYTDDP
                     VILNKKSPIFEQIAVRLGPWGDLLRENVEWITFNPKVLLQTGETLSSVRGTFKDNMVN
                     VSSCEKQNVTARLLATFVHEAQHAKNKNMEQNFSTIFEERTAFAEEYIFLEHYTAMHY
                     DAYGEYLRDVTRRRVMIADYLSQDVFGKDFVNVYPLETILGRELLRASIPTGTLEKYT
                     IVNTRNHDLDKELMTAVRIALLVKTQSKEEATKILFPLLRKERLLNMNAHSALKYLYP
                     TKFDDAFGGESPVTKETQLPTLEELLGKPMTEEKKEIAVVVAPENVAPTPEIGIEEDV
                     IYPYREEEKHIRAYVEKQFRPVIENRDFFFVSDILSTLNSYNASFPGDPDGEETLWVF
                     IQNKPTSTGDEINVYQLLSIVVNPEENKVITKEDLYRNGELFTTTWTLEKARH"
     gene            13826..14698
                     /locus_tag="VJJ79_01755"
     CDS             13826..14698
                     /locus_tag="VJJ79_01755"
                     /inference="COORDINATES: protein motif:HMM:NF016364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HLC22475.1"
                     /translation="MNEEYPRKIYFSSLRKEGVSLSFICAVLSVGVLGEGYVRNLPRR
                     AEVAPSVFSVPVPPEIVPTIETQPSQMFFDEQIVEKTLLKDGDPNIVVYYSDFVNGDK
                     KFNLKLSEYVKYKVKDHIQWAAGAIPGRYLPYITYQDPTIEEIAAEITTGSTSKEEEA
                     RRILNFVHQQFYDISLENSPQFDYVKYPLETLVEKNGDCEDISILGLSLLKARGINVA
                     YFIYKPQKDEIMGHFAMGIAGDFTGTSFEQDGVKYFYVEPTGTDMLSNMSKFDIGQVR
                     DEYKDSVPKIVVVK"
     gene            15039..15554
                     /locus_tag="VJJ79_01760"
     CDS             15039..15554
                     /locus_tag="VJJ79_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013720069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19e"
                     /protein_id="HLC22476.1"
                     /translation="MASVYDNDPTELLQKAAQELKKNKGTQIPNWAKVVKTGVGQERP
                     PENPDWWYIRVASVLRKIYLRGPIGVSKLRTFYGRKKNRGVRPEEFRKGSGKIIRVIL
                     QQLETAGLVKQAQKGAHKGRVVTPKGQSFLDTIIRRHGSRRNQKTEAPVASAGNAAAT
                     IPGAASAPAAD"
     gene            15505..15777
                     /locus_tag="VJJ79_01765"
     CDS             15505..15777
                     /locus_tag="VJJ79_01765"
                     /inference="COORDINATES: protein motif:HMM:NF014086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HLC22477.1"
                     /translation="MLQQQFQEQHQLQQQIEQLEGVVKSHLSPEAVARYWTLKAAHPE
                     KGIQSLVLISELLQAGRLKGPITDEQYKALLERLSPQQRETKITRK"
     gene            15774..15947
                     /locus_tag="VJJ79_01770"
     CDS             15774..15947
                     /locus_tag="VJJ79_01770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22478.1"
                     /translation="MSRFIHPAKKTRLAKKGRQTRWAPFWTIPRTFGKGRRVHPGRLT
                     HIKRNWRRNKTKA"
     gene            15949..16215
                     /locus_tag="VJJ79_01775"
                     /pseudo
     CDS             15949..16215
                     /locus_tag="VJJ79_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011844804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31e"
     gene            complement(16599..17375)
                     /locus_tag="VJJ79_01780"
     CDS             complement(16599..17375)
                     /locus_tag="VJJ79_01780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22479.1"
                     /translation="MNLREFIHSALWYTATAGITILITTLFYKGVETHARKASETYVR
                     KNLLYFIKAQEDELHIEHFGVPHVEFLPIEEIKHPSHFGEYEEENNTISFVESFAITP
                     KPTMVNFFIKLAYPSEIMYDLERATHHELGHFYMDSLSEHLTGNNWPGFSTEITVREE
                     ICLKVLAEGTAEYFERKMKDDTIKYYPVDHFLDFETMIKHQKKFFYEGGFQIVGPIID
                     AYGITGITYIIQHTPKTIQELRTYQQKALEDLALTEEIKP"
     gene            complement(17447..17689)
                     /locus_tag="VJJ79_01785"
     CDS             complement(17447..17689)
                     /locus_tag="VJJ79_01785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22480.1"
                     /translation="MEKTLFFEDLNKDKIKHILKEYGKQIGVDASYANKVCDKKFCTL
                     IFLKDVTSITPFNINKKGYGMMSAWITVQNISTIRN"
     gene            complement(17944..18483)
                     /locus_tag="VJJ79_01790"
     CDS             complement(17944..18483)
                     /locus_tag="VJJ79_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015051989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HLC22481.1"
                     /translation="METLSIKGHEFNALPIRDSFDRRALQYKNKIIYTLGKIGLTSDD
                     INIDLEPVAIKNTPASATWYCDGYRMYYSYKSAQKYVDNLYVVYKVIELEIADLIAGE
                     KTFEEFLLNFTEKDDVEHMRKEARERLGVGQDVLDMNEIDKKYKELAKKHHPDMPEGN
                     LEIFKEINNAHKILKRELL"
     gene            complement(18637..18795)
                     /locus_tag="VJJ79_01795"
     CDS             complement(18637..18795)
                     /locus_tag="VJJ79_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22482.1"
                     /translation="MENKEDWEEDYLSVYDKEDYLSVYDEDGIFSLLENDAIDIFEAG
                     FMHGYIAG"
     gene            19068..19652
                     /locus_tag="VJJ79_01800"
     CDS             19068..19652
                     /locus_tag="VJJ79_01800"
                     /inference="COORDINATES: protein motif:HMM:NF018627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22483.1"
                     /translation="MSYDNIALFDLDGTLVDFDTAMFRDLYAIASPEDPYISDISFPY
                     PEYIKNRRAMIMRQPGWWRTLDELAVGFDVLCACLDIGFDIHVLTKGPKKNPNAAKEK
                     IEWFERHVLPVAPDAKITISGDKGLVYGKVLVDDWPSYVEGWLEHRVRGLVVMPWHSY
                     NASVKHPNVIHYNGTNISDVRTRLEEAYARQPKQ"
     gene            complement(19659..20699)
                     /locus_tag="VJJ79_01805"
     CDS             complement(19659..20699)
                     /locus_tag="VJJ79_01805"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLC22484.1"
                     /translation="MNLFNNVLQHNETLFKNEIVLDYEYLPHILKFRESQQQHIATII
                     KPLFANRMGSNILITGKPGIGKTAACRHVLRDMEQHSDKIVSIYINCWKQDTAYKVLV
                     DICMQLGYKWVQNKKTNELMDEIAKILNKKAAVIVLDEVDKLKEEQVIYQLVEDLYKK
                     CIIMISNSKDFLAFLDQRTRSRLLPEILEFEPYTYKETEAILQERKETGFYDNVWSDE
                     EFMPIVEKTADGKDLRIGLFLLRESGNAAENRASRKIQKRDVDIAVGKLSSFLKSSKV
                     LDEEEQEVLEIVKEHQGLPSTEIYELYKELFDKSERTFRRKVASLKENHYLEARDSKD
                     KNGTIVPHLFVK"
     gene            20896..21228
                     /locus_tag="VJJ79_01810"
     CDS             20896..21228
                     /locus_tag="VJJ79_01810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22485.1"
                     /translation="MKAYVALKDISLDNDNGESYWIPAGTVYFPENGIKLKKGDCKYF
                     LEEEFLYMKRVSNCVQSPKVKIVDIPDAMVQLLLYHGEQITNEEKKFNNLRADLYELI
                     RNNLDGIL"
     gene            complement(21330..21683)
                     /locus_tag="VJJ79_01815"
     CDS             complement(21330..21683)
                     /locus_tag="VJJ79_01815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22486.1"
                     /translation="MTDLVCCLSTGKGTWAEVAKLINNYNWGNIFLVTNDFGKEKFTT
                     EKEVRCILVDVNKGMEAMKNAILEGLKEKVSTEVGVNFISGSGKEHMALLSALIQLGV
                     GMRFIVAADSEVKEI"
     gene            21791..21946
                     /locus_tag="VJJ79_01820"
     CDS             21791..21946
                     /locus_tag="VJJ79_01820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22487.1"
                     /translation="MVEDTVTYVCTMCRFRFRRGAKWSHPLCPNCGKEWCYEREDTVN
                     KLINESL"
     gene            complement(21930..22661)
                     /locus_tag="VJJ79_01825"
     CDS             complement(21930..22661)
                     /locus_tag="VJJ79_01825"
                     /inference="COORDINATES: protein motif:HMM:NF015170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HLC22488.1"
                     /translation="MKNFWEIVNKVIHECDIILLVMDARFPELTYNQEIKEKAGTKPV
                     IYVLNKADLAQKSELIKWKRKHRNAVFISATKRLGTGMLRTKILEVARGEKVRIGVVG
                     YPNTGKSSLINALRGRHVAPTSSASGFTKGKQYIRISENIMIYDTPGVLPYMEKDKVK
                     LAMIGAEDFTKVKDADLVVLELIKQHKKIMCKYYKVPEDDQEKVLESIAERYHKRAKG
                     GVLDLNAMARMILKDWQRGKIIDSH"
     gene            complement(22802..24559)
                     /locus_tag="VJJ79_01830"
     CDS             complement(22802..24559)
                     /locus_tag="VJJ79_01830"
                     /inference="COORDINATES: protein motif:HMM:NF020086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3362 domain-containing protein"
                     /protein_id="HLC22489.1"
                     /translation="MQRDFLPTTWNEGRKYYRDFHSFDIVFVTGDPYYDHPLNGLALI
                     ARLLDKKGYKVAIIPQPLSDQDYQVCGRPKYFFCITSGLLDSMLANYTPMLRKRENVL
                     VPERALMVYTQKLKQFYSGCMTVLGGVEATLRRFTHFDYRTNALRRGILNDTKADILI
                     FGNGERTILNLLKKIEKCTINEKGSDFEKVREGLDLASLNGIAFRIKKEEINPKIRKL
                     PSYEDCITDKNKLNLLTRMHYLLPEAAFIEPCGLGFIQHNRSSHILTEKELDLIYELP
                     LTRELHPTTKNLNMQKGMLGRLKTSVIIGRGCWGSCNFCVIPLVQGKEVAKRSKESIL
                     KEVEKLYMEGNTLINDFTLPTLNMYGSYCSLYDEEEKIPSLITEKAVVVYNKTKYCNQ
                     QCVGCKYRKLSDDLVPLLEGVEKLQKKHKGKELELRSAIRHDIILDQQELFRNIMKFT
                     NRLKIAPEHTSTEVLKQMNKSNPGAFEEFLKLYKQVNKEQNTNKNLVPYFIAGHPGTT
                     KKDMGKLKEYCNKKEIYVNLTQVFTPTPGTASTAMYYTEENPLTKEKVYVPRSFREKK
                     DQKNILLNNEDEDFTDENS"
BASE COUNT         7271 a         4776 c         5229 g         7439 t
ORIGIN      
        1 ccgtttctga aatgttctgt aacttcctct tgtgtcaagc ttttgttata gataacatac
       61 tcatcgaggt atgtcacaag actagtgtca tactcttgac caaatgtaac attaccagta
      121 taaattggaa cattaccagt aacccgtgtt gcattatcaa gtgcgccatt aatgtaaatg
      181 gagagcagcg aattattgta cgtaagtgca acgtgcgtcc aaacatttgt ttgtaccgct
      241 ccagtcgagt taattttctg ctcggaagca ccagcgcctg ttgggaaatc aactttcaag
      301 aaacctcctg atgcaaaata aattctgaaa aaattcagtc ggaaaacatc accattcccg
      361 ttacttttag gcatcaccca catttcatgc gtgaagacgc gagaggcatt gacagcatag
      421 gtagtattga ggatgctgat attttgtgaa acactaaggt ttacagcata aaagtctctt
      481 ccgcgtggcc agcttgcatt gatgaacttt ccagagttat tgttgactaa ctcgtagacg
      541 ttgcttcctt gtccttcatc aaatgcccag tacgcgagga ggtttgttcc gttctgcggt
      601 gcgatggcgc aatcgatttg atcgtgagca gtaaagtttc ccgtgccgag ggtacttctg
      661 ttgtcgtacc gtaacgatgt ttcgttcacg taccagagat agagcaggga agaaacgtct
      721 gtgctcacgc tgccgttaga acagtttagc gtgttgttaa tgtatggaat ttttggttcg
      781 acaatcacat ggtccacttg caatgtccca gtggaatttc cttggaacca gccgctgtac
      841 gcagtcgtgg acgcgctttc atccttggtc acaacaacag gttcgttatc gagcgccata
      901 ttcgtcgtca gattatctat gggggtgagc gcaagttctg gagaagtttc ttttatgatg
      961 taataaacat attcgctgtc aacaagagta tcatcaatga tcaggtcaac gtacacgtac
     1021 ccattgctga ggttgtaatt gtctaggtac acaacgataa aattttcttc gacaagcgcg
     1081 gaaagatttg cttcatcata taccgtctca ttttggctga tgcgcacgag cccattgctc
     1141 aagttccatt ctgcttggat ggcaaatttt acaatattct ctggttctaa aaaaatatag
     1201 ccgacgatgg agtcttttgc aaaaaaaagt cctgcaagag tgagcagaag gaatgcaatt
     1261 aagaatagag gtttccatga aaactgtttt ggtacctttt ctaagtgtgc tgtagctctg
     1321 gaatccttct catgtaagaa agaaatagcg tgcgatttcc cttccaccgt ttttttctgg
     1381 accattctct tttcttatct aatatcagtt ctattgtatt aaatatttat ctcttcattt
     1441 acataatctt acaaatggca caataaaatt tatatagtaa taaggatact atttatttta
     1501 tgaaaacagg gattgcagtt tctgacgcaa tgacgacaaa accagtgact attggaacag
     1561 atgaaacagt tcttgctgca gtaaagctca tgcaaaagaa acatgtgggg agtctgcttg
     1621 tcgtcaagaa tgatgccttg aaaggaattt ttaccgaacg agaccttgtc cgtgtcgtag
     1681 caaaaggtgt gaatctgaaa gagcttaaaa tcagcgaagt gatgatcaca cacttgcata
     1741 cagcaaaacc gtccgatgat cttgcagaag ctatccatca tatgcagaaa aacaaagtga
     1801 ggcgcttgcc aatcgtctac aaaaataaag tggttggaat gttaacacaa caggacataa
     1861 tccgtgtcca gcctgcatta tgggaaattc ttatggggcg gggggtcatc aaagtgaaaa
     1921 aagaaaaaaa gaaatatatg gaaggagaat gcgatatctg tgaaaatttt gcggagctgc
     1981 acgagcacaa tggtcagtat ctctgtgcgg aatgtttaga ggaagaagga gaaaaaccgg
     2041 aagaagacaa agagctcgag taaccgaaat aaatattaag catggttctt tctatatcct
     2101 tgtatggtca gtgcaagaat tcatctcatt aagaattatc agatctcgca tcatgcctat
     2161 gtggacattt ttggggcatt gaaagagatt cctgtctggt tcaatctgat gcagtacgat
     2221 tttattgaga aaggattaag cgagaaagag gcaggtgcag gacacgagat agattctgag
     2281 tggatagcaa cgcgtgacgt tacggattat cttcagtttg agatcaagct tcggtttctt
     2341 gcaaaggacg tgaaaaaagt agttctcgag tccggcgagg aaacatactg ggtcaggctg
     2401 ttgattgtca ttgacagcac gttgattaag gatcataaga acgagttcgg agaaacatgg
     2461 cacgacaaat tttttcagaa gttttatgag cgctttctca tgaaaaaaac aatcaaggga
     2521 tatgcaggaa gaattattgt cgagacgtta gacttgatta gcaaactaaa aatgtatttg
     2581 aaatagaaac atttatatcc ccactatgct acaacacctg tatgccacag agagacattc
     2641 taggcccggc aaaaaccgtc agtagcacat taacatacga ccagaaagca ctctacaaat
     2701 ttcttggtaa atggtttcaa gatcgacagt ataatgtgtt agaaaaagac tacaaagagc
     2761 gagtcaatgc agacagtaag cgcttatatc agttcaagtg ggtggcagac aagaaagtag
     2821 acgactacac cgcgtttttt atgacattag atttcaaggc cgaagtagaa aatgtgccaa
     2881 tagagacaca tgatggaaag aaaaaaacgg cgcagaacgg cgaagtaaca attacatttc
     2941 aagcatacgt agaaagagat tatgaagacg agtgggcatt aacaaaggaa cgtccaacac
     3001 agcggttact tagagaaatc tatgacaagc tcgtcatcaa ggggcggttc agtcggcaag
     3061 agggagaact gaggaaagat ttgaaaggac tgattaatga tgcaaaaacg tacttgaaga
     3121 cgcaccggta tgattaatct aagaaagctt tttaactttg gttataatcc tctaggctat
     3181 gaaaaaaagc ggaatatttt tcttgattct tattcttgtt acaggatgca caaatgggac
     3241 ttcagaatcg cagggatttt ttgttaccga gcaggatgca gacctgatgc tttctggtat
     3301 agattttaat aacgcgggcg accctttgct ttttaatcat aatggaggta ttgcaacaga
     3361 tggaacgcat ttgattcttg cagatagaaa caataaccgc atccttattt ggaacacgtt
     3421 acctgaagga aatgaagagc caaatattgt gcttggtcaa aaagattttt acacaaacaa
     3481 ccctggcaat ggtagtgacg aactgagttg gccgatagcg gtagcaacag acggcacgca
     3541 tcttattgtc gctgatacat ggaatcaccg tattttgatc tggaatagtt tcccaacaga
     3601 aaatgggcaa gcagcagatc ttgttttaga aacgcctgaa aaaccgcatg atgaacgagg
     3661 agacctcaaa tggccatggg cagtttggac tgacggcaaa aagcttgtcg taacaagtac
     3721 acaagcaggg caagttttta tttggaacga gttcccaaca gaaaataacc aagaaccaga
     3781 tgtgatttta gcaaatgtgg atttaggaac accacgctct atcgcaagcg atggcacaca
     3841 tcttgcaatc ggcgatcata atgcacgtgg aacccctagt acaccaggtg gtgcgaaggg
     3901 tacatttttc tggaacactt tcccgacaga agatgatcag ccctatgatt tctttgtttc
     3961 taatcctttt agaatgggcg aagaacaagc gtctgatgcc attggaggag aatggatgtt
     4021 tgggccaaca gtaacagagg atggaaaatt gttcgcttta acaaatggag tatttttgat
     4081 ctggaatgca ttccctgaaa gtgaagatga tgcaccggat ttggtattgg gtgattattc
     4141 cggatatgat tttggtggta gccaaactgg tgatggatca ggcgttgcag ttgccggaga
     4201 aaaagtattt atctcgcttg caaatggcaa taaagtagta gtctataatg aaatccccac
     4261 agaaataagt caaaagccag actttgcgct aggaagtcct aacatcgata ctaatacatt
     4321 ctattcccat tattccatta caaatggtat tcctgcatca aatggcgaga gcctttttgt
     4381 cgcatctgac tttgatgcaa aactctctgt ttggaaacag atcccagatg aaagtggtgc
     4441 atatcccgat tttgtctaca atctttctat gcgcccgaag gacagtgacc tctttgaaga
     4501 cacatttgtc cttgcagggc acgagacagt ttctatttgg gatgagttgc ctctcaaagg
     4561 gcagcaacct gatagagtgt acgaaggaag cataggaaat gtcctgttgc agaatcttta
     4621 cggtgttgca ctggatgaca aatactttta tctttcagac aaaactgcaa aaaaagtata
     4681 tgtgtatgaa ggaattcctg aagcagatga taatcccgtt tttacctttt ctcttgatga
     4741 tgcgcctggg aaattatcca gtgatggaac ctaccttgtt gttggagcac cagacccctc
     4801 agatcatgat atagagattt atagaattgc agatatttct gaagagagtg agcctattat
     4861 tctacagagc ctaggaacct ttaatagtcc agctggtgtt catgtttttg gtggtcagct
     4921 ctttgtttct gacacgctga ataatcatgt atatatctgg aaagatattg aggatgcaat
     4981 tgctttgaaa aaaccagatg ttgttttagg agagcaagta agaacagaga aagagattct
     5041 tccacaaatt ggaaaaaata aacttttctg gccaacttct atttggtttg atggcagtta
     5101 tttatgggtt tcggaattga aattttcgtt caggattctc cggtttagtc ctcaggaaga
     5161 ataatgggcc tgggcggatt cgaaccgccg acttcctcca tgtgagggag gtatcatagc
     5221 cactagatca caggcccttg aacgacagaa aacttgcgag gtcttaaata tgtttctatt
     5281 agagaaaaaa gtgggctggg aaggactcga acctttgaaa tttactggta gatattgtca
     5341 tgatgatcca tatcataaag aataatctta tcctctgatt ctatatagcg aaaagtgagc
     5401 acaaaagatc caaaaacatg tactcgtttt agatgctgta atggtttccg tagattttta
     5461 tagtgattga catcttcaca agtaagtatc tcttctactt ttctttgaaa agcccgataa
     5521 agaattttat ctttcttaga aatcttttca agaattttct gtagtttttc ttctatcgca
     5581 atgctatgca tactctatat ccttccagag ctgggaaagt gatttatatt ccctgaattt
     5641 accttctttt tctatttttt gaactttctt gataaactct ggtcggagtt ctggttccat
     5701 atggttttct tcgtattctt taatgataaa ctgcactgct tctactttat ttttcagtcg
     5761 ttgttttgct ttgacaatct gaagaatctg atcctgatgt tcatttagag cgacaagagt
     5821 ttgtttcata ttatatttta taacatattg ttatatttaa gcttttcatg cacaataaag
     5881 tatgggccgg gaaggactcg aaccttcgac aacctccgtg taagggaggc atcatagccg
     5941 ctagatcacc ggcccgatgg caaactaaat tgataacctt ttaaatagct ttctgttaaa
     6001 aagctttata ataacacact cgtcaccaaa tgctatgaac atattactca tttaccctcc
     6061 attttgtacg ccatcgatga tgccatattc gctggcatat ttaaagagtt tcttagaaca
     6121 gaattgccaa gcagagataa aagttctgga tctcaatgcc aaatttcaca ggcttcgttt
     6181 cccaaaacag tatcaagaac ttcaacgcag tatgagcagc gaagaatatg ctcagttatt
     6241 gacaacgttc gataaactat ctcgtcctat ctatgcagaa aataataaaa aagtcatccg
     6301 taatgaactt ccagatcatt tcgcagacat ggtacggcac atcgaagaac agcatccaga
     6361 tgttgttgct atcagtttcg tctacaacag tcaaggcttt tacggaaaat gcctcgtcga
     6421 tgcactcagg gaaaagggaa ttttatgtgt tgttggcggt ccagccgtaa ctaacacaat
     6481 aaaaaaaatg accgtacatt taaaaaatga aatcgaaatg cttcagttcc taaaaaagca
     6541 aggcatagta acaaaagaac aacatacaac tataatccca gatttctctt cgttttatca
     6601 ggaagactac ctctcaaaag aaaggatcat acccctcaaa accagcagca cctgcttcta
     6661 caaacaatgc acgttctgca cgcatttcgc acaagtgcca tatgctgaat atgatctaga
     6721 caacataagg caaaccgttc tccaagcaaa tgcaaaatat gtctatctga ttgatgatat
     6781 gatatcaaaa gaacgtctca ttgcacttgc aaatctgttt agccatctcg atgttaaatg
     6841 gttgtgccag ctccgcccta ccaaggatat cctcggcata cttccacaat tatatgctgg
     6901 cggtcttcgc gtggtttcct ggggcgtgga gtccggtagc caacgtatcc tcgatctcat
     6961 gcagaagggc acggaaatag attcaataca aaacatattg agagaaagcc atgctgcagg
     7021 aataaaaaac atggtgcaca tcatgttcgc ctttcccatg gaaacaaaag aagaatttct
     7081 cgaaaccata gggctcattg ataaaaataa ggtatacatt gatattgtga tgacatgcat
     7141 cttcggtctg caaaagggcg caaaggttta caagcatcca gcacagtatg gcatcatcca
     7201 agttactgaa aaacagagga cagtgctcga tcctagtata agttatacta tttctactgg
     7261 tctgcacaat gaagaagctc gtgttttgca aaaaaaatac caacgctgta ttgacaggat
     7321 caacaaactg ccaaagatat ataattattt caaagagcaa acattactta tctaacaata
     7381 aaaggcgtag cgcaatagtg gtgtaggata gcaaagcgca gaaaaattat tttggaatca
     7441 aatgcgcaga tgctttagat actaaatgaa aaggccgcaa gggagtagcc tgaacgaaat
     7501 ctttaaatac cttcgatatt tccacaagga gaatggcaga caagtctagt gaaaaagtta
     7561 ccgaattaat gaaactacct gcaaagattc gtaacgtggg ggtttgtgca catatcgatc
     7621 acggaaaaac aacgtttagc gattctctcc tagcaggtgc aggaatgatt tctgaagagt
     7681 tagcaggaag acaacttgcg ctggactttc acgcagacga acaagaacga ggaattacca
     7741 tcgacgcggc aaacgtttct atggtgcaca gtattgaagg ccaggattac cttatcaact
     7801 tgattgacac gccgggtcac gtcgatttcg gaggagaagt cacgcgtgcc atgcgggcaa
     7861 ttgacggagc gattgttctc tgttgtgcag tggaaggcat catgccgcag acagaaacag
     7921 tgctgaggca agcattgcga gagttagtaa gaccagttct cttcatcaac aaagtagacc
     7981 gcttgattaa ggaagtcaag ctcacgccag accagatggc acagaggttt atcaagatta
     8041 ttgacgaggt caacgcgctc attgttcaga tcgcaccaaa ggggtacgga gaaaaatggc
     8101 agctttctgt gcaggacggc tctgttgcat tcggttcagc attccataaa tgggcattgt
     8161 catttcccta tatgcagaag aaagggctta ccttcaagga cgtcatctcg gcgtacgaga
     8221 cagagtcgta caaagagctt gcaaaaaaag caccgctgca cgaaatcatt ctcgatatgt
     8281 ctatccacca tcacccaaat ccactcgatg cgcaaaaata taggatccca aaaatctggc
     8341 atggtgatcc agagtctgag atggggaaga cattgatcaa ttgtgatcca aatggcctcg
     8401 ctgcgtttgt ggtgacaaaa attgtcattg ataaacatgc aggggaaatt gctgctggtc
     8461 gtttgttctc tggaacactc aagcatggcc aggaagtcta catgaacatg gcaaaaaaag
     8521 cagtacgctt gcaacaggtt tctgtgtacc gtggcgcaca gcgtatggtt cttgacgaag
     8581 tttatgcagg aaacatagtt ggtctcgtcg gtttgaaagg agtcttctct ggagagacag
     8641 tttctactga agaaatggaa ccatttgaag ctatcaaaca tattttcgat ccagtgatta
     8701 ccaagagcat tgaaccagaa agttctgcag atcttgcaaa attagttgaa gtcttgaagc
     8761 aagtgggtaa ggaagatccg acggtaaaga ttgagattaa tgaagaaaca ggtgaaaact
     8821 taatctcagg aatgggagag ttgcacctgg aagttattga gaacaggatt aaaagcgaga
     8881 aggggttgaa agtaaaaacc tctccgccga tcgtagtgta cagagaaacc gttatgaaaa
     8941 aatctgggga gtttgaagga aagtctccga acaagcacaa caggctttac tttgttgttg
     9001 agccgcttga tgataatatt gtggaagcaa tcaagagtgg tgatatctct gaaggcagaa
     9061 tccgaaagaa agacacggta acgtttgaca aacttattga gcttggtgtc gagaacaaag
     9121 acgcaaaatc ctacgtacaa atttttaatg gcaatgtgct agtcgataac acgcggggga
     9181 ttgtctatat cggagaaatt cttggtctgg tcatggatgg cttcgaacaa gttatgaaga
     9241 aaggtgcgat cgccagcgag ccgtgtacca aagtccgtgt gcgattgact gactgtaagt
     9301 tgcacgaaga tgcgatccac cgcggtccgt cacaaatgta cccggcagtg agagaaggta
     9361 tccgtatggc aatttcagac gcaaaaccat cccttttgga accgattcaa atcatgcaga
     9421 ttgaagcccc agcagagttt cttggtgaag tctcaaaact gatccagaac aagcgtgggc
     9481 aactgttaag catggaacag gaagggataa tgaccactgt acgcgcagcg ttgccagttg
     9541 cagaaatctt tggctggtct tcagagctac gaagtgcaac atctggaaga ggctcaagct
     9601 ttattattga tcaacgcttt gagaaagtgc ctgaagggtt gcaacagaaa gtaacgcaac
     9661 agattcgtca gcgtaaagga ttaaaagaag aatctattta acgaagcgtg aatgtttctt
     9721 ttttctttgc aataaaggac agcgtcacaa agaacatgac gaaaagaata ccaaatccta
     9781 ttttagactg cgtgtcaaag taaacccacg tgctgataaa cgacgtgatc gttgctccta
     9841 ggaataaacc tatgatgacg ctgtcttctg cagtgataaa gaacgctgca atgagaacaa
     9901 gcaggttgag gataacaata aagacgtact tgtttccgtc atactgcctc ttatcaattt
     9961 caaatgcatc ctgtgctgct cgttgttctt gcatgcacgt ttcattctca atgtataccg
    10021 gcgcatcagc ttttccttca ggatacgaac aacttcgata ctcattataa tacgaatgac
    10081 ttccagcgta tttggggaag aacacatttg ctcccatgaa gactagagag atgtagagga
    10141 ggataaccac gagtgaaaga ataattttat tccagcgcat acgaataaaa aaatgaaaga
    10201 attatttaag actaccggta gccagttgtc ccaggtacac agattttgtt aactttcttt
    10261 tctttgccaa tttctcaagc agcgcatcaa tcttgctccc atactgtgca gcatacttct
    10321 ttctaaacgc aaactctttt ttcagaccaa gatttactgc agcttctcgg agaacatact
    10381 ttcggtgttc attttttatt tttaaaagag gatcaatctt catgccatat gcaatcaggt
    10441 ctttatccat aaacggcagt cggacttctt tcccaaagtg cgcagcaatg gcaatgtctc
    10501 gtgtaatatc ccgttcccag atatggatca tcccgtccca gcaagcggca ttgatgtcgc
    10561 ctttgtgtcg ttcataccca gcaaatattt cttcggagcc gaggccagtg agcaccacgt
    10621 cttcgtctgc catcgacatg acagtataca ttacagcacc aaccccaacg gtaacaggat
    10681 catgcttctt agtaatacga ataacctctt tgaaaatatt ctccagttct tcctctttca
    10741 aaattttttt cttcaatggc cacccgtacg cgtgtgcaac agcgtcagca gcgtcaagat
    10801 ctttgcttcc ttctaatcct acggtgtaca gggtaaatgt tttttccagg cgtgtgcaga
    10861 ggaatgccaa cagcgttgag tcaacgccac cagagaacgc aattgcaatt ggcacatcaa
    10921 cgcgtttttc aaccgcatca atcaagagcc ctgagagtgt ttcaatggca ttctcatgaa
    10981 cagtttcatc gcttcgcaac tcttggagcg caaatggcag gtcttcgttc agttccatat
    11041 aattatgaga aaaaataagg gtttaaatac ataatgctgc gggtggttat ccactccaag
    11101 ccgaatcata aaaaataaaa aagggttgtt taaggattat gcctcaaaga attagaatcg
    11161 ttttttcttt gcgtagcatt ctctgcagta aactggtttt ccttcttgtg gtttgaatgg
    11221 aacttcacat tctttaccac attcagagca aaccgctttg tgcatttcac gaggtccaaa
    11281 atctcttctg aaaccaccgt cactgccact gcctcggtta aaatctctca tcgttacttt
    11341 cctccgggtt tatacattaa ggagacctat aggtctcatt atgttgccct aaaggaatta
    11401 gaactcattt aaaaagcttc ctacttaagt tttgaagaat tttctgaaaa atccgcaagg
    11461 tttataatca gtattggtag atggagaggc atggaatata ctaccacaac gcattttgcg
    11521 aggtatttcg acctttttac caaggcagaa gaactgttag taactaggga tagaccgcag
    11581 tttgggctag ttattggcgc aggcgcggga aaagatgctc tttttcagtg tgcaggacct
    11641 tattgggggt ttccaccaga acaaatgttt tcctgggaac cagtagaact tttggtggct
    11701 cttcgtcatg cgcataaaga atctcaggta accgttattg atccctctcc caagattgcg
    11761 caatgccttg cagggcagaa ggtagtccct gtgtcagatt tctgggggac accaacatca
    11821 tatgtcttac gtttttgtgc gacgctccat tctgtgaaag cacgtgaaga aatgctcgag
    11881 tatctgaata caaacttaaa gagaaaagga atagcaaacc gtgtgcatat gcttgcacgt
    11941 gccctgtgcc caccaccagt gtataggcaa gaagattttc ttcaagcaga gttagatgtt
    12001 cagtacgatg ttgtcacagc attatcttca gtaagatatc ttgcaccaag cgatgatgtc
    12061 tatacaaagg ttgcggaagc tgttgcaccg aatggtcttc ttctcgtgtc tgacggggag
    12121 aatggagagc cgcgtcggtt tgaaaattgt ggtttagaac gagtatttct tgaagagttt
    12181 accctccctt atctagaata ttgctaccac gcaattttta gaaaacgtta atggcgtgct
    12241 ttttcgagag tccatgtcgt agtaaacaac tcaccatttc tgtataggtc ttcttttgta
    12301 attactttat tctcctctgg attaacaacg atcgacaata attgataaac atttatttcg
    12361 tcaccagtac tagtaggttt gttttgaatg aatacccata gtgtttcttc cccatctggg
    12421 tctcctggaa acgacgcgtt gtaggaattc aaagtagaga gaatatcaga aacaaagaaa
    12481 aagtcacggt tttctatgac tggccgaaat tgtttttcga cataggcacg gatatgtttc
    12541 tcttcttctc tatacggata aatgacatct tcttcaatac ctatttcagg agtgggcgca
    12601 acgttttctg gagcaacaac tacagcaatt tctttttttt cttctgtcat tggttttcca
    12661 agaagctctt caagcgttgg gagttgcgtt tcttttgtga cggggctttc tccaccaaaa
    12721 gcatcatcaa attttgtagg atagagatat ttgagggcag agtgcgcgtt catattgagc
    12781 aggcgttctt ttctaaggag cgggaaaagg attttggttg cttcttcctt cgattgcgtt
    12841 ttgacaagga gcgcaatgcg taccgcagtc ataagttctt tatctaaatc atgattccta
    12901 gtgtttacta ttgtatactt ttctaatgta cctgtgggaa tggatgcccg aagaagttcc
    12961 cgtcctaaaa tagtctctaa gggataaaca ttaacgaaat ctttcccgaa gacgtcttgg
    13021 gataggtaat ccgcgatcat gactcttcgt cgtgtaacat cacggagata ttctccataa
    13081 gcgtcgtaat gcattgcagt atagtgttca agaaatatat attcctctgc aaacgcagtc
    13141 cgttcttcaa agatagttga aaaattttgt tccatatttt tatttttcgc atgttgtgct
    13201 tcatgaacaa atgttgcaag aagcctcgca gtgacatttt gtttctcgca ggaggaaacg
    13261 ttgaccatat tatccttaaa agttccacgg acggatgaca gcgtttctcc tgtttgtaag
    13321 agaactttag gattaaacgt aatccactcg acattttctc ggagtaaatc tccccatggc
    13381 ccgagtcgta ctgcaatctg ctcaaagata ggagattttt tgttcaagat aacaggatca
    13441 tctgtgtaaa gcagaaattt atcaagagaa atctctgcgc catcaagcgt gtaggcggcg
    13501 ttttcaaacc ccaagaagag ttctgagata tcattattct ccattcggtg cacaagctca
    13561 aactgcttac cttctcttct ataaatatta gtatcaattt ctaatccttc taagagcatg
    13621 cttgtggagt aatcagaaaa atcagatgac ctttcttcag caatagtttc ttttgagaat
    13681 ggcaacaaca gtgttgcaac aattgggaag gacatgaagg aacgtttata gggccccata
    13741 ggcagtatca ttttcagctt atgattcttt ataaaccttc ctaccagaac atttataagg
    13801 aaactattat ttattatttg aaatcatgaa tgaagaatat cctaggaaaa tttatttttc
    13861 ttctctgcgt aaggaagggg tttctctatc ttttatttgt gcagtactct ccgtaggcgt
    13921 gttgggtgaa ggatatgtac gcaatcttcc acggcgagca gaagttgcac caagtgtctt
    13981 ctcagtacca gtaccaccag agatagttcc tacaatagaa acgcaaccgt ctcaaatgtt
    14041 tttcgatgaa caaatagtag agaagaccct tctcaaagac ggagacccca atattgttgt
    14101 ttattattca gacttcgtga acggtgataa aaaatttaac ctaaaacttt ctgagtacgt
    14161 aaagtataag gtaaaggacc atatccaatg ggctgcagga gccatccctg ggcggtatct
    14221 tccatatatc acctatcaag atccgacgat tgaagaaatt gcagcagaaa tcacaacagg
    14281 aagcacaagc aaggaagaag aagcgcgccg gattttaaat tttgtgcatc aacaatttta
    14341 tgatatttct ctcgaaaaca gtccgcaatt tgattacgta aaatatcctt tggagacact
    14401 tgtggaaaaa aacggcgatt gtgaagatat ttctattctt gggttgagtc ttctgaaagc
    14461 acgaggcatc aatgtagcat acttcatcta taaacctcaa aaagatgaaa taatgggaca
    14521 ttttgcaatg ggcattgccg gtgatttcac tggtacgtca tttgagcaag acggtgttaa
    14581 gtatttctat gtagagccaa cagggacaga catgctaagc aacatgtcta agtttgatat
    14641 aggacaagta agagacgagt acaaagatag tgttcctaaa attgttgtcg tgaagtaagt
    14701 ttatataacc taattcctta atattctgta ttccttcgta cacaccgaaa tggttgccgc
    14761 ttgtacaagt acaaacgata gatgcaattc tttaggaatg gggagaagaa taaaacttgc
    14821 caattagtat tctaaaagca atagagcaga tcatcacata agactcagta ataggaacat
    14881 ttcttatcaa tacgttccag ttctattcct attgtgtgta tatcggaacc atcgtatact
    14941 tcgctctttc tcggcagaca aaagaatatc tgaaaaatga cgaacaataa gttcaaaccg
    15001 aaacgtatat aaacagtcca gatttttgga agaaggttat ggcaagtgtg tacgataacg
    15061 atccaacaga gctcctgcaa aaggcagcac aggaattaaa aaagaataaa ggaacgcaga
    15121 ttccaaactg ggcaaaagta gtcaagactg gcgtagggca agaacgacct ccggagaatc
    15181 cggactggtg gtacatacgc gtagcatctg tgttaagaaa aatttacctt cgtggtccaa
    15241 ttggagtttc aaaacttaga accttttatg gacgaaaaaa gaaccgaggt gtccgaccag
    15301 aagaatttcg caaagggtca ggtaagatta tcagagtaat ccttcaacag ttagaaacag
    15361 cagggttggt taagcaagca cagaaaggag cgcacaaagg tcgcgtggta acacccaagg
    15421 gccaatcctt tttagacacg atcatacgac gccatggatc tcgaagaaat caaaaaacag
    15481 aagctccagt cgcttcagca ggaaatgctg cagcaacaat tccaggagca gcatcagctc
    15541 cagcagcaga ttgaacaact ggaaggagtg gtcaaaagcc acctcagtcc tgaagcagtt
    15601 gcacgctatt ggacgctgaa agcagcacat cctgagaaag ggattcagtc cttggtgctc
    15661 atctctgagc tccttcaggc agggcgtttg aagggaccaa ttactgatga acaatacaaa
    15721 gcgctgttag agcgcctaag tccgcaacaa cgagaaacaa aaatcacacg aaaatgagca
    15781 gattcattca tccggcaaaa aagacacgct tagcaaagaa agggcgacag acccgctggg
    15841 caccgttctg gacaattccg cgaacctttg gaaaaggaag acgcgtgcac ccaggtcggt
    15901 tgacgcatat caagagaaac tggagacgaa ataaaactaa agcataacat ggaacgaaca
    15961 tatatcatcc cgttgcgaag agaatggctg aaagtacctc tgtacaagcg tacagcaaaa
    16021 gcagtcaggg caacccgcgc ttttttgcag cgccatatga agcttgagcg agtgaagctt
    16081 ggtcggatgc tcaatatgaa tctttggacg aatgggaaca gaaacccacc gcataaagtt
    16141 gaagtctctg ctgaagtaat gaaagacgat gaaggtgatt atgtgtatgc agaagttgtg
    16201 ggtgtggcaa aggaaccatt aaaactcatc gcggaaaaga agaaagtggc agaaaaaacg
    16261 gaagaagtga aagacaagtc aacagaagaa aaggcagaaa aagaaaaagt attgaaagaa
    16321 gtgcctttca atcaagaaca gccagcaccg attgcagaag aacatcacaa gcatcataat
    16381 aaagaagaag cagaaaaaga tcgcgggaaa tatatctaca cgaaagagac gcggaaagaa
    16441 cggtagaaaa taataagctt ttgaaaagat ttcctaacta aacttttgcg tttttgcttt
    16501 gtttagaaac cgcaattctt taaaattcaa gggttatagg ctttatatag ccaaatctta
    16561 gattttgtaa ggagaggtga ttactattaa ttttattttt agggttttat ttcttctgta
    16621 agcgctaaat cttccagtgc tttctgttga tatgttcgga gttcttggat tgtttttgga
    16681 gtgtgctgga tgatgtatgt gatgccagtg atgccatatg catcgataat cggtccaaca
    16741 atctgaaagc ctccttcata aaagaatttt ttttggtgtt ttatcatcgt ttcaaagtct
    16801 aggaaatggt caacaggata atatttgata gtatcatctt tcatttttct ttcaaagtat
    16861 tctgctgtgc cttctgcaag gacttttaaa caaatctctt ctcttactgt gatctcagta
    16921 gaaaatccag gccaattgtt tccggtgaga tgttctgaaa ggctgtccat gtaaaaatgt
    16981 cccagctcgt ggtgtgttgc gcgttctaga tcatacatga tctccgaggg gtaggcgagt
    17041 tttatgaaaa agttgaccat agtcggtttt ggtgttatag caaaactttc cacaaaagag
    17101 atggtattgt tttcttcttc atattcgcca aaatggctag gatgttttat ttcctctatt
    17161 ggtaggaatt ctacatgcgg cacgccaaaa tgttcaatat gaagctcatc ttcttgcgcc
    17221 ttgataaaat agagaaggtt ttttcgtacg taagtttccg aagcttttct tgcgtgagtt
    17281 tcaacgccct tgtaaaataa tgtggttatc aagatggtaa ttcccgctgt cgcagtatac
    17341 cacaatgcac tatggatgaa ttctctcagg ttcatatgtt ggagcagaga ggtattggct
    17401 tataagtatt cctgacttat ataggagagt tgtttctagt agacttttaa tttcttatcg
    17461 ttgaaatatt ctgcacagtt atccatgcag acatcatgcc gtaccccttt ttatttatgt
    17521 taaacggcgt tattgatgta acatctttta agaaaataag cgtgcagaac tttttatcac
    17581 atactttatt tgcatatgat gcatcgacgc caatctgctt tccatattct ttcaatatgt
    17641 gctttatttt atctttattt aggtcctcaa aaaagagtgt tttttccact cgcgcttttg
    17701 caattatggg acatccagat tctttaaaat aaatattgtc atctttatga atattcttgt
    17761 acggtgttct tctttgtgtg taccatctgg attctactta tttttccccg gatataatct
    17821 tttccagtat ccatctttta tttaatattg caatgtggtc catgttattt taactcattt
    17881 gacaaaattt tttatagttt tatctcaggg atataagcaa gcacaattag tgtacaagaa
    17941 caattacagt aactctctct ttaaaatctt atgcgcatta tttatttctt tgaatatttc
    18001 aagattgcct tccggcatat ctggatgatg tttctttgcc aattctttgt atttcttatc
    18061 aatctcattc atatcaagaa catcctgccc aaccccgagt ctctctcgtg cctctttacg
    18121 catatgttca acatcatcct tttctgtgaa gtttaagaga aattcctcaa atgttttttc
    18181 tcctgcgatg agatctgcta tttcaagctc tattacttta tagacaacat ataaattatc
    18241 aacatatttt tgagcagatt tatagctata atacatgcga tagccatcac agtaccacgt
    18301 tgcagacgca ggagtatttt ttatcgcaac tggttcaaga tcaatattga tgtcatcact
    18361 tgttaaacct attttaccga gagtatagat tatcttattt ttatattgta atgctcgtct
    18421 gtcaaaagag tctcgtatag gcagagcatt gaattcgtgt ccttttatgc ttagagtttc
    18481 cattgtttaa aaacaaaata tttatgtttt gtatatatct tagaaaaata atggtttata
    18541 aaccttggca taagaaaatt tagtatagtt ggagttggga agcgaggata ttaacaatgg
    18601 atttgttggt gatatattag aaaaaataaa aaataatcag ccagctatgt agccgtgcat
    18661 gaaccctgct tcgaatatat caattgcatc attttcaagc aaggaaaaaa tgccatcctc
    18721 gtcatatacg ctcagatagt cttctttgtc atacacgctc agatagtctt cttcccaatc
    18781 ttctttgttc tccataatcc ttacctccgt cgctccaaag ggagttgcat caattgttgg
    18841 ctcaatacgt ctgcgatata cacatggtcc agatggtttt cagcgcttcc gctacgttgc
    18901 acgatttcac ctcctcatga acataacgaa atgtattaac gaagagttgt ttataaacgt
    18961 ggcgcggggg cgtgtccgct gtccgacttc taagaaatat atgttacaga agatataaaa
    19021 ctcctgattc gcaattcatt taaaggttta tctcttatta tttttttatg tcttatgaca
    19081 acatagccct gtttgacctt gatggaacgc ttgtggactt tgatactgcg atgttccgcg
    19141 atctttatgc tattgcatct cctgaagatc cgtatatttc tgatatatcg tttccatatc
    19201 cagagtatat caaaaaccgt cgtgcaatga ttatgcggca gcctggctgg tggcgtacat
    19261 tagatgaact tgctgttggg tttgacgtcc tttgtgcctg ccttgatatt gggtttgata
    19321 ttcacgtgct taccaaaggt cctaagaaaa atcctaatgc ggcaaaagaa aaaattgaat
    19381 ggtttgagcg acatgttctt cccgttgcgc cagatgcaaa aattacaatc tctggtgaca
    19441 aagggcttgt ttatggaaag gtcttggtcg atgactggcc gtcctacgtg gaaggctggc
    19501 tggagcacag ggttagaggt cttgttgtaa tgccttggca ttcatataat gcttctgtga
    19561 aacacccaaa tgtaattcac tataatggaa cgaatatttc agacgtccgg acacgattgg
    19621 aagaagcgta tgcacgacag cctaaacaat aactctcatt acttcacaaa taaatgtggt
    19681 acaatcgttc cattcttgtc ctttgaatcc cgtgcctcga gatagtgatt ttctttgagg
    19741 cttgcaacct ttcttcggaa cgttcgctct gacttatcaa acagttcttt gtataattca
    19801 tagatctcgg tgctcggtag tccttggtgt tcttttacaa tctctaatac ttcctgctct
    19861 tcctcgtcca ataccttact gcttttcaag aatgaagaaa gttttccaac tgcaatatcc
    19921 acatcacgct tttgtatctt tcgtgatgca cggttctctg ccgcgttccc agattctcgt
    19981 aataaaaaga gtcctattct aaggtctttc ccatctgcag ttttttcgac aataggcata
    20041 aactcttcat cgctccatac attgtcataa aaccccgtct cttttcgttc ctgaagaatt
    20101 gcttccgttt ccttgtatgt gtacggttca aattctagga tctcagggag taaccgtgac
    20161 cgtgttcgtt gatcaaggaa cgcaagaaaa tctttgctat tggaaatcat aatgatgcat
    20221 ttcttgtaga ggtcttccac caactggtag atcacctgct cttctttgag cttatccact
    20281 tcatcgagca cgattactgc tgctttcttg ttgagaatct ttgcaatctc gtccataagt
    20341 tcatttgttt ttttgttctg cacccatttg tagccgagct gcatgcaaat gtctacgagc
    20401 accttgtatg ctgtgtcttg tttccagcag tttatgtaga tgctaacaat cttgtccgag
    20461 tgctgctcca tatccctaag cacgtggcgg caggcagctg tttttcctat acctggtttt
    20521 ccggtgatga gaatgtttga gcccatgcgg ttcgcgaaga gtggcttgat tatggtagca
    20581 atgtgctgct gctggctttc ccgaaatttt aaaatatgtg gaaggtattc gtagtctagg
    20641 acaatctcat tcttgaataa ggtttcgtta tgctggagca cgttgttaaa aagattcatg
    20701 tattgctaga gaaaatactc ttttaaaagg tttgttgtac aaaagatgga ggttttttac
    20761 gccccctaga aataattaag tcacgggaag tccgctttcc gtaggtattt cagaatgcga
    20821 aaagatattt aaggtttcag atgcacatat acatatacaa taaaactaat aaatagataa
    20881 tcttttgtag aaaatatgaa agcgtatgtc gccttaaagg atatttcact agataatgat
    20941 aatggggaat catattggat tcctgcagga accgtttatt ttccagaaaa tggaataaaa
    21001 cttaaaaaag gggactgcaa atattttcta gaagaggaat tcttatacat gaaacgagtg
    21061 tccaattgtg tacaaagtcc taaagtgaaa attgtagata ttccagatgc gatggtgcag
    21121 ttgttgctat accatggaga gcaaattacg aacgaagaaa aaaaattcaa taatttacgt
    21181 gcagatttat atgagctgat tcgaaataat cttgacggca ttctttagtc cttcgataag
    21241 atagaagctt gtttttgtgg aaaccacgtg gcagtgtttc tgttgcactt gattttcatg
    21301 agaagaaaac ataattctaa gacaattttt taaatttctt taacttcaga atctgctgcg
    21361 acaataaagc gcataccgac gccgagttgg attagtgcgg acaatagtgc catgtgttcc
    21421 tttccagagc cggaaataaa gtttacgcct acttcagtcg acactttttc ttttagccct
    21481 tccaggattg cgttcttcat tgcttccatg cctttattta catcaactag aatgcatcga
    21541 acttccttct ctgttgtaaa cttttctttt ccgaagtcgt tagtaactaa gaaaatgttg
    21601 ccccagttgt aattgttaat cagcttggca acttctgccc atgttccttt tcctgtgctt
    21661 aagcaacata cgaggtctgt catatgaagg gtatactatc aaataaatat atataaagat
    21721 ttggcgagtg gaatatatag ctattgaccc acaataaagt ttttaacctc ccgtttgctt
    21781 cttatgttct atggttgaag ataccgtcac ctacgtctgt acaatgtgtc gcttccgttt
    21841 caggcgcggg gcaaaatgga gtcatccgct ctgtccaaac tgtggcaaag aatggtgcta
    21901 tgagcgtgaa gatactgtga acaagctgat taatgagagt ctataatctt tccgcgctgc
    21961 cagtccttca ggatcatccg tgccattgcg ttgagatcga gcacgccacc cttcgctcgc
    22021 ttgtggtagc gttctgcgat agattctaat actttttctt ggtcgtcttc aggtactttg
    22081 taatacttgc acattatttt cttgtgttgc ttgattagtt cgagaacaac aaggtctgcg
    22141 tctttcactt ttgtaaaatc ttctgctcca atcatagcaa gtttcacttt atctttttcc
    22201 atgtaaggca ggacgcccgg cgtgtcataa atcataatgt tttctgagat acgaatgtat
    22261 tgtttgcctt tggtaaaccc agacgcagat gaggttggcg cgacgtgcct gcctcgcaat
    22321 gcgttgatca acgaactttt tcctgtatta gggtagccaa ccactccaat cctgactttt
    22381 tctcctcgag caacttctaa aatttttgtt ctcaacatgc ctgtgccgag acgttttgtc
    22441 gccgagatga aaacggcgtt gcgatgtttt cgtttccatt ttatcagctc agacttttgt
    22501 gcgaggtctg ccttgttcag cacgtagatg actggctttg ttcccgcttt ttctttgatc
    22561 tcttgattat aggtaagctc agggaagcgc gcgtccatca ctaaaagaat aatgtcgcac
    22621 tcgtggatga ctttgttgac gatttcccag aagtttttca tacctctttg ttaattcgtg
    22681 aggttattaa agctttcttc catttggaaa atcttatata ttttcaatat cttgttctac
    22741 aggatgagag aagaggttat tgatgttctt gaagagatga aagcgaagaa atgtattctt
    22801 tttaactgtt ttcatcagta aagtcttcat cttcgttatt gagaagtatg ttcttttggt
    22861 cttttttttc tctgaaagac cttggaacgt atactttttc tttggttaaa ggattttctt
    22921 ctgtgtagta cattgcagta gatgctgtcc ctggtgtcgg ggtgaaaact tgtgtaaggt
    22981 tgacgtagat ttctttcttg ttacagtatt ctttgagctt tcccatatct tttttagttg
    23041 ttccgggatg tcctgctatg aaatagggaa cgaggttttt gtttgtgttt tgttctttgt
    23101 tgacttgttt gtatagtttg aggaattctt caaaggctcc aggattagat ttattcatct
    23161 gcttgaggac ttcagttgag gtatgttctg gtgcgatttt gaggcgattg gtgaacttca
    23221 taatatttct aaagagttct tgttggtcta gaataatatc gtgacggatt gcgcttcgta
    23281 attctagttc ttttcctttg tgcttctttt ggagtttttc tactccttct aagagtggga
    23341 ctaaatcatc actgagtttt ctgtacttgc atccgacgca ttgttggttg cagtattttg
    23401 ttttgttgta gactactact gctttttctg taatcagaga agggattttt tcttcttcgt
    23461 cataaagaga acaataggaa ccgtacatgt ttaaagttgg gagggtgaaa tcattgatta
    23521 aggtgtttcc ttccatgtag agcttttcta cttctttgag aatactttct ttgcttcgct
    23581 ttgcgacttc ttttccttgt actaaaggaa tgacacaaaa gttacaagaa ccccagcagc
    23641 ctcttccaat aatgacagaa gttttgaggc gtccaagcat tcctttttgc atattcagat
    23701 tttttgttgt tggatgtagt tctcttgtca atggaagttc atagatgaga tccagttctt
    23761 tttctgtgag tatatgagaa gacctattgt gttgaataaa gcctagacca cagggttcaa
    23821 taaaagctgc ttcaggaaga aggtagtgca ttctcgtgag taagttgagt ttatttttat
    23881 ctgtgatgca gtcttcatag cttggaagtt ttcgtatctt gggattgatt tcttctttct
    23941 tgattcgaaa tgcgattcca ttgagcgaag ctaagtctaa cccttcgcgt actttttcaa
    24001 agtcagagcc tttttcgttt attgtgcatt tttctatttt tttgagaagg ttgagaatag
    24061 ttctttctcc attgccaaag atgagaatat ctgcctttgt gtcgttgaga attcctcttc
    24121 ttagtgcatt tgttcgataa tcaaaatggg tgaatcttcg caaagttgct tcaacaccac
    24181 caagcactgt catgcaacca gaataaaatt gtttgagctt ctgtgtgtat accatcaatg
    24241 ctctttccgg gacaagcacg ttctctcgtt ttctgagcat aggtgtgtaa tttgccagca
    24301 tagaatcgag taagccagaa gtaatgcaaa agaagtattt tggtctgcca cagacttggt
    24361 agtcttgatc acttagtggt tgtgggatga ttgcaacttt gtagcctttt ttgtcgagaa
    24421 gtcgtgcaat aagtgcaaga ccgtttagtg gatggtcata gtaggggtct ccagtaacaa
    24481 agacaatatc gaagctgtgg aaatctctgt agtatttcct tccttcgttc catgtggtcg
    24541 ggaggaagtc cctttgcata gctttttagc caaacttgga gtttataaac cagtgtattt
    24601 tattccttac tcaaagagta gagagaatgt agttgagaac ttctcgtact gcaggaatat
    24661 aggtgatttc tccgagcttt tctaagggaa taaagcgaaa tcttcaagga tatct
//
LOCUS       DATDZU010000054         7030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_261476, whole genome shotgun sequence.
ACCESSION   DATDZU010000054 DATDZU010000000
VERSION     DATDZU010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7030
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261476"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..647)
                     /locus_tag="VJJ79_01835"
     CDS             complement(69..647)
                     /locus_tag="VJJ79_01835"
                     /inference="COORDINATES: protein motif:HMM:NF013202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22490.1"
                     /translation="MAKKVITQKARISVIKKRWYSLQAPNLFGNVVFGETIAAEPETL
                     KGRGVRTNLSTILRGSKRQEVELYFKITEVKGSECHTEFVSMEILPPHVRRIVKRAKK
                     RMDDSFVVQTKDNVAVRLKPLLLVRENVQHSVLTSLRKQTQIFFTRVAKDTEFSEFVT
                     KIITGELLRDLRGDVKKVYPVAAAEMRMLVRE"
     gene            complement(650..1105)
                     /locus_tag="VJJ79_01840"
     CDS             complement(650..1105)
                     /locus_tag="VJJ79_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013798557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HLC22491.1"
                     /translation="MARMYSSSKGKAGSHKPSVKTVPSWVGYKPKEVEQIIVKLAKQE
                     KGASEIGMILRDTYGIPCVKVLLSKRITDVMKEKNVSRKLPEDLIALITRHIQIMKHL
                     EENHDDMVAKRGMQLTESRIHRLVKYYKTKKVLASEWTYNKQNAKLYLE"
     gene            complement(1196..1528)
                     /locus_tag="VJJ79_01845"
     CDS             complement(1196..1528)
                     /locus_tag="VJJ79_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22492.1"
                     /translation="MTKYCLAIGTDVVDREPSKYLTRQGFMRNNDDFLYPLVRDANGS
                     VVVSKDIDTLEAVALEYFREHTDVTVLVAREYFRAARLFEIPFSGRHLVSNDIVAIYL
                     PGDEPKAL"
     gene            complement(1531..2241)
                     /locus_tag="VJJ79_01850"
     CDS             complement(1531..2241)
                     /locus_tag="VJJ79_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22493.1"
                     /translation="MNRVLVAAPICQWYDHCWDAFSSRLKELTYPHKDIFFVDNSEGL
                     TFFKKVKAQGFAVRKTPHLWRIRDMVIRDHNIIRDKMLDGGYDYLLILDQDVVPPKDV
                     IEQLMRHDKDVVSALYFGHHDIGGEVRVMPFAWVFSKEEGDWNNTGYFLDSEIWEPQL
                     LRIAFAGMGCILIKRSVLEKIKFHYSHDMDAWDDRWLGVDVWANGFEFYLDNTVKCQH
                     LYKNRTFDYHSLKKEGRN"
     gene            complement(2285..2968)
                     /locus_tag="VJJ79_01855"
     CDS             complement(2285..2968)
                     /locus_tag="VJJ79_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22494.1"
                     /translation="MSNLYLVGTCHIDPKGPERLQKFLTYVRPDVITIEIDEERAASA
                     RQYHAYAALSLLQNESRYRSFLGDTFFDIFKNISLIYGYEVWASEEYVREHPEVRCSF
                     VDKRDASKIIKDSAFGGIENFVKEIMPTSLSDCNTFQDWIDAIYKDPSRLIEILRMGN
                     PSLFHEVIHNGEILMEGGIRAAYSTAEHACIHVGGVGHIIGDNYNLYNRLQDCHPHRV
                     TLPELDKFS"
     gene            complement(3019..3087)
                     /locus_tag="VJJ79_01860"
     tRNA            complement(3019..3087)
                     /locus_tag="VJJ79_01860"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3055..3057),aa:Gln,seq:ttg)
     gene            complement(3142..3816)
                     /locus_tag="VJJ79_01865"
     CDS             complement(3142..3816)
                     /locus_tag="VJJ79_01865"
                     /inference="COORDINATES: protein motif:HMM:NF025881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LAGLIDADG family homing endonuclease"
                     /protein_id="HLC22495.1"
                     /translation="MHSSVYELIGAIYGDGHIHSTENRITLVGSLEDYYYYTFYLKPI
                     IEKIFPSVKVCIRRRNDRNSYYLSFESKDAFQKLQSFNLWRGAKDNLVLPFLPNSRSL
                     KLFLRGLFDTDGSLKFSKQTRKINYYPRIQYAFKESQFSQNLGILLSRAGFIYCCWYD
                     KRDKEYYYQISGENSLHRWVKTIGFSNPVHYSKYLYWRKFGYCIPKSTLSFRTGALNL
                     KIEALL"
     gene            complement(3873..4628)
                     /locus_tag="VJJ79_01870"
     CDS             complement(3873..4628)
                     /locus_tag="VJJ79_01870"
                     /inference="COORDINATES: protein motif:HMM:NF018758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22496.1"
                     /translation="MFLEEIKNKKEFRGLSDAFVSRVLLLCSTNYDVTKEKEKKMLVK
                     EARAKLRELYSAYQLPGYSRKENYLKNMEHWGDKAVARRILSLHMSTKERVPYYDPLY
                     AKLRKNVPFKTVLDLGCGLNVFSLPWMGYVAYYGIDVNKDDVDFCNTYLQKFGLQGGV
                     RWGDILSVESFVHTDICFMFKMLESLEALERGSTAKLLERITSPYIIASFATRSLGGG
                     KVISAKRLKWFKELVPHAEQFTLGSEVYFLIKK"
     gene            complement(4653..5198)
                     /locus_tag="VJJ79_01875"
     CDS             complement(4653..5198)
                     /locus_tag="VJJ79_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013296187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HLC22497.1"
                     /translation="MERQELKIPIERVAVLIGTKGAVKKHLEKRLQIHIEVDSKEGDV
                     LVEGEDSVTVYETTQVIKAIGRGFHPDVAQRLLDKEYMMELLNVQEYIGNSKKHMRRV
                     KGRVIGREGRAREMIEDMTDTSISVYGKTVGIIGRIEWVSVARQAMEMLLQGAPHGNV
                     YKWLERKKRDMMRREFEEKDL"
     gene            complement(5180..5866)
                     /locus_tag="VJJ79_01880"
     CDS             complement(5180..5866)
                     /locus_tag="VJJ79_01880"
                     /inference="COORDINATES: protein motif:HMM:NF013341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIO1 family regulatory kinase/ATPase"
                     /protein_id="HLC22498.1"
                     /translation="MSKKKFIAYENVFDESTLRALFKLSGQGYFDRIEGPVSIGKESN
                     VFTAIYGDERRIIKIYRTGANFKKMYDYLRPDPRFSHVKGSKLTIIFTWAKKEFRNLL
                     RAHDHDVSAPMPYAVHKNVLVMEYFPASILLYAPPKRPKVFYEKLIKEIIKLRESGLV
                     HADISEYNILNHKEKPVLIDFSHAVDIRYPNVERLLQRDVENLVRYFKKQGLSLDLKK
                     EFERLWKDKN"
     gene            complement(5903..6250)
                     /locus_tag="VJJ79_01885"
     CDS             complement(5903..6250)
                     /locus_tag="VJJ79_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011012728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor eIF-1A"
                     /protein_id="HLC22499.1"
                     /translation="MNKKKEEVLRQEQEAMEIQRVKLPRGKQSIGVVEMRLGGGRMRV
                     RCYDGHVRVCRIPGALKRRLWVRENDVVLVEPWEYGGEEKGDVIYKYRASQVQWLRRR
                     GLIKEVTVDLEEF"
     gene            complement(6342..6683)
                     /locus_tag="VJJ79_01890"
     CDS             complement(6342..6683)
                     /locus_tag="VJJ79_01890"
                     /inference="COORDINATES: protein motif:HMM:NF016842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NMD3-related protein"
                     /protein_id="HLC22500.1"
                     /translation="MPKSIFLSNNKYFEAVIQLRPYNNEVYLFIEHEIKSRKGVFISK
                     IEELKTGIDIYISSQRFARSTLGPKLKRKFKDGELKITRKMHTQDRMTSKKLYRATIL
                     FRMPKDEEEAI"
     gene            complement(6658..6942)
                     /locus_tag="VJJ79_01895"
     CDS             complement(6658..6942)
                     /locus_tag="VJJ79_01895"
                     /inference="COORDINATES: protein motif:HMM:NF016157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF424 family protein"
                     /protein_id="HLC22501.1"
                     /translation="MIYVKVHESAIAVCDAELVGKHFEQGKFVLDVSELFYKGELTNS
                     AEVKEILCEGNNLNLVGKKVIALALEENVIREKDILMIDGVPHAQVYFLI"
BASE COUNT         2063 a         1618 c         1224 g         2125 t
ORIGIN      
        1 gattatctgc aaagtcactc ggaacgctaa atgtataggt cacaagatac aagtgatatg
       61 tcataaagtc actctcgtac gagcatacgc atttctgcag cagcaacagg atatactttc
      121 ttcacgtcgc cgcgtaaatc acgcaagagc tcgccggtaa taatctttgt gacaaattca
      181 gagaactccg tatcctttgc aacacgtgta aaaaaaattt gtgtttgctt tcggagagag
      241 gtaagaacgc tatgttgcac attttcgcgc acgagcagca acggttttaa tcggacagca
      301 acattatctt ttgtctggac aacaaatgaa tcatccatcc ttttctttgc acgcttcacg
      361 attcgtcgta catgtggcgg caggatttcc atgctcacaa attccgtgtg acattcgctt
      421 cctttgactt cagtgatctt gaaatacaat tctacttctt gtcgttttga tcctcgaaga
      481 attgtagata agttagtgcg gacgcccctt cctttgagcg tctcaggttc tgctgcaata
      541 gtttcaccaa agacaacatt tccaaagaga ttcggtgctt gcaaggagta ccatcgcttc
      601 ttgataacag atatccgtgc tttttgggta ataacttttt ttgccatttt tattcaagat
      661 aaagttttgc gttttgttta ttgtacgtcc actctgacgc taatactttt ttagttttgt
      721 agtacttcac gagacgatgg atgcgagatt cagtcagctg catgcccctt tttgcaacca
      781 tatcgtcatg attttcttca agatgtttca tgatctgaat gtgacgagta atgagcgcaa
      841 tgagatcttc tggcaatttt ctggatacat tcttttcttt catgacgtcc gtgatacgct
      901 tgctcagcaa cactttcacg cagggaatcc cgtaagtgtc tcgaagaatc atgccaattt
      961 cacttgcacc tttttcttgt ttcgcgagct tcacgataat ttgttctact tcttttggct
     1021 tgtagccgac ccatgaagga actgtcttca cgctaggttt atggctgcca gcttttcctt
     1081 tgctacttga atacatccgt gccattgttg tgaaaatgcc tggagaatag ttctccggta
     1141 tagccttgct tgcacaatgc taccctgcac tgtgaatggg aaagaaagta gggatttata
     1201 aggcttttgg ctcgtctccg ggaagatata tggcaacgat atcattcgac acaagatgcc
     1261 tcccactaaa agggatttca aataggcggg ctgcacgaaa atattcccga gcaacaagca
     1321 cagtaacatc agtatgctca cgaaaatatt ctagcgcaac agcttcaagt gtgtcaatat
     1381 cttttgaaac aacaacgctt ccatttgcat cacgaactag aggatacaga aaatcatcat
     1441 tgttccgcat aaatccttgc ctagtcaaat atttactggg ctctcgatca acaacgtctg
     1501 ttccaattgc aaggcaatac tttgtcattg ttagttcctc ccctcctttt ttaatgaatg
     1561 ataatcgaac gtccgatttt tgtagagatg ctggcacttc acggtattat ctaggtaaaa
     1621 ttcaaacccg ttcgcccata catcaacacc aagccaacga tcatcccacg catccatgtc
     1681 atgagaataa tgaaatttta ttttttctaa cacgcttctt tttatcaaaa tacatcccat
     1741 cccagcaaac gcaatgcgaa gaagctgtgg ttcccagatt tctgaatcca gaaagtaccc
     1801 tgtattgttc cagtctcctt cttccttaga gaacacccac gcaaacggca tcacacggac
     1861 ctcgccacca atgtcatggt gtccaaaata aagagcagag acaacatcct tatcatgtcg
     1921 cataagttgt tcaatgacat cttttggcgg aaccacatct tgatcaagga tcaacaagta
     1981 atcgtagcca ccatcaagca ttttatctcg aataatgtta tggtcgcgta tcaccatgtc
     2041 acggatgcgc cacaggtgcg gtgtttttct cacagcaaat ccttgtgctt tgactttctt
     2101 aaaaaaagta agcccttcag aattgtcaac aaaaaaaata tctttatgcg gatacgttag
     2161 ctctttcaag cgagaagaaa atgcatccca acagtggtca taccattggc agattggcgc
     2221 tgcgacaaga acgcggttca taccagaaaa gaaataaatt aggatttaaa aggattctga
     2281 aactctagga aaacttatcc aactccggca acgtaacacg atgaggatga cagtcttgca
     2341 ggcggttata gagattgtaa ttatcaccaa tgatatggcc aacgccacca acatggatac
     2401 aagcatgctc tgccgtagaa tatgctgctc gtatcccccc ttccattaag atttcgccat
     2461 tatggatgac ttcatgaaac aaagaagggt tccccatacg aagaatttca attaaacgag
     2521 aaggatcttt ataaatggca tctatccaat cctgaaaagt attgcaatcc gagagagaag
     2581 taggcataat ttccttaacg aaattttcta tccctccaaa tgcagaatct ttgattattt
     2641 tggaagcatc acgcttgtca acaaaagagc accttacctc gggatgttct cgcacatatt
     2701 cttcagaggc ccagacttcg tacccgtaga taagagaaat atttttgaat atatcaaaga
     2761 acgtatctcc gaggaatgaa cgatagcgag attcattttg aaggagagaa agagccgcgt
     2821 atgcatgata ctgacgagca gaagccgcac gttcttcatc aatttcaatg gtaataacat
     2881 ctggtcgtac atacgtaaga aacttttgca atctttctgg tcctttcgga tcgatatggc
     2941 aggttccaac gaggtacaaa ttagacatcc tattcaggaa aattcgtctc tttttaaagg
     3001 tgtccataga ataataaata gccccgggcg gattcgaacc gccgtctcga cctccaaagg
     3061 gtcgaatgat tggccgctac ataccgtgga tctcgtcgaa acgaaaaacc tctacggggc
     3121 tatatgcgac caagggtata attacaaaag agcctctatt tttaaattta atgctcccgt
     3181 tcgaaaagaa agagtagatt ttggaataca ataaccaaat tttctccaat aaagatattt
     3241 actataatga actggatttg aaaaacctat agttttaacc catctatgta gagaattctc
     3301 tccagatatt tgataataat attctttatc tcttttatcg taccaacaac aataaataaa
     3361 tcctgctcgg gaaagaagaa ttcctaaatt ctgagaaaat tgactttcct tgaacgcata
     3421 ctgtattctt ggataatagt taatctttct agtttgttta gaaaatttaa gagaaccatc
     3481 tgtgtcaaaa aggcctctaa gaaatagttt caaggatcta gaattaggca aaaaaggaag
     3541 aacaaggtta tctttagcac ctcgccacaa attaaagctt tggagttttt gaaaagcatc
     3601 cttggactca aaactaagat aataagaatt tctatcattc cttcttctaa tacatacttt
     3661 cacactagga aaaatttttt ctataatggg tttaagatag aaagtataat agtaataatc
     3721 ttctaaagag ccaactaaag taattctatt ttcagtacta tggatatgac catctccata
     3781 aattgctcca ataagttcat agacagaaga atgcataaaa aaatataagt aaatctcctt
     3841 taaaaagctc acgcgtattt gccgtgtcca acctacttct taatcaaaaa gtacacttca
     3901 ctccctagtg taaattgctc tgcatgagga acaagttctt taaaccattt caagcgttta
     3961 gcagatatca cctttccacc gcctaaactc cgcgtcgcaa agcttgcaat aatgtacgga
     4021 ctcgtaatcc tctccaaaag cttcgccgta cttcctcgct ctaatgcttc caacgattca
     4081 agcatcttga acataaaaca aatatcagtg tgcacaaacg attctacgct caggatatca
     4141 ccccagcgca cgcctccctg cagcccaaac ttttgcaagt aagtgttaca aaaatccaca
     4201 tcgtctttat tgacatcaat gccatagtat gcaacgtacc ccatccacgg caaagaaaaa
     4261 acatttaacc cgcagccaag gtcaagcact gttttaaatg gcacattttt tctgagtttt
     4321 gcatagagcg gatcatagta aggaactcgc tctttcgtcg acatatgcag ggaaagaatc
     4381 cgtcgtgcaa ctgccttgtc accccaatgt tccatgtttt tcagataatt ttctttgcgc
     4441 gaatatcctg gcaactggta tgcagaatac agctcgcgaa gttttgcacg agcttccttg
     4501 accaacattt ttttttcttt ttctttggtc acatcataat ttgtactgca caaaagcaag
     4561 acacgagaaa caaaagcgtc gctaagacca cgaaactctt tcttgttttt tatttcttca
     4621 agaaacatgc ggtgagcaga accttttagt ttttataaat ctttttcttc aaattcccgt
     4681 cgcatcatgt cacgtttttt cctctcgagc cacttgtaca cattcccatg cggcgcacct
     4741 tgcagcaaca tttccattgc ctgccttgcg acggataccc actcgattct tccaataatc
     4801 cccactgttt ttccatagac tgagattgac gtatccgtca tgtcttctat catctcacgc
     4861 gcccgtcctt cccgtccaat cacgcgcccc ttgacgcgcc gcatatgttt tttagaattc
     4921 cctatatact cttggacgtt tagaagttcc atcatatact ctttgtcaag caagcgctgc
     4981 gcaacgtccg gatggaaacc gcgaccaatt gccttgatta cttgagtagt ttcataaaca
     5041 gtaacgctat cttctccttc gacaagaaca tctccttcct tggaatctac ttctatatgg
     5101 atctgcagac gcttctctag atgctttttc actgccccct tcgtgccgat tagaacagca
     5161 acacgttcaa tggggatttt tagttcttgt ctttccatag tctttcgaac tcctttttta
     5221 ggtctaaaga caatccctgt ttcttgaaat accgcaccag attctcgacg tcacgctgca
     5281 gcaaccgttc cacattcgga tatcggatat caacagcatg ggaaaagtca atcagcacag
     5341 gcttttcttt atgatttaag atattgtact cagatatatc tgcatgcaca agtcctgact
     5401 ctcgaagctt tataatctct tttataagct tttcgtagaa tacttttgga cgctttggcg
     5461 gagcgtagag tagaatcgat gcagggaaat attccatcac cagcacattc ttgtgtacag
     5521 cataaggcat cggtgcagaa acatcatggt catgtgcacg cagcaggttc ctaaattcct
     5581 tttttgccca cgtaaaaata atcgtgagtt ttgaaccctt cacatgagag aacctagggt
     5641 ccggtcgtag gtagtcatac atctttttga agtttgcccc agtgcgataa atttttatga
     5701 tgcgccgttc gtcaccatag atagcagtaa aaacgttact ttctttaccg atagaaacag
     5761 gtccttcaat tctatcaaaa tatccttggc cagaaagttt gaatagagca cgaagtgtac
     5821 tttcatcaaa cacattttca tacgcaataa attttttctt ggacatggga aaaaaagggg
     5881 aaatatactt tataaaagta acttagaact cttcgagatc aacagtcact tctttaatga
     5941 gccctcgccg tcttaaccat tgtacttgcg atgctcgata tttataaatc acgtctccct
     6001 tttcttcgcc gccatattcc cacggctcaa caagaactac atcattttct ctaacccaca
     6061 atcttcgctt caacgcaccg ggaatacggc acacacgaac atgaccatca taacaacgca
     6121 cacgcatacg cccaccgcca agccgcatct caaccacgcc gatactttgc ttacctcgcg
     6181 gcagcttgac acgctgtatt tccattgctt cttgctcttg gcgcagtact tcttctttct
     6241 tcttattcat agagcaaaag gaaaatagga cgatttataa atcttcgcac aacccccgtt
     6301 gaaaatattt cagaatttat gaaaagtttt cagaataaca attaaatcgc ttcttcctca
     6361 tctttgggca tacgaaacaa aattgtcgct cgatacaatt ttttagaagt catacgatct
     6421 tgggtatgca tttttcgtgt gatctttaac tctccatcct taaactttcg tttcaattta
     6481 ggtccgagtg tacttcgtgc aaagcgttgc gaacttatgt aaatatcaat gccagttttc
     6541 aactcttcaa tcttagaaat aaaaacacct ttcctacttt taatttcatg ttcaataaaa
     6601 agatatactt cattattata aggcctaagc tgaataactg cttcaaaata tttgttgtta
     6661 gataagaaaa tagacttggg catgtggaac tccatcaatc ataagtatat ctttttcacg
     6721 aataacattt tcttcaaggg cgagtgcgat cacttttttc ccgacgagat tcaaattgtt
     6781 tccttcgcac aaaatttctt tcacttctgc agaattggta agctctccct tatagaacag
     6841 ttcagaaaca tcaagcacaa attttccttg ctcaaaatgt ttcccgacaa gttctgcatc
     6901 acataccgca atagcacttt cgtgaacttt gacgtatatc atatttttgc ttgcacgaca
     6961 gacttttcac ctcacgcctg acacttctta acgagcttgc ctccttcttc ttctaaaagt
     7021 ttagtatcgg
//
LOCUS       DATDZU010000055         2612 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_277517, whole genome shotgun sequence.
ACCESSION   DATDZU010000055 DATDZU010000000
VERSION     DATDZU010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277517"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..670)
                     /locus_tag="VJJ79_01900"
     CDS             complement(14..670)
                     /locus_tag="VJJ79_01900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22502.1"
                     /translation="MNIVVKEVERELVGAQLKPVAVYFNIVSENGGDRYSEDTLFNRS
                     NRGYPYKITPTELAFWHSTIPRVKGRVKVEGDSVIDDHAKNLGYDPISLHAEDLHFLQ
                     EVVAHWEKIRPHFVQVWSSGQAMAGHISTTYNFPDGTSKVWYTDRFRSDHPESLEKAL
                     ERVRGKPFDTAFHSDFCLYIEGVPVQQHYTHGRLDYYLGRDSLDIEDDKTIQEITAPQ
                     "
     gene            1012..1872
                     /locus_tag="VJJ79_01905"
     CDS             1012..1872
                     /locus_tag="VJJ79_01905"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HLC22503.1"
                     /translation="MVLESLIGVKKAERMPRYVFLLGLLYATVAIFLSLWIFRSEASL
                     ILVFLIVFASLPLMFKTFNFEAKKDLFAKNDNGLMRTHTKALRLFMYLFIGIVIALSV
                     WYVFLPGDMVSDLFSSQVTTIKAINAGGMVTGKTAAWSFLTAIITNNLKVLVLCVLFS
                     FFYGAGAIFILTWNASVIAAAIGTFVRSNIAQYAETFGLFKVAGYFHIFSLGLLRYMT
                     HGVFEILAYFIGGLAGGLISIAMVNHKFEGEHFRMILKDSLNLFILAVIVLLVAGFIE
                     VFVTPMMFYS"
     gene            1905..>2612
                     /locus_tag="VJJ79_01910"
     CDS             1905..>2612
                     /locus_tag="VJJ79_01910"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HLC22504.1"
                     /translation="MCGIIGYCGFKNGVPIALKGLKRLEYRGYDSAGIAFIKENNLEI
                     VKTKGRIIDLQSLADGKEGNIIIAHTRWATHGEPNYVNAHPHVSMDSSVAIVHNGIIE
                     NHSELRKELEEKYHFTFRSQTDSEVIAQLIQFFYDGDFEEAFRKMLTKIDGAFGIAAV
                     HKNHKQIICARKGSPLVLGIGVNEYFIASDPSPFLDATKDVVYLDEKQMAVIDEKGYR
                     IKDFNGLDLHAEIETVPY"
BASE COUNT          797 a          508 c          515 g          792 t
ORIGIN      
        1 gtaagtcaac aagttactga ggagcagtaa tttcttgtat ggttttatca tcttctatat
       61 cgagagaatc ccgcccaaga taataatcca gtcgcccatg tgtgtaatgt tgttgaacgg
      121 gaacgccttc tatgtacaaa cagaaatcag aatggaaagc agtatcaaaa ggtttccctc
      181 gcacccgttc taaggctttt tcaagactct ccggatgatc actcctgaac ctatccgtgt
      241 accaaacctt gctcgtcccg tcagggaaat tatacgtcgt agaaatatgc cctgccatag
      301 cctgcccaga actccatacc tgaacaaaat gagggcgtat tttttcccaa tgcgctacaa
      361 cttcttgaag aaaatgaagg tcttccgcat gaagcgaaat gggatcatag cctaaatttt
      421 ttgcatgatc atcaatcaca gaatctcctt ctacctttac tcttcccttt actcttggaa
      481 tagtagaatg ccaaaaagct aattcagtag gagttatttt atagggatag ccacgattag
      541 atctattgaa gagagtatct tctgaatacc tatcaccacc attttcagaa acgatattaa
      601 aatagacggc aacgggcttt agttgagctc caacaagctc ccgctccacc tctttaacaa
      661 caatattcat aacgaccttg tatgaaaagg aggttataat ctttatgaat aatcattcct
      721 atctttttat attcagcaaa aataaagaga ggagaggcat tgtcacctta gcgaatgatg
      781 cttctttttt gcataaagct taatcagatt gaataggttt tgtctttcaa gttttaagtt
      841 aactttagta atattatcga gagatatttc cttaagtggt atatataaac taacaaaatg
      901 ataatctatt gatttaacca gttagaccaa cgaatacata tttcattcgc taactataca
      961 atatcgagag gagacaagat ttatatagtg ttatatctct atagttaaag aatggttctg
     1021 gaatcattaa taggggtgaa aaaagcggag cgaatgccac gttacgtgtt cctgctaggt
     1081 ttgctctatg caactgtagc gatttttctt agtctctgga tttttcgaag cgaggcaagc
     1141 ctaatccttg tttttctcat agtctttgca tcgctcccgc ttatgtttaa gacatttaat
     1201 tttgaagcaa aaaaagatct atttgcaaag aacgataatg gtctcatgcg tacgcataca
     1261 aaagcattgc gcctttttat gtaccttttt atcggtattg taattgcgtt gtctgtctgg
     1321 tatgtatttc ttcccggaga catggtgtct gatctttttt catcgcaagt cacgacaatc
     1381 aaagcaatca atgcgggagg catggtcaca ggaaaaactg cggcatggtc atttctcact
     1441 gcaatcatca caaataattt aaaagtcctt gttctctgcg tgctcttttc cttcttctat
     1501 ggagctggcg caatcttcat ccttacgtgg aacgcatcag ttattgcagc ggcgattgga
     1561 acatttgtgc ggtcgaacat tgcacagtat gcagaaactt ttggtttgtt caaagttgca
     1621 ggatattttc atatattttc tctaggatta ttacgctata tgacacacgg agtttttgaa
     1681 attctcgcat actttatcgg tggacttgca ggcggattaa tatcgatagc gatggtcaac
     1741 cacaaatttg aaggcgaaca tttccgtatg attctcaagg attcactaaa cttatttatc
     1801 ttggctgtca ttgtcctcct agttgcagga tttattgaag tatttgttac gccaatgatg
     1861 ttttattcat aactcttata ataataataa agaaaagtgg gtatatgtgt ggaattatag
     1921 gctattgcgg atttaaaaac ggggtcccta ttgctctcaa aggtctgaaa agattagaat
     1981 accgaggata cgattctgca ggaattgcgt ttattaaaga aaataatttg gagatagtaa
     2041 aaacaaaagg aagaattatt gatcttcaat cactcgctga tggaaaagaa ggaaacatta
     2101 ttattgcgca tacgagatgg gcaacacatg gcgagccgaa ttatgtcaac gcgcatccac
     2161 atgtatcaat ggattcttcc gtcgcaatcg tccacaatgg catcattgaa aaccatagtg
     2221 agcttcgaaa agaacttgaa gaaaaatatc attttacgtt ccgctcgcag acagactcag
     2281 aagtcattgc acagctgatt cagttttttt acgatggaga tttcgaagaa gcgtttagaa
     2341 aaatgctgac gaaaatcgac ggagcattcg gcatcgcagc agtacacaag aatcacaaac
     2401 agatcatctg cgcacgaaaa ggctcgccgc tggtacttgg tattggcgtg aacgaatatt
     2461 ttattgcaag tgatccctct ccgttcttgg acgcaacaaa agacgtcgtc tacttggatg
     2521 aaaaacaaat ggcagtcatc gatgagaaag gctatcgcat caaagacttc aacggcctcg
     2581 acttgcatgc agagatagaa acggttccgt ac
//
LOCUS       DATDZU010000056         4257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1462719, whole genome shotgun sequence.
ACCESSION   DATDZU010000056 DATDZU010000000
VERSION     DATDZU010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4257
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462719"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VJJ79_01915"
     CDS             complement(<1..967)
                     /locus_tag="VJJ79_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22505.1"
                     /translation="MQKNFVMRTMKRMAAIGTGAVMVGATLTGAMAVELADYPEPFVV
                     DGLYDDSTALVVGDAAGAADSLGAVDIASDLQFQSKVAVAGTGGSVSVVGGKSEKIPL
                     GIGLTNNSLSTFDSTLQDDDVANLFDGEITFQGTSYDTSEEIELPQFDDPLVATSLSS
                     SDDDYKSDVFLEVNSRDVIRFFYKFDETIPISQATASDPLDIEFLGDRMKVTSIDSVG
                     NKFTAYVGDEHYLVTDQTVEVEVDGVTKTVKLLEVSSTSALLDVDGVTKIISDGSTAT
                     VNGVEITVDDVFSRTERAQSSANLIIGAQATETYTDGDAYIGEDKD"
     gene            complement(1285..1707)
                     /locus_tag="VJJ79_01920"
     CDS             complement(1285..1707)
                     /locus_tag="VJJ79_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22506.1"
                     /translation="MKRGQIEILGFVVIVLLLFFSLVIYFQFTSKERTGFIGEAEQNL
                     EVSNLLTAIRYYTVCDGTSLGDAIVSCANEGFACGKDACTLIETDVPALVDAWGWDED
                     SYTFAIDDTVYSPQECSGDTFVDDYTGQGITVRLTFCY"
     gene            complement(1704..2222)
                     /locus_tag="VJJ79_01925"
     CDS             complement(1704..2222)
                     /locus_tag="VJJ79_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22507.1"
                     /translation="MTVLFSSNRAQVEMMETILIAVIFVILLVVALAFYFKFSAESVE
                     QTAENVCLVSNTVLLASIAATPEIACSIEGQREPCIDTTKLLVFDPNRDRLPYSTICS
                     QKVSFEQVYPVPDNDVVCTSNTYPDCTIYPFSEPEGTSVEAGIRISTPVTLYYPLTED
                     YKLGRLVIEIFP"
     gene            complement(2200..3198)
                     /locus_tag="VJJ79_01930"
     CDS             complement(2200..3198)
                     /locus_tag="VJJ79_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22508.1"
                     /translation="MDNRAQFSMPFTTLFAILVGAILLLFFIGFAYKYISFSGALTSA
                     ETVQALNDEFAAFAVSDAAEKTMDFQQDFDFQYRGGSIYSGGQSQSVDQVLFAPAEIQ
                     GDVLFLATRAVELPYRVANAFYLVDGRTMYLFISDEASKSAVDSIVSSYTAFPQTFPH
                     ASYTLEQITDSLALLEETTAMYDSVRFLFFADPSNTLLADIEETFSNAEVLYVESTVE
                     DYTYGDVTFPNGKKAFYLGYPLLLGAMISADASGYEQSIDTVLERLAVVTGVYYDKAR
                     FISARLPACDYGAIKGYLSSYRSFVNKEATYSQFQGYVERVDETNKDLGGDCPVLF"
     gene            complement(3191..3688)
                     /locus_tag="VJJ79_01935"
     CDS             complement(3191..3688)
                     /locus_tag="VJJ79_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22509.1"
                     /translation="MQKRGQLLGLPLILIFGLIVGTLILFFGIRWIQNLVLEAEYINT
                     LDTIGEIENTIKTFRNYDAGSSKIYSLQIPTRIEKICFYDFSADVRCKSNGEPCSAED
                     EDLLHLVLDDKYNVYILPQGLYDTNRYSIEPFQLEGGNPLCVSPGGEILFTADEDAVT
                     IAYHG"
     gene            complement(3910..>4257)
                     /locus_tag="VJJ79_01940"
     CDS             complement(3910..>4257)
                     /locus_tag="VJJ79_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22510.1"
                     /translation="EQDIGHFVDSLGIYLNGNEQGGVVANLSHEEFLIYLNKDLEDMA
                     FDIEGVNNITIIPQDILLEENRLYILISYDQNLSVQEKDSILKEIKIILNERWYVQDT
                     IYRGVSSIVTRNE"
BASE COUNT         1313 a          966 c          825 g         1153 t
ORIGIN      
        1 catccttatc ttcccctatg taagcgtcac catcagtata cgtttccgtc gcttgtgcac
       61 caatgataag gtttgcggaa gactgtgctc tttcagttct actgaaaaca tcatcaacag
      121 tgatttcaac accattgact gttgcggtag agccatcgga gataatcttt gtaaccccgt
      181 caacgtcaag caatgcagag gttgaagaaa cttccaaaag tttcactgtt tttgtgacac
      241 cgtcaacttc gacttcaaca gtttggtctg tgacgagata atgttcatct ccaacatatg
      301 ccgtgaactt gtttcctaca gagtcaatac tggtaacttt catcctgtca cccaagaatt
      361 caatatctag gggatcagat gccgttgctt gtgagatagg aatagtctca tcaaacttat
      421 agaagaaccg gataacatcc cgtgaattga cttctaaaaa gacatctgac ttatagtcgt
      481 catctgaact tgacaaactg gtcgcaacaa gcgggtcatc aaactgaggc agttcgattt
      541 cttcagaggt atcataactc gtcccttgga aggtaatttc cccatcaaac aagtttgcaa
      601 catcatcgtc ttgtaacgtg gagtcaaacg tcgacaaaga gttgtttgtc aaaccaattc
      661 ctaaaggaat tttttctgat tttccaccaa caacagaaac tgagccgccg gttcctgcaa
      721 ctgcaacttt agactgaaat tgcaagtctg aggcaatatc aaccgcgcct aagctatctg
      781 ctgctcctgc tgcatctcca acaactaatg ccgtggaatc gtcatagaga ccatctacaa
      841 cgaacggttc tggatagtca gcaagctcga cagccatagc tccagtaagg gtagctccta
      901 ccataacagc ccctgtaccg atggctgcca ttcttttcat tgttctcatt acgaaatttt
      961 tctgcatgta cacaacacct ccctgtgtgt tatacgattt aatgaatatt cttccatatg
     1021 ccacgtcgtg actccttata gcaaaattac tgtggctaat tggttagcgt atcctataga
     1081 ttccaagaaa tccttataaa catttatcgc ttccagcaca agtaaaatac acaaaagtac
     1141 caaactcttg ggagataagc cttaattctg ctaaggaaga ggagtctata tgactgctcc
     1201 agatactact actttggtac agcagaccat aagttgtaga atcccttaat tttaaagaat
     1261 ggaccatttt actgaaactc ttactcagta acaaaaagtc agcctcacag taataccctg
     1321 ccctgtatag tcatctacga aggtatcgcc actgcattcc tgtggagaat agactgtatc
     1381 gtcgattgca aaagtatacg aatcctcgtc ccacccccat gcatcgacga gcgctggcac
     1441 atctgtttct atcagggtgc acgcatcctt tccgcaggca aacccttcat ttgcgcagga
     1501 gacaatcgcg tcccctaatg aagttccatc gcaaacagta taatacctaa tcgcagtcaa
     1561 aagattcgat acctcaagat tttgttcagc ttctccaata aacccggtcc gttccttgct
     1621 cgtgaactgg aagtagatga ccaaactaaa gaaaaggagc aggacgatca caacaaagcc
     1681 aaggatttct atctgtccgc gtttcatggg aaaatttcta ttactagcct ccctaattta
     1741 tagtcttctg tgagtggata atataatgta actggagtag aaatacgaat gcctgcttcc
     1801 acggacgtgc cttccggttc agagaacgga tagatcgtac aatcagggta tgtattagat
     1861 gtgcacacaa cgtcgttatc gggaacaggg tacacttgtt caaaagaaac tttttgggaa
     1921 caaatggtcg aataaggcaa tctgtctcga ttaggatcaa agacaaggag tttcgtagta
     1981 tcaatacaag gctccctctg tccttcaatg ctgcacgcaa tctccggcgt cgcggctatg
     2041 gatgctaata atactgtatt ggaaaccaag cacacgtttt ctgccgtttg ttcaacactt
     2101 tctgcagaga acttgaaata gaatgcaagg gcaacaacaa ggagaatcac aaatatcaca
     2161 gcaatcagga tagtttccat catttcgact tgtgcacggt tagaagagaa caggacagtc
     2221 accccctaag tctttgtttg tctcatccac tcgttccacg tatccttgga actggctgta
     2281 cgttgcttcc ttattgacaa acgagcggta gctgctcagg tatcctttaa ttgccccata
     2341 gtcgcaggca gggagccgcg cagaaatgaa ccgtgccttg tcgtaataca cgccagtcac
     2401 tacggcaagc cgttcaagta cagtatcaat gctctgctcg tacccagacg catcagcaga
     2461 aatcatggca cctaataata agggatagcc aaggtaaaat gccttttttc cattagggaa
     2521 ggttacatca ccataggtat agtcctcaac agtcgactct acatacagaa cctccgcatt
     2581 agaaaatgtt tcctcgatat ctgcaagaag ggtatttgaa gggtctgcaa agaagagaaa
     2641 gcgaacggaa tcgtacatgg cagtcgtttc ctctaataat gcaagggaat cagtaatttg
     2701 ttctagggta taggatgcat gcgggaacgt ttgggggaat gcagtatagg aggaaacaat
     2761 tgaatcaacg gcacttttag acgcctcatc agaaataaaa aggtacatcg ttcgcccatc
     2821 aaccagataa aaggcattcg cgacgcggta cggaagttca acagcacgcg ttgcgagaaa
     2881 aagaacatcg ccttggatct ctgcaggcgc aaaaagaact tggtccacag actgcgactg
     2941 accaccgcta tatatacttc cgccacgata ttgaaaatca aaatcttgtt gaaagtccat
     3001 tgttttttct gcagcatcgc tcacggcaaa tgcagcaaac tcgtcattca atgcctgcac
     3061 tgtctcagcc gacgtgagcg caccagaaaa agaaatatac ttgtaggcaa agccaatgaa
     3121 aaagagcaat aagattgcgc cgactaaaat agcaaagagc gtggtaaacg gcatagagaa
     3181 ctgtgcacga ttatccatgg tacgcaatgg tcaccgcgtc ctcgtctgca gtgaacagaa
     3241 tttctccgcc tggagaaacg caaaggggat ttcctccttc aagctggaac ggttcaatag
     3301 aataacgatt tgtgtcatac aatccttgtg ggagaatgta tacattatat ttgtcatcaa
     3361 gcacgagatg gagcagatct tcatcttcag cagaacacgg ctccccattt gacttacacc
     3421 gaacatctgc agagaaatca tagaaacata ttttttcgat acgtgttggt atttgtaggg
     3481 aatagatttt tgaagagcct gcatcataat tgcgaaatgt ttttattgta ttctcaattt
     3541 ctccgatggt atctaatgta ttgatgtact ctgcttcaag cacgaggttt tgaatccagc
     3601 gaatgccaaa gaaaagaatc aacgtaccga caatcaatcc aaagattaag attaatggca
     3661 acccaagaag ctgtcccctt ttttgcatag ataaaacaaa acgttagagg aatataaaga
     3721 ttgcgtcaac gagcaggatg agtgtaatta attcctgaat ctataacgca aacagtttgg
     3781 ccttccccct gaaaacctaa gctttgtact ttatctgcat aagtaagctt aatactttca
     3841 tctgaagcga ggactaacgg aagaaaaata aaagtaaaca agccaactat aaccagaatg
     3901 caaactaatc tactcgtttc gtgtaacaat agaacttacc cccctatata tcgtatcctg
     3961 aacgtaccac ctctcattta aaataatttt tatttctttc aaaatagaat ctttttcttg
     4021 cacagataag ttttgatcat agcttatgag aatataaagt ctattctctt caagtaatat
     4081 atcctgagga ataattgtaa tattatttac tccttcaata tcaaaggcca tatcttctaa
     4141 atctttattc aaataaatta aaaattcttc atgagacaga tttgcgacta cccccccttg
     4201 ttcattccca ttaagataga taccaagaga gtctacaaag tgtccaatat cctgttc
//
LOCUS       DATDZU010000057         8029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1083952, whole genome shotgun sequence.
ACCESSION   DATDZU010000057 DATDZU010000000
VERSION     DATDZU010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 8029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8029
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1083952"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="VJJ79_01945"
     CDS             <1..851
                     /locus_tag="VJJ79_01945"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007982179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HLC22511.1"
                     /translation="EGLQKMFPGRVFDTPLAESGIVGASIGLAACGFRPVAEMQFEGF
                     IFPAFDQIVNHASRIRNRSRGRFTCPIVIRSPIGGGVKGLEHHSESPEAYFAHIPGIK
                     VVIPSTPYDAKGLLVSAIRDPDPVIFFEPKRIYRAIKQDVPDKEYTIPLGKARVVAEG
                     TDVTVISYGAMVRECEQAVENLKDHVSIELIDLRTIRPLDVDTVMASVKKTGRVVIVH
                     EAQKTMGVAAEVIALINEHALLSLNAPVERVTGYDVIVPLPKLEEYYVIDEKRIAEAI
                     EKVVNF"
     gene            852..2078
                     /locus_tag="VJJ79_01950"
     CDS             852..2078
                     /locus_tag="VJJ79_01950"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HLC22512.1"
                     /translation="MQFKFPDVGEGITEGEIVEWLVKEGDIVKEDQTIVKVETDKAVV
                     DLPSPASGVVLKIFKKEGETVKVNEALVEIGESKGKRKEEPTVKRSVSVVGELEEAVE
                     EKPLPLEVRKKEKVSGREVKAMPSVRKVAQEKWIDLSKIKGTGKLGQVRMEDITGVVK
                     EARAEMQPKITITKKYDMWGYVDHVPLKGMRKAIKEHMERQALIPMVTHMDEADVTVL
                     AGIRDKENKKVKDIKVTFLPFILKAVIGGLKEYPVLNASLGDGEIILKKYYNIGIAVS
                     TDDGLIVPVVKGADKKSMLYIAKEISDLAERARKRTIDLQDVKGSTFSITNVGSIGGI
                     FATPIIHGDEAAILALGKICEKPIVVNGTIKVRKILPLSLTFDHRILDGAVAALFVNK
                     VKEYLEDPDRLLLELM"
     gene            complement(2140..2940)
                     /locus_tag="VJJ79_01955"
     CDS             complement(2140..2940)
                     /locus_tag="VJJ79_01955"
                     /inference="COORDINATES: protein motif:HMM:NF014299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22513.1"
                     /translation="MVHRYRGTFTVFEGVDGTGKGVAIDSIADALRAEGLVVLDLCHF
                     WKKYPSLPKWTDKPFSENSSIPLNSFDVLISEEPTYSWIGAALRQEVIAKNSRQYSAH
                     MTAELYAADRMLLYQRVLLPALEAGKHVIQSRCVLSSMVYQPLQEILHDENPLTIEDV
                     LQLEGNKFVLEHAPNLLLLATVPDVTMLTERFAQRKKKDDAIFEEIGFLRKIKNAYES
                     ERLRSIFESYGTNVWTLDASISPEKTAWQAVTFYMQRFPEIFHKKREI"
     gene            complement(3014..4954)
                     /locus_tag="VJJ79_01960"
     CDS             complement(3014..4954)
                     /locus_tag="VJJ79_01960"
                     /inference="COORDINATES: protein motif:HMM:NF033506.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative S-layer protein"
                     /protein_id="HLC22514.1"
                     /translation="MKQLISSILLMLVLSLTMVSAANFDAAFEDDSLTGDIGDILTFT
                     VTVTNTGTETLSSVTLTSSILEDGSGHSLSAPTVNDIVDLASDTPQDVSFNVVIPSTA
                     FAGLYTGTLTVDDGVVEPLELPYSVDVSSVTFFSTSSSALSVELFSGDEASTTFTITN
                     DGSEPLTDLDISYTSEDGDAEKFEDNDNDEGTVTFSSSTMLNPGSSVTVTVTVDTDAE
                     VDTGSYDGTVTVTATGAPSKTLSLAVEVTPQICEEGKQGDDFVIDIEEPEANDEYLPG
                     DTISLEVSVENMANENLDVVVEATLYNIKEGKKEVTAKVDGKIDEDETETFKFDLELP
                     TDLDDEDEYELYIQVHEDGNEDDSCDFESLSLDIERDDQDAQITSTDVTPSTDLMCNS
                     AYTVSVTVESLGRDELRDTYVELLDGDLDVQTSSETFTLGDYNDNDKSEKVDFGLTIP
                     EGLTEGTYTLEAILYNEDGDTLDSEFITVTVGECGIENVALAAGTGTLNVVVADTYDV
                     EGDELTLSMLIINMDDSATTLRVGAEDVSWATLDGAEYIDTLNPGDQTHAYLYFTLDP
                     TTVGKHDMTLTVVDSDGNAVTKIVTLDFGEEGTAEGDAFFSGISGWFTQKSQSVGSFW
                     IIADVILVILSLVFLRLLFSKK"
     gene            complement(5057..>8029)
                     /locus_tag="VJJ79_01965"
     CDS             complement(5057..>8029)
                     /locus_tag="VJJ79_01965"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22515.1"
                     /translation="SVFEEKKQKAMNEMSRVQEKLNEADIILTERDKTLNDLKKDRDQ
                     AVKYKELEKNIERNKATHVSLLLKEKSDAYADVEKNHAALESDISSLQEEIGGIKLEI
                     LEKKKEIEAITHELNEKGDKRQRELSKEIDTFKTKIIKDTSRKDVCENELKKLQERKK
                     GLEQSVKEYEKKVSELQNLRIKKGKEDEDLNKKETLLLQKISAYKKKHGIEQKDDLSQ
                     AIETLDKSIEEKQRIHLSVAEEKQQILRKKDRLEYELQSFTAQIEKVEGLKKEDQEKV
                     AKLKRNREEFKHLTKQLSDALNESSVFSAQLGSARRKVMEAEDEHAKLRTRSIGIREV
                     TASDLAIRKILDKKMNGVYGTVAELGNVQGKYALALEVAAGPRLKSVVVSSDQVAAQC
                     IQFLKENKFGVVTFLPLNKLQERAISGQEKQLAKEPGAHGLAIDLVSYSEKFSTVFKY
                     VFGGTIVVEDMNVARKLGIGRGRMVTIDGDLAETSGAMVGGYRRRGGLGFQEKEVTGG
                     MERLEKDITRLRDSIMLLEKQKTENEEIIIHSRERKAVLEAEIHTAEVQIGSTGDMKE
                     LETKCKDFIAQVKELERAIKEKEQEERHIGQELSTLKDEKQKELDTLSELSSSEVNKE
                     LDTFETERQTLRERVITNESEVRSYGNQTDLFTTEKEKVLAILKANEKEFEMFSQELK
                     GLVEELKADADVLKIKEKTQKEFYAEYQDMFNTRAKCDAHIQKKDVIAIRLEERTRNI
                     EGKRNDVSIKKAVLAGEIEGLKKEFERYENVQLRRGISLQDLNAEIKQFENMLKTLGN
                     VNLRSLEIYEKVSEEYMHLREKFDTLKIEKDDILKMMYEIESKKQETFMRTYNLLERN
                     FKEIFASLSTKGEAELVIENTENIFDGGIDIRVRLAGTKYLDIKGLSGGEKTLAALAF
                     IFAIQEFEPSHFYLMDEVDAALDKHNSELLSKLIAKYSKAAQYIVISHNDAVVSEAQT
                     IYGVTMQDGISTVVSLKV"
BASE COUNT         2103 a         1733 c         1689 g         2504 t
ORIGIN      
        1 cagaaggctt gcaaaaaatg tttcctggta gagtttttga tacgcctttg gcagagtcag
       61 ggattgtggg cgcgtctata gggcttgcag cgtgcggttt ccgtccggtc gcagaaatgc
      121 agtttgaggg atttattttc ccagcatttg accagatagt caaccacgcg tcacggataa
      181 gaaatagaag cagaggacga tttacctgtc ccatagtgat ccgttctcct atcggcggcg
      241 gcgtgaaagg attggagcat cacagcgaga gtccagaggc atactttgcg catatccctg
      301 ggataaaggt agtcatcccg tccactccat atgatgcgaa aggattgttg gtgagtgcaa
      361 ttcgcgaccc agatcccgtg atattttttg aaccaaagag aatctaccgc gccataaaac
      421 aagatgtgcc tgataaagag tacacgattc ctctcggaaa agcgcgcgtg gttgcagaag
      481 gcacggacgt caccgtgata agttacggtg caatggtgcg ggaatgtgag caagcagtag
      541 aaaatttaaa ggaccatgtc tctatagaac tcatagatct cagaacaatc aggccattgg
      601 atgttgatac agttatggca agtgttaaaa aaactggaag agtggtgata gtccacgagg
      661 cacagaaaac catgggcgtt gctgcagagg tgattgcgct gattaacgag catgcgctgt
      721 tatcattgaa cgcaccagta gaacgtgtga caggctatga cgtcattgtt ccattgccaa
      781 agcttgagga gtattatgtg attgacgaaa aaagaatagc tgaagcaatc gaaaaagtgg
      841 tgaactttta gatgcagttt aagtttcctg acgtgggcga aggaattaca gagggcgaaa
      901 ttgtcgagtg gctggtgaag gaaggagaca ttgtcaagga agaccagacc attgtaaagg
      961 tagaaacaga caaggccgta gttgatcttc catcgcccgc atccggtgtc gttctcaaaa
     1021 ttttcaagaa agaaggagag acagtaaaag ttaatgaagc gttagtggag attggcgaaa
     1081 gtaaaggaaa gagaaaagaa gagcctacgg taaaaagaag cgtgtcagtc gttggtgaat
     1141 tagaggaagc tgtcgaggaa aaaccattgc cattggaagt gcgcaagaaa gaaaaagttt
     1201 ctgggagaga agtcaaggcc atgccatcag tgcggaaagt tgcacaggag aaatggattg
     1261 atctttcaaa gataaaagga actgggaaac tggggcaggt ccgtatggaa gatataaccg
     1321 gcgttgtaaa agaagcgcgt gcagaaatgc agccgaaaat tactattacg aaaaagtacg
     1381 acatgtgggg ctacgtagat catgtgccgt taaaaggaat gcgaaaggct ataaaagaac
     1441 atatggaacg gcaagcactt attccaatgg tcacacatat ggacgaggca gatgtcacag
     1501 tacttgcagg cattcgagat aaagagaata aaaaagtgaa ggatattaag gtaacatttt
     1561 taccgttcat tctcaaagca gtgataggcg gactaaaaga atatcctgta ctgaatgcat
     1621 ctctcggtga tggggaaatt atcctaaaga aatattataa tattggtatc gccgtttcaa
     1681 cagatgatgg tcttatcgtg cctgtcgtca aaggagcaga caagaaaagt atgctctata
     1741 tcgcaaaaga aatctctgat cttgcagagc gagcacgaaa gcgaacaatt gatttacaag
     1801 atgtaaaggg gagtacgttt agcattacaa atgttggttc gatcggcggc atctttgcaa
     1861 caccaattat tcacggcgat gaggcggcca tccttgctct tggaaaaatt tgtgaaaagc
     1921 ccattgttgt taatggaacc ataaaggtac gaaaaattct tcccctcagt ctcacattcg
     1981 atcacaggat tctcgatggc gcagtcgcgg cgctatttgt gaacaaggta aaagaatatc
     2041 ttgaagatcc ggatagactc ttattggaat taatgtagca tgtcttcagg attgatcctt
     2101 gggagaatta ggtaggctcc tcctagcagg caccattatt taaatctcac gttttttatg
     2161 aaaaatttca ggaaatcgtt gcatatagaa cgtgactgct tgccatgcag ttttttcagg
     2221 agaaatgctc gcatcaagag tccatacatt ggttccataa ctttcaaaaa tagaacgaag
     2281 gcgttcactt tcatacgcgt ttttaatctt gcgtaaaaat ccaatctctt caaagattgc
     2341 gtcatctttt ttctttcgct gggcaaatct ttctgtaagc atagtaacat ctgggactgt
     2401 ggcgagaagc aaaaggtttg gcgcatgttc aaggacaaac ttattgcctt caagctgaag
     2461 tacatcttca attgttaacg gattttcatc gtgaaggatt tcttgcagag gttgatagac
     2521 catggaagaa agaacgcatc gtgactgaat aacatgtttt ccagcttcta atgctgggag
     2581 taaaacgcgt tgatacaaaa gcatacgatc agcagcatag agttctgcag tcatgtgcgc
     2641 agagtactgt cggctatttt tcgcaataac ttcctgccgt aatgctgcac ctatccagct
     2701 gtatgttggt tcttcagaga taagaacatc aaaactgttc aaaggaatag aactgttctc
     2761 ggagaatggt ttgtctgtcc attttggaag cgagggatat tttttccaga agtggcaaag
     2821 gtctaagaca acaagccctt ctgcgcggag tgcgtctgca atagaatcaa tggcaacccc
     2881 tttccctgtg ccatcaaccc cttcaaaaac agtaaacgtt cctcgatacc tatggaccat
     2941 agcatgatgg agaaaaaata aatttataag gaattatatt ctaaaatata cgaattttaa
     3001 gaaaaagaaa aaattatttc ttgctaaaca agagtcgcaa gaagaccagt gagaggatca
     3061 ccaggatcac gtctgcaata atccagaagc ttccgacgct ttggctcttc tgtgtgaacc
     3121 atccactgat tccagagaag aatgcatctc cctctgcagt tccttcctcg ccaaagtcta
     3181 gcgtgacgat tttcgtaact gcatttccat cactgtcaac aacggtaagc gtcatatcat
     3241 gtttgcccac tgttgttgga tctaaggtga aatagaggta cgcatgggtc tggtcgcctg
     3301 ggttaagtgt gtcgatgtac tctgccccat caagtgttgc ccaggaaaca tcttcagcac
     3361 caactctaag cgtagttgca ctgtcgtcca tgtttataat cagcatagaa agcgtcagtt
     3421 cgtcaccttc aacatcgtaa gtatcggcaa cgacaacatt tagtgttcca gtgccagcgg
     3481 caagtgctac attctcaata ccacattctc caacagttac ggtgataaat tcgctatcca
     3541 aggtatcgcc atcttcattg taaaggatcg cttccagcgt atatgttcct tctgtaagac
     3601 cttctggaat ggtgaggcca aagtcgactt tttcagattt atcattatca ttgtaatcgc
     3661 cgagagtaaa tgtttccgag ctagtctgaa catcaagatc gccgtcaagc agttccacgt
     3721 acgtgtctct gagttcgtct cttccgaggc tttcaacagt aactgagacg gtgtatgcag
     3781 agttgcacat aaggtctgta cttggagtta catctgtgct ggtaatttgc gcatcttgat
     3841 cgtcccgttc aatgtcgaga gaaagacttt caaagtcaca gctatcgtcc tcgtttccat
     3901 cttcgtgcac ttggatgtac aattcgtact catcttcatc atcaaggtca gttggaagtt
     3961 caaggtcaaa tttgaacgtt tctgtctcat cttcgtcgat ctttccgtca actttagctg
     4021 ttacttcttt ctttccttct ttgatattat agagagttgc ttcgacaaca acatcgaggt
     4081 tttcattagc catattttct acggatactt ccagggaaat agtgtcacca ggcaggtatt
     4141 cgtcgtttgc ttctggctct tcaatgtcaa tgacaaagtc atctccctgc tttccttctt
     4201 cacagatttg tggcgttact tcaacggcaa gggaaagtgt tttacttgga gcgcctgttg
     4261 cagtgacggt aactgttcca tcataagacc cagtatcaac ttcagcatca gtatcaacag
     4321 tcactgtcac agtcactgaa gaacctggat tgagcatcgt acttgaggaa aatgtaacag
     4381 ttccttcatc gttatcatta tcttcaaatt tctcagcatc gccgtcttca ctcgtgtaag
     4441 aaatatcaag gtctgtcagc ggttcgcttc catcgttcgt aatggtgaac gttgtgcttg
     4501 cttcatcacc agagaacagt tcaacagaaa gcgcactgct gctggtgctg aaaaatgtga
     4561 cagaactaac gtccaccgaa taaggaagtt ctagcggttc tactactcca tcgtccacag
     4621 tcaatgttcc cgtatacaga cctgcaaatg cagtgcttgg tattaccaca ttgaaagaga
     4681 cgtcttgagg agtatcagat gcaaggtcaa caatatcatt aactgttggt gcactgagag
     4741 aatgtccgct tccatcttca agaatgctac ttgttaaagt gacagaagaa agtgtttctg
     4801 ttcctgtgtt tgttactgta acagtaaatg taagtatgtc gccaatgtct ccagtgagac
     4861 tatcatcctc aaatgcagcg tcaaagtttg ctgcgctaac catagttagg ctaaggacta
     4921 acattaaaag aatacttgat ataagctgtt tcataggtta aacccccgat tatgataggt
     4981 aaaccacaaa aatacccttt tttaaacatt atggaagaag aagctgtatt tcgtcccaaa
     5041 tttaggacaa cgtttttcag acttttaagc tcactacggt tgagatgccg tcttgcatcg
     5101 ttacaccata aattgtttgc gcttcagaaa caactgcatc gttatgcgaa atcacaatgt
     5161 attgtgcagc ttttgaatac tttgcaataa gttttgacaa tagctcagag ttatgcttgt
     5221 caagtgcagc atcaacttcg tccataaggt agaaatgtga tggttcaaat tcttgaatcg
     5281 caaatataaa ggcaagtgca gcaagcgttt tttctccgcc tgaaaggcct tttatatcta
     5341 agtatttggt cccggcaagc cgcacacgga tatcgatacc tccatcgaaa atattctctg
     5401 tgttttcgat aaccagctct gcttcgcctt tagtcgagag ggacgcaaag atttctttga
     5461 agtttctctc cagcaaatta tatgttcgca tgaacgtttc ttgcttttta ctttcaatct
     5521 catacatcat cttgaggata tcatccttct ctatttttaa cgtgtcaaac ttctcccgca
     5581 agtgcatgta ttcctcggac actttctcgt aaatctctag cgaacgtaag ttcacgtttc
     5641 cgagagtttt tagcatattc tcgaattgtt ttatctctgc gttcaagtct tggagagaaa
     5701 tacctcgacg cagctgcacg ttttcatacc tttcaaattc tttttttaat ccttctattt
     5761 ctccggcaag cactgccttc ttgatagaaa catcgttcct ttttccttca atgttgcggg
     5821 tccgttcttc caggcgaatt gctatcacat ctttcttttg aatatgcgcg tcgcactttg
     5881 cccgtgtatt gaacatgtct tggtactccg catagaactc cttctgtgtt ttttctttaa
     5941 tcttgaggac atcagcatct gctttcaatt cttcgacaag tcctttcagt tcttgcgaga
     6001 acatctcgaa ctctttttcg ttagccttta ggattgcaag tactttttct ttctctgtgg
     6061 taaacaaatc cgtttggttt ccataggatc gtacctcaga ttcattcgta atcacacgtt
     6121 cgcgtagcgt ctgtcgttcc gtttcgaatg tgtcaagttc tttattgact tcggaactgc
     6181 tcaattcgga taatgtatcc agctcttttt gtttttcatc tttcaatgta gagagctctt
     6241 gtccgatatg cctttcttct tgttcttttt ccttgattgc acgttctagt tctttcactt
     6301 gcgcgataaa atccttgcat ttagtttcaa gctctttcat gtcaccagtg cttcctatct
     6361 gtacttctgc ggtatggatc tcggcttcaa gtactgcttt tcgttccctc gagtggatga
     6421 taatttcttc gttctccgtc ttttgttttt caagaagcat gatggaatct ctgaggcgcg
     6481 tgatatcttt ttccaaccgt tccatgccgc cagtcacttc tttttcctgg aatccaagac
     6541 cgccccttct tctgtacccc ccaaccatag ccccagatgt ttcagcaagg tcgccgtcaa
     6601 tcgtgaccat acgccctctt cctatgccca gttttcgtgc aacgttcatg tcttccacaa
     6661 caatagtgcc gccaaagaca tacttgaaca ctgtcgagaa cttttcgcta tagctcacga
     6721 ggtcaatggc taacccatgt gcaccaggct cttttgctaa ctgtttttct tgtccactaa
     6781 tggcgcgttc ttggagttta tttagaggta agaatgtaac aacaccaaac ttattttctt
     6841 tcagaaactg gatgcattgc gcagctactt ggtcgctaga aacaacgaca cttttgagcc
     6901 gtggtccggc agcaacttcc agcgcaagcg cgtacttccc ttgcacgttt ccaagctctg
     6961 caaccgtgcc atacactccg ttcatttttt tatcaagaat ttttctaatc gcgagatcac
     7021 tcgcagttac ttcgcggatg ccgatgctgc gtgtgcgaag ctttgcatgc tcatcctcag
     7081 cttccattac ttttcgtcgc gccgagccaa gctgtgcaga gaacacactg ctttcattta
     7141 atgcatcaga aagttgtttc gttaggtgct taaactcttc tcggtttctc ttcaactttg
     7201 caactttttc ctggtcctct tttttcaacc cctctacttt ttcaatctgg gcagtaaacg
     7261 attgcagttc atactcaagg cgatcttttt tcctaagaat ctgttgcttt tcttcagcta
     7321 cactaaggtg tattcgttgt ttttcttcga tgctcttgtc gagtgtttct attgcttgag
     7381 ataggtcatc cttctgctcg atcccatgct tttttttgta ggcacttatt ttttggagca
     7441 acaatgtttc ttttttattc aggtcctcgt cttcttttcc tttttttatg cggaggtttt
     7501 gcaattctga gacttttttt tcatactctt ttacgctctg ctcaagtcct tttttccgtt
     7561 cttggagttt cttgagttcg ttttcgcata cgtcttttcg cgaggtatct ttgataattt
     7621 ttgtcttgaa tgtatcaatt tctttgctca attccctttg tcgtttgtcc cctttttcat
     7681 tgagttcgtg cgtgattgcc tcaatttctt ttttcttctc tagaatttct agcttaatgc
     7741 ctccaatttc ttcttggaga gaactgatat ccgattctaa tgcggcatga tttttttcga
     7801 cgtctgcata tgcatcactt ttttctttga gcaaaagaga gacgtgcgtt gctttgtttc
     7861 tctcgatatt tttttcaagt tctttgtact ttactgcttg gtccctgtct tttttcaggt
     7921 cgttcaatgt tttatctcgt tccgttagga taatgtccgc ttcatttagt ttctcttgca
     7981 ccctgctcat ttcgttcatt gctttctgct ttttttcttc gaaaacgga
//
LOCUS       DATDZU010000058         7680 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1632352, whole genome shotgun sequence.
ACCESSION   DATDZU010000058 DATDZU010000000
VERSION     DATDZU010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7680
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1632352"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VJJ79_01970"
     CDS             complement(<1..380)
                     /locus_tag="VJJ79_01970"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HLC22516.1"
                     /translation="MWTDIFRMRQWYKNLIIFLPLFFVGLATNGKSFFLVTLGFVALC
                     LMSSANYILNDIADKEKDKVHPEKKYRPLASGKISMWTAGVLAAFCATLSISLASFLS
                     ENFFYLLLLFFFLTQLYSFALKNEL"
     gene            506..1024
                     /locus_tag="VJJ79_01975"
     CDS             506..1024
                     /locus_tag="VJJ79_01975"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLC22517.1"
                     /translation="MKRVVLVFLLLLLLGCAEEKAEVTQSTMESKTYAIVETSKGNFT
                     ILLYEDTPVTTENFVTLAQSGFYDGLTFHRYEPGFVIQGGDPNGDGTGGSAEKIPLEI
                     AQGRSHTRGTIGMARSQDPDSASSQFFVNLGDNYFLDGGYAVFGDVVEGVDVADSLRA
                     GDVMTKVSIVQK"
     gene            complement(1045..2022)
                     /gene="galE"
                     /locus_tag="VJJ79_01980"
     CDS             complement(1045..2022)
                     /gene="galE"
                     /locus_tag="VJJ79_01980"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019851321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HLC22518.1"
                     /translation="MKTILVTGGAGYIGSVTVRRLRENGYDVVVLDNLSRGNKDAVPG
                     DVPLIAADISAKDALDDIFTNYSIDAVMHFAAFAYVGESVENPILYFENNLEKSIRFF
                     HQMQKHGVKNIIFSSTCAVYGVPSQVPITETEKKKPINPYGLTKSLIEEVLEWHTQNN
                     GLASVSLRYFNAAGAAYGIGEDHKPEAHLIPLVLQVALGQRDSVNLFGTDYPTPDGTC
                     IRDYIHVLDLADAHILALKSLEEGKAKVYNLGTGTGHSVNEVIDMCRAVTMHQIPTKV
                     CEQRQGDPPMLVASAKKIEEELDWKPQYSLSESIASAWDWHRKNPGGYA"
     gene            complement(2019..3389)
                     /locus_tag="VJJ79_01985"
     CDS             complement(2019..3389)
                     /locus_tag="VJJ79_01985"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HLC22519.1"
                     /translation="MKLAFAGAGFVGIVYGAMMAKKGNSVTIYDVDEKKISALNDFCE
                     GKKNSLPIHEEGLPTILEQAYKEGLLRFTTDSKQAISDAEVIFLTVGTPSDAQGRADV
                     RYVNAAAHTIGKVMKEDAKYKLIVTKSTVPVGTAKRLEEIIGTYAVGKFDVASNPETL
                     AEGKAVKDAEEPQRIIVGTESERARRILSDLYAPFFFPGEKGICFMSPESAELTKYAC
                     NTYLASQVVLTNMFANLAKRYGANWREILEAIGADPRIGKFVHPGLGFGGSCFKKDVS
                     ALCQMMKDTGAVREDYEVLERIIAQNEAQKHALNPLLKQVYGESLDGQTLAVWGLAFK
                     KDTNDVRDAASLRVIPDLLQMGAHVRAHDPKAAKEFLKEIGAMDVDMANLEICKEKYA
                     ATEGADGLLIITEWITYRQPDFAELREKMRRRIIFDAKDLMNYQKMQEETDFSYYAIG
                     RPDIVR"
     gene            complement(3809..4594)
                     /gene="mtnP"
                     /locus_tag="VJJ79_01990"
     CDS             complement(3809..4594)
                     /gene="mtnP"
                     /locus_tag="VJJ79_01990"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014812027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HLC22520.1"
                     /translation="MIKIGIIGGSGLDDPKLLDNYEVVDVATPYGQPSSSLTKGKVNG
                     IDIVILARHGKNHQIMPSNVNYRANIWALKELGCTHILATTAVGSLKEDIAPGHLVFP
                     DQFIDRTTKRAQTFYDTNRVCHIPMAEPFCPKLKALCAQTARILAIPHHEKGTVVTIE
                     GPRFSTKAESHMFRSWNADIINMSTVPEVVLAREAGLCYASIAMSTDYDCFREDVTPV
                     TLDEVLCIMKENAEKVKNLIKTIVPKIQYIECSCKEAINGSLI"
     gene            4704..5027
                     /locus_tag="VJJ79_01995"
     CDS             4704..5027
                     /locus_tag="VJJ79_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22521.1"
                     /translation="MVLENRYRLVGNRKARILLFLGGCVLDNDNERGSRFVKDPDTFL
                     RGYGFHYHFRDVSWVVYEKNFGPLEGVTVRFYSESANGKRAIEIRGLEQAVYDEKYYM
                     GLNIQ"
     gene            5058..5312
                     /locus_tag="VJJ79_02000"
     CDS             5058..5312
                     /locus_tag="VJJ79_02000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22522.1"
                     /translation="MHPTTLSKYPGTLEDLATEVASLRYDKVAEFLHYLGEEIRKQRD
                     ADRRRGRSRLASRLEETAEGLYKARDCFKRAWDICKPYER"
     gene            5360..5498
                     /locus_tag="VJJ79_02005"
     tRNA            join(5360..5447,5478..5498)
                     /locus_tag="VJJ79_02005"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5430..5432,aa:Trp,seq:cca)
     gene            complement(5537..5980)
                     /locus_tag="VJJ79_02010"
     CDS             complement(5537..5980)
                     /locus_tag="VJJ79_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22523.1"
                     /translation="MNRKAMVFLYICAIAFIIAIVTFYGSIGKQTPGGDTKLLGEKEI
                     QLFGTYEQAEQDMYYIGLAAQISAERASQENFQEEFEAQFAKYLEKKSITQEEYTFSY
                     TESAGTMTIIGTAAKDIVYEEENYRYSLTPNFRVSIPFEMEGFIP"
     gene            complement(5977..6519)
                     /locus_tag="VJJ79_02015"
     CDS             complement(5977..6519)
                     /locus_tag="VJJ79_02015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22524.1"
                     /translation="MLTRKGQVPEAVEIIGASIIIIIGVIVLLFANAEYQHSLENAKE
                     KYLPAKSLVEVLDVQFMGTDILNTMRLQITEEKTLGELFTALPEESSSLKEQGLIMDQ
                     VSLAALYECRESLQTTLQNFLGKTYGNKWAVTLMDQENIIFMCMAPGAIPTRPLSETY
                     MTVPSLDPEKDLTVLLEAYP"
     gene            complement(6513..6947)
                     /locus_tag="VJJ79_02020"
     CDS             complement(6513..6947)
                     /locus_tag="VJJ79_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22525.1"
                     /translation="MRKGQYTLGHKWVYFIVAIFLLSFMFLFLRSMFQEYQVQKTDCV
                     DPLLNEIIVAKILYAPGCFVAYDEELGRAMPGIIDSKKLTQENYENCFKYIDKRVKIT
                     LGDKSIGEEIESFVTISKPVFILQDGSLTPASMNIIMEATAC"
     gene            complement(6940..7290)
                     /locus_tag="VJJ79_02025"
     CDS             complement(6940..7290)
                     /locus_tag="VJJ79_02025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22526.1"
                     /translation="MDKKGQAETEQFFLFIEIILGILVAGIFIYNAANFDALSSVNKE
                     YAKQDLALLTETILASPGTVEYNYPLKASYNVKIDEGITITTSGDLTSAFEYENLIIT
                     KEQGSKTVTVERHA"
     gene            complement(7353..>7680)
                     /locus_tag="VJJ79_02030"
     CDS             complement(7353..>7680)
                     /locus_tag="VJJ79_02030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22527.1"
                     /translation="ILVSFKNGQDHPEEGDCDEAVDVPTSCGTVPCICLCSTRFSEYE
                     DACTKNSVECYAFTEQKEYMFSDALCDGGSLYREGASNGIFTLFYEKEGNTIKLCDGS
                     CEKPAS"
BASE COUNT         2098 a         1638 c         1569 g         2375 t
ORIGIN      
        1 agttcattct ttaatgcaaa tgaatatagc tgtgtgagaa agaaaaataa aagcaaaaga
       61 tagaagaagt tttcagagag aaaagaggca agcgaaatag aaagtgttgc acagaatgct
      121 gcgagtaccc ctgctgtcca catagaaatt tttccagatg ctaacggccg gtactttttc
      181 tcgggatgca ctttatcttt ttctttatct gcgatatcgt tcagaatata gtttgctgac
      241 gacatcaaac agagcgctac aaagccgagc gtcacgagaa aaaagctttt accgttggtc
      301 gcaagcccga caaagaataa cggcaaaaat ataatgaggt ttttgtacca ctggcgcata
      361 cggaagatat ctgtccacat ggggatgcag aaggggcaat gatttataat aactgtttct
      421 ctggattata caattcttgt catagccatt tgggagcgtc actcgcacaa caaactattt
      481 aaattctaat tttcgaattt tacacatgaa aagagtggtc ctcgtgtttc ttctgctgtt
      541 gcttctagga tgcgcggagg aaaaggccga agtaactcaa agtactatgg aatcaaaaac
      601 ttacgcaatc gtcgaaacaa gcaaggggaa ttttactatt cttctctatg aagacacacc
      661 cgtgacgacg gagaattttg tcacacttgc tcaatcagga ttctatgacg gactaacgtt
      721 ccatcgctat gagccagggt ttgtcataca aggcggagat ccgaatggcg acggaactgg
      781 aggaagtgct gaaaagattc ctttagaaat tgcgcaggga cggtcgcaca cacgaggaac
      841 gattggcatg gcacgaagcc aggacccgga cagtgcaagc tcccaatttt ttgttaatct
      901 cggcgataat tatttccttg atgggggtta tgctgtgttt ggggacgttg ttgaaggtgt
      961 ggatgttgct gacagcctcc gtgcaggcga tgtaatgaca aaggtttcta tcgtgcagaa
     1021 ataatatttg ctattctttg attcttacgc gtacccacca ggattcttcc tatgccagtc
     1081 ccatgcactt gcaatactct cactaagaga atactgaggt ttccagtcta actcttcttc
     1141 gatctttttt gcactggcaa caagcattgg cgggtctccc tgtcgctgct cacagacctt
     1201 tgttggaatc tggtgcattg ttactgcacg gcacatatca atgacttcat tgacgctatg
     1261 tcctgtgcct gtgcctagat tgtagacttt tgctttccct tcttcaagag actttagtgc
     1321 aagaatgtgt gcgtctgcaa ggtctagcac atgaatataa tcgcggatgc acgttccgtc
     1381 cggcgtcgga taatccgtgc caaaaaggtt tacagaatct ctctgcccta atgcaacctg
     1441 aagaacgaga ggaataagat gtgcctcggg cttatggtct tcaccaattc cgtacgctgc
     1501 gcctgctgca ttaaagtagc gcaatgaaac tgatgccaac ccgttgtttt gtgtgtgcca
     1561 ttctaggact tcttcgatga gactctttgt caggccataa gggttaatcg gtttcttttt
     1621 ctctgtctct gttattggta cttgcgatgg cactccgtac actgcgcatg tcgaagaaaa
     1681 aattatattt ttcacgccat gtttctgcat ctgatgaaaa aaacgaatgc tcttttccag
     1741 attgttctca aagtagagta ttggattttc taccgattcg ccaacgtatg caaatgcggc
     1801 aaagtgcatg actgcatcga tagaatagtt tgtgaaaata tcatcaagtg catcctttgc
     1861 agagatatct gcagcaatta gcggcacgtc accaggcact gcatctttgt tccctcgcga
     1921 aagattatct aggacaacaa catcatatcc gttctcacgc aaacgacgaa ccgtgacgct
     1981 gcctatgtac cctgctccgc cagtaactag gatagttttc atcgaacaat gtccggacgt
     2041 ccaattgcgt aatacgaaaa gtctgtttct tcttgcatct tttgatagtt cataaggtct
     2101 tttgcatcaa agataattct tctcctcatt ttttctctaa gttccgcaaa gtctggttgc
     2161 cgataagtta tccattcagt gataatcaaa aggccgtctg caccttctgt tgctgcatac
     2221 ttttctttgc atatttccaa atttgccata tcaacatcca tggctccaat ttctttcaag
     2281 aactccttag cagctttagg atcgtgagca cgaacatgtg cgcccatctg taataaatct
     2341 ggaataaccc ttaatgatgc tgcatcacga acatcattgg tatctttctt gaacgccaag
     2401 ccccataccg caagagtctg tccatccaag ctttctccgt acacttgttt cagcaaggga
     2461 ttgagagcgt gcttttgcgc ttcattctgg gctatgattc tttccaatac ttcgtaatct
     2521 tctcgcactg cacccgtatc tttcatcatc tgacaaagtg cggagacatc ttttttaaaa
     2581 cagctcccgc caaagcctag tcctggatga acaaatttcc caatacgagg atctgcacca
     2641 attgcctcca gtatctctct ccagtttgca ccgtatcgtt ttgctagatt tgcaaacata
     2701 tttgtgagta cgacctggct tgcaaggtat gtgttacagg catattttgt tagttctgca
     2761 ctttctggag acataaaaca gattcctttt tctccaggaa aaaagaaagg tgcatatagg
     2821 tctgataata ttcttcttgc tcgctcggat tctgttccaa cgataattct ttgcggttcc
     2881 tcagcatctt ttactgcttt tccttcagca agtgtttctg ggtttgatgc aacatcaaat
     2941 ttgcctactg catacgttcc aataatttct tctaaccgtt ttgctgttcc aacagggact
     3001 gtactttttg tcacaataag tttatacttt gcatcttcct tcattacttt gccaatggta
     3061 tgcgctgcag cgttgacgta tcgcacatcc gctcttcctt gtgcatcaga aggcgtgccg
     3121 acagtgagaa aaataacctc ggcgtcacta atcgcctgtt tgctatctgt tgtaaaccgc
     3181 aaaagccctt ctttgtatgc ttgttcaaga attgtaggta gtccttcttc atgaatggga
     3241 agactatttt ttttgccttc gcaaaaatcg ttaagtgcac taattttctt ctcgtcaaca
     3301 tcataaattg taacagaatt tcctttcttg gccatcattg cgccatagac aatgccgaca
     3361 aaccctgcac ctgcaaatgc taatttcatt atccttactc ctgagaatac gatttataat
     3421 gcttatgcag attaaataag aatattttgg taatgattgt taaagagatt ctacaaattc
     3481 tattttctgg acgtcggaca gacggcacgt gtgcgcgcaa gatatttaaa aaggtaatat
     3541 ctaatatagt cgatgactaa aaaatctatc ggaatccctg ttacagaagg aagaatactg
     3601 gaaagttctt gagtttgagt taacaagaaa agaaagtcta agaaaatcgg caaaagaatt
     3661 taatatgcct gtagaaacat acaggtcttg gatatacggc aaaaagatgc ctaatcagat
     3721 taagcaagat ttgaactctg gaagggtacc ggacaattac gaactccttc aaaatcaata
     3781 ttctttttta cctacaatac tttttagttt aaattaaaga tccattgata gcttctttac
     3841 atgaacattc tatgtattga atctttggaa caattgtttt aataagattt ttcactttct
     3901 ctgcattctc tttcattata cataatactt catcgagcgt tacaggagtt acatcttctc
     3961 gaaaacaatc ataatccgtc gacattgcga tcgaagcgta acacaaccct gcttcacgcg
     4021 ctaacacgac ttccggcact gttgacatgt tgataatatc tgcattccag cttcggaaca
     4081 tatgcgattc tgcctttgtt gaaaatcgcg ggccttcaat tgtcacgacc gttccttttt
     4141 cgtgatgggg gattgcaagg atgcgtgctg tttgtgcaca caatgctttc agtttcggac
     4201 agaacggttc tgccatagga atgtgacata ctctatttgt atcataaaac gtttgcgcac
     4261 gttttgtcgt tcgatcaatg aattggtctg ggaatactaa atgtcctgga gcaatatctt
     4321 cttttaatga ccctacggca gtcgttgcga ggatgtgcgt gcagccgagt tcttttagtg
     4381 cccagatgtt tgcgcggtaa ttgacatttg agggcataat ctggtgattt tttccgtgac
     4441 gagcgagaat aacaatatcg atgccgttta cttttccttt tgtcaatgat gaagaaggct
     4501 gaccgtaggg cgttgcgaca tcgaccactt cgtagttatc gagaagcttg ggatcgtcca
     4561 acccagaacc gccaattatt cctatcttaa tcatacgcct tcatttcttt cactagcttt
     4621 aaaagaattg cgtattttga gaaaatattc actaaccgca acagtcggca gctttataaa
     4681 taaaactttt ttgtaaaaga acaatggtac tcgaaaatag gtataggctt gttggaaata
     4741 ggaaagcaag aatactcttg tttcttggag gttgtgtgct cgataacgat aatgagaggg
     4801 gcagccgttt tgtaaaagat ccggatacct ttcttcgtgg atatggtttc cattaccact
     4861 ttcgtgatgt atcatgggtt gtgtatgaga aaaactttgg tccattagaa ggcgtgactg
     4921 tacgatttta ttcggaaagt gctaatggaa aaagggctat tgaaatccgt ggccttgaac
     4981 aagcggtcta tgatgaaaaa tattacatgg gtcttaacat tcaatagttt tataaaaata
     5041 agatctcttt tcttcttatg catccaacaa cactctcaaa gtatcctgga acacttgagg
     5101 accttgcaac agaagtcgct tctcttcgct acgataaagt cgctgaattt cttcattatt
     5161 taggagagga aatacgaaag cagagagacg cagatcgccg gcgtggaaga tctcgtcttg
     5221 catcacgact agaagagact gcagaaggac tctacaaggc acgagactgt ttcaaaagag
     5281 catgggacat ttgcaagccg tatgaacggt aagtttacag aaactcttat aaataatatt
     5341 ctagtttcat atgtgacaag gggcagtagt ttaacctggc tagaagctta acaggatagt
     5401 atcctaaaag ttggctgaag ctctcggctc cagaccgagg aatccagaag ggtgttacag
     5461 cagttcatcc tggatatgtt caaatcctgg ctgccccatt ttactctcca atacgtgata
     5521 agtttatgaa aagttttcaa ggaataaatc cttccatttc aaaagggata gacacacgga
     5581 aatttggcgt gagggaatag cgatagtttt cttcttcata gacaatatct tttgcggccg
     5641 taccaataat tgtcattgtc cctgcacttt ctgtgtatga gaacgtgtat tcttcttggg
     5701 ttatactttt cttttcaaga tattttgcaa actgcgcttc gaattcttcc tgaaaatttt
     5761 cttgtgatgc tcgttctgcg gagatttgtg cagcaagccc gatgtaatac atatcctgtt
     5821 ccgcttgctc ataggttcca aaaagttgaa tttctttttc accaagaagt ttcgtgtctc
     5881 ctcccggcgt ttgtttccct atgcttccgt aaaaggtgac aattgctatg ataaacgcaa
     5941 tcgcgcagat gtagaggaat accattgctt ttctgttcat ggataagcct ccaagagcac
     6001 tgtaagatct ttttctggat caagagaagg aactgtcatg tacgtttcac ttaaaggccg
     6061 cgtaggaatt gcgcctggcg ccatgcacat gaatataata ttttcctgat ccataagcgt
     6121 tactgcccat ttgtttccgt acgtcttgcc taaaaaattc tggagagtcg tctgcaagga
     6181 ttctctgcat tcgtagagtg ctgcaaggga aacttggtcc atgatgagcc cttgttcttt
     6241 tagcgacgac gattcttccg gaagtgcagt gaatagttcg ccaagcgttt tttcctctgt
     6301 tatctgaagc ctcatggtgt tcaggatatc tgtccccata aactgcacgt cgaggacttc
     6361 tacgagagac tttgctggca gatatttttc tttggcattc tctaaactgt gctggtattc
     6421 ggcgtttgca aagaggagca cgatgacgcc aatgataata ataatgctcg cgccaataat
     6481 ttctacagct tccggcactt gcccctttcg tgttaacatg ctgttgcctc catgatgatg
     6541 ttcattgatg ctggcgtgag actgccgtcc tgcaagataa agacgggttt gcttatcgtg
     6601 acaaaactct caatttcttc tccaatactt ttgtcgccaa gcgttatttt taccctctta
     6661 tcaatatact tgaaacaatt ttcatagttt tcctgcgtca actttttact gtcgataatc
     6721 cctggcattg cacgcccgag ttcttcatca tatgcaacaa aacagcctgg agcataaagt
     6781 atttttgcga caataatttc attgagcaag ggatcaacac agtctgtttt ttgtacctgg
     6841 tactcctgaa acatagagcg aagaaatagg aacataaatg agagaaggaa tattgcgacg
     6901 ataaaataca cccatttgtg cccgagggta tactgcccct tacgcatgtc tctccacggt
     6961 tactgttttg gatccttgtt cttttgtgat gataaggttt tcatattcaa acgctgaagt
     7021 gagatcgcca ctggttgtta tggtgatgcc ttcgtcaatc ttgacattgt agcttgcctt
     7081 aagggggtaa ttatattcca ctgtccctgg cgatgcaaga atggtttctg ttagcaatgc
     7141 gaggtcttgt tttgcatact ctttgttcac agatgacagc gcgtcaaagt ttgcagcatt
     7201 atagataaaa atacctgcaa caagtatccc aagaataatt tctataaaca ggaaaaattg
     7261 ttccgtctct gcctgcccct ttttatccat acaaaggaca aggacgtttc cctttaaaat
     7321 aattattgtt agaacagact tttggattct tcttaggaag cgggtttttc acagctacca
     7381 tcacataatt ttatggtgtt tccttctttt tcatagaata aggtaaagat accattggac
     7441 gccccttcac gatacaacga gccgccgtcg cataatgcat cgctgaacat atattctttt
     7501 tgttccgtaa atgcataaca ttctactgaa ttttttgtac aagcatcctc atactcagaa
     7561 aaccttgtac tacacaggca gatgcatgga actgttccac aagaagtggg aacgtcaaca
     7621 gcttcgtcac agtcgccttc ctccggatga tcctgaccat tcttaaaaga aacaaggata
//
LOCUS       DATDZU010000059         2125 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1539677, whole genome shotgun sequence.
ACCESSION   DATDZU010000059 DATDZU010000000
VERSION     DATDZU010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539677"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VJJ79_02035"
     CDS             complement(<1..447)
                     /locus_tag="VJJ79_02035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22528.1"
                     /translation="MERSIGDRNILDKFCTEFCSIVEKYAKYIIVSGFVAIAAGRTRA
                     TEDIDMIVERMSKKTFNKLHHDLVAHGFVCMQSDVADELFDDYLTKKANVRYTYKNKH
                     VPEMEVKFAKDELDMLQLQSRIKLPSTGLDVWFGIIEMNIAFKEDYL"
     gene            999..1991
                     /locus_tag="VJJ79_02040"
     CDS             999..1991
                     /locus_tag="VJJ79_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22529.1"
                     /translation="METTKNSYATEDIPKKVFMGFGYNGNLRREDQSWPSMERLDMLQ
                     YFAYMFALQQQGISWTIWDASSYQIVNVLPKKKVDSLGENPRAENVLDAILSEFERPK
                     RAEIRDNCKERLRNLCRFSLITGVEAPVYNTQDAFMYSCGLFTQALGSALEYVAKLKV
                     ENPDLVSRIQRNGNPGSWLYLPLEIAEAMFLETTFGVKGKFGPRSEQYFDECILGLQE
                     ERGIGYTALWCPLGPRPPGYLKQRDIQERATDAEISTKRVLLLCNWDKYYENLLADDN
                     PTEDQNSREYRMFVKSYLEPFRRERETTAECAIRLKGELGGRKESFFVKGDEQK"
BASE COUNT          714 a          421 c          451 g          539 t
ORIGIN      
        1 caaatagtct tctttgaacg caatgttcat ctcgataatc ccaaaccata catccaagcc
       61 cgttgatggt aatttgatac gggattgtaa ctgcaacata tcaagttcgt cttttgcaaa
      121 cttcacttcc atttcaggca catgcttatt cttgtacgta taacgtacat tagctttttt
      181 cgtaagatag tcatcaaaga gttcatcagc aacatccgac tgcatgcaga caaaaccgtg
      241 tgcaacgagg tcgtgatgaa gcttgttgaa cgttttcttg ctcatacgct ccacaatcat
      301 gtcaatgtct tcagtcgcgc gtgtcctgcc cgccgcaata gccacaaacc ctgatacgat
      361 gatatatttc gcatattttt cgacaattga gcaaaactca gtgcagaatt tgtccaagat
      421 gttcctatcg ccgatagagc gctccatgaa gaggatgaga acatgaggtt atttataggt
      481 aacggcgaaa atgaagaaaa agtaatcaca gaatcactca tacaaaattt catcaacctg
      541 ttcgctgata tgctctgaac cttttcccca ttttgtcggc ttgaaatctg taaacttttt
      601 cttctgagta agctctgctt tgaacgtcat tacaacaagt aaaacaaatg aagataaaaa
      661 gttgatgtca ctcaccagag attacaaaca aaaagtttaa atagaagcta cgtttctatt
      721 gggttatgac acgagttgat tatcttcaca gtgagtgaac agatacttct caatagtttt
      781 aactttaaat taagtgattg tcttcatcga tagttcaatc tcttttaaca ccgttggtga
      841 ttttcttcat cgtcagagac acttctaaag aaattcttat tcaacaaaaa agccgcacgg
      901 gctcaaaacg tgggagaatg aaatgaaaca aagagaaaca aggaagcaag tagtggaggc
      961 acaggcacga gagcgcgctg atcgtcttca cgtttgaatt ggagacaacg aaaaatagct
     1021 atgcaaccga agatattcca aaaaaagtct tcatgggatt tgggtacaac ggtaatttac
     1081 gaagggaaga ccaatcctgg ccatcgatgg aaagactgga catgttgcaa tatttcgcat
     1141 acatgttcgc actccaacag caaggcattt catggacgat ttgggatgca agcagttacc
     1201 aaatagttaa cgttctccca aagaaaaaag tagatagtct tggtgaaaat ccacgcgctg
     1261 aaaatgttct tgacgcaatt ttaagtgaat tcgagcgacc aaaacgagca gaaattcgtg
     1321 ataactgcaa agagaggcta aggaacctat gcagattcag cctgataaca ggagtagagg
     1381 ccccagtata taatacacag gatgccttca tgtattcgtg cggattattc acacaagcgc
     1441 ttggcagcgc acttgagtat gttgcaaaac taaaagtaga aaatcctgac ttggtaagca
     1501 gaatacaaag aaatggaaat cctgggagct ggctctatct tccgttagaa attgcagaag
     1561 ctatgtttct tgagactaca tttggagtaa aaggcaaatt cggcccaaga agtgaacaat
     1621 acttcgacga atgtattctc ggactgcagg aagaacgagg gataggctat acagcattat
     1681 ggtgtcctct tggaccacga ccaccaggtt atctcaaaca gagagacatt caagaacggg
     1741 caacagacgc ggaaatatcg acaaagaggg tcctcttgct atgcaattgg gacaaatact
     1801 atgaaaatct tcttgcagac gacaacccaa cagaagacca aaatagcagg gaatacagga
     1861 tgttcgtcaa aagctatctt gaaccgttca gaagagaaag agaaacaact gccgaatgtg
     1921 caattcgtct gaaaggcgaa cttggaggaa ggaaagagag cttctttgtt aagggagatg
     1981 aacaaaaatg aaatcgaaat acaaaacgat aggcatcttg ggagggatgg gtccagaagc
     2041 aactgcagac ttgtatatga aaatcattag aagtttccag gtaaaattcg gagcaaaata
     2101 cgacagtgac ttccctccga ttgtc
//
LOCUS       DATDZU010000060         2618 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_759270, whole genome shotgun sequence.
ACCESSION   DATDZU010000060 DATDZU010000000
VERSION     DATDZU010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759270"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VJJ79_02045"
     CDS             complement(<1..829)
                     /locus_tag="VJJ79_02045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22530.1"
                     /translation="MSEQIKDAANNIIRIGDKFEKETFRYRKLFLLNQILLEIEKIEN
                     VFAKKKEHTVSWTERKRLLRELRIDPVHLEEAMEHKDIKEFYNGSMYGKIANFFFEPI
                     TKKVMHIFPQFTDRMHQQLMSSGMQILSNTYLSMLLFTSFLLLFVGSSLGVVIFYATS
                     YAAGFFLGFVLAIISMLAFSLYPVYATMQRKKDLKKEYPFIVTHLAAIASTDIRSLPM
                     FKALMKTKYSKSILLDANRVVNYVTIFGYSLPDSLKMTAANVPAKEICDLLIELAQKI
                     "
     gene            complement(822..959)
                     /locus_tag="VJJ79_02050"
     CDS             complement(822..959)
                     /locus_tag="VJJ79_02050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22531.1"
                     /translation="MSIAVIKQQAQAIIDISYKENDKDTILHLAKTIKDKVLEERKKY
                     V"
     gene            complement(956..2230)
                     /locus_tag="VJJ79_02055"
     CDS             complement(956..2230)
                     /locus_tag="VJJ79_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22532.1"
                     /translation="MELFSTINRKHSETNSQKGLFRLENTRQISPLAKTLSDEPVIYE
                     IIGNVVTASITQRYYSIQEPELTDHEQNIFEQLIRGLYEVMNMGPSDNPEAYLEKCTH
                     VILAELNISISEDELQKILYYIYRNIVGFEKIEALLRDQMVAEIRYAGKSEPVEIVHR
                     KYGKLHTDILLKPEEISTIIRKLLLGCDKELSTTKSTVECQFNDYFLMTSYVQENPSH
                     SQFWIKKKIFPYLSLAEVIKQKKVPAEVLAFLWLLLENKTNIFICKDRTLLNLMSYFI
                     PAQAKVFTNIPFHYPNPLTITYVGETSAQEDYALIDNYMNQPINGTLIASVETINETN
                     KVVCYMEEGTFKKVVENGKEIFGVTQKLGTHLNESMFLRSKGATVVEELRARTRLIMA
                     VAKSNINEDDRKKIFAMYYNNPEAVLKRAGMA"
     gene            2321..>2618
                     /locus_tag="VJJ79_02060"
     CDS             2321..>2618
                     /locus_tag="VJJ79_02060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22533.1"
                     /translation="MEDALAQRKTKVVQYLKQKKIWLVYFVLAFIAGVGYYIRTRNLS
                     LLIDATTGNYFPSDPDAIGILRYVQYIVEHGRLMDIDYLRFYPSGFGGTVGSLNE"
BASE COUNT          655 a          509 c          561 g          893 t
ORIGIN      
        1 ctattttttg tgcaagctca attaacaggt cgcaaatttc ttttgctggg acattggctg
       61 cagtcatctt caatgaatca ggaaggctgt atccaaaaat cgtgacgtag ttcaccacgc
      121 ggtttgcgtc taacaggata cttttagaat atttggtttt cattagtgct ttgaacatgg
      181 gaagactgcg tatatcggtg cttgcaatgg cagctaggtg cgtgacaatg aaggggtatt
      241 ctttctttaa gtccttcttt cgttgcattg ttgcatatac aggatagagt gaaaaggcaa
      301 gcatggaaat aatcgcgagt acaaaaccca gaaaaaaacc tgcagcatag gacgttgcat
      361 agaaaatgac gacgcccaac gagctgccaa cgaataacag cagaaacgat gtgaacagga
      421 gcatgctgag gtacgtgttc gaaagtattt gcatgcccga ggacattaac tgttgatgca
      481 tacggtccgt gaactgcgga aaaatgtgca tgaccttttt ggtgataggt tcaaagaaaa
      541 agtttgcaat ctttccgtac atgctgccat tgtaaaactc tttgatatct ttatgctcca
      601 ttgcttcctc taaatggaca ggatcgattc tgagctccct caagagacgc ttgcgttctg
      661 tccaggaaac tgtgtgctct tttttctttg caaacacgtt ttcgatcttt tctatctcta
      721 gaagtatttg attcaggaga aacagttttc tatatctgaa cgtttctttt tcaaacttgt
      781 ctcctatccg gataatatta tttgctgcgt cttttatttg ctcagacata ttttttcctc
      841 tcttcgagaa ctttatcttt tattgttttt gccagatgga gaattgtgtc tttatcattt
      901 tccttgtagg atatatcaat gattgcctgt gcctgttgtt tgatgaccgc gatgctcatg
      961 ccatacctgc ccgtttcaat actgcctctg ggttgttata atacatcgca aaaatctttt
     1021 tcctgtcgtc ttcattgata ttgcttttcg caacggccat aataagccgt gtgcgtgcgc
     1081 gtagttcttc cacgactgtc gctccctttg agcggaggaa catactctcg ttgaggtggg
     1141 tccctagttt ctgcgtgacg ccaaaaattt cttttccatt ctcgactact tttttaaacg
     1201 tgccttcttc catgtagcag actaccttgt ttgtctcgtt gattgtttct actgatgcaa
     1261 tcagcgttcc attgataggt tggttcatgt aattatcgat cagtgcgtag tcttcctgtg
     1321 cactagtttc tcctacgtat gttatcgtta atggattggg gtaatggaaa ggaatgttcg
     1381 tgaacacctt tgcctgtgca ggtatgaagt aactcatcaa gttgagtagt gttctgtcct
     1441 tgcaaatgaa gatgtttgtt ttgttttcaa gtagcaacca aaggaacgca agcacttccg
     1501 cggggacttt tttttgtttg attacttcgg cgagtgaaag atacgggaag atttttttct
     1561 tgatccaaaa ttgggaatgg ctcggatttt cttgcacata cgacgtcatt aggaaatagt
     1621 cattgaattg acactcgacc gtggatttgg tagtactgag ttccttgtcg cagccgagca
     1681 aaagctttcg aataattgtg ctaatttctt ctggtttcag tagaatatct gtgtgaagtt
     1741 ttccatactt tctatggact atctctaccg gctcactttt tcccgcatat ctaatttctg
     1801 ccaccatctg gtccctcagt agcgcttcta ttttttcaaa gccaacaatg tttcgatata
     1861 tgtagtaaag aattttttgc aattcgtctt cagagatgga gatgttaagc tctgcaagga
     1921 taacgtgcgt acacttttcc aaatatgctt cggggttgtc agacgggccc atgttcataa
     1981 cttcataaag cccgcgtatg agctgttcga aaatgttttg ctcgtggtct gtcagctctg
     2041 gctcttgaat tgaatagtac cgttgcgtta tgcttgcggt caccacgttt ccaataattt
     2101 cgtagatgac tggttcatcg ctcaatgttt ttgcaagagg agaaatttgt cgtgtattct
     2161 ctaaacgaaa tagtcctttc tgggaattag tctcagaatg ctttctatta attgttgaga
     2221 aaagttccat cctctaagga atagatcttc ctttcttaaa taccttttcg ctcagaaaat
     2281 tacaaaaatt atataaacta cttgaagatt ggtacgggga atggaggatg ccttagcaca
     2341 gaggaaaaca aaagtagtgc agtatctcaa gcagaaaaag atctggcttg tgtactttgt
     2401 tcttgcgttt attgcagggg taggatatta tatccggaca cggaatttat ctcttttaat
     2461 tgatgcaacg acagggaatt attttccttc tgatcctgat gctattggta tcctacgcta
     2521 tgttcaatat attgtggaac atggcaggct tatggacatt gattatcttc gtttttatcc
     2581 ctcaggattt gggggaacag tcgggagtct taatgagt
//
LOCUS       DATDZU010000061        11530 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1296994, whole genome shotgun sequence.
ACCESSION   DATDZU010000061 DATDZU010000000
VERSION     DATDZU010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 11530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11530
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1296994"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="VJJ79_02065"
     CDS             <1..1033
                     /locus_tag="VJJ79_02065"
                     /inference="COORDINATES: protein motif:HMM:NF033587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HLC22534.1"
                     /translation="NISGWNCECQDFQNRHANCKHIHAIKLWIKLRAKPEIEELEIDT
                     NEEKCIYCNSLNIVKNGARKTAIENKQRFKCKDCEKRFVLDPVKRIKGNGKIVTLAMD
                     LYFKGLSLRDISDTLYQFYNLRVHFDTIRRWISKYTQIMDNYTKDFKPELSDKWHIDE
                     QMIKSKKDYIWCWNVLDSETRFLIANNVTRGREIKDARAVLKIAKENIKENPKEIVTD
                     GLWSYNRSIRKEFVTKRTSPNAVLHSRNAGIAKKLLNNNMVERYHNEFREFDKVRRGF
                     KSDETAQQWSDAFRLYHNFIKKHMALNGATPSQVAEIDIELGRNRWLSLLKQSLNHPN
                     TTKKEVILK"
     gene            1098..2609
                     /locus_tag="VJJ79_02070"
     CDS             1098..2609
                     /locus_tag="VJJ79_02070"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HLC22535.1"
                     /translation="MEEKSMKTIARGALILFAGALLGKTFSFVYRIILSRLGEQAYGE
                     FALGLALFGILGVISILGLDTGTLKFVSVFRAEKNESKIKGTILYSSKIVFLLSIVCG
                     TILFLSSDWIATTFFHTERLGLIIKILALALPFEGLRTILSNSLKAFKRIDYEVYGRI
                     LGENFIKIVFSVLFITLGLDVIGAALAYSLSIVLSFFALFYLFNKKTFPLLSKNILAV
                     TESKQILMYSIPLVLNSLTLMVIAWADSLMLGYFMDTGTVGVYNVADPAAKLILIFPT
                     AFAALYLPLIAEVHVNKEEFKKVYLTTTKWIFLINSMALAWILLYSKDLITFFFTETY
                     IAATGPLSILIIGYFINGAVYTSRDILLLRDKTKHILQATIACSLTNIIFNLYLIPRY
                     GMIGAAIGTTSSLIILSALLFINTQKEIQINPFTKKIGAIIIVTALAAGITKFITNIF
                     GFKSLILTIIVSLVLLPLLSLTMFAVVGLLEKEDKEIFAILWQKVSNMMQWKK"
     gene            2570..4492
                     /locus_tag="VJJ79_02075"
     CDS             2570..4492
                     /locus_tag="VJJ79_02075"
                     /inference="COORDINATES: protein motif:HMM:NF028199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alginate lyase family protein"
                     /protein_id="HLC22536.1"
                     /translation="MAESKQYDAMEKVKNILYRVQKNPETLHIKATRFVKRKILQNIR
                     GRYIERYPYTPSLEDTKRLLGVKKLVINEIPFFLNPEIKYMESIKEANQIINGEYEIL
                     GRMHKFNKINWHQDVFSSKVWKKKHFSRITYDDENSDKKVPWELSKFQHITTLGLAYQ
                     QTKDKRYAQVFQAQVEDWIKENLYEIGINWVTPMEAAIRAVNWINGYYFFKETLPKEF
                     LEKYITQLYLHGKFIEENLEWSPKKENHYLSDMLGLFFLGIFFKHTKKGKKWILFAKK
                     EFEKEIIRQVSDEGVDYEGSLNYHRLVTELFILAYINGRRNNITFSGTFVQRIEKMCE
                     FILWYTTPTGQAPSIGDTDNGRILNIWNKDINDHRDILAVAAALFRRGDFKAHGTFHT
                     KLHLLIDKKEYEAISKRNVSLTSRRFNDYYIMRDEDIYLLIHCGDIGREGFGGHGHND
                     QLSFVFSTKNKDYIIDAGTYAYTSNHSMRHSFRSTASHNTLIVNKMEQNPIQAERPFD
                     MDHKTQARCTAWNIGKEHEQFIGTHKGYAPFIVTREILYDKKKKEIRIKDKTNNEADL
                     ELNIHFNKGVNVKKEDNRILLGKEIEMETGPAEIIPSIYSPSYGIKEENKRLRIQKHG
                     KELITVIKLKQQVQDI"
     gene            complement(4461..5543)
                     /locus_tag="VJJ79_02080"
     CDS             complement(4461..5543)
                     /locus_tag="VJJ79_02080"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22537.1"
                     /translation="MDDIPFKIFTSTFHKKFMIYGKNLTLRRLMNYSLVYASLKLKQP
                     RVWGKPLSLFIEPTNICNLKCPLCPTGNNSVPKSKGYMQFDHFKHVIDTLGPTALSVT
                     LWNYGEPFLNKQSFDMIRYAKLKGLKVITSTNGFVFKNKENIDRIIDSGLDEIIFAVD
                     GASAETYNKYRINGNFDELIEGIKLLAEEKKRRKSFFPYMSMQFIIMKNNEHEVEDIQ
                     KLAKEIGVDELILKTVYLFNDAEMAEKYLPHNKKYSRYLTDEGVACKTSIRPGCDGLW
                     IGVNINYDGTIVPCCFDTHEKFKFGNIVDTKDFMNEIWNSKKFIAFRKNVWEDKGSVE
                     MCKNCPTNTESQDYARIKYPELVAST"
     gene            complement(5560..6657)
                     /locus_tag="VJJ79_02085"
     CDS             complement(5560..6657)
                     /locus_tag="VJJ79_02085"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLC22538.1"
                     /translation="MDVVVFSECPTKDYYRSLMRLEEQGKIELEFMDSRLLYLLALKL
                     YGSLYPLRYLVHMFFKKPLDVRHVCLMKEIFPSFFAYLTLPFTKKTIVVLFAPYSPTV
                     VYLWLLRKMKRKVLYMTSWPFWDGKRYAHVPSFLRMYFWNAFLYDVPAVTISQKAREG
                     VMMYGHRVVQIPHGVDISLFTPGKKKEDFTVLFVGRLVPEKGIDDLLAVARDLPAISF
                     IFVGAGPLAEKLRTCGLPNVQYLVEIRDRERLARLYRESHVFVLNSYALPHWEELFGI
                     VLLEALASGTPVISTDCVGPKEIVKPEFGFLIPQHNNEALKEKILFFSTHPKEVQKMG
                     LQGRLSVEKRYNLDTMARLWHEVLMEKIFKL"
     gene            6712..7368
                     /locus_tag="VJJ79_02090"
     CDS             6712..7368
                     /locus_tag="VJJ79_02090"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLC22539.1"
                     /translation="MVVDYTTFKDYKEQPFKWKFWAHVIRKKTRAMDHILELGCTHGY
                     IFSYLKEYKNKSGVDISHAAIEHAKKINPLANFSVMDAEKLAFEDEAFQLVLCIDMIE
                     HVKNPEACIQEAYRILKKGGYVIITTPNPESYSRKKKGLKWFAFQDPTHISIYEIKKW
                     TELLEKNNFVIENATTIDLFDMPYFSKWFQGINWFLYTIRHPFIPRYGDNSVFIARKR
                     "
     gene            complement(7365..8690)
                     /locus_tag="VJJ79_02095"
     CDS             complement(7365..8690)
                     /locus_tag="VJJ79_02095"
                     /inference="COORDINATES: protein motif:HMM:NF012912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HLC22540.1"
                     /translation="MLTVVVGTQFGDEGKGAITHRLSLDEHIVAGARAQGANNAGHTI
                     HPEELPADAEPYKLHLVPSSVIAGKRGYIGRGCAVDLDVLVDEIQKLKLRGLSPDIVL
                     DPCAHVILPWHKELDGLNDSAQGNFSAGSTRRGVGPVYGAKHERWGVRVVDLFEDPKR
                     VEQVQEHYLERRAPGLFNWFTRRTLQKSYRQMLETSKDRFLPYYEQIVSDVALKIEGL
                     LREGKGIIGECAQGEMLDVNNAYYPRGTSSETNAPGIWVGLGIGPRSEYLGPVHGVAK
                     AYVSRVGNGPFLTELIGDAEDFLREKGKEFGTTTGRPRRVGWFDAHMVRVANRASGIT
                     GLAVTKIDILGGMDTIKLAYDYKTPFSKFLGNGVLPVDYNLCVPLYETFQGWPDFTEE
                     EYRRQFADGIDGIKDSNLKIYLKAIEATTDLPIHMVSFGPKSDAFVSYI"
     gene            complement(8730..9362)
                     /locus_tag="VJJ79_02100"
     CDS             complement(8730..9362)
                     /locus_tag="VJJ79_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22541.1"
                     /translation="MQITIPIFLIFLLLIPSALAGNSYDTDFSEIPTQAILLYEHDEV
                     RFSILGGEHMIIIEDVGKASVKLDIGAFIGNNTELWPGLVGFDTINKIDLDKDGTDDL
                     GIALYGIAEDGQVHLVLQDLTQKTDQEVTGDVPAAGKLDDTFSYRNVLLALIGVLILA
                     VVVALVFRNTKGNSSDTGESEEKTVELPDEVEQALKEDDVVPEVQEDYGK"
     gene            complement(9429..11099)
                     /locus_tag="VJJ79_02105"
     CDS             complement(9429..11099)
                     /locus_tag="VJJ79_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22542.1"
                     /translation="MNRVFKFLIISLLLVIGLYGGYVLAVNPAHLVNHISPVNATYAT
                     NGSAGLLNFIINSSTSNFTANFTGRINTTNGSSVLVQLLMQLGGDNGSRASNNSNVNG
                     SILYLGTAVAVNDTNTSGVSNTFSIVSNKSLPDGNHTWYFNASIANAGESFTSNMSGA
                     NFTIVIDNSRPLLAYLSDTETNNSNLTTRDNIVVNVSVYEWNIANVTIYIQNGSAIAS
                     GNTTPGFNKTTFAAGPRESGNLSSQYMNFSLLADGNYTLNVTTTDLFNNINRSGNRII
                     NIDRTVPVITHTTTPTDALLGDIVTLVCTATDNLDGSPVMSLELKRPTQSSYTVLSSQ
                     AQSAYKYATIESGTHSVRCTATDYAGKSTSSTKTFAVAGSGEGSADSGGAAGGSSGSG
                     GSGGEVTPEEVVPEEQAKEVAVPIANVDTWETEGSVSYIDVSVGKLYTFEFVDATKQV
                     ANHTIEVTDVNEEQGYVIFLVQSDAQEVTVLVGEGKEVDLDQDGFSDLLITVNGITAG
                     VADVSFAKVGTWREISGEEKGLSLRVWVVVAVLVLSLGLGTYWYFRRI"
     gene            complement(11194..>11530)
                     /locus_tag="VJJ79_02110"
     CDS             complement(11194..>11530)
                     /locus_tag="VJJ79_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22543.1"
                     /translation="VDASGEVAAHSIEVKELNEADGLAVFIVQSDAQEVQVAVGESKE
                     VDLNGDYVSDLLITLNGISDGVADVSFAKAGTWKEVPAQAAVSYTWLWVILALVVVAL
                     VVYWSMRRK"
BASE COUNT         3856 a         2459 c         2083 g         3132 t
ORIGIN      
        1 taatatttct ggatggaatt gcgaatgtca agactttcag aatagacatg ctaattgcaa
       61 gcatattcac gccattaagc tctggattaa attaagagca aagccagaaa ttgaagagtt
      121 ggaaatagat acaaacgaag agaaatgtat ctactgcaat tctcttaata ttgtaaaaaa
      181 tggagcaaga aaaacagcaa tagaaaacaa gcaaagattc aaatgcaaag attgtgaaaa
      241 gagatttgtt cttgatcctg taaagagaat taagggcaac ggtaagatag taactttagc
      301 catggatttg tatttcaaag gattatcctt acgagatatt tcagatacgc tttatcagtt
      361 ctataatttg agagtgcatt ttgacactat cagaagatgg attagcaaat acacgcaaat
      421 aatggataac tacactaaag atttcaagcc agaattaagc gacaaatggc atattgatga
      481 gcagatgatt aaatcaaaga aagattatat ctggtgctgg aatgtattag acagcgaaac
      541 aagattttta atagcaaaca atgtaacaag aggaagagaa attaaagacg caagagcagt
      601 attaaagata gcaaaggaaa atattaagga aaatcctaaa gagattgtaa cagatggtct
      661 atggtcttac aatagatcaa tcaggaaaga atttgtcaca aaaagaacaa gtccaaatgc
      721 tgttcttcat tcaagaaatg caggaatagc aaagaaactt cttaacaaca atatggttga
      781 acgttaccat aatgagttta gagagtttga caaagtaaga agagggttta agtcagatga
      841 aacagcacag caatggagcg atgcatttag gctttatcat aatttcatta agaaacacat
      901 ggctctgaat ggagcaacac cttctcaagt agcagagata gatatagaat tgggcagaaa
      961 cagatggtta agtctgctca agcaaagcct caatcacccg aatacgacaa aaaaggaggt
     1021 aatattaaaa tgacccttta atacgacaga gagttaatga ataacgtttt taaacacact
     1081 ttcttcctca cagtcaaatg gaagaaaaat cgatgaagac gattgcaaga ggggcactga
     1141 ttctttttgc gggggccttg cttggaaaaa cattttcgtt tgtctaccgc attattcttt
     1201 cacggttagg agaacaagcc tacggagaat ttgcactcgg ccttgcactt ttcggcatcc
     1261 taggtgtaat ttctattctc ggtctcgata caggaacact aaaatttgtc tcggtatttc
     1321 gcgcagaaaa aaatgagagt aagatcaagg ggacaatcct atattcctca aaaattgtat
     1381 tccttttaag catcgtatgt gggactatac tctttctctc ttcagattgg attgcaacaa
     1441 ctttttttca tacagagcgc ttagggttaa tcataaaaat attagcatta gcattgccat
     1501 ttgaggggct ccggacaatc ctcagcaatt cactcaaagc attcaagaga atcgattatg
     1561 aagtttacgg tagaattctt ggagaaaact tcataaaaat tgtcttctct gtgcttttta
     1621 ttacattggg attagatgtc attggtgcag cacttgcgta ctcactatcg atagtcctta
     1681 gtttctttgc tttgttctat cttttcaata aaaaaacctt cccactattg agcaaaaata
     1741 tacttgcggt aacagaaagc aaacaaatcc ttatgtattc aattcctctt gtattaaaca
     1801 gcctcaccct tatggtgatt gcctgggcag acagcctgat gctgggatat tttatggaca
     1861 cgggaacagt cggcgtatac aacgttgcag accctgcagc aaaactcatt ctcatttttc
     1921 cgacggcatt cgcagcactc tatctcccgc tcatcgctga agtgcacgta aacaaagaag
     1981 aattcaaaaa agtataccta acaacaacaa aatggatatt cttaatcaat agcatggcac
     2041 ttgcgtggat ccttctctac agtaaagatc tcatcacatt ttttttcaca gaaacgtata
     2101 tcgcggcgac aggtccactg agtatcctca tcataggata tttcatcaat ggagcagtat
     2161 atacctctcg agatattctt ctgctaagag acaaaacaaa gcatatccta caggcaacta
     2221 tcgcgtgcag tctcacgaac attattttta atctctatct tattccaaga tatggcatga
     2281 ttggcgccgc tattggaaca acaagttccc taataatact cagcgcattg ttattcataa
     2341 acacgcaaaa agaaatacaa ataaatccgt ttacaaagaa aattggtgcg attattattg
     2401 tgacagctct tgctgcagga atcacaaagt ttattacaaa catctttgga tttaaatcac
     2461 taattctgac aatcatcgta agcctcgtgc tacttcctct gctcagcctc accatgtttg
     2521 ccgttgtagg acttttagaa aaagaggaca aagaaatatt tgccattttg tggcagaaag
     2581 taagcaatat gatgcaatgg aaaaagtaaa aaacattctt tacagagtac aaaaaaaccc
     2641 tgagacatta catataaaag caacacgatt tgttaaaaga aaaattcttc agaatattag
     2701 gggacgttat atcgaaagat atccctacac tccatctctt gaagacacaa aaagattgtt
     2761 gggcgtaaaa aaacttgtaa tcaatgaaat acccttcttt ctcaatccag aaataaaata
     2821 tatggaaagc atcaaagaag caaatcaaat tattaatggt gaatacgaaa ttcttggaag
     2881 gatgcacaaa ttcaataaaa ttaactggca ccaagacgtt ttctctagca aagtttggaa
     2941 gaaaaaacat ttttcacgaa taacatatga cgatgagaat tctgataaga aggtgccgtg
     3001 ggaactcagc aaattccagc atataacaac gctcggactt gcatatcaac aaacaaaaga
     3061 caaaagatat gcccaagtat ttcaagcaca agtcgaagac tggataaaag aaaatctgta
     3121 cgagatagga ataaattggg tgacaccaat ggaagctgca attcgcgcag tgaattggat
     3181 taacggctat tacttcttca aagaaacatt gccaaaagaa tttttagaaa aatatattac
     3241 acagctctat ctccatggca aatttatcga agagaatctg gaatggagcc caaaaaaaga
     3301 aaaccattac ctctcagaca tgctgggctt gttcttcctc ggaatttttt tcaagcacac
     3361 taaaaaagga aaaaaatgga tactgtttgc aaagaaagaa tttgaaaaag aaattattcg
     3421 ccaagtttca gacgaaggag ttgattatga agggtcatta aattaccata gacttgtcac
     3481 ggaacttttc attctcgcat acattaatgg aagaagaaac aacattacat tctcaggcac
     3541 atttgtccaa agaatagaaa aaatgtgcga atttattctg tggtatacaa caccaacagg
     3601 acaagcgcca tctatcggcg atacagacaa tggcagaata ttgaacatct ggaacaaaga
     3661 tatcaacgac catagagaca ttcttgcagt tgcagcggca ttgtttagaa ggggagactt
     3721 taaggcacac ggaacgtttc ataccaagct ccatcttctc attgataaaa aagaatacga
     3781 agcgatatct aagagaaatg tttctttaac ctcacgaagg ttcaatgact attatatcat
     3841 gagagacgaa gatatctacc tcctaatcca ctgtggagac ataggaaggg aaggatttgg
     3901 tggtcacggg cataacgacc aactcagctt tgtcttcagc acaaaaaata aagattatat
     3961 tatcgacgct ggaacatacg catacacatc taaccacagt atgcgccaca gttttcgttc
     4021 gacagcatca cacaacactc tcatagtcaa caaaatggaa caaaatccaa tacaagcaga
     4081 gcgaccattt gacatggacc acaaaacaca ggcgcgatgc actgcatgga acataggaaa
     4141 agagcatgaa caattcatag ggacgcataa aggctacgca ccgttcatcg tgacaagaga
     4201 gattttatac gataaaaaga aaaaagaaat aagaatcaaa gacaaaacaa acaacgaagc
     4261 agatctcgag ctcaacatac atttcaacaa aggagtaaat gtaaaaaaag aagacaaccg
     4321 catcctcctc ggcaaagaaa tagaaatgga aacgggacct gcagagatta ttccgtcaat
     4381 atactcacca agctacggaa taaaagaaga aaacaagaga ctcagaatac aaaaacacgg
     4441 aaaagaatta ataacagtta tcaagttgaa gcaacaagtt caggatattt aatacgtgca
     4501 taatcctggc tctcagtgtt agtcgggcaa ttcttgcaca tctcaacgct gcctttatct
     4561 tcccacacat tctttctaaa cgcaataaac tttttgctgt tccatatctc gttcataaaa
     4621 tcttttgtat cgacgatatt tccaaattta aacttctcgt gggtatcaaa acaacatgga
     4681 acaatcgtgc catcgtagtt tatgttcacg cctatccaaa gtccgtcaca gccaggtctg
     4741 atggacgtct tacacgcaac accttcgtca gttagatatc gcgaatattt cttgttatgg
     4801 ggcaaatact tttctgccat ctctgcatca ttaaaaagat atacagtctt caggatcagt
     4861 tcatcaacac caatttcttt tgcgagcttt tgaatgtcct cgacttcatg ttcgttgttt
     4921 ttcatgataa taaactgcat gctcatgtag ggaaagaaac tcttccgccg ttttttctct
     4981 tcggcaagaa gcttgatccc ttctatcagc tcgtcaaaat ttccattgat acgatattta
     5041 ttgtatgtct ctgcacttgc accatcaaca gcaaagataa tttcatccaa accagaatcg
     5101 atgatcctat caatgttttc cttgttcttg aacacaaacc cattcgtgct tgtaatgact
     5161 ttcaagcctt tcaactttgc ataccgaatc atgtcaaatg attgcttatt taagaacggc
     5221 tcgccatagt tccaaagcgt cacagaaagt gcagttggac ctaaggtatc aatgacatgc
     5281 ttaaaatgat caaactgcat atatcctttt gactttggca cagaattatt ccctgtagga
     5341 cataacgggc atttaagatt acaaatattt gtcggttcaa taaacaggga aagaggtttc
     5401 ccccataccc tgggctgttt gagcttgaga gaagcataaa caagagaata attcattaaa
     5461 cgccgcaaag ttaaattttt tccgtaaatc ataaattttt tatgaaacgt gctggtgaat
     5521 attttaaaag ggatatcgtc catcagagcc cgcaacgtat tacaatttaa aaattttctc
     5581 catcaacact tcatgccaaa gccgtgccat ggtatccaaa ttataccgct tttcgacgga
     5641 cagtcgcccc tgcagcccca ttttctgtac ctcttttgga tgggtagaga agaagagaat
     5701 cttttctttg agagcttcat tgttgtgctg ggggatgagg aacccaaact ctggtttaac
     5761 aatctccttt ggaccaacac aatcagtact gataacaggt gttccggaag caagggcttc
     5821 aaggagaaca atcccgaaga gctcttccca gtgagggagc gcataagaat ttaacacaaa
     5881 tacatggctt tcacgataca aacgtgcgag acgctctcga tcacgaattt ctacaaggta
     5941 ctgcacattt ggtaagccgc acgttcgcag tttttccgct agtggcccag caccaacaaa
     6001 aataaaagat atcgccggta aatcacgtgc tacggctaac aaatcgtcaa ttcctttttc
     6061 tggaacaaga cggcccacaa aaaggacagt aaaatcttct ttcttttttc cgggagtaaa
     6121 cagagaaata tcaacaccat gaggaatttg cacgacgcga tgaccgtaca tcatcacgcc
     6181 ttctcttgct ttttgtgaaa ttgtcacggc aggcacgtcg taaagaaacg cattccaaaa
     6241 atacatacga agaaaagacg gcacatgcgc gtaccgtttc ccgtcccaga aaggccatga
     6301 ggtcatgtac aaaactttac gcttcatttt tcgtaaaagc caaaggtaca cgacagtcgg
     6361 actatacggg gcaaacaaca caacaatggt ttttttggta aatggaagag taagatacgc
     6421 aaagaacgaa ggaaagattt ctttcataag acaaacatgt cgtacgtcta acggtttttt
     6481 aaaaaacata tgaactaggt accgtagtgg atacagagac ccgtatagtt taagtgcaag
     6541 aaggtacagc agccgcgaat ccatgaactc aagctcgatt tttccttgct cttcaagacg
     6601 cataaggcta cgatagtaat ccttcgtcgg acactcgctg aaaacaacca catccatccg
     6661 gcgccgaaaa tgaagaaagt ttataaatcc tctggaaaca tgctctgtgc tatggtagta
     6721 gactatacaa ccttcaaaga ttataaagag cagccattta aatggaaatt ctgggcgcat
     6781 gtcattagaa aaaaaacaag ggctatggat catattctcg aacttggatg tacgcacggt
     6841 tacatttttt catatcttaa agaatacaaa aataaatcag gggtagatat ttctcatgct
     6901 gcgattgaac acgcgaaaaa aattaacccg ctggcaaatt tttctgtaat ggatgcagag
     6961 aaacttgcat tcgaggacga agcattccag cttgttcttt gcatcgatat gatagagcat
     7021 gtaaaaaatc ctgaagcatg tattcaagaa gcttatcgca ttctcaaaaa aggcggatat
     7081 gttatcatca caacgccaaa cccagaatca tacagcagaa agaaaaaagg actgaaatgg
     7141 tttgccttcc aagatcccac acatatctcg atctatgaaa taaagaaatg gactgagctt
     7201 ttagaaaaaa ataattttgt gatagaaaat gcaacaacaa tcgatctctt cgatatgccc
     7261 tattttagca aatggtttca ggggataaac tggtttctgt acacgatccg ccatccattt
     7321 attccaaggt acggcgacaa cagcgtcttt attgcacgaa agcgttagat atatgaaaca
     7381 aacgcatcac tttttggacc aaatgaaacc atgtgaattg gaaggtccgt tgtggcctcg
     7441 atagctttta agtatatttt cagatttgaa tccttgatcc catcaatgcc gtcagcaaac
     7501 tgtcgtctat attcttcttc cgtaaaatca ggccatcctt gaaacgtttc atagagcgga
     7561 acacaaaggt tataatcaac aggcaaaaca ccattaccca aaaacttaga gaaaggagtt
     7621 ttatagtcgt acgcaagttt gatggtgtcc atgccgccga gaatatcaat ctttgtaact
     7681 gcaagaccag taatgccaga ggcacggttt gcaacacgaa ccatatgtgc atcaaaccat
     7741 cctacgcgcc gcggtcttcc tgtcgtcgtc ccgaactctt ttcctttttc acgcaagaaa
     7801 tcctcggcgt ctccaataag ctcagtaaga aatggaccat tgccaaccct gctcacataa
     7861 gcctttgcta caccatgcac aggaccaaga tactctgacc tcggaccgat gccaagacca
     7921 acccagatac caggtgcatt tgtttctgac gaagttccac gaggataata cgcattgttc
     7981 acatcaagca tttctccttg tgcacattca ccaataattc cttttccttc tcgtagaagt
     8041 ccttcaattt tcagtgcaac gtcagaaacg atttgttcat aatatggcaa aaatctatct
     8101 ttggaagttt ctaacatttg acgataggat ttttgtaagg ttcttcgtgt aaaccagtta
     8161 aacaagccag gtgcacgcct ttccaaataa tgttcttgga cttgttctac tcgcttagga
     8221 tcttcaaaaa gatcaacaac acgaacgccc cagcgctcat gctttgctcc gtacacaggc
     8281 ccaacacctc ttcttgtgga accagcagaa aaatttcctt gcgcactatc attcaaccca
     8341 tcaagttctt tatgccacgg taagataaca tgcgcacaag gatctaggac aatatcagga
     8401 gaaagaccac gtagtttaag tttttgaatt tcatcaacaa gaacatcaag gtcaacagca
     8461 catcctctgc cgatataccc tctttttcca gcaatcacag aagaaggaac aagatgcagt
     8521 ttgtatggct ccgcatcagc aggaagttct tcaggatgaa ttgtatgccc tgcgttattg
     8581 gcaccttgcg cacgtgcacc agcaacaata tgctcatcaa gagaaagacg atgggtgatt
     8641 gccccttttc cttcatcccc aaactgggta cccactacaa cagttaacat tcttcacctt
     8701 cttttttttg taaaaaagat ttatatttct tatttaccat aatcttcctg tacttctgga
     8761 acaacatcat cttctttcaa cgcttgttca acttcatctg gaagctcaac agttttctct
     8821 tcgctctctc cagtatcaga agaatttccc ttggtatttc taaagacaag ggcaacaaca
     8881 acagcaagga ttagcacacc aataagtgca agtagaacat ttcggtaact aaaagtatca
     8941 tctaattttc cagcagcagg aacatcacca gtaacctctt gatccgtttt ttgtgtcaag
     9001 tcttggagaa caaggtgcac ttgcccatct tcagcaatcc catacagtgc aatcccaagg
     9061 tcatccgttc catctttgtc aagatctatt ttattgatgg tatcaaagcc aacaagaccc
     9121 ggccatagtt ctgtattatt tccaataaat gcccctatat ccaatttcac ggacgctttt
     9181 ccaacgtctt caataattat catatgctcg ccaccaagaa tactaaaacg cacttcatca
     9241 tgttcataga gtaaaatagc ttgcgtagga atttctgaaa agtcagtatc ataactattt
     9301 cctgcaagag cactaggaat aagtagcaag aaaatgagga agataggaat agttatttgc
     9361 atagcttcta ggaaaacaat ccccccattt ataaacttta tgagaaaaaa aaacaattgt
     9421 tcaattactt atattcttcg gaaataccaa tatgtgccaa gtcctagact aagcacaaga
     9481 actgcaacaa caacccacac tcgcagagat aacccttttt cttcccctga aatctctctc
     9541 catgtgccta ctttagcaaa gctcacatca gcaacaccgg cagtgattcc atttacagta
     9601 atcaaaaggt cgctaaagcc atcctgatca agatcaactt ctttgccttc tccaacaagg
     9661 accgtaactt cctgtgcatc gctctgaaca aggaaaataa catacccttg ttcttcgttt
     9721 acgtcggtta cttcaatcgt atggtttgca acctgctttg tagcatcaac aaattcaaat
     9781 gtgtataatt taccaacaga tacatcaatg tagcttacgg atccctctgt ttcccacgta
     9841 tcaacatttg caatgggcac agcaacttct ttagcttgtt cttcaggaac tacttcttca
     9901 ggagtcactt cccctccact tccaccactg ccagaggagc caccagctgc accgccacta
     9961 tcagcagatc cttcaccaga tccagcaaca gcaaaggtct tagtacttga agtactcttt
    10021 ccagcgtaat ctgttgcagt acaacgcacg gaatgcgttc cagattctat agtcgcgtac
    10081 ttgtaggcgc tctgtgcctg agagctaaga acagtatagc ttgactgcgt cggcctttta
    10141 agttccaaac tcataactgg acttccatca agattatctg ttgcagtaca aacaagagta
    10201 actatgtctc ccaaaagagc atcagttggc gttgtggtat gcgtaataac aggaaccgtc
    10261 ctatcaatgt taataatcct gttaccactt ctattaatat tattgaacaa gtctgtcgta
    10321 gttacgttaa gagtatagtt cccatcagct aaaaggctaa agttcatata ctgcgaactc
    10381 aagttgccgc tttctctcgg accggcagca aatgttgtct tattgaatcc aggagtagta
    10441 tttcctgagg caatagccga cccattttgg atataaattg tcacgtttgc aatgttccat
    10501 tcataaacac tgacattaac aacaatatta tcccttgtgg taagattgct attgttcgtc
    10561 tcggtatctg aaagatacgc tagtaatggt cgagagttat ctatgacaat cgtaaagttt
    10621 gccccagaca tgttactcgt gaaactctca cctgcattag caatagaggc attaaagtac
    10681 caagtatggt tcccatcagg aagactcttg ttagaaacaa tgctaaaagt attactaacc
    10741 ccgctagtat tagtgtcgtt tacagcaact gcagtcccta aataaagaat agaaccgtta
    10801 acattagaat tattgctggc tcgagatcca ttatctccac ctagttgcat aagcaattga
    10861 accaaaacag aactgccgtt tgtagtgtta atacgccctg taaagttagc agtaaaatta
    10921 ctagtagaac tattgataat aaaattgaga agaccagcac taccatttgt agcatatgtt
    10981 gcgtttactg gactaatatg gttaacaagg tgcgccggat ttacagcaag aacatacccg
    11041 ccataaagac ctatgactaa caaaagacta ataatcagaa acttaaaaac acgattcacc
    11101 tttcttcaca cctcattgaa aaatagaaga acattttgcc ttatatactt tttgttaagc
    11161 caaaaaaaat agattataaa aaaaataaaa aatttatttc cttcgcattg accagtacac
    11221 cacaagtgca acgaccacaa gtgcaaggat tacccagagc catgtgtaag acactgctgc
    11281 ttgtgcaggc acctctttcc atgtccccgc ttttgcaaag ctcacatcag caacaccatc
    11341 gctgatgcca ttaagcgtaa tgaggagatc actcacataa tcgccgttaa ggtcaacttc
    11401 tttgctttcg ccgactgcga cctgcacttc ttgtgcatcg ctctggacga taaagacagc
    11461 aagaccatcc gcttcattga gctctttaac ttcaatgcta tgcgccgcca cttccccaga
    11521 agcatcaaca
//
LOCUS       DATDZU010000062         2850 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2374497, whole genome shotgun sequence.
ACCESSION   DATDZU010000062 DATDZU010000000
VERSION     DATDZU010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2374497"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VJJ79_02115"
     CDS             <1..396
                     /locus_tag="VJJ79_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22544.1"
                     /translation="VEKIIKERYKPSAIAHSLKKETLDFMMNVKKFPQDLRTFLHILK
                     TGTKVKVELEHGELADLTKEIDRSSHHLTLGLIISGALVSTGLLILANLGPNMFGIPV
                     LAWIGVALTILLIGMLTVSIFIEKKGGVL"
     gene            396..692
                     /locus_tag="VJJ79_02120"
     CDS             396..692
                     /locus_tag="VJJ79_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22545.1"
                     /translation="MKQKLRDLGYAGLGLGETVREKVQSLVKKGKKSGKKLPRRGDLE
                     EKVRSGVAFAGKEALIISKKSLEMLERELKKLEREAHKARIPKAAKKARKKKKR"
     gene            783..1151
                     /locus_tag="VJJ79_02125"
     CDS             783..1151
                     /locus_tag="VJJ79_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018202479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HLC22546.1"
                     /translation="MTMDEKILVEKAYEAVEVAKTSGKLRKGSNEATKALEKGIAKLV
                     VAAKDTNPPEIIMHLEPLCKEKHVPYVLVPSKTELGTAAGLPISCSAVVIVQEGEAKK
                     LIQDIADASGKEDGSTKKAK"
     gene            1126..1425
                     /locus_tag="VJJ79_02130"
     CDS             1126..1425
                     /locus_tag="VJJ79_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010978233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S28e"
                     /protein_id="HLC22547.1"
                     /translation="MAVPKKQSNPEEKKDVNKVEKKEQRPSSLFSYAVPARVEEIIGR
                     TGTRGEVIQVRCKILDGRDVNKILTRNVKGPIRLKDILMLRETEIEARKLTKGKK"
     gene            1426..1614
                     /locus_tag="VJJ79_02135"
     CDS             1426..1614
                     /locus_tag="VJJ79_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007044372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24e"
                     /protein_id="HLC22548.1"
                     /translation="MAPCTFCGREIIPGTGTLYVYKTGKVAKFCALKCQKHALKLNRK
                     PQDMKWTLTAANIKKKKK"
     gene            1611..2102
                     /gene="ndk"
                     /locus_tag="VJJ79_02140"
     CDS             1611..2102
                     /gene="ndk"
                     /locus_tag="VJJ79_02140"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011772410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HLC22549.1"
                     /translation="MIERTFVMIKPDGVKRALVGEVISRFEKAGLKLVAMKMLWVDEK
                     FAKEHYTEDITIRRGERVRRDLVTFVTEGPVVAMVWEGISAIAVVRKLVGTTEPKAAM
                     PGTIRGDYAHVSFSYADKKQIAVKNIIHASGDITDAEREIKLWFREHDLHTYLNVHDA
                     HVY"
     gene            complement(2099..2494)
                     /locus_tag="VJJ79_02145"
     CDS             complement(2099..2494)
                     /locus_tag="VJJ79_02145"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLC22550.1"
                     /translation="MITRFQKITLVKLRSPQKNVNQEIQWLSESLGLFSERDKDKSCF
                     RLFLEIIKTRKPVSSDELASRVNVSRATVIHHLNKLIATGLVDMQDNKYVLRGKNLES
                     TLKQVKTDMLAAYEEMEEIARKIDQTLGL"
     gene            complement(2539..>2850)
                     /locus_tag="VJJ79_02150"
     CDS             complement(2539..>2850)
                     /locus_tag="VJJ79_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22551.1"
                     /translation="NGFIHSSPKAVIYAMKHTLAPVRDVKVKKLCQVIHEKRKTFPFS
                     ERYVVEHLGYSKVDFFNLKRSGNMISYQLLVERPGSKIAQFEDVIYIDKDDVIITTKQ
                     K"
BASE COUNT          897 a          547 c          666 g          740 t
ORIGIN      
        1 gttgaaaaaa tcatcaagga aaggtacaag ccgtccgcca tcgctcattc tctcaagaaa
       61 gaaacgctgg actttatgat gaatgtcaaa aagtttccgc aagatttaag aactttcttg
      121 cacatattaa aaacaggaac aaaggttaag gttgagcttg agcatggaga acttgccgat
      181 ctaactaaag agatcgaccg ttcgagccat catctcacgc tgggcttgat aatttccggt
      241 gcgctggtga gcacagggtt gcttatcctt gctaaccttg gaccaaatat gtttggcatc
      301 ccggtgctag catggattgg tgttgcattg actatactct tgataggcat gcttactgta
      361 tcaatattca tagaaaaaaa aggaggtgtt ttatagtgaa acaaaaatta cgtgaccttg
      421 gttatgctgg tctaggactt ggagaaacgg tgagagaaaa agtacagtcc ctcgtgaaaa
      481 aaggaaagaa aagtggcaag aaacttccgc gcagaggaga tcttgaagaa aaggtaagaa
      541 gtggtgttgc ctttgcaggg aaagaagcac tcatcatttc taagaaaagc ctagagatgc
      601 tggaacgcga gctgaaaaaa ttggagcgag aagcgcacaa agcacggata ccaaaagccg
      661 ctaaaaaagc gcgaaagaaa aagaagcggt aacttttttt ctcctttctt ttgtggaata
      721 gcaaggctta taaatggata ctttttccta taatatgaga ccgatgattc gataggaggt
      781 taatgaccat ggatgaaaaa attctcgtag aaaaggcata tgaagccgtt gaggttgcga
      841 agacctctgg taagttgaga aaaggttcca acgaagccac aaaagcgctt gaaaaaggta
      901 ttgcaaagct tgtggttgct gcaaaggata ctaatcctcc agaaattatt atgcaccttg
      961 agccgctctg caaagaaaaa catgttcctt acgttcttgt tccgagcaag actgagcttg
     1021 ggacggcagc tggacttccg atatcctgca gcgctgttgt tatcgtgcag gaaggcgagg
     1081 caaaaaaact gatccaggac attgcagacg catcaggtaa agaagatggc agtaccaaaa
     1141 aagcaaagta atccggaaga gaagaaagac gtgaataagg tagaaaagaa agagcaaaga
     1201 ccttcctctc tgtttagtta tgctgtccct gcgcgcgtcg aagaaataat tggacgcact
     1261 ggcacgcgag gcgaagttat ccaagtacgc tgcaagattc ttgatggacg ggacgttaac
     1321 aaaatcctta cgcgaaacgt caaaggtccg atacgattga aagatattct catgcttaga
     1381 gagacagaaa tcgaagcacg aaagctcacc aaggggaaaa aataaatggc accttgtaca
     1441 ttttgtggac gagaaattat ccctggaacc ggaacactgt atgtctataa aactggaaaa
     1501 gttgcaaaat tctgtgcttt aaaatgtcag aaacatgcgc tgaagctcaa tagaaaaccg
     1561 caagacatga agtggacgct gactgcggct aatataaaga aaaagaaaaa atgattgagc
     1621 gtacatttgt aatgattaag ccagacggcg ttaaacgggc gcttgttggg gaggttattt
     1681 ctcggtttga aaaagcaggt ttaaaactcg ttgccatgaa aatgctttgg gtcgatgaaa
     1741 agtttgcaaa ggaacattac accgaagata ttactatcag gagaggcgag cgggttcgac
     1801 gggaccttgt tacctttgtg actgaaggac cagtggtggc catggtgtgg gaagggatca
     1861 gtgccattgc cgtcgtacga aaacttgttg gaacgacgga accaaaagca gcaatgccgg
     1921 gaacgatccg cggcgattac gcgcacgttt ctttctccta tgccgataaa aaacaaatcg
     1981 ctgtaaaaaa tattatccat gcatccggcg atatcaccga tgcagagcga gaaataaagt
     2041 tatggttcag ggaacatgat cttcatacgt acttgaacgt gcacgatgcg catgtctatt
     2101 agagacctaa cgtctggtca atctttcgcg caatttcttc catctcttca tacgcagcaa
     2161 gcatgtccgt ttttacttgt ttgagagtgg attccagatt tttcccgcgg agcacgtact
     2221 tgttgtcctg catatcgaca agacctgttg caatcagctt gttcaaatga tgaatcactg
     2281 ttgccctgct gacattgact ctggaggcaa gttcatcaga tgatactggt tttcttgttt
     2341 tgatgatttc gagaaacaga cgaaagcagg atttatcctt gtctctctct gaaaataaac
     2401 ctaatgattc ggaaagccac tggatctcct ggttgacatt tttctgcgga gatcgtaact
     2461 ttaccaatgt aattttctgg aaacgtgtaa tcatgtgtta agaaaagaaa aagtctgttt
     2521 ataaatgttg ttgcttggtt acttttgctt tgttgtaata ataacgtcgt ccttgtcaat
     2581 gtaaattacg tcctcaaact gggcaatctt tgaccctgga cgttctacta ataattgata
     2641 actaatcatg tttccagacc gtttcaaatt aaagaaatct acctttgaat accccaaatg
     2701 ttccacgacg taccgttcac tgaaaggaaa cgttttacgt ttctcgtgaa tcacctggca
     2761 caatttcttt actttgacat cacgcactgg agcaagcgta tgtttcatag cataaatgac
     2821 tgccttgggc gatgaatgaa taaacccgtt
//
LOCUS       DATDZU010000063         2532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1939978, whole genome shotgun sequence.
ACCESSION   DATDZU010000063 DATDZU010000000
VERSION     DATDZU010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939978"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..333)
                     /locus_tag="VJJ79_02155"
     CDS             complement(13..333)
                     /locus_tag="VJJ79_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012819635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor"
                     /protein_id="HLC22552.1"
                     /translation="MSEICSRCGLPKELCVCETIAKEDQKIEIRLVKRRFGKLSTIIS
                     GIDDKTINIKELGKKLKTKLACGGTVKDNHIELQGNHLEKAKEFMIEEGFSPRSITFK
                     DETR"
     gene            complement(326..550)
                     /gene="rpmC"
                     /locus_tag="VJJ79_02160"
     CDS             complement(326..550)
                     /gene="rpmC"
                     /locus_tag="VJJ79_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007044064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HLC22553.1"
                     /translation="MKSKTSELRGMSTQLLEEKLSELKKNLMKINAQIATGTIPENPG
                     NVRNIKKTVARILMIITEKKKEVPNKKANE"
     gene            complement(534..1313)
                     /locus_tag="VJJ79_02165"
     CDS             complement(534..1313)
                     /locus_tag="VJJ79_02165"
                     /inference="COORDINATES: protein motif:HMM:NF003219.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HLC22554.1"
                     /translation="MIERKFVAEKMREFLVNDYLSKKLGAGKYSSFEIKRTPLGERIV
                     IYTSRPGVIVGKGGENIKELTKVLKTRFNMENPQIEVAEITNPDLDAQTMAEIVVTTL
                     ERFGPKRFKSVGYKVLQRIIDAGAMGAEINIGGRGLPGARAKNWRFYAGYLKKSGDVA
                     VSGVKYAHCVANLKSGTIGIKVRILPPETILPDKITFIVAPKIFVEEIKEIPQEKSEE
                     KEEPKKKKTATKRTASKKKKKEESVEENKDGLVEENNEKQN"
     gene            complement(1310..1759)
                     /gene="rplV"
                     /locus_tag="VJJ79_02170"
     CDS             complement(1310..1759)
                     /gene="rplV"
                     /locus_tag="VJJ79_02170"
                     /inference="COORDINATES: protein motif:HMM:TIGR01038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HLC22555.1"
                     /translation="MEQQHTAMARGTNVSISRKFSVEIAHFIRGKDLATAKKLMHGVI
                     AMKVAVPFRRYDWDLAHKPGGVGPGRYPVKAVKVILGLLESAEMNAVNKGLDQEKLYI
                     HSVMANKGTTVAHGGRHGGRHAKRTHINIVLAERELKKETKKGKGKK"
     gene            complement(1761..2159)
                     /locus_tag="VJJ79_02175"
     CDS             complement(1761..2159)
                     /locus_tag="VJJ79_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013904908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HLC22556.1"
                     /translation="MAKKQFTYRGKTIEELMAMNLKDFAQLTPARQRRSLEHGLSDQQ
                     KKLLLKIKKTKEGKWKKPIKTHCRSMIVLPEMVDMTIHVYAGKAFILIKIQQEMIGHY
                     LGEFTLTRNRVQHSAPGIGATKSSSAASVK"
     gene            complement(2159..>2532)
                     /gene="rpl2p"
                     /locus_tag="VJJ79_02180"
     CDS             complement(2159..>2532)
                     /gene="rpl2p"
                     /locus_tag="VJJ79_02180"
                     /inference="COORDINATES: protein motif:HMM:NF015880.4"
                     /note="one of the primary rRNA-binding proteins; required
                     for association of the 30S and 50S subunits to form the
                     70S ribosome, for tRNA binding and peptide bond formation;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HLC22557.1"
                     /translation="GGKLVRTAGSFAQVVGKVDDRVIVILPSKKQKTLSDKCRATVGV
                     IAGDGAQEKPFMKAGNRMHKMQATNRLYPRTSGVAMNAVDHPFGSGRGRHPGKPKTPP
                     RWAPAGRNVGLIHARRTGRRR"
BASE COUNT          533 a          597 c          494 g          908 t
ORIGIN      
        1 tctttgccga tctcaccttg tttcgtcctt gaatgttata gagcgcgggg aaaatccttc
       61 ctcaatcatg aattcttttg ctttttcaag gtgatttccc tggagctcaa tatgattatc
      121 cttgactgtc ccgccacatg caagctttgt tttaagcttt ttgcctagtt cctttatatt
      181 gatggttttg tcatcaatac cggaaatgat cgtggagagt tttccgaacc tgcgcttgac
      241 caaacggatc tctatttttt gatcctcttt tgcgattgtt tcacagacgc aaagttcttt
      301 tggtagaccg cacctggagc atatttcact cattggcttt tttatttgga acctccttct
      361 tcttttctgt tataatcatg agtattcgtg ctactgtctt ttttatattc ctgacgtttc
      421 ctggattttc tgggattgtt cctgttgcaa tctgcgcatt aattttcatg aggttcttct
      481 tcaactcgga aagcttttct tctaagagtt gcgtgctcat tccgcgaagt tcactagttt
      541 tgcttttcat tgttttcctc aactaatcca tctttattct cttcgacgga ttcttctttc
      601 tttttctttt tgcttgctgt tcttttagtc gcagtttttt tcttttttgg ttcttctttt
      661 tcttcgctct tttcttgtgg aatttctttt atttcttcca caaaaatctt tggcgcaacg
      721 ataaaggtaa tcttatcggg aaggatagtt tcaggcggca agatgcgcac ctttattcca
      781 atagttcctg atttaaggtt tgcaacgcaa tgtgcatatt tcacgccaga gacagcaaca
      841 tctccagatt ttttgagata tcctgcataa aatcgccagt tctttgctcg tgcaccggga
      901 agtcctcgtc cgcctatgtt aatttctgca cccattgcac cagcatcaat aatccgttgt
      961 agtactttat agccgacaga cttgaaacgc tttggtccga atcgttcaag tgttgtgaca
     1021 actatctctg ccattgtctg tgcatctaag tctgggttag tgatttccgc aacttcaatc
     1081 tgcgggtttt ccatgttgaa ccgcgtcttc aagactttag ttagctcttt aatattttcg
     1141 ccacctttcc caacgataac gccgggtcgt gacgtgtaaa taacaatgcg ttccccaaga
     1201 ggtgtccgtt taatttcgaa tgagctgtac tttcccgccc ctagcttttt tgagagataa
     1261 tcatttacca aaaattctcg cattttctcg gcgacaaatt tcctttcaat cattttttac
     1321 ctttcccctt cttagtttct ttttttagtt ctcgttctgc aaggacaatg ttgatatggg
     1381 ttcgttttgc atgccgaccc ccatgtcgtc cgccgtgcgc aacagttgtt cccttgtttg
     1441 ccatcacgga atgaatatat aacttttctt ggtcaagtcc tttgttgaca gcgttcatct
     1501 cagcagattc cagcaaacct aggataactt ttactgcctt aactggatac cgtccaggac
     1561 caacgcctcc cggtttatgc gcaaggtccc aatcatatcg ccggaacggg acagcaactt
     1621 tcatagcaat gacgccatgc ataagcttct tagcagtagc aagatctttt ccacggataa
     1681 aatgtgcaat ctcgactgaa aattttcgcg agatggaaac atttgttccg cgtgccattg
     1741 ctgtgtgttg ttgttccatt ttatttcacg gatgcagcag agctagactt cgttgcacca
     1801 atacctggag ctgagtgctg tactctgttt cgtgttaagg taaattctcc aaggtaatgc
     1861 cctatcatct cttgttgaat cttgatgagg atgaacgctt tccctgcata tacatggata
     1921 gtcatgtcta ccatttcagg cagaacaatc atgctacggc agtgtgtttt gataggtttt
     1981 ttccattttc cttcctttgt ctttttgatt ttgaggagga gttttttttg ttgatcacta
     2041 agcccatgct ccaaacttcg tcgttgtctg gctggcgtaa gctgtgcaaa gtctttcaaa
     2101 ttcattgcca ttaattcttc gatggttttt ccgcgatagg taaattgttt ctttgccatt
     2161 atctcctcct accagttctg cgagcgtgaa taagtccaac attccgtccg gcaggtgccc
     2221 agcgtggggg cgtcttcggt tttccagggt gtcttccccg tccggatccg aatgggtgat
     2281 cgactgcgtt cattgcaaca cctgaagtgc gaggatacaa tctgttagtt gcctgcatct
     2341 tgtgcattct gtttccagct ttcataaatg gcttttcctg tgcgccatcg ccagcgataa
     2401 caccgacagt tgcacggcat ttatcggaca acgttttttg tttttttgaa ggcaggataa
     2461 caatgaccct atcatcaact tttcctacaa cttgcgcaaa gctccctgcg gtgcgcacaa
     2521 gtttcccgcc at
//
LOCUS       DATDZU010000064         7156 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2183884, whole genome shotgun sequence.
ACCESSION   DATDZU010000064 DATDZU010000000
VERSION     DATDZU010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7156
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2183884"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VJJ79_02185"
     CDS             complement(<1..901)
                     /locus_tag="VJJ79_02185"
                     /inference="COORDINATES: protein motif:HMM:NF017039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HLC22558.1"
                     /translation="MDFETLTPAMRQYAELKKIYKDCIIMFRMGDFYEMFYEDAEVAA
                     KELEITLTSRGKGEKRAPLAGVPYHALDSYLTKLVKKGYKVAICEQLEDPKKAKGLVK
                     RGVVRVVTPGTLLEHTQANTFIASLFVYGEKEAVAVCDLSTGEFFVTDGLEHITFDEC
                     VIPSSLFVNAAFVQQVKRHGVFISDFDDRYFSMDNAYRALLDHFRVLSLEGFGLRKDD
                     ARVRAAGALLSYLRETQMQTLSHIKKISVKEVREHMVMDHVAVRNLELFHNIRDGTSR
                     GSLLRVLDKTQTAMGGRLLRRWML"
     gene            complement(949..2220)
                     /gene="serS"
                     /locus_tag="VJJ79_02190"
     CDS             complement(949..2220)
                     /gene="serS"
                     /locus_tag="VJJ79_02190"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HLC22559.1"
                     /translation="MIDIKVVRENPGLFEKSYTRMKRPEVLEKFQDLLKKDAQLRSIK
                     KELDDLRASRNILSQKINQLKKEGKSADAILKQVRELPEKIKEKEGEYACLEVGVKDL
                     LNMLPNLLHEAVPYGKSAEDNVEIRKSGRKPKFDFPIKNHVELLEALGAVDFDASARS
                     TGNGFYYLKGDFALLNHALIAFALDHMRKKGYMYIEPPLMLRSGILFAAIDKEAFEQS
                     IYRVEGEDTCLIGTSEFSLLGMHADEIVTHLPKKYFSYTMCFRKEIGSHGINEKGLWR
                     THQFNKVEQFVFCRKEDSWKYYEEMLRNTEEIFKALELPYRVIEICTGDLARWKARSA
                     DVEVWRPTTNSYGEVASLSNCTDYQARNLNIRYEENGEKHIVHTLNNTVIATSRALVA
                     IVEHYQQKDGSIRVPKVLSKYMGGKKVIRKQ"
     gene            2378..2653
                     /locus_tag="VJJ79_02195"
     CDS             2378..2653
                     /locus_tag="VJJ79_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HLC22560.1"
                     /translation="MPKIGKEIFEVFFRKKPAMILVALRQSSRNKYGSILAKEVDCTY
                     SHAVKILQEMEKSNLVSFHKNGRIKTIELTDAGNKVAEHIEKIRTLL"
     gene            complement(2650..6687)
                     /gene="polC"
                     /locus_tag="VJJ79_02200"
     CDS             complement(2650..6687)
                     /gene="polC"
                     /locus_tag="VJJ79_02200"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HLC22561.1"
                     /translation="MAPYSSRVANIFEQFNTEIQQCYGIAQQAKNVGVDPDSEVKIPL
                     AKNMAERVEGLISTVAPEILGKGVPERIQELEKQYGSQDWRVALVISHEVALEKFCTF
                     SDKNKAIETGIRVGFAYATVGVVSSPLEGFIGLQFRKRIDTGKEYFVLVYGGPIRSAG
                     GTGASVSVLIADYLRKKFGYATYDPTEQEVKRAYVELCDYHERVTNLQYFPSEEETTF
                     LLQHLPMQIDGDPSEKFDVSNYKYLPRRISNQISNGFCLVVAECLALKAPKLWKQLSK
                     WGKEMDLEQWNFIGDFVALQKEIKSRGAKVDVAVKKEMISPDTTFIKDIVAGRPVFTY
                     PLRNGGFRLRYGRGRVSGFSADSIHPATMVIVNKFLAVGTQLKTERPGKSTTLNVCDA
                     LEGPIIRLKNGTVVQVRTMGEAEGVLKDVDEILYLGDILINWGDFQNRAHKLIPCGFV
                     EEWWIYFAEKVFDTVLLSKEYLQQLYERPIQTFVSFDDALKFSQLGVPLHPRYIFYWN
                     ALSSDDFFNLYNVLKCSVVQEGKILVADFSVKRNLELIGCEHAVVSNEYIIIAGDTAR
                     ALLINLGNFQKEPAGETTLVLVNSVSSFEIKDKCGTFIGARMGRPEKAKMRKMTGSPH
                     VLFPVGQEGGRLRCFQSALDVGKVFSQFSVYFCESCQRETIYGACELCWSKTKRRWYC
                     LSCRAFMLEDKCALHGKVKPSVPKSLDIKHYFYKALERIGTRQYPDLVKGIRGLSSAE
                     QIPEHLVKGILRAKHQLHVNKDGTIRYDMTELPCTHFKSKEVGTSVEKLKELGYIHDV
                     YGKELVDENQVLELFAQDVILPACPQSPDEGADDVLFRVANFIDEMLETLYKLPRYYN
                     LKTKKDTVGHLIVAMSPHTSAGIICRIIGFSKVQGLYAHPLLHSIMRRDCVYPSTELI
                     IKDKTGVKKVSIGSYVEDLISRGAQTKKMDMVGTLSVENIDGVIVFGVDSKNFLLQEK
                     KVKYFIKGPLEKEWIKVQSKNGREFTMTKNHDYLSFFEGKFSTKKAQDITYKDTFISL
                     SSQKNPYFEKKLFSENYLVSKGDIHIESLQKVFSLSSEAHSYCLDVEAESLIDKNVLW
                     GDSIINLRCDGDEAGCMLLLDTLLNFSRKFLPNTRGITQDAPLVLTGQLVPSEVDDMV
                     FDMDIVSRYPLEFYEAAALYKNPWDVKIKKLGDCLGTEAQYEGMMFTHDTDDFNHGIL
                     CSAYKIIPTMREKVIAQMDVAKKIRSVDEDDVARLVLERHFLRDIKGNLRKFSQQSFR
                     CVGCNEIYRRPPLSGSCHCGKKLVFTIAEGSVKKYVGPAQDLARNYELPAYLQQSILL
                     LCDRIESFFGKEKEKQEGLKKWFGA"
     gene            complement(6745..7014)
                     /locus_tag="VJJ79_02205"
     CDS             complement(6745..7014)
                     /locus_tag="VJJ79_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22562.1"
                     /translation="MFRKLIIFFAVYLTIDILLRTEKKLKLSYQYILFAWVIFAVGEI
                     AVIGEEILFWKLGHYRELFILFFILLFVTRTWFARKTIHEAAQTA"
BASE COUNT         2107 a         1658 c         1321 g         2070 t
ORIGIN      
        1 cgagcatcca tcgccgcaac agcctgccgc ccatcgccgt ctgcgtttta tcgagcacgc
       61 gcaacaacga tccgcgagac gtgccgtcac gaatattatg aaacaattcc aggttacgca
      121 cagcaacatg atccatgacc atatgctccc gtacttcttt aactgaaatt tttttaatgt
      181 gtgataatgt ttgcatttgc gtttcgcgaa ggtatgagag gagcgcgccg gcagcacgga
      241 cacgagcatc atctttccgc agcccaaatc cttcaagaga aagcacacgg aaatggtcca
      301 acaaggcacg atacgcattg tccatagaaa aatacctgtc atcaaaatcg gaaataaaaa
      361 cgccgtgccg tttcacttgt tgaacaaacg cagcgttcac aaaaagactt gatggaatca
      421 cgcactcgtc aaaagtaata tgttccagtc catccgtaac aaaaaattct ccggttgaaa
      481 ggtcgcacac cgcaactgct tctttttctc catagacaaa caagcttgcg ataaacgtat
      541 ttgcctgggt atgctcaagc aacgtcccgg gcgtcaccac gcgcaccaca ccgcgcttca
      601 cgagcccctt cgctttcttc ggatcctcaa gttgttcaca gatcgcaact ttgtaccctt
      661 tcttcaccaa ctttgtaagg tacgaatcta aggcgtgata cggaacaccg gcaagcggag
      721 ctcttttttc tcctttcccc cgggatgtca gcgtaatttc taattccttc gcggcaactt
      781 ccgcatcttc gtaaaacatt tcgtagaagt cccccatgcg aaacatgata atgcagtctt
      841 tgtatatttt cttcagttct gcatattgcc tcattgcggg cgttaaagtc tcaaaatcca
      901 taaaagaaag aaacagatat tgactttaaa agaattattc tgctcgactt actgcttgcg
      961 gattactttt tttccgccca tgtacttcga gaggactttc gggacgcgga tggaaccgtc
     1021 tttttgctgg taatgctcaa cgatggcaac aagcgcccgt gacgtggcga tgacagtatt
     1081 gttcagtgta tgcacgatat gcttttctcc attttcctca taccgaatat tcaagtttcg
     1141 tgcctggtaa tccgtgcaat tggaaaggga cgcaacttcg ccgtaggaat ttgtcgtcgg
     1201 ccgccatact tcaacgtccg cgctccgtgc tttccaccgc gcaaggtcgc cagtacagat
     1261 ctcgataacc cgatagggaa gttccagcgc tttaaaaatt tcttctgtat tacggagcat
     1321 ttcctcgtag tacttccatg aatcttcttt cctgcaaaaa acaaactgct cgactttgtt
     1381 aaattgatgt gttctccaca gccctttctc gttaattcca tgagagccaa tttcttttct
     1441 aaaacacata gtgtaggaaa aatatttttt gggtaaatgc gtgacaattt catccgcatg
     1501 cattcccaga agagaaaatt cactcgtgcc gataagacag gtatcttctc cttcgactct
     1561 gtaaatgctc tgctcaaacg cttctttgtc gatggcagca aaaaggatcc cagaacgcaa
     1621 catcaatggc ggttcaatgt acatgtaccc tttcttgcgc atatggtcga gagcaaatgc
     1681 aatcagtgca tgattcaaaa gggcaaagtc tcccttcaaa taataaaaac cgttcccagt
     1741 gcttcgcgct gacgcgtcaa agtctaccgc gcccagcgct tctaatagtt ctacatgatt
     1801 ttttattgga aaatcaaact tgggctttct gcctgacttc cgtatctcga cattatcctc
     1861 tgccgacttt ccgtagggca ctgcttcatg aagaagattg ggcagcatat taagaagatc
     1921 tttcacgcca acttcaagac aggcgtattc cccttccttt tctttaattt tctctggaag
     1981 ctctcgcact tgtttcaaga tagcgtcggc gctctttcct tctttcttca actgattaat
     2041 tttttgtgaa agaatattgc gggatgcgcg caagtcatcc agctctttct tgatagaacg
     2101 caactgcgca tctttcttca gaagatcctg gaacttttca agcacctcgg gcctcttcat
     2161 gcgagtatag ctcttttcaa acaagcccgg attctcacgc actactttaa tatctatcat
     2221 aacgccccaa agaagcataa tagatttaaa agagttgcgt agaaactact ttgcaatgat
     2281 tacaacataa gccttatata aaagatatca atattattat atatacataa aaaagagtgg
     2341 taacaaaaag caggtgatga caatgggagg agaaaaaatg ccaaaaatag gaaaagaaat
     2401 ttttgaagtt ttctttagga agaaacctgc aatgatatta gtcgcactac gacaaagttc
     2461 gagaaacaaa tacggtagca ttcttgcaaa agaagtggac tgtacatatt ctcatgcggt
     2521 gaaaattctg caagagatgg aaaaatcaaa cctggtaagt ttccataaaa atgggcgaat
     2581 taaaactatc gagttgacag atgcgggaaa caaggttgca gagcacatcg aaaagattcg
     2641 aacgcttctc taagcgccga accatttctt taacccttct tgtttttctt tttctttgcc
     2701 aaaaaaactt tcaattctgt cacagagtaa aaggatagat tgttgcaagt atgcaggcaa
     2761 ctcataattt cttgcgagat cttgtgcagg accaacatat tttttcacag acccttctgc
     2821 gatggtaaat actagttttt tgccgcagtg acaactgcca gagagtggtg gccgtcgata
     2881 aatttcatta caaccgacac aacgaaagct ttgttgggaa aattttctta ggttcccttt
     2941 gatatcacga aggaaatgcc tctcgagaac taaacgggca acatcatctt catcgactga
     3001 gcgtattttt tttgcaacgt ccatttgtgc aattactttt tctcgcatcg tcggaataat
     3061 cttgtacgcg ctgcagagaa ttccatgatt aaaatcatca gtatcatgcg taaacatcat
     3121 gccttcgtat tgcgcttctg ttccaagaca atcaccaagt ttttttattt ttacatccca
     3181 tggattttta tacaatgctg cggcctcata gaattctaga ggatagcgcg aaacaatgtc
     3241 catgtcaaac accatatcat ccacttctga tgggacaagt tgccctgtaa gaacgagagg
     3301 agcatcttga gtaatccctc gcgtatttgg aagaaatttt cgagagaaat ttaacagagt
     3361 atctagcaaa agcatgcatc ctgcctcgtc accatcacaa cgtaaattaa taatactatc
     3421 gccccataaa acatttttat ctataagaga ctcagcttca acatccagac aataactatg
     3481 agcctcagaa gaaagagaaa aaactttttg taaagattca atatgaatat cacctttact
     3541 aactaaataa ttctcagaga agagcttctt ttcaaaatag ggattttttt gagaagaaag
     3601 agaaataaaa gtatctttat aggttatatc ctgtgctttt tttgtagaaa acttaccctc
     3661 gaaaaaagaa agataatcat ggtttttagt cattgtaaac tctcttccat ttttagactg
     3721 aaccttaatc cattcttttt caagaggccc tttaataaaa tattttactt ttttttcttg
     3781 taataaaaag ttttttgaat ctactccaaa aacaataacc ccatcaatat tttcaacaga
     3841 taatgttcca accatatcca tttttttagt ttgggcacca cgcgaaatca aatcctcgac
     3901 ataagagcct atagaaactt tcttcacgcc tgttttatct ttaataatca actcggtact
     3961 aggataaaca caatcccttc tcataatact atgtaaaagc ggatgcgcat acaatccttg
     4021 cactttagaa aatccaatga tgcgacaaat aattcctgca gatgtgtgcg gactcattgc
     4081 aacaataaga tgccccacag tatccttctt ggtttttaag ttatagtacc taggcagttt
     4141 gtataacgtt tctagcatct catcgataaa atttgcaacg cggaacaaga catcatctgc
     4201 tccttcatca ggactttgcg ggcacgcggg caaaataaca tcctgtgcaa agagttctag
     4261 aacttgattt tcatctacta gttctttccc atacacatca tgaatgtacc cgagctcttt
     4321 caatttttca acggatgttc ccacttcctt tgatttgaaa tgtgtgcacg gcagttctgt
     4381 catatcatag cgtatagttc cgtccttgtt cacatggagt tgatgctttg cacgaagaat
     4441 accttttacc aaatgctctg ggatttgttc tgcgctgctc aatcctctaa tgcctttgac
     4501 aagatcagga tactgccgcg ttccaattct ctcaagagcc ttgtagaaat aatgcttaat
     4561 atcaagagat tttggaacgg aaggttttac tttaccatgg agagcacatt tatcctcgag
     4621 cataaaagca cggcaactca ggcaatacca tcgtcgtttt gtttttgacc agcatagttc
     4681 gcaggcacca taaatggttt ctctttgaca ggattcacaa aaataaaccg aaaattgtga
     4741 gaaaactttt cctacgtcca aagcactttg aaaacaccgc aaccgcccgc cttcctgccc
     4801 gactggaaaa agcacatgtg ggcttcctgt catttttcgc atcttggctt tctcgggccg
     4861 tcccatccgt gcaccgataa acgttccgca cttgtcttta atctcaaaag aagaaacact
     4921 gttcacaagc acaagtgttg tttctcctgc gggttctttc tgaaagtttc cgagattgat
     4981 aagaagcgca cgtgccgtat ctccggcgat gataatatat tcattggaaa caacggcatg
     5041 ttcacagcca ataagttcta aatttcgctt gacagaaaaa tctgcgacaa gaatctttcc
     5101 ttcttggacg acagaacatt tgagaacgtt gtacaggtta aaaaaatcat cggaagaaag
     5161 cgcattccaa taaaaaatat atcgtggatg caagggaacg cctaactgcg aaaattttaa
     5221 ggcatcatca aaagaaacaa acgtttgaat ggggcgttca tacaattgct gcaaatattc
     5281 cttgctcaaa agaacagtat cgaatacttt ttccgcaaaa taaatccacc attcttcgac
     5341 gaagccgcag ggaataagtt tatgcgcacg gttttggaaa tcaccccagt tgataaggat
     5401 gtctccgagg tacaaaattt cgtcaacatc tttgagaacg ccttctgctt ctcccatcgt
     5461 gcgcacctgt acaacagtac cattctttaa ccgaataatc ggcccttcaa gcgcatcgca
     5521 cacgttcaaa gtcgtcgatt ttcccggccg ttctgtcttc agctgcgtgc cgacggcaag
     5581 aaacttgttt acaataacca ttgtcgccgg atgaatgcta tcggcagaaa atccagaaac
     5641 acgcccgcgc ccgtagcgca agcgaaaccc gccatttcta agaggatacg taaacacggg
     5701 tcgtcctgca acaatatctt tgatgaacgt cgtgtctgga ctaatcattt cttttttcac
     5761 ggcaacgtct acttttgcac cgcgcgattt aatttctttt tgtaatgcaa caaaatctcc
     5821 aataaaattc cattgttcaa gatccatttc ctttccccat ttggaaagtt gtttccagag
     5881 cttcggtgct tttagcgcaa ggcattctgc aacaacaaga cagaacccgt tgctgatttg
     5941 gttcgagatg cgtcgaggaa gatatttata gttgctgaca tcaaacttct ctgaaggatc
     6001 gccgtcgatt tgcatgggga gatgctgcag taaaaaagtg gtttcttctt ctgatgggaa
     6061 atactgcagg ttggtaacac gttcatgata gtcacagagt tcgacatagg cgcgcttgac
     6121 ttcttgttcc gtcggatcgt acgttgcgta tccaaacttt ttcctcaagt agtctgcaat
     6181 gagcacggaa actgaagcac cagtacctcc agcactccga atcggcccgc catagaccaa
     6241 aacaaaatat tccttgcctg tgtctattcg ttttcgaaac tgcaatccga taaagccttc
     6301 gagaggagaa gatacgacac caacagtagc gtatgcaaac ccgacacgaa tccctgtttc
     6361 aatcgcttta tttttatcag aaaaagtgca aaacttttct aatgcaacct catgcgaaat
     6421 aaccagtgca acgcgccagt cttggctgcc gtactgtttc tctaactctt ggatacgttc
     6481 aggaacacct tttcctaaaa tttctggtgc tactgtggaa atcaaaccct caacgcgctc
     6541 ggccatattt tttgctaacg gaatttttac ttcactatca ggatcaacac cgacattttt
     6601 tgcttgctgc gcaatgccat aacactgctg tatttcagta ttgaactgtt caaaaatatt
     6661 cgcaacacga gaactatacg gagccatacc tttctccaga gaaaacaatt aattaaggtt
     6721 tacggcaaaa aaacatctat attttcatgc tgtttgtgca gcctcatgta tggtctttct
     6781 tgcaaaccat gtcctggtca caaacaatag tataaaaaac aaaatgaaaa gctcgcggta
     6841 atgccccaat ttccaaaaga gaatctcttc accaatgaca gcgatctctc cgacggcaaa
     6901 gatgacccac gcaaaaagta tgtattggta ggaaagcttc agttttttct ctgttcgaag
     6961 aagaatatca atcgtcaggt agactgcaaa aaagattatt agtttgcgaa acaatatatt
     7021 ttttatatcc ttattcctaa aatatgtata tgaaaaaaag aagagattca ttatttggag
     7081 gagtcgtctt ctacatcatc atcggcctct tagtctctat cactttcctc tctcaaaaaa
     7141 tccctattac tcctac
//
LOCUS       DATDZU010000065         2950 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_818962, whole genome shotgun sequence.
ACCESSION   DATDZU010000065 DATDZU010000000
VERSION     DATDZU010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2950
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818962"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VJJ79_02210"
     CDS             complement(<1..515)
                     /locus_tag="VJJ79_02210"
                     /inference="COORDINATES: protein motif:HMM:NF040068.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22563.1"
                     /translation="MFSYTKALYQLNIVFPNKQYGGVYALGPLIIYNMVNQRKNWYCE
                     RVFLDAGKITAPLVGFTLQYELDVPKALAMKPKNGITFAGGPLVQMYPDILAEHFDFL
                     LLGDVEAVLDKVLDAYEEDKENFLARIRDIDGVFMTGRTKKMFPTIPIDDAPYPIVQP
                     FPHTLDDQYVFG"
     gene            complement(548..1252)
                     /locus_tag="VJJ79_02215"
     CDS             complement(548..1252)
                     /locus_tag="VJJ79_02215"
                     /inference="COORDINATES: protein motif:HMM:NF021287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HLC22564.1"
                     /translation="MEVKLSEKPKNPIILEGFPGVGLIGTITTEYLVKHLKAKPIGEI
                     FSKDLMPMIAIHEQRVVQPIEIYYVKSKNLVILHALTDIRGLEWDISDALIELYKQLK
                     AKEIISIEGIMGQSETPKAYYYTKNQSVVKKFEKSGATQLKEGVVTGVTAALLVKGRE
                     LNSTGIFVETHSNLPDSLSSAKAIEMLDAYLNLGVDYKPLEKAAAEFETKLKDYVEKM
                     RDTAKTSDKKTMEYFG"
     gene            complement(1635..2108)
                     /locus_tag="VJJ79_02220"
     CDS             complement(1635..2108)
                     /locus_tag="VJJ79_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004727917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HLC22565.1"
                     /translation="MERDAYISPCQKYRYWLYRSWDKTKKSCSFIMLNPSTADADIDD
                     PTIRRCIAYAQKFGFGSFYVINLFAYRTPYKNVLKKVEDPVGPENDACIESIAKKAEI
                     LIAAWGNDGAYMHRSRDVLAKLLKNTGKIYYLQLSKLKEPCHPLYLRKDLSLVPM"
     gene            complement(2153..2356)
                     /locus_tag="VJJ79_02225"
     CDS             complement(2153..2356)
                     /locus_tag="VJJ79_02225"
                     /inference="COORDINATES: protein motif:HMM:NF013561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HLC22566.1"
                     /translation="MKLMTFKLSESLLDALDKATEDFHFASRTEFIRAAIRDKIDHCH
                     EKRAQHGYPQSHTPEKKNMEYTG"
     gene            complement(2435..>2950)
                     /locus_tag="VJJ79_02230"
     CDS             complement(2435..>2950)
                     /locus_tag="VJJ79_02230"
                     /inference="COORDINATES: protein motif:HMM:NF019585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22567.1"
                     /translation="GIRIDKKFYTRNEAEQKFGVNIYQGGIAPGKMLRIVDIKDTDVE
                     ACGGTHLDNTAEAEKIRILSSSKIQDGIVRITFVAGNAATQEEKQEGDILGTLQKLLK
                     CERNEIPWRAEELFILWKDIVKKKRKREKVLVSHKKYAGDVLAETAKILQTQPAHIVK
                     TVQRFLDEMGM"
BASE COUNT          782 a          654 c          557 g          957 t
ORIGIN      
        1 ccaaacacgt actggtcatc gagagtatga ggaaatggtt gcacgatggg atacggtgca
       61 tcatcgatgg gaattgtggg aaacattttt ttagttcttc cagtcatgaa cacaccgtcg
      121 atatctcgga tgcgcgcaag aaaattttct ttgtcttctt cataggcatc aagaacttta
      181 tccagcactg cttccacatc accgagaagc aaaaagtcaa aatgttctgc aagaatatcc
      241 gggtacatct gcacgagtgg tcctcccgca aacgtgattc cgttttttgg cttcatcgcc
      301 agcgctttgg gaacatcaag ttcgtactgc agggtaaatc caacaagagg cgcagtaatt
      361 tttcctgcat caagaaacac gcgctcgcaa taccagttct ttcgctgatt caccatgtta
      421 taaataatca atggccccag tgcatagacg ccgccatact gtttattggg aaaaacaata
      481 ttcagctggt acagtgcttt ggtgtacgaa aacatatcgt cggagaacaa agaatacttt
      541 ataaacctta tccgaagtat tccattgtct ttttatcgct ggtttttgca gtatcacgca
      601 ttttctctac gtaatctttc agctttgttt caaactctgc tgctgctttt tctagtggtt
      661 tgtagtcgac gccaaggttc aggtacgcgt caagcatctc aattgctttt gcagatgata
      721 agctatcagg aaggttcgag tgcgtttcga caaagatacc tgtggagtta agttcccgtc
      781 ctttcacgag caacgccgcc gtcacacctg tgacaacgcc ttctttcaac tgcgtggcac
      841 cgcttttttc aaattttttt accacacttt gatttttggt gtaatagtat gcttttggtg
      901 tctcgctctg tcccatgatc ccttcaatac taataatttc ttttgctttc agttgtttat
      961 agagttcgat tagtgcatcg gagatatccc attccaagcc acggatgtcc gttagcgcat
     1021 gaaggataac aagatttttg cttttcacgt aatagatttc gataggctgc actactcgtt
     1081 gttcatggat tgcaatcata ggcatcaaat ctttagaaaa aatttcgccg ataggctttg
     1141 ccttgagatg ttttacaaga tattctgtcg tgatcgtgcc tatcaagcca acaccaggaa
     1201 acccctcgag gattatagga ttttttggct tttctgataa ttttacttcc attgtttttc
     1261 aaggaggcaa gaatattaat aaaggtttgg gttatttttg atacacccac gcacaaagcc
     1321 cactgttcaa cgtgactcgt tttcttcgat actcatcacc ttcatagaca tctaagagtt
     1381 taagatattc ttcttcgatt tccaaaacaa agccgtgtat gtcttcagtt gcatatttat
     1441 cctcttcaat gatgggatag agtatatcat caatggtaat ggttgatttt ctaaatcagg
     1501 agagactatc tggtattcct cttaaaatct ttccaagaat gtttttctga acgtccggtt
     1561 gttgcaatgt tccataccca aataattttt ctgtcgtgca tctcacttca gtattttact
     1621 ttaaaaggtt tgctttacat tggaactaaa gaaagatcct tcctcaagta caatggatgg
     1681 cacggctctt tcagtttgct gagttgcaaa taatatattt tacctgtatt cttcaacaat
     1741 tttgcaagaa catcacgcga gcgatgcatg tacgcgccat catttcccca tgcagcaata
     1801 agaatctccg ccttcttggc aatgctttcg atacatgcat cattttccgg tcccacggga
     1861 tcttccactt tcttcagcac gttcttgtac ggagtacggt aggcaaacaa attaatgacg
     1921 taaaaggaac cgaagccaaa tttctgtgca taggcaatgc atcgtcgaat agtggggtca
     1981 tcgatgtcag cgtctgcagt actgggattg agcatgatga aggaacacga tttctttgtc
     2041 ttatcccaag agcggtacaa ccaataacgg tatttttgac agggagaaat atacgcatct
     2101 ctttccatac agcatcgatt cgtgtacaag tatttgaata ttttggtaga ttttacccgg
     2161 tatattccat attctttttc tctggcgtat ggctttgtgg atatccatgt tgcgctcttt
     2221 tttcatggca gtgatcaatt ttatccctga tggcagcgcg gatgaactcc gtccgacttg
     2281 caaaatggaa atcttctgtt gctttgtcca acgcatcaag taggctttca gagagcttaa
     2341 aagtcatgag tttcataagt atacaataac aagacagagt atataaagaa gactatacta
     2401 aagattatat atgtatatac aataacaata cagcttacat acccatttca tctaaaaacc
     2461 gctgcaccgt cttcacgata tgggcaggct gcgtttgcaa aatcttcgca gtctcagcaa
     2521 gaacatcgcc agcatatttt ttgtgggaaa caagcacctt ttctctcttt cgtttctttt
     2581 tcacaatatc cttccaaaga ataaataact cttctgcacg ccagggaatc tcattgcgtt
     2641 cgcatttcaa aagtttttgc agcgttccta aaatatctcc ttcctgtttc tcttcctgcg
     2701 tcgccgcatt tccagcaaca aacgtgatcc gaacaatgcc atcttggatt tttgaagaac
     2761 tcaatatcct aattttttct gcttctgcgg tattgtcaag gtgcgttccc ccgcacgctt
     2821 caacatctgt gtccttgatg tcaacgatgc gaagcatttt tccaggcgca attcctcctt
     2881 gatagatatt cacgccaaac ttttgctctg cttcatttcg tgtataaaac tttttatcga
     2941 tacgaattcc
//
LOCUS       DATDZU010000066         7847 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_807544, whole genome shotgun sequence.
ACCESSION   DATDZU010000066 DATDZU010000000
VERSION     DATDZU010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7847
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807544"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VJJ79_02235"
     CDS             <1..187
                     /locus_tag="VJJ79_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22568.1"
                     /translation="PKFITTCYTVEYYQCKCCGKQVDAGANLPKGFYDPNVTAMLATL
                     KNEGLSFEAVARFFQET"
     gene            212..940
                     /locus_tag="VJJ79_02240"
     CDS             212..940
                     /locus_tag="VJJ79_02240"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HLC22569.1"
                     /translation="MYNRTNALTSVLAPERERILHAIRKSEFTHLDETGLREDGKNGF
                     VWNASTPTYCAFEYDRSRGAAVAKKLLDNFDGSIITDDYAGYDWYKNRQLCWSHILRE
                     AKDIIDKYEGVDVQAKRLKALYVKAKLAQEKKDKHQFEKLTWELEDIATCYRAAKCPN
                     MFNRLHNRAHLWLHGILHPEVPLTNNHAERCLRKVVLQRNRIGCIRNQKGRNFIAILL
                     SCTTTWRLQGKNLFEQLLKHALIT"
     gene            complement(1161..1331)
                     /locus_tag="VJJ79_02245"
     CDS             complement(1161..1331)
                     /locus_tag="VJJ79_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22570.1"
                     /translation="MPYWRLSALVSYLLTLRSLPIGSLAPLRSCVRTRAGVHSNATAF
                     YPKKDIDDKNDI"
     gene            complement(1486..1917)
                     /locus_tag="VJJ79_02250"
     CDS             complement(1486..1917)
                     /locus_tag="VJJ79_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22571.1"
                     /translation="MIDENTLRAEIQAKKKRMEDLARQETAIRKAEATQQVLDELVNL
                     PPAFMNAGNTHATILRKIVEYDVEVAPQIKRRILKEFYDVHQDPYHKEKGLSHSSQEY
                     TAAEKIAIELRDIQKMDYFKRRTEIARRAEIAEDICRAAGF"
     gene            2019..2756
                     /locus_tag="VJJ79_02255"
     CDS             2019..2756
                     /locus_tag="VJJ79_02255"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLC22572.1"
                     /translation="MVRVSKEHALTQFGLSPREAKVYLAALLTGTATANSIARQAKVE
                     RTTTYDVLKSLTDKGIAARTTRNGKNCFEVIQPKKLISILEERKRFLSDVLPELELLS
                     KVNLEKPKVKLFEGKEGIKSMFYDIYDLGLDFDVYANSALISFLRFDFDKFVQLRTKK
                     EIFVRVIHEKSKETFELIKKDKKELRDTRFIDDFHLPAATLIYGNKVAIVTFSQIEPV
                     GIVIDNKDTADAQRVVFEKLWSIAKKK"
     gene            complement(3033..3884)
                     /locus_tag="VJJ79_02260"
     CDS             complement(3033..3884)
                     /locus_tag="VJJ79_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22573.1"
                     /translation="MSSKNTSSDANNVLCWALILGLVILAIKYEKEITKLTTGIENFF
                     FLSFVLLLVFGVPFGIFIWLTVRAVRKQFERPIAASTPTVQTSISQTKKAEPLVQANP
                     APQENIIQYEMPKRSMIIDTERLLSTNLHVADHLSDEEKDYLQHNWYIAKEFVPFGEH
                     RRQLHYIRERKPESLEHTFVVFTIVNHLRNRGVEKVETFTTQRPDVVFTCDSKEYAIE
                     VETPFFLKKKHRRLLAKAEVNNKTYPKRWCFVVTRSAYKRSFGKYGKVLTRATILDFL
                     EGWLPPE"
     gene            complement(3850..5133)
                     /locus_tag="VJJ79_02265"
     CDS             complement(3850..5133)
                     /locus_tag="VJJ79_02265"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HLC22574.1"
                     /translation="MGVGNNLVHGLLSSGRVWRPTMDTTDYHRFWKQYQTALVRLAES
                     ELRDEDKMLLREFARDSKAYGIGYARLTKLVRTLVVIGEHLTKPFKEVTVDDLKGLLH
                     HFETGDYSVWTRHDIKVILKQFYKWIDGEDYPKLVRWINTTIPFREKPMTHESALLTE
                     DEINKVIDTADHPRSKALIAVLAESGARIGEIGNLTIGQIKIDPSGAVLTVSGKMGRR
                     RIRIVSSTAYLVKWLDIHPEKENPYAPVWINIGTINYHKQITYEGIRKVIIDTFKRAG
                     IKKRCHPYIFRHSRATQLARHLTEFQMCSYFGWAQGSDMPATYVHISGKDLDEDILRI
                     NGMKPGEKPISFKPSARACPRCKEINAPNALYCCKCAEIVDPTLAIKSKMEEVNKPAN
                     MIQSPFMEWLGKQPDVQKMLRYKSDEFKEYIERRE"
     gene            complement(5628..6053)
                     /locus_tag="VJJ79_02270"
     CDS             complement(5628..6053)
                     /locus_tag="VJJ79_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22575.1"
                     /translation="MASEMNWKECVDEGIITQSIPDEERSNQMLTMVNLRLKFWDKKV
                     ADEFIVLKVEAYYDIIKELIFAHLYKNGYNCTNHLCLIAYLKEKIKDFDFETQRIDEL
                     RKVRNEINYRGLTIKKDYLERNELEFKNIIKRLKEELEE"
     gene            complement(6069..6599)
                     /locus_tag="VJJ79_02275"
     CDS             complement(6069..6599)
                     /locus_tag="VJJ79_02275"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HLC22576.1"
                     /translation="MDEILKNNTYKILELFIEFPVKDFSVRGIARNLKLSHATVLKYI
                     AYLEKLNLVKKKEATLYPTYFANTENQKYKFYKRNWLVFKINESGLIEHLQKEVLPSS
                     IVLFGSGAKATSTEKSDIDIFVEANEAKLDFTKYEKKLNHKINLLFEQNINNLSKELR
                     NNMINGIVLYGFIKIQ"
     gene            complement(6669..7076)
                     /locus_tag="VJJ79_02280"
     CDS             complement(6669..7076)
                     /locus_tag="VJJ79_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22577.1"
                     /translation="MENIEQKLALVEKVPGLKEHLDGVRRYVPRGLLNGSISLDDLQV
                     KPEEQAAAYIVEQHEWMASGCSGIEYSVEIGVFRQGKSTSSGKIVCRHMHNYRYDDWR
                     KYYTKLKDFTITQDKVRVVVASKDAEGAFVFDL"
     gene            7203..7715
                     /locus_tag="VJJ79_02285"
     CDS             7203..7715
                     /locus_tag="VJJ79_02285"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLC22578.1"
                     /translation="MDASLITEAGLTEGEAKVYLALLKLWSSTTGPIVKESGVANSII
                     YRILDGLIEKGLASYVIREKTKYFQASEPERLLGYIEERKKQLDENKEKIKKLLPQLK
                     PLAKPVETRVELFEGFKGFITAWEHQYTKLKGRNEYHSWGVYPVQEERFNLYWQRDHL
                     KRIKQGIKSV"
BASE COUNT         2217 a         1733 c         1584 g         2313 t
ORIGIN      
        1 gccaaagttc atcaccacgt gttacactgt agagtattat cagtgcaaat gttgcggcaa
       61 gcaggtcgat gcaggagcca acctcccaaa aggattttac gatccaaatg taacggcaat
      121 gcttgcaacg ttaaaaaacg aaggtttgtc gtttgaagcg gttgcccgct tctttcaaga
      181 aacttagaag ttaccaataa caagcgttgc cgtgtacaac agaacaaatg cattaacatc
      241 tgttcttgcg ccggaacgag aacgtatttt gcacgcgatt cgcaagagcg aatttaccca
      301 tcttgacgaa actggcttgc gggaagacgg aaaaaacggg ttcgtttgga acgcaagcac
      361 gccgacatat tgcgcgtttg agtacgaccg cagccgcggt gctgcagtcg ccaaaaaact
      421 gcttgataat ttcgacggta gcattatcac agacgactat gcaggatatg attggtacaa
      481 aaatcgccaa ctgtgctggt cccatatctt gcgcgaagca aaagatatca tcgacaagta
      541 cgaaggagtt gatgttcaag ccaagcgctt gaaggcgctc tatgttaaag cgaaacttgc
      601 tcaagagaaa aaagacaaac accaattcga aaagctcaca tgggaactag aagatatcgc
      661 gacctgttac cgtgctgcaa aatgccccaa catgttcaac cgactgcaca accgcgcaca
      721 cctctggctg cacggcattt tgcacccaga agttcctcta accaacaacc acgcggagcg
      781 atgcctccgc aaagtcgttt tgcaaaggaa cagaatagga tgcatccgca accaaaaagg
      841 acgcaatttc attgcaattc tcctgagttg cacgacaact tggcgattac aaggaaaaaa
      901 cctattcgaa caactactca aacacgccct cataacttaa tacgtactac taatttagga
      961 atcattagga gatgttagga gtcgctctag agaagaaaat ttacataaag tttgaataaa
     1021 ccttaagtaa agcactttac caaaatctta cgaaagcaac ttgcacacct ctctgttgag
     1081 tgcatacgac gacaaatgca cacctaaaaa acgtctgcca acattttttg aaaatctgcc
     1141 ctaagatttt gcagattttt tcaaatgtca tttttgtcgt cgatatcttt cttagggtag
     1201 aaggctgttg cattactatg cacgcccgcg cgtgttcgca cgcaggaccg tagaggtgcg
     1261 aggcttccga tagggagaga cctgagcgta agcaagtagc tcacgagtgc ggaaaggcgc
     1321 cagtaaggca tactctcccg agcgactgaa ctcagggcac gtggtcgttt ctggctgtgg
     1381 gagagagcgt gctacactca cccccagata ctcacctgag cgtggcgggt tgcccgtctc
     1441 atctatggac tgaagtcacg cagagttcac cggaggctcc ctaatttaga aacctgccgc
     1501 ccgacaaata tcttctgcaa tctcagccct tctcgcgatt tcggttcttc tcttaaagta
     1561 gtccattttt tgaatatctc tcagctcgat tgcaatcttt tctgcggcgg tatactcttg
     1621 ggaagaatgg ctcaggcctt tttctttatg atagggatcc tggtggacgt cataaaattc
     1681 cttcagaatt ctccttttta tctgtggtgc aacttcaaca tcgtactcaa cgatctttct
     1741 gaggatagtg gcatgagtat ttccagcatt catgaacgcg ggaggcaagt ttaccaactc
     1801 atctaaaacc tgttgggtgg cttctgcttt ccttattgct gtttcttgcc tcgctaagtc
     1861 ttccattctt ttcttcttag cttgaatttc agctcggagg gtgttctcat caatcatttt
     1921 aaaatcgtaa cttcgaactg atgaacgact atatctatat taatgtaagt tgacgaaaaa
     1981 ccacaacatt attatagaat aaaatgatcc attattaaat ggtacgcgtg agcaaggaac
     2041 atgcattgac tcaatttggg ctaagccctc gagaagcaaa agtatatctt gcggcacttc
     2101 ttacaggaac tgcaacagca aactccattg ctcgacaggc gaaagtagag cgaacgacaa
     2161 cgtatgacgt cttgaaatcc cttactgaca aaggaattgc agcgcgaaca acaaggaatg
     2221 gtaagaactg ttttgaagtc attcaaccaa agaaattgat ctctattctt gaagaacgaa
     2281 agcgcttcct ttcggacgta ttgcctgaac ttgaattact ctcaaaagtg aatcttgaaa
     2341 aaccaaaggt aaaattgttc gagggaaaag aaggcataaa gtcaatgttt tacgatatct
     2401 atgaccttgg attggatttc gacgtatatg cgaattccgc actaatctca ttcttacgtt
     2461 tcgattttga caagttcgtg cagcttcgca caaaaaaaga gatttttgtt cgtgtcattc
     2521 atgagaaatc aaaagaaacc tttgagctca ttaagaaaga caaaaaagaa ttgagagata
     2581 caagattcat tgacgacttc catcttcctg ctgcgactct catctacggg aataaggtcg
     2641 caatcgttac attctctcag attgaaccgg tggggatagt gatcgataac aaagacacgg
     2701 cagacgctca gcgagtggtt tttgaaaaat tatggtcaat tgcaaagaag aagtgatggt
     2761 tcttactgga ctcattcgga tcaactcaac tgcttcctag ttgtttccat atttttatcc
     2821 atgaatcgtg caggaaaaat cccgtgcgat gccatgtctt gctcagatcg aactcaagtt
     2881 cagatgcaca cctaagctgg accaacattc ggattctgcc aatcgcaggt gtgcatttac
     2941 gtataacccg cacgcctaaa tttttctcat agttcacgtc aataaatgca caccaaacac
     3001 agggcaaaga gtggagcgtt atatatgtct ccctactctg ggggaagcca gccctctaag
     3061 aagtcaagta ttgttgccct ggtcagtact tttccatact tgccaaagct tcgcttatag
     3121 gcactgcgag tcactacaaa gcaccatcgc ttgggatagg ttttattgtt gacctctgcc
     3181 tttgccagca gtctgcggtg ctttttcttg agaaagaacg gggtttccac ctctatcgca
     3241 tactccttgc tatcacacgt aaagacaacg tcaggtctct gggtggtaaa ggtctcgact
     3301 ttctcaacgc cacgattccg caagtgattt acaatagtga agactacaaa cgtgtgttct
     3361 aaactctcgg gctttcgttc gcgaatgtaa tggagttgtc tccggtgctc accaaaagga
     3421 acaaactcct ttgcaatgta ccagttatgc tgaaggtaat ctttttcttc atcactgaga
     3481 tgatctgcca catgaagatt cgtgctcagc aaccgttctg tatcaatgat cattgaacgc
     3541 tttggcattt catattgaat tatattctcc tgcggtgcag ggttcgcctg aaccaagggt
     3601 tcagcctttt ttgtttgaga aattgaagtt tgcactgtcg gggtcgatgc cgcaatcggt
     3661 cgttcaaact gttttcggac tgctcttacc gtgagccaaa tgaaaatacc gaaaggaacc
     3721 ccaaagacca gcaataatac aaaagaaaga aaaaagaagt tttcaatacc cgttgttagc
     3781 ttagtaatct ctttctcgta ctttattgct aggatcacta atccaagaat aagtgcccag
     3841 cataggacat tattcgcgtc gctcgatgta ttctttgaac tcatcggatt tgtacctcag
     3901 cattttttgt acatcgggtt gcttccccag ccactccata aacggacttt gaatcatgtt
     3961 ggcgggtttg ttgacttctt ccatctttga tttgatggcg agtgtagggt caacgatttc
     4021 tgcacattta caacaataaa gcgcattggg agcattgatc tctttacatc ttggacatgc
     4081 ccgtgcgctc ggcttgaacg aaatcggctt ttctcctggc ttcatcccat taatacgaag
     4141 aatatcttca tccaagtctt taccagaaat atgcacatac gtcgcaggca tatcagaacc
     4201 ttgcgcccac ccaaaatagc tacacatttg aaactccgtt aaatgacgcg caagctgcgt
     4261 tgctcttgaa tgcctgaaaa tatacggatg acatcgtttc tttattcctg cgcgtttaaa
     4321 cgtgtcaata attaccttgc gaatgccttc atacgtaatt tgcttatggt aattgatcgt
     4381 cccgatattg atccacacgg gagcgtacgg attttctttc tctggatgaa tgtcgagcca
     4441 tttcacaaga tacgccgtcg atgacactat gcggattctt cttcgaccca tcttgccaga
     4501 aacagttagc actgctccgc tcgggtcaat tttaatttgt ccgatggtga ggttgcctat
     4561 ctctccaatt cttgcaccac tctcagctaa aactgcaatc agagccttgc ttcgtggatg
     4621 atctgctgtg tcgataactt tattgatttc gtcttccgtc aataaagcag actcgtgagt
     4681 catcggcttt tctcgaaacg ggatagtcgt gttaatccac cgcacaagtt ttggatagtc
     4741 ctcgccgtca atccatttgt aaaattgttt caagataact ttgatgtcgt gtcttgtcca
     4801 aacggagtaa tctcctgttt caaaatggtg gagcagacct ttcagatcat ccacagttac
     4861 ttccttgaac ggtttggtta aatgctcgcc gatgacaaca agtgtccgta caagttttgt
     4921 cagacgagca tagcctatgc cgtatgcttt agaatcgcgt gcgaactcac gcaataacat
     4981 cttatcttca tctcttaatt ctgattctgc taatcgcact aatgcagtct ggtattgctt
     5041 ccagaatcga tggtagtctg tcgtatccat tgttggtctc cagactcttc cagaagaaag
     5101 taaaccgtga acaagattgt tccccacacc catcaccccc ttcaaggacc ttagttacct
     5161 gcacaatagg tataaaaaac aggtataacg ccatggatgt tcccgcgaat gtgtccacgg
     5221 atgcatccaa agtcccataa caccctagtt atacgtccct acccgtaggg cttgtggccc
     5281 acggcggccc acaactttga tttttcaaag gttcgaagcg caaatgccgc attgacaaat
     5341 cttttttggg aaaacccaca tttaagattt gtagcgcata ttgagctatg gtcttcttag
     5401 gggatttttg tttaagtact tctgggccca atctatgcct actcggatag aaaacgcatc
     5461 tccgtttccc acccaaattt ggtgtgggct tacgaagatg gctagagagc ctccggaggg
     5521 acgtgaccat aaaggtacac tttttctgat tttgggggct ttgaccaatg aattggcgta
     5581 cttctggacg ttgttgtttt ccagtccact aacattaggg gcaggcatta ttcttccagt
     5641 tcctctttca gtcgtttgat gatgtttttg aactccaatt cgtttctttc cagataatct
     5701 ttcttgatgg tcagccctct ataattgatt tcatttctca ctttcctcaa ctcgtcaatt
     5761 ctctgggttt caaaatcaaa atctttaatc ttttctttaa gataggcgat aagacaaaga
     5821 tgatttgtgc agttataacc attcttgtaa agatgagcaa aaataagctc tttaataata
     5881 tcgtaatagg cctcaacttt caagacgata aactcatctg ccactttctt atcccagaat
     5941 ttcaggcgaa gattaaccat tgtcagcatt tggtttgaac gttcctcatc tggaatactc
     6001 tgagtaataa tcccttcatc aacacattct ttccagttca tctcgcttgc catgttagcc
     6061 ttccatcgct attgaatttt aataaagcca tataaaacaa taccgttaat catattattt
     6121 cgtagttctt tagagaggtt attaatattt tgctcaaaca ggagattaat cttgtggttt
     6181 agttttttct cgtattttgt aaagtccaat tttgcttcgt ttgcctcaac aaaaatatca
     6241 atgtcacttt tttctgtaga cgtggctttg gccccactac caaaaaggac tatagatgaa
     6301 ggtaaaactt ctttttgaag gtgctcaatc agccccgatt cattgatttt gaaaacaagc
     6361 cagtttcgct tgtagaactt gtatttttgg ttttccgtat tggcaaagta agttggataa
     6421 agagtggctt ctttcttttt aacaaggttc aacttttcaa gataagcaat gtactttagc
     6481 acagtcgcat ggctaagctt caagtttcga gcaatccctc taactgaaaa gtcttttacg
     6541 ggaaattcta taaagagttc caatattttg taggtgttgt tcttgagtat ttcatccatt
     6601 ttaacccatt ggttagttat ttgaccagat ggtcagaaaa atgaccaatg agtataaata
     6661 actttcgttt acaggtcgaa aacaaaagcg ccttctgcat cttttgatgc cactacgact
     6721 cttactttat cttgtgttat tgtgaaatcc ttaagtttag tgtaatattt acgccaatca
     6781 tcatagcgat aattatgcat gtgtctacac acgatttttc ctgaagatgt gcttttgcct
     6841 tgtctgaaaa cgccaatttc cactgaatat tctattccgc tgcatcctga tgccatccat
     6901 tcgtgttgtt ccacaatgta tgctgcggct tgctcttctg gtttgacttg caaatcatcc
     6961 aaggaaatcg atccgttcaa taaaccccta gggacatatc tacgcacacc atctaagtgt
     7021 tccttcagtc ctggcacttt ttctaccagg gctaattttt gttctatgtt ttccatttta
     7081 atcatccttg tttttcatca cttccgcata gttaacttat tctttctatt ttaatcttat
     7141 gccaccacta ttggtggtat gagtgtaaag atttataaat cgaaaaccct gtctttatgc
     7201 gtatggacgc atcgctaata acagaagcag gattaacgga aggagaagca aaggtctacc
     7261 ttgctcttct gaaactttgg tcctcgacga ctggaccgat cgtgaaagaa tcaggagttg
     7321 caaactcgat tatttacagg atcttggacg gtcttattga gaaagggctt gcgtcgtatg
     7381 ttattcgcga gaaaacaaag tatttccaag catcagaacc agagagacta ttaggctata
     7441 tcgaggaaag aaagaaacag ctggacgaga acaaggagaa aatcaagaaa ttactacctc
     7501 aacttaaacc attagcaaag ccagtcgaaa ctcgcgtaga attattcgaa ggtttcaaag
     7561 gattcataac cgcatgggaa caccaataca caaagctaaa aggaagaaac gagtatcatt
     7621 cgtggggcgt ctatccagta caagaagaaa gattcaatct atactggcaa cgcgaccatt
     7681 tgaagagaat aaagcaaggc atcaaaagtg tttagtatgg aaatcggtta acattttagg
     7741 ttgtttttaa atagtggatt tctggatgca gttatttgtg gtgatggagc taaaaatgac
     7801 gtacaagtta aatgaaaaaa acgtaagtgg atcgttagcc aactgag
//
LOCUS       DATDZU010000067         3671 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1969193, whole genome shotgun sequence.
ACCESSION   DATDZU010000067 DATDZU010000000
VERSION     DATDZU010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1969193"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VJJ79_02290"
     CDS             <1..581
                     /locus_tag="VJJ79_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HLC22579.1"
                     /translation="QTGGFTLQASFLVLSGIVLSFIVEKIVHWRHCHYIDHNHGKKDP
                     VHPFAVMSLLGDAVHNFLDGIVIGVSYLVSIPVGVATTLAVVFHEIPQEIGDFGVLLQ
                     GGFTKGKALFYNFLVALTSFVGVILALFLNRYVVALPQYLLPLAAGGFLYIAGSDLIP
                     ELHKEVKSWKSILELAMFLLGIAVMAVLLLWG"
     gene            complement(583..2487)
                     /locus_tag="VJJ79_02295"
     CDS             complement(583..2487)
                     /locus_tag="VJJ79_02295"
                     /inference="COORDINATES: protein motif:HMM:TIGR03296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M6 family metalloprotease domain-containing
                     protein"
                     /protein_id="HLC22580.1"
                     /translation="MKKWLILLIVLLVFPVVSATSIPPYEVDEVGNKIDIQPLIVAKG
                     GPPAFEHYFQGCPVVVQEEEGKPKFFYATADAEGRLQPTTFEPKKFKPIEVEEQGIAC
                     GTKFREQRPVAPGSIIPRWQQPPENIQKSVALAETYGYGVEVNDIGQYEFLNPSLEKA
                     VDEGTVQPKLPEPKPVINIITGGVTYEANFEQKKLSAIVIPVQFSDEEASLSVEELKT
                     NFFGEHGLGDYYDEQSYGNLHILGDIAPKWYTLKEKMGYYGNNYEENIEKMIVEAIRA
                     ADADVDFSQYDTNDDSLVDSLFVVHAGNADEETGSGNGEEIWSHYFTISPIEVDGVTI
                     MDYETVSEMSPVGIVAHEFGHYLGLPDLYDTVVDDGSSKGVGEWSIMGYGGFLDAPAS
                     LDPWSKEYLGWISQDQYLEIENTNFYKIYQDNAQQGTTYNRITISDTEQFFIENRHRT
                     KLMNDDEAAGLMIWHIDASVMDERGTWNGCSGTRWDCNAVNGNAEHKLIDVEEAGGKQ
                     DLDEGDMGDDGDVWTIFCSAFGGCEQSIFSKDSMPSSEPYESSDKNVVISVFSGKGTS
                     MEFSASIDGTILEAPSLEEAQGNKNYLTIILVSIFSVVILSSGGYIGYSVLKKKKTPV
                     SPAEYQNFKS"
     gene            2568..3200
                     /locus_tag="VJJ79_02300"
     CDS             2568..3200
                     /locus_tag="VJJ79_02300"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HLC22581.1"
                     /translation="MNTVLIFCAHSDDEAIGVGGTIAKYVAEKKDVIKVVFSHGEKSI
                     PHLQEEVVKKARLQETDAASAFIGIKETICLGLKDTKLKSEVQQPTVIRRVKKLILQY
                     KPEKIYVPSALDPHPDHQAVNGVVLQIVDSLSKHYPVYAYEVWNVVKETHPRVYVDVS
                     LYMKKKLTYIRMFKSQWGYMFLLYLPTLFRSIVYGRKNGCTYAERFYKIR"
     gene            3197..>3671
                     /locus_tag="VJJ79_02305"
     CDS             3197..>3671
                     /locus_tag="VJJ79_02305"
                     /inference="COORDINATES: protein motif:HMM:NF024918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HLC22582.1"
                     /translation="MKVLFVVSGIGYGDAIREHVNVVALKKKFPQAHVMVAGYDNSYH
                     YFHDKYPTVRINGYKLIGTSLRVSAVRFGLRNLFLPAFWVLGTLKVRLRTFNFIPDII
                     VSDFEPVGISLARVLFKKCVVVFGYDPLLYKAYAKKHKISYKMKIEAAYFEKLYDQ"
BASE COUNT          917 a          768 c          785 g         1201 t
ORIGIN      
        1 cgcaaactgg cgggttcaca ttgcaggcgt cttttcttgt cctttcagga attgttctat
       61 cttttatcgt tgagaaaata gttcattggc ggcactgtca ttatattgac cacaaccatg
      121 gtaaaaaaga ccctgtgcat ccgtttgcgg ttatgagcct tcttggagat gccgtgcata
      181 attttctcga tggcatagtc attggtgtaa gttatctagt aagtattcct gtcggtgtcg
      241 caacgaccct tgctgttgtg ttccacgaaa ttccgcagga aattggagac tttggagttt
      301 tattacaagg gggatttaca aaaggaaaag ctttgttcta taattttctt gttgcactga
      361 cttcttttgt cggtgtgatt cttgcgctct tcctaaatag gtatgtggtt gcactgccgc
      421 agtatcttct ccctcttgct gctggcggat ttctttatat tgccggttct gatttaattc
      481 ctgagctgca taaagaagtc aagtcgtgga agtctattct agaacttgct atgttcttgc
      541 tcggtattgc tgtcatggct gtactcttgc tttggggata agttagctct taaagttctg
      601 atactctgca gggcttactg gtgtcttttt ctttttcaaa acagaatagc ctatgtatcc
      661 gccactgcta aggatcacga cagaaaaaat gctcaccagg atgatggtca gataattttt
      721 atttccctgt gcttcttcca gtgatggggc ttctagaatc gtgccgtcta tcgatgcgga
      781 aaattccata gatgtgcctt ttccagaaaa cacgctaatc actacattct tgtccgagct
      841 ttcgtacggt tcgctgctcg gcatagaatc tttagagaaa atgctttgtt cacagccacc
      901 aaacgcggaa caaaaaattg tccagacatc gccgtcatca cccatatctc cctcatccag
      961 gtcttgtttt cctccagcct cttccacgtc gattagcttg tgctcagcat ttccgtttac
     1021 tgcgttgcag tcccatcgtg ttccagagca tccattccat gttccacgtt cgtccatcac
     1081 agatgcgtca atgtgccaga tcataagtcc agctgcttcg tcatcgttca ttagctttgt
     1141 cctgtgcctg ttttcaataa agaattgttc tgtatccgag atggtaatgc ggttgtatgt
     1201 cgttccctgc tgtgcattgt cttgatatat tttgtaaaag tttgtattct cgatttcgag
     1261 atattggtct tggcttatcc atcctaggta ttcctttgac caaggatcga gacttgccgg
     1321 tgcgtctaaa aacccgccgt aacccatgat gctccattct ccaacgccct ttgaactgcc
     1381 gtcgtcaacg actgtatcgt acaaatccgg cagacctaga tagtgcccga actcgtgcgc
     1441 aacaattcca accggactca tttcgctcac cgtttcatag tccataatcg ttaccccgtc
     1501 aacttctatc ggggaaattg taaagtagtg cgaccagatt tcttcgccat tgccagaacc
     1561 tgtttcttca tctgcatttc ctgcatgcac cacaaataag ctatccacaa gactgtcatc
     1621 gtttgtatcg tactgtgaga agtccacgtc tgcgtctgct gcgcggattg cttcaacaat
     1681 cattttttca atattttctt cgtaattgtt tccatagtat cccattttct ctttaagcgt
     1741 ataccatttt ggtgcgatgt cgcctaggat gtgcaagttt ccataggact gttcgtcata
     1801 gtaatctccc aacccatgtt caccaaagaa gtttgttttc aattcttcta ctgataaaga
     1861 tgcttcttcg tcagagaact gtactggaat tacaattgcg cttagttttt tctgttcaaa
     1921 atttgcctca taagtcacgc ctcctgtgat aatgttaatt actggttttg gctctgggag
     1981 tttaggttga acagttcctt catctactgc tttttctagc gacgggttaa ggaattcata
     2041 ttgcccgata tcgttaactt caacgccata gccgtatgtt tctgccaatg ctacactctt
     2101 ttgtatattt tcagggggtt gctgccagcg cggaattatt gatccaggtg ctactggtct
     2161 ttgttctctg aattttgtac cgcaagcaat tccctgttct tctacttcta tcggcttaaa
     2221 tttttttggt tcaaacgttg ttggctggag gcgtccttct gcgtctgcag ttgcatagaa
     2281 aaacttaggt tttccttcct cttcttggac tacgacagga caaccctgga aatagtgctc
     2341 gaaagcaggc ggaccgcctt ttgcgacaat aaggggctgg atatcaatct tgtttcctac
     2401 ttcgtcaacc tcatacggcg gaattgaagt tgcactcacc acaggaaata caagaaggac
     2461 tatcagtagt atcaaccatt ttttcattat aagtctataa ttaattgaag gatttaaagg
     2521 tttctcagga atatttttaa ataaagaaga gcattatgtt atcaaatatg aatactgtct
     2581 tgattttttg tgcacattct gatgatgagg ctataggagt tggggggact attgcaaagt
     2641 atgttgcaga gaaaaaggat gtgattaagg tagtcttttc acatggagaa aaaagtattc
     2701 cgcacctgca ggaagaagta gttaagaaag cacgattgca agagacggac gctgcgagtg
     2761 catttattgg catcaaagag actatttgtc tgggattaaa agatacaaag ctgaagagtg
     2821 aagtacaaca acctacagtc attcgcaggg tgaagaagct cattcttcag tacaagccag
     2881 aaaaaattta tgttccatct gctcttgatc cgcatccaga tcaccaagct gtgaacggcg
     2941 tcgtgcttca gattgttgat tctctttcga aacattatcc tgtctatgcc tatgaagtat
     3001 ggaacgttgt taaggaaacg cacccacgtg tgtacgttga tgtttcattg tatatgaaaa
     3061 aaaagcttac ctacataaga atgtttaaaa gccagtgggg ctatatgttt ttgttgtacc
     3121 ttccaacact attccgtagc attgtgtatg gtagaaaaaa tggatgtaca tatgcagaga
     3181 ggttttacaa gatccgatga aagttctctt tgttgtctcg ggaattggat atggtgatgc
     3241 gatacgggag catgttaacg ttgttgcatt gaaaaaaaag tttccgcagg cgcatgtgat
     3301 ggttgcagga tatgataatt cctatcacta tttccatgac aagtatccga ctgtacgaat
     3361 taacgggtat aaattgatag ggacatcgct gcgtgtcagt gcggtgcgtt ttggtttgcg
     3421 aaacttgttc ttgccggcgt tctgggttct tggcacgttg aaagtacggc ttcgtacgtt
     3481 taactttata ccagatatta tagtttctga ctttgagcca gtaggtattt ctcttgcgcg
     3541 tgtgctattc aagaaatgtg tcgttgtttt tggctatgat ccgttattat acaaagcata
     3601 tgcgaagaaa cacaaaataa gttataagat gaagatcgag gccgcatact ttgaaaagtt
     3661 gtatgaccag g
//
LOCUS       DATDZU010000068         4301 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_191147, whole genome shotgun sequence.
ACCESSION   DATDZU010000068 DATDZU010000000
VERSION     DATDZU010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191147"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VJJ79_02310"
     CDS             <1..448
                     /locus_tag="VJJ79_02310"
                     /inference="COORDINATES: protein motif:HMM:NF013875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HLC22583.1"
                     /translation="MTRHVYPKNKVLLGTFATYSRYAGPREALFTALCRKNFGCSHFI
                     VGRDHTGVGKFYHPKASHTIFDRFPDLGIVPIRFDNVFYSEKMQTHIHEREHPTHPAD
                     DRLLISGTQARKMFESGEVPPSWFMRPEISQLIADAVKRGEEVFVR"
     gene            complement(458..2059)
                     /locus_tag="VJJ79_02315"
     CDS             complement(458..2059)
                     /locus_tag="VJJ79_02315"
                     /inference="COORDINATES: protein motif:HMM:TIGR01488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family phosphatase"
                     /protein_id="HLC22584.1"
                     /translation="MHLTDFAKWTGVTEQQARIVSIIKRLQEQKQPTRPIDIEKEYIS
                     ETKTFIQKSNLFAQLKLLQEKEIISKNGQSQYAVNIEGIRNIILSKKSYFSTEIENIS
                     KFALETEKFLENLAQQTTVHVEHLSETELYKKLAFYLKNATAFYLGCDFPHYAYSLSI
                     CGNSQQAAYIETLGARIADEKFTLFCLCTYKTDEIVGRLSKKYTNKEFIREEIQRAHK
                     EAQEKTIQFNTIDLRKTATPFNFALIEDAEHRGSLFMFLKDSKGEITGGIVISSPETL
                     KHLKQHFLAQMATASSLKSKDDFVRLQKETLMLPSQETKNKLIAFDVNRVFTVNHTTV
                     ELAELTGKKEKVSEFITKQIEGKMGVQEAIEESAKLLKGLSVKMIEQLVPTIPLMKHL
                     EQGLKKLKNAGYHLIAISTGFSHVITPLCRSLGIDDIYCNVLEEKNGKLTGVILEKNV
                     VTDNVKYYIVKYLLEKYSIPLENSISVGDGFSDLDLLKATKVRIAFNPTKSMIRLFEE
                     RSPLITHLITEQDFGVLANEIMKRV"
     gene            2225..3142
                     /locus_tag="VJJ79_02320"
     CDS             2225..3142
                     /locus_tag="VJJ79_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22585.1"
                     /translation="MVKTKVVSSDLNGTCTTTTKEQVLYKDTMGTSDHTMSHMLGFYV
                     GTEAFQEAFRVFKQQTSGRATMQEAFGTAAHFYRGITLRQAIEYTQPRQVVPTPQNNP
                     QLMQYIAGFWDFLAHCAQQNVPFVINSTGYSVTIAAIKEEARRRFNGQSVIHGQIGNR
                     LIFAEKPHPGLVLSERELETLVRDFFDNPADPIYDEIIATGHIELGLPTEAAKAEILL
                     KEYVPHHFPEVKPEEVMHIGDTFGDFGGILGVAQAGGKGVAFNYNQALEDRLKIEIAQ
                     NPAIKDHVYFIEPKNEKSDFGKIKPLLEC"
     gene            3144..4070
                     /locus_tag="VJJ79_02325"
     CDS             3144..4070
                     /locus_tag="VJJ79_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22586.1"
                     /translation="MIKKRITSPEGREQPLFICEKPLAQEEMHITIYGLDDLASIRAE
                     NYVKYGSLPVEIPSWNAGTLHIRGRDPCAVELKNLELHVSSALHSQAIRSRKIPEVED
                     DFPVTVTGIIEVESSVLTGIRRGTVQGNKLSVIPLGYNDAGKHPIEQFYEEAQEEAAL
                     TKDFVDSPVVLGAQVDPDFTNGFNIVIYAKSRTSMSTVLHRHGGFLAIHQHAQCQALL
                     KGKGTPNSTQVRKTGEEAVQSYSGGSLGVDAGDHFPLLFLSSSQVEEVVAKRCIEEVI
                     DDRLTGEKRSYPVMGITLGALMIYRNYCAARI"
     gene            4107..>4301
                     /locus_tag="VJJ79_02330"
     CDS             4107..>4301
                     /locus_tag="VJJ79_02330"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015188067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HLC22587.1"
                     /translation="MLCLNSPPMSLVLWFTGLSGSGKSTLAEALKKELEAHWKTVEIL
                     DGDVIRNTLHQKLGFSREDIR"
BASE COUNT         1125 a          925 c          953 g         1298 t
ORIGIN      
        1 catgactcgg cacgtgtatc cgaagaacaa agtgctgctg ggcacgtttg cgacgtactc
       61 ccgctacgcc gggccgcggg aagcactctt taccgctttg tgccgcaaga atttcggctg
      121 cagccacttc attgtggggc gggaccatac tggagttgga aaattctacc atcccaaagc
      181 atcgcacacc atctttgacc ggtttccgga tttaggcatt gttcccatac gctttgataa
      241 tgtgttttac tcggagaaga tgcaaaccca cattcatgaa cgcgagcatc caactcatcc
      301 cgccgatgat agattgctca tcagcggcac gcaggcacgg aagatgtttg aaagtggaga
      361 agtgcccccg agctggttca tgcgaccgga aatctcgcag ctgattgccg atgcagtgaa
      421 gaggggcgaa gaggtttttg tgagataacc gctcagtcta cactcgtttc attatctcat
      481 tagcaagtac accgaagtct tgttcagtta tgaggtgggt gatgagggga gatctctctt
      541 caaacaatcg tatcatactc tttgtagggt taaatgctat cctcactttg gttgctttaa
      601 gcagatcaag gtcagaaaat ccgtctccta cgctgatgct gttttctagg ggtattgaat
      661 atttctcaag aagatatttt acgatgtagt acttgacatt gtctgttacc acatttttct
      721 cgaggataac gccagtcaac tttccatttt tttcttccaa cacgttacaa taaatatcgt
      781 caatacccaa cgacctacag agtggcgtaa taacatgtga aaatccagtt gagatggcga
      841 taagatgata cccagcattc tttagcttct ttagtccttg ttccagatgt ttcatgaggg
      901 gaatcgtggg gacaagctgt tctatcattt ttactgataa tcctttcaga agtttggcgc
      961 tttcttctat tgcttcctgc acacccattt ttccttcgat ctgttttgtg ataaactcgg
     1021 atactttttc ttttttcccg gtgagttcgg caagctccac agtggtgtga ttgacggtga
     1081 acactctgtt cacgtcgaaa gctatcagtt tattctttgt ttcttgagaa ggcagcatta
     1141 gtgtttcttt ttgtaatctt acaaaatcat cttttgattt aagagaagat gccgttgcca
     1201 tctgggcgag aaaatgctgt ttgaggtgct tcagcgtttc aggcgaacta ataacgatgc
     1261 ccccggttat ttctcccttc gaatctttca aaaacataaa gagcgatcct ctatgctctg
     1321 catcctctat gagcgcaaag ttgaaaggtg ttgctgtttt tctgagatca atggtattaa
     1381 actgtattgt tttttcctga gcctctttgt gtgcccgctg tatctcttcc cggatgaact
     1441 ctttattggt gtacttcttg ctgagccgcc caacgatttc atcggtctta tatgtacaaa
     1501 ggcaaaataa agtgaatttc tcatcagcta tccttgcacc gagggtttcg atgtacgcgg
     1561 cctgttgaga attgccgcaa attgaaagcg aatatgcata atgggggaag tcgcatccta
     1621 aataaaaagc ggttgcgttt ttcagataaa aagccagttt tttatagagt tccgtttctg
     1681 agaggtgctc aacgtgcact gttgtttgct gcgcaagatt ctccaaaaat ttctctgttt
     1741 ccaatgcgaa tttgcttatg ttctcgattt cggttgagaa atagctcttc ttggagagaa
     1801 tgatgtttct tattccctca atatttactg catattgcga ttgaccattt tttgatataa
     1861 tctctttttc ttgcaacagc tttaactgag cgaacaggtt tgacttctga ataaatgtct
     1921 tcgtttcact gatgtattct ttttcaatat caatcggcct agtcggttgt ttctgttctt
     1981 gcagccgttt gattatagaa acgattcttg cctgctgttc cgtgaccccc gtccatttcg
     2041 caaaatctgt taggtgcatt gcgggtaatt ttgtcacata atttataaat gttactatga
     2101 tattatgtat ataaacatac cttagtgggt aatggattat tcataccttc atgttctatc
     2161 tggacacata gcgttctttt cgttacgacc ctcattctta aagcagcttt ttaccgttcc
     2221 tctgatggtt aaaacaaaag ttgtttcttc agacctaaat gggacttgta cgactacaac
     2281 gaaagaacag gttctttaca aagatacgat ggggacttca gatcatacta tgagccatat
     2341 gttgggattt tatgtgggca ccgaagcatt tcaagaggct tttagagttt tcaagcaaca
     2401 aaccagcggg cgggcgacga tgcaagaagc atttggcact gccgcgcatt tctatagggg
     2461 gattaccttg cgccaggcca ttgaatatac gcaaccgaga caagttgttc ctacacctca
     2521 aaacaacccc caactgatgc aatacattgc aggtttttgg gattttctcg cccactgcgc
     2581 tcagcagaat gttccttttg tcattaattc tacgggttat tccgttacta tcgctgcgat
     2641 caaagaagaa gctcgacggc gatttaatgg acagagcgtc attcatggac agattggcaa
     2701 tcgtttaatt ttcgctgaaa agccacatcc tgggcttgtg ctcagcgagc gtgagcttga
     2761 gacacttgtt cgtgatttct ttgataaccc cgctgatccc atctacgatg aaattatagc
     2821 tacgggtcat atcgaactgg gcttaccaac agaggcagca aaagctgaaa ttcttttgaa
     2881 agagtacgtt ccacatcatt tccccgaagt taagcctgaa gaagttatgc acattggaga
     2941 tacttttggg gattttggcg ggattttagg cgtggcgcag gctggcggga aaggagtagc
     3001 attcaattac aaccaagcgc tcgaagatcg cttgaagatc gagattgctc aaaatcctgc
     3061 aataaaagat catgtttact ttatcgaacc gaaaaatgag aaatctgatt tcgggaaaat
     3121 taaaccacta ctggagtgtt aagttgatca aaaaaagaat taccagccct gaagggagag
     3181 aacaacccct atttatttgc gaaaaacctc ttgctcaaga agagatgcat atcactattt
     3241 atggtcttga cgatcttgct agtattcggg ctgagaatta tgtaaaatat ggaagccttc
     3301 ctgttgagat tccgagctgg aatgctggaa cactccatat tcgcggtcgt gatccctgcg
     3361 ctgtggaact caaaaatctt gagcttcacg tttcctcagc actgcactcc caggcgatcc
     3421 gttctcgaaa aattccggag gttgaggatg attttccagt aactgttacg ggcattatag
     3481 aagttgaaag ctccgttctc acagggattc ggcgtgggac cgttcaaggt aataagctaa
     3541 gcgttattcc cttggggtat aacgatgcgg gtaagcatcc cattgaacaa ttttatgaag
     3601 aagctcaaga agaagcggct cttactaaag attttgttga tagccctgtc gttctcggtg
     3661 ctcaagtaga tcccgatttt accaatgggt ttaatattgt catctatgca aagagtagaa
     3721 cttcaatgtc aacggttctc catcgccatg gtggttttct tgctattcac cagcatgcac
     3781 agtgccaagc gcttttgaaa ggcaaaggaa caccaaacag tacccaagtg cgaaaaactg
     3841 gagaggaagc agtgcaatct tattcaggcg gttcgctggg tgttgatgct ggcgaccatt
     3901 tccctcttct tttccttagc tctagccaag ttgaagaggt tgttgcaaaa agatgcattg
     3961 aagaagtgat tgatgaccga ctaactggcg agaagagatc ttatccagtt atgggaatta
     4021 cgctaggtgc actcatgatt tatcgcaatt actgtgcggc aagaatttaa actgctcaaa
     4081 taagttttta agctaaagat tttaaaatgc tttgtttaaa ctcacccccc atgtccctcg
     4141 tcctctggtt caccggcctg agcggctccg gaaaaagtac cctcgccgaa gctctcaaaa
     4201 aagagctgga agctcactgg aaaacggtgg aaattctcga cggcgatgtc attcgcaata
     4261 ccctgcacca aaagctgggc ttctcgcgag aggatattcg t
//
LOCUS       DATDZU010000069         3202 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1853354, whole genome shotgun sequence.
ACCESSION   DATDZU010000069 DATDZU010000000
VERSION     DATDZU010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853354"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VJJ79_02335"
     CDS             <1..807
                     /locus_tag="VJJ79_02335"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLC22588.1"
                     /translation="QNPGYLGYLPAIELVSAVPRYVRLKEEENFEINPDRIKKLITKK
                     TRVIVLNTPANPTGTVIRRSILEEIADIAVENDLYIFSDEAYEKFMYGQKAHVSIGSF
                     NGMDKYVVTFQTFSKSYAMCGFRLGYAIGPRDVIQAMQKSIHYITICPPHISQLVGMK
                     ALSLSEKYVAQMRKEYYRRRTMIVRRLNDMGLETQMPDGAFYTFSNITRYSNNSQKFA
                     AKLLKETKVAVVPGTEFGRHGEGYIRCSYATDYRLIQYAMDRLEKFLKRK"
     gene            827..1033
                     /locus_tag="VJJ79_02340"
     CDS             827..1033
                     /locus_tag="VJJ79_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22589.1"
                     /translation="MHDKEYDGDDDFEEDLSTEEIAVAAYNKIEALIQLLIKKGIITE
                     KEYDQMEDQLFWSEEEDGTEEESI"
     gene            1208..2188
                     /locus_tag="VJJ79_02345"
     CDS             1208..2188
                     /locus_tag="VJJ79_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22590.1"
                     /translation="MRLKTIVVFCILLLIAACTSERYDPKTYSYLPVEKEEAPATEVI
                     SSLESESTAPIEGITVVRKDYFVTNPTSSKKIDVSVFQPENNSQLYPGVILVPGGTGS
                     KKDFLKPYSRETSASIAETFAAKGFTVLLFSAEGRGDSDGEEDYNGYVAQDGLYELYR
                     FLLAYENVNMDNIGIVSYSYGIALASGMLGRYQPHLQYYIEWEGPVNRWYVTFECQGA
                     SPGKPGSFSCDDEDYWLEREALRFVPYFDIEHFVIVQTEKNHGGPTVRHSVEMNTLAL
                     QYLDWVRVNGPKNYINQEYTPETLPVLSESVSYHDEILSYMTEFSLAEKG"
     gene            2222..3046
                     /locus_tag="VJJ79_02350"
     CDS             2222..3046
                     /locus_tag="VJJ79_02350"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HLC22591.1"
                     /translation="MKFVYATAPLQEATYVLIGVPDESGSNSERSGAKKGPEALRRVA
                     YERCVFKRKGRFTVAQVSSGRITKKIHDYGDVPKNKIAKVIEVLKDKVPIIIGGDHSI
                     TAEILKHMKDVTVIYFDAHPDIIASMHGYYGSVLMDAEVNLGKCIEIGVREPEIEELK
                     NIKKHRLQVITAEAFDEKGEAWVWEQIKKKIKGRVYVSVDLDVFDPAFTPGVSTPVPG
                     GLTFNQVLFLMKRIMKELHVVGFDIMELNPRYDVDDRTAHLSVKLLLEMIVNHEKK"
     gene            complement(3053..>3202)
                     /locus_tag="VJJ79_02355"
     CDS             complement(3053..>3202)
                     /locus_tag="VJJ79_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020066251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLC22592.1"
                     /translation="EIAVFVKTIPLGRAGRPQDIAEAVAFLASDAASYITGQTIIVDG
                     GLTVV"
BASE COUNT          969 a          668 c          756 g          809 t
ORIGIN      
        1 caaaatcccg gatatcttgg gtatcttcca gcgatagaac tggtgagcgc tgtcccgcgt
       61 tacgtgcgac tcaaagaaga agaaaatttc gagatcaacc ctgaccgcat aaaaaagctt
      121 ataacaaaaa aaacgcgcgt cattgttttg aacacgccgg caaacccgac tggcaccgtg
      181 atccgacgga gtatcctgga agaaattgcc gacattgctg tcgagaacga cctgtacatt
      241 ttttctgatg aagcctacga aaagtttatg tatggccaga aagcacatgt atctataggg
      301 agcttcaacg gcatggacaa gtacgttgtc acgttccaaa cgttttcaaa atcgtatgca
      361 atgtgcgggt ttcgcctggg gtatgctatt ggaccacgag atgtcatcca agctatgcaa
      421 aagtccattc attacatcac gatttgccct ccgcatattt cccaacttgt cggaatgaag
      481 gcactgtcac tctcagaaaa gtacgttgca cagatgcgca aagaatacta tcggcggcgg
      541 actatgatag ttaggcggtt gaatgacatg gggctcgaga cacaaatgcc agacggtgcg
      601 ttctacacct tctccaacat tacgcgatac agcaacaata gccagaaatt tgcggcgaag
      661 cttctcaaag aaacgaaggt tgccgtcgtt cccggaacag agtttgggag gcacggcgag
      721 gggtacattc gctgcagtta cgcaacagat tataggctaa tccaatatgc aatggacagg
      781 ctggaaaaat ttttaaagag gaagtaaaag aatggaggac ttaaccatgc acgacaaaga
      841 atatgacggc gatgacgatt ttgaggaaga cctaagcact gaagaaattg cagtggcagc
      901 atacaacaaa atagaagcat tgattcaact cctgatcaaa aaagggatca tcacagaaaa
      961 ggaatatgac caaatggaag accagctctt ctggagcgaa gaagaagatg ggactgaaga
     1021 ggaaagcatt taaatttctc caccttctat ttttatatgg gttggtatac ctcagaaaac
     1081 cagagaaagt cgcgcaaaga aaaaaagctc aagcgccgcg cgcgtgtcta taaaaaaggt
     1141 ggaagcagac gcggaaagaa atctgcgacg taagattctt taacctcttg cactctctga
     1201 agagactatg cgcctgaaaa caattgttgt tttttgcatc cttcttctca ttgctgcatg
     1261 cacttcagaa cgttatgatc caaaaacgta ttcatatctt cccgttgaaa aagaggaagc
     1321 gccggcaaca gaagtaatct cttctttaga aagcgaaagc acagctccta tcgagggtat
     1381 tactgttgta cgcaaagatt acttcgtgac caatcccacg agcagtaaaa aaattgatgt
     1441 ttccgtgttc cagcccgaga ataattcaca attgtatcct ggcgttattc ttgtccctgg
     1501 cggcacgggg tccaaaaaag atttccttaa accgtatagc agagagacta gcgcttccat
     1561 tgcagaaacg ttcgcagcaa aagggtttac ggtgttactc ttcagtgctg agggaagagg
     1621 ggacagtgac ggtgaggaag attataatgg atacgttgca caggatggcc tctatgaatt
     1681 gtaccggttc cttttggcgt acgaaaacgt aaacatggat aacatcggca ttgtttccta
     1741 ttcttatggc attgcattgg catcagggat gctcggacga tatcagccac atctccagta
     1801 ctatatcgaa tgggaaggac cagtcaatcg ctggtacgtc acctttgaat gccagggcgc
     1861 atctccagga aagcctggaa gtttctcgtg tgatgatgag gactattggc tggaacgaga
     1921 agcgttgcgc tttgttcctt attttgatat cgaacatttt gtcatcgtcc agacggaaaa
     1981 aaatcatggg ggaccaactg tacggcattc tgttgagatg aatactttag ctctccaata
     2041 ccttgactgg gtacgagtga atggtcctaa aaattatata aaccaagaat atacccctga
     2101 gacgcttcct gtcctttcag aatctgtttc gtatcacgat gaaattctta gctatatgac
     2161 agaattttct cttgcagaaa agggataaac attttaaact cgaatctctt gtaccttctc
     2221 tatgaaattt gtgtatgcca cggcaccgct gcaggaagca acgtacgttt tgataggcgt
     2281 tcctgacgag tcagggagta attcagaacg gtcaggtgca aagaaagggc ccgaggcact
     2341 ccggcgcgtt gcctatgaac gctgcgtctt taaacgaaag gggcgattca ccgttgcgca
     2401 agtcagctcc ggaaggatta caaaaaagat tcatgattac ggtgatgttc ctaagaataa
     2461 aatcgcgaaa gttatcgagg tattaaaaga caaagttccc attatcatag gcggcgatca
     2521 ttccatcact gcagaaattc tcaagcacat gaaagacgtg acagtgattt attttgatgc
     2581 gcatccagat atcattgcgt cgatgcacgg atactatggt tctgtgctta tggatgcaga
     2641 agtaaactta ggaaaatgca ttgaaattgg cgttagggaa ccggaaattg aagaactgaa
     2701 gaacattaaa aaacataggc ttcaagttat cactgcagaa gcattcgatg aaaaaggaga
     2761 ggcttgggta tgggagcaga ttaaaaaaaa gataaagggg cgagtctatg tttctgttga
     2821 tcttgacgtg ttcgaccctg catttacacc tggtgtttct acgcctgttc ctggaggcct
     2881 tacttttaat caagtgttat ttctcatgaa acgcatcatg aaagaattgc atgttgtcgg
     2941 gtttgatatc atggaattaa accccaggta cgacgtcgat gacaggactg cgcatctctc
     3001 cgtgaaactt cttcttgaga tgattgtaaa tcatgagaaa aaataatgct tcttacacga
     3061 cagtgagccc gccgtctacg ataatcgtct gccctgtgat atacgaagct gcatctgatg
     3121 cgaggaatgc gactgcttcg gctatgtctt gtggccgacc ggcacgacct aaaggaattg
     3181 ttttcacaaa aacggcaatc tc
//
LOCUS       DATDZU010000070         3357 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_308361, whole genome shotgun sequence.
ACCESSION   DATDZU010000070 DATDZU010000000
VERSION     DATDZU010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3357
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308361"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VJJ79_02360"
     CDS             complement(<1..194)
                     /locus_tag="VJJ79_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018202454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HLC22593.1"
                     /translation="MNGVWFYALGSVLIVSIISLIGIFTLGLQEKQLKAFLLYFVSFA
                     AGALFGDVFLHLLPDIVAQTG"
     gene            285..788
                     /locus_tag="VJJ79_02365"
     CDS             285..788
                     /locus_tag="VJJ79_02365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22594.1"
                     /translation="MKTALFLIGLSCTKEAKEPISSEERTKTEQREQIKVPLDLIAQH
                     MLEEIFRTHKPTETKDISDLSYFAQLDIYLTVHDQIYVLEHMYGQSPSITRNENDPEQ
                     KCIIYFFTGNNVKEKTKLWLFDSECNGSVDTPFQRTEEETQTLYRKSLEVFLQPIPKI
                     PPYQQKQ"
     gene            complement(831..2303)
                     /locus_tag="VJJ79_02370"
     CDS             complement(831..2303)
                     /locus_tag="VJJ79_02370"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013683662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HLC22595.1"
                     /translation="MVDCYLSRDGTKKISVVPKKINDYTYIVEKQEGMNVPVKIFADE
                     KLMKKMLDDQCICQGVHVATLPGIKGFSIMLSDAHQGYGFSIGGVAAIDAEKGCISPS
                     GIGFDINCGVRLLQTNLTKEEVRPKMKELLDVMFKYVPPGVGRKANVKLTEKELENVL
                     RDGAKWAVDYGYGTKEDLEHCEEYGTMPGADPAKVSKTACDRGIGQLGTLGSGNHFLE
                     VQYVAKIHDKKTAKVFGIEKEGQVVVMIHCGSRGLGHQVCSDYLRKIEETYPDIVASL
                     PEKDLAYAPAGSPIAKDYFGGMCAAANFAWANRHIIGHYVRKSFTDVFGKEAELHTVY
                     DVAHNIAKLEEHTFDGETCKVWVHRKGATRAFGRGRKEVPEKYRPYGQPILIPGSMGT
                     SSYVLVGTDHAMQESFGSTAHGAGRTMSRHEALRRWRGEDIKRELEKEGILVKATSLK
                     GISEEAPLAYKDVDEVVSVSDKAGIGALVAQLKPMGVVKG"
     gene            complement(2305..2727)
                     /locus_tag="VJJ79_02375"
     CDS             complement(2305..2727)
                     /locus_tag="VJJ79_02375"
                     /inference="COORDINATES: protein motif:HMM:NF014058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archease"
                     /protein_id="HLC22596.1"
                     /translation="MKNKFEFLPHTADVKFRAYGKTLDEAFANAALATTAVMTDDVIQ
                     SHIEKRIAVTSAKKESLLYDFLEKLLYFVDTEGFLVGEIKKLAIVQKGKRYSLHAIVR
                     GDAAEGYDVSMQIKAVTYSDMFIKEERTGVTIQVVLDI"
     gene            complement(2903..>3357)
                     /locus_tag="VJJ79_02380"
     CDS             complement(2903..>3357)
                     /locus_tag="VJJ79_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22597.1"
                     /translation="RILMQYRDKGNGNGWHAQDTVIDWNRRMIVHHPYDKDFPSYGGN
                     KNVNQGRAQKAFSFISEGFGNITLEDALKREHFARYIRNLTGLRDPAVLVEIGKFFGK
                     PARVRVPNNPEQATYTAAAWLGCNGINFYLNGNSYLNGSGATRRVRER"
BASE COUNT          939 a          851 c          599 g          968 t
ORIGIN      
        1 ccagtttgcg caacaatatc agggagaaga tgcaggaaaa cgtctccaaa caatgcacct
       61 gcagcaaagc tgacaaagta caacaaaaat gctttcaatt gtttttcttg aagcccgagt
      121 gtgaagatac caattagaga aataatgctg acaataagaa cgctaccgag cgcatagaac
      181 caaacaccat tcataaagca ctaatggaaa gtatcgtatt taaacttttc tacatctatg
      241 taaattgcga aggtatataa tagatttctg tttcacgaat aaacatgaaa acagcattgt
      301 ttcttattgg ccttagctgt accaaagaag caaaagaacc tatatcctct gaagaaagaa
      361 ctaagacgga acagagagag caaataaaag tgccgctaga ccttattgca cagcacatgc
      421 tggaagaaat ttttagaacg cataaaccca cagaaacaaa agatataagt gacctaagct
      481 actttgcaca actagatatc taccttacag ttcatgacca gatttatgtt ttagagcata
      541 tgtatggaca aagcccttca attactagaa atgaaaacga tcctgaacaa aaatgtataa
      601 tttatttctt tactggtaat aacgtcaagg aaaaaacaaa actatggttg ttcgactccg
      661 aatgcaatgg aagcgtagac actccatttc agcgtacaga agaagagacg caaaccttgt
      721 atcgaaaatc cttagaagtt tttttacagc ccattccaaa aattcctcca taccagcaaa
      781 aacagtaagg ccaattcttg cggattcact ttaggaatta aataatcatt ctatcctttc
      841 acgacgccca tgggcttgag ctgtgctact agtgccccta tgcctgcctt gtcactgaca
      901 gaaacaacct catcaacgtc tttataagca agtggtgctt cctcgctaat tcccttcaac
      961 gacgtcgcct tgacaaggat gccctccttc tctagttccc gcttaatgtc ctccccacgc
     1021 caacgacgga gtgcctcatg ccgggacatt gttcgtccag cgccgtgtgc cgtgctccca
     1081 aaactttctt gcattgcatg gtccgttccg acgagaacat acgaagacgt tcccatagaa
     1141 ccagggataa ggatcggctg tccgtacggt ctatattttt caggaacttc tttccgtcct
     1201 cgaccgaatg cccgtgtggc acctttccga tgcacccaca ctttgcatgt ctccccatca
     1261 aatgtatgct cttccaattt tgcaatgtta tgcgcaacat catataccgt atgcaattct
     1321 gcttcttttc caaagacgtc agtaaacgat ttccgcacat aatgcccgat gatgtgcctg
     1381 ttcgcccacg caaagtttgc tgcagcacac atgcctccaa aatagtcctt tgcaatgggg
     1441 cttcctgccg gcgcatacgc aagatctttt tccggcagtg atgcaacaat gtctggatag
     1501 gtctcctcaa tctttcgcaa gtaatccgaa catacctgat gaccaagacc acgcgaaccg
     1561 caatgaatca tcaccacgac ctgcccttct ttttctatgc caaaaacttt tgcagttttt
     1621 ttgtcgtgaa tttttgcgac gtattgtact tccaagaaat gatttcctga gcccagcgtt
     1681 cctaattgtc ctatgcctcg gtcacatgca gtcttgctta ctttagctgg atcagcaccg
     1741 ggcatcgttc cgtattcctc gcagtgctcg agatcttctt ttgttccgta gccataatcg
     1801 actgcccatt ttgcaccgtc tcgtagaacg ttttcaagtt ctttctccgt cagcttcaca
     1861 tttgccttcc ttccaacacc aggaggaacg tatttgaaca ttacatcaag aagctctttc
     1921 attttcggcc tgacttcttc ttttgtcaaa tttgtttgga gaaggcgtac cccacaattt
     1981 atgtcaaatc ctattcctga aggactaatg caacctttct ccgcatcaat cgcagcaacc
     2041 cctccaatac taaacccata cccttggtgg gcatcagaaa gcatgatgga aaatccttta
     2101 atccctggta acgttgcaac gtgcacacct tggcagatac attgatcgtc aagcattttt
     2161 ttcataagct tttcatccgc aaaaattttc acggggacgt tcatgccttc ctgcttctca
     2221 acaatatacg tatagtcatt aatttttttg ggaactacag aaatcttctt cgttccatcc
     2281 cggctcaggt aacagtctac catgttaaat atccagcacg acttgtatcg ttactcccgt
     2341 tctctcttct tttataaaca tatcgctgta cgtcacggct tttatctgca tcgaaacatc
     2401 atacccctca gccgcatcgc ctcgcacaat tgcatgcagc gaatacctct ttcctttctg
     2461 aacaatagct aattttttta tttccccgac aagaaaccct tccgtatcaa caaagtacaa
     2521 aagtttttca agaaaatcat agagcaacga ttcttttttc gcagacgtga cagcaattct
     2581 tttttcaata tgcgattgaa taacatcatc cgtcatcact gcagtcgtcg ctaacgctgc
     2641 gttcgcaaac gcttcgtcca gagtttttcc ataggcacga aacttcacgt ctgcagtgtg
     2701 cggcaaaaat tcaaatttat ttttcatgaa gaataaagaa caggcaacag tttaaaaaag
     2761 ttacttttgt ctggcaagat cttccggaac ttcaacatac accttgcatt gtatcgtaat
     2821 acttttccat catagagaag ctctattttt tcatcaagtg taggtctttc agaatttttt
     2881 atgccttcgg cgcgactgct cgctatcgct cgcgtacccg acgcgtggcg ccactaccgt
     2941 taagatagct gttgccattg aggtagaagt taatgccgtt gcaacccagc cacgccgctg
     3001 cagtatacgt tgcttgctcg ggattatttg gtacccggac tcgtgctggt ttcccaaaga
     3061 attttccaat ctcaacgagg acagcaggat cacgaagccc cgtaagatta cggatatacc
     3121 gtgcaaagtg ctctctcttc aacgcatcct ctaatgttat attgccaaac ccttctgaaa
     3181 taaaagagaa cgctttttgt gcccgtcctt ggttcacatt tttattccca ccatatgagg
     3241 gaaagtcttt atcataagga tgatgaacaa tcattctacg gttccagtca ataaccgtgt
     3301 cctgtgcatg ccaaccgttg ccatttcctt tatctctata ctgcatgaga atccgtc
//
LOCUS       DATDZU010000071         4520 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2295859, whole genome shotgun sequence.
ACCESSION   DATDZU010000071 DATDZU010000000
VERSION     DATDZU010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4520
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2295859"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VJJ79_02385"
     CDS             complement(<1..857)
                     /locus_tag="VJJ79_02385"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLC22598.1"
                     /translation="MLHEYLRLAWTTIRHRKLRSWLTIVGIVIGIASIISLLTLSQSL
                     QGTVEKQFESFGEKRILISAKGFQSPGTASLSLTTDDMEALETIGGIDYFVPNLFRGA
                     EVVYKDEISFTTIHGLPAEDLEKFYVDTDSGLSDGRFMRDGETNVAVVGSRVAIGMFG
                     KEVRTGNKITINHQEFKVVGILEEMGNQQDDNAIMIPLETERELFNEPERIDVIIAQV
                     HTVEDVPELQKEIEERLEESRGDTNFQVLTASQILKQIGNILGIMQIVLVGIAAISIL
                     VGTKGIMNA"
     gene            complement(847..1689)
                     /locus_tag="VJJ79_02390"
     CDS             complement(847..1689)
                     /locus_tag="VJJ79_02390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22599.1"
                     /translation="MKTNFFLVVLFFICALVPIASAQVAINSFTVEPEQVNPGETVKL
                     KIIVENVGDDDVKDILVAIDIADLPFAPLDSSTEKIIEKIHDGDAESMSFELKVLPTA
                     APQVYKIPITISYNGTTTESLVSIEVSADTEIDLMLESSELTTVNTHGKVIIKFVNKG
                     LTSVTFLKATVDESYSYDIISPAAVYIGDIKSGDIETEEFTILPTSSDPTLSLLIEYK
                     DADNNLVQERKTLDLTVYTEEEAQQLGLIPSQVSLWRVLEVAVILVLAVVIYRKMKRR
                     KNVA"
     gene            complement(1692..2363)
                     /locus_tag="VJJ79_02395"
     CDS             complement(1692..2363)
                     /locus_tag="VJJ79_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013768410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLC22600.1"
                     /translation="MVALMTVDDVHKIYPFAAGDVHAVDGISLKIEKGDFVALIGPSG
                     SGKTTAMNLLGCLDTPSTGKIFLGEHDIQHLAESDLAQVRGKKIGFIFQTFNLIPSLT
                     ALENIALPLLFQNVSRAVRMKKAREFADQLGIGDRVDHFPNQLSGGQRQRVAIARALV
                     NDPDIILADEPTGNLDTKTGAEVMSILAELNKQGKTIILVTHNLELTKIANKVIRMRD
                     GKIAR"
     gene            complement(2433..2705)
                     /locus_tag="VJJ79_02400"
     CDS             complement(2433..2705)
                     /locus_tag="VJJ79_02400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HLC22601.1"
                     /translation="MATKKRWSKQVTEKSRAIVLEQGVFTKKPKEIARYLLRSAKAST
                     KRKSTPFRSAMSMLNFYMNRAGKNLSLTAKKRLEKAKEELRKRSGK"
     gene            complement(2739..3077)
                     /locus_tag="VJJ79_02405"
     CDS             complement(2739..3077)
                     /locus_tag="VJJ79_02405"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HLC22602.1"
                     /translation="MYEQREIILIPFPYSDLTGSKQRPALILSNNRLNKTEDRMCCLI
                     TSNESVSGIPISNRAMQEGRLPFKSWVKPHRLFTIDTRIVRKRLGRVNKEFHEKIVHE
                     ILQYIESSKE"
     gene            complement(3070..3300)
                     /locus_tag="VJJ79_02410"
     CDS             complement(3070..3300)
                     /locus_tag="VJJ79_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012940540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22603.1"
                     /translation="MTNITLSIEEPVYKNMKKYSEVKWSEFVRKAIKRRIEELEQLEE
                     STNKESILTMLASEHVLKKEWDNKADERWNNV"
     gene            complement(3386..3457)
                     /locus_tag="VJJ79_02415"
     tRNA            complement(3386..3457)
                     /locus_tag="VJJ79_02415"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3423..3425),aa:Cys,seq:gca)
     gene            complement(3515..3601)
                     /locus_tag="VJJ79_02420"
     tRNA            complement(join(3515..3550,3563..3601))
                     /locus_tag="VJJ79_02420"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3564..3566),aa:Arg,seq:tct)
     gene            3766..>4520
                     /locus_tag="VJJ79_02425"
     CDS             3766..>4520
                     /locus_tag="VJJ79_02425"
                     /inference="COORDINATES: protein motif:HMM:NF013125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HLC22604.1"
                     /translation="MRAILWSLVLLLVGTPFVSANIYVTEIMHSPSISDNDGEWIEIY
                     NDGIDPVNLNNWTVNGNAFDYTTIEAGQYLVIARELIDGTDTDTESFESHWGNNNGIW
                     DESFAAVDGSFTLTNNGTITVTNGIINEEVNYNSSFGGAGGKSIERVSLTEWKDGLID
                     GTPGNGNFTATATKGNEVILDLTVSNSAPEIVLVNIMTDDSSAPGVQVMPNIGLEKNV
                     VFEVFVNDSNGYRDVSSVVAFVNNQSFNLSFAR"
BASE COUNT         1143 a         1045 c          933 g         1399 t
ORIGIN      
        1 atcgcattca ttattccttt cgtcccgaca aggatagaga tcgctgcaat cccgacaagc
       61 acaatctgca tgatcccaag aatgtttcca atctgtttca aaatctgcga tgctgtcagg
      121 acttgaaaat ttgtatcgcc ccggctttcc tccaatctct cctctatttc tttttgtaat
      181 tctgggacat cttctaccgt gtgcacttgc gcaatgatca catcaatccg ttctggttcg
      241 ttgaaaagtt cccgttctgt ttccaatggg atcataatag cgttatcatc ttgctggttt
      301 cccatttctt ctaggatgcc tacaaccttg aattcctggt gattgatggt aatcttgttt
      361 cccgtgcgca cttccttgcc aaacatccca atcgccaccc gcgagccaac gactgcaacg
      421 tttgtttctc catcccgcat aaacctccca tctgaaagtc cggaatctgt gtccacataa
      481 aatttctcaa gatcttctgc aggcagacca tggatcgttg taaaacttat ctcgtccttg
      541 tagacgactt ctgcaccacg aaaaaggttt ggaacgaaat aatctatacc accgatagtt
      601 tctagtgcct ccatatcgtc agtggtcaaa ctgagtgacg ctgttcctgg actctgaaat
      661 ccttttgcag aaataagaat ccttttttca ccgaaggatt caaactgttt ttctacggtt
      721 ccttgcaaac tctgcgagag cgtgaggaga gaaatgattg acgcaatgcc gatgacaatg
      781 cccactatcg ttaaccatga acgaagcttt cgatgcctaa tggttgtcca cgcgagcctc
      841 aggtattcat gcaacatttt ttcttcgctt catttttctg tagatgacta ctgcgagaac
      901 aagtatcact gcaacctcaa gtactcgcca caggcttacc tgcgatggaa ttagtccaag
      961 ttgctgcgct tcctcttccg tatacactgt caggtcgagc gtttttctct cttgtacgag
     1021 gttgttgtcc gcgtccttgt actcaatgag gagagaaagc gtcgggtcgc tgctcgtcgg
     1081 gaggattgta aactcttccg tttcaatatc cccgcttttt atgtcgccga tatacactgc
     1141 tgcgggagag atgatgtcat atgaataact ttcatcgaca gttgccttga gaaatgtcac
     1201 ggacgtgagc cccttgttga caaacttaat gattactttt ccatgtgtgt ttaccgtcgt
     1261 gagctcggaa ctttccaaca tgagatcaat ttccgtgtct gcgctgacct caatgctcac
     1321 caatgattct gttgtggttc cgttataact tatggttatt gggattttgt atacttgcgg
     1381 cgctgcagtc ggaagcactt tcaattcaaa ggacatgctt tctgcgtcgc catcgtgaat
     1441 cttttctata atcttttccg ttgaagaatc gagcggagca aagggaaggt ccgcaatatc
     1501 aatcgccaca agaatatctt tcacgtcatc atcccctaca ttttccacta tgattttcag
     1561 tttgaccgtt tctcctggat ttacctgttc cggttcgacg gtgaatgaat ttattgcaac
     1621 ctgtgcactc gctattggca caagagcaca gatgaaaaat aacaccacta aaaaaaagtt
     1681 tgtcttcatt tttaccttgc gatctttccg tcccgcatcc gtatcacttt gtttgcaatc
     1741 tttgttaatt caagattgtg ggtgacaaga attattgttt ttccttgctt gttgagctcc
     1801 gcaagaatac tcatgacttc agcgcctgtt tttgtatcaa gattccccgt cggctcgtct
     1861 gcaagaatga tgtccggatc attgaccaat gcacgtgcaa ttgcgacacg ctgccgctgt
     1921 ccgcctgaaa gctgattcgg aaaatggtcg actctgtccc ctatgccaag ctggtcggca
     1981 aattctcttg ccttcttcat acggactgca cgagaaacgt tctggaacag aagcggaagc
     2041 gctatattct ctaatgctgt caaactgggg atcaagttga atgtttgaaa aataaacccg
     2101 attttctttc cgcgcacttg tgcaaggtca ctttccgcaa gatgctgtat atcatgctct
     2161 cccaagaaaa tctttcctgt gcttggcgta tcgagacagc ccaagagatt cattgccgtg
     2221 gtctttccag agccgctcgg acctattaac gcaacaaaat ctcccttttc aatcttcaat
     2281 gaaataccgt cgactgcgtg aacatcgcca gcagcaaacg gataaatctt atgcacatcg
     2341 tccaccgtca tcaatgcaac catttattgg cagaatttta ttgctattta taaatcattt
     2401 ggacttctct tctgaagata ttctccgctt gattattttc cagaacgctt ccgcaattct
     2461 tccttcgctt tctccagtcg cttttttgcg gtaagagaga gattttttcc cgcacggttc
     2521 atgtagaagt tgagcatgga cattgcagaa cggaacggcg tgctttttct tttcgtgctt
     2581 gcctttgcag aacgtaataa ataacgggca atctctttcg gcttctttgt aaatacgcct
     2641 tgctccaaaa ctatcgccct gcttttttct gtgacttgct tggaccagcg ttttttcgtt
     2701 gccatacttt tcaaaaatgg agtcttgcaa agttctcttt attctttgct gctttcaatg
     2761 tactgcagga tttcatgaac gattttctcg tgaaattctt tattcacgcg tcctagcctt
     2821 ttccttacta tacgcgtatc tattgtgaaa agcctatgtg gttttaccca actcttgaac
     2881 ggaagccgcc cttcttgcat tgctctattg gatataggaa tgccgcttac ggattcattg
     2941 gatgtaataa gacaacacat tctatcttcc gttttattca aacgattatt tgagaggatt
     3001 aatgccgggc gttgctttga acctgtaaga tcagagtatg gaaatgggat aagaataatt
     3061 tctctttgtt catacattgt tccacctctc gtctgccttg ttatcccact ctttctttaa
     3121 aacatgctct gatgcaagca tcgtgaggat actttctttg tttgtacttt cctctaattg
     3181 ttccagctcc tcaatacggc gcttgattgc tttccgaaca aactcgctcc actttacttc
     3241 cgaatacttt ttcatgttct tatagaccgg ctcttctatg gataatgtga tattggtcat
     3301 agcggcaaat aagtgacgcc acttaataaa ggttttggtc ttttttccga aagattttca
     3361 acgtgtgatt tgaagagata agaaaagcag gcagcaggat tcgaacctgc gcatgagagg
     3421 gttgcagcct cttgccttac cacttggcta tgcctgcata cttcgagaag agaaaccaga
     3481 gatttataag tgttattatt gtcaaaaaat aaagcggacc tagtgggatt tgaacccacg
     3541 acctcctgct ctcttccatt gatagaaggc aggcgctcta tccaagctga gctataggtc
     3601 cattagcctt tgctgagttt ctgaaacctt ttatatttaa ctgtttactt atttggctga
     3661 aaacttttca tattttctga aagagtttca attttttctg cgatgggttt tttaaggcaa
     3721 cttttctcga atgtcatgct tcatagcaca cagggaggtg gtaatatgag agcaattctt
     3781 tggagcctgg tgttgctcct tgtcggaaca ccattcgtta gcgcaaacat ctatgtgaca
     3841 gaaatcatgc acagtccgtc tatctcggac aatgacggcg aatggataga gatttacaat
     3901 gacgggattg atccggtgaa cttgaataat tggactgtca atggtaacgc gttcgattac
     3961 acgacgatag aagcaggaca gtaccttgtc attgcgcggg aacttataga tggaacagac
     4021 acggacacgg aaagctttga atcccattgg ggaaacaata acggaatctg ggacgaatcc
     4081 tttgctgcag tggacggaag ctttacgctc acgaacaacg gaaccattac cgttactaac
     4141 gggattatta atgaagaagt caattacaac agttctttcg gcggcgctgg aggaaaaagc
     4201 atagaacgcg tctctctgac agaatggaaa gatggactaa ttgacggcac accgggaaat
     4261 ggaaacttta ccgcaactgc cactaaagga aatgaagtaa tactggacct taccgtcagc
     4321 aacagcgcgc cagagattgt tctcgtgaac ataatgacgg atgactcttc tgcgccaggc
     4381 gtgcaagtga tgccaaacat aggtcttgag aaaaacgttg ttttcgaagt gtttgtcaat
     4441 gacagcaatg gatacagaga cgtatcgtcc gtggttgctt tcgttaacaa tcagagtttt
     4501 aacctaagct ttgcaaggaa
//
LOCUS       DATDZU010000072         6542 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1184700, whole genome shotgun sequence.
ACCESSION   DATDZU010000072 DATDZU010000000
VERSION     DATDZU010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6542
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184700"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..598)
                     /locus_tag="VJJ79_02430"
     CDS             complement(125..598)
                     /locus_tag="VJJ79_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HLC22605.1"
                     /translation="MSEYLAVIRVRGRAGVNKKVNDTLDMMRLYKQNGCVIIPKTPVY
                     LGMLHRAKDYITWGEITKETLLFLLQKRGKVAGNKPLTEEYLKTHLNVDMKTLVEELF
                     DDKKKFKDVPGVKPFFRLTPPVKGFERGGIKTPFSMGGTLGYRKDKINILLQRMT"
     gene            complement(591..1352)
                     /locus_tag="VJJ79_02435"
     CDS             complement(591..1352)
                     /locus_tag="VJJ79_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HLC22606.1"
                     /translation="MVKKDIRRGKMEGAESGIAREKSFDREAWQPRTELGKKIKRGEI
                     VSIDEIIDKGLPLLEPGIVDALLPGLQSDLLEVGQSKGKFGGGKRSIWRQTQKKSMEG
                     NKPSFATVAVCGDGNGYVGIGSGKAKETVPAREKATRRAKLNIIKVKRGCGSWECNCR
                     TPHSIPFTVKGKCGSVTMILRPAPRGTKLCVEKECQKILAMAGIKDVYAKARGQTRTK
                     LNLVYACFAALKQLTAMKVQQTHVEKLGIAGGKHE"
     gene            complement(1353..1850)
                     /locus_tag="VJJ79_02440"
     CDS             complement(1353..1850)
                     /locus_tag="VJJ79_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015283610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HLC22607.1"
                     /translation="MKRKKFIPYRRKREGKTDYKKRLRLLKSGALRLVVRKSLRNITV
                     QIIQYDKNGDKTLLSSTSAELQEYGWKGYGRNLPAGYLVGLLCGMKAKQKKIDYVIFD
                     QGLYPARKGTVIYGVLKGFTDAGVNVPHDSSIFPEEERLMGKHISDEITKQFDAVKTK
                     IQQVK"
     gene            complement(1847..2302)
                     /locus_tag="VJJ79_02445"
     CDS             complement(1847..2302)
                     /locus_tag="VJJ79_02445"
                     /inference="COORDINATES: protein motif:HMM:NF013448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19e"
                     /protein_id="HLC22608.1"
                     /translation="MKLNNQRSLSAKVLKIGKKRVWFDRNKTDEIQEAITRADIRTLA
                     RRNIIQSRPQLGSSRVRARKRLAQKKKGRQQGEGSRKGSPGARLRKKHAWMSLVRSQR
                     GFVKELKEKTLIDVPTYRNLYRKIKGGYFRNKRHIKLYLSEQKLFHTKK"
     gene            complement(2299..2877)
                     /locus_tag="VJJ79_02450"
     CDS             complement(2299..2877)
                     /locus_tag="VJJ79_02450"
                     /inference="COORDINATES: protein motif:HMM:NF006332.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32e"
                     /protein_id="HLC22609.1"
                     /translation="MVDARLLALRNRNKARKPMFLRQDAHKRKKLSHNWRQPKGMDSK
                     LRLQFRSRRSLPSPGYSSPRKVRGLNRQGFQDMLIRNINDLATIDPKTHAVLVAHVGM
                     KKKIAILTVCQERKLHVANVRDVSAFLKKVDEENKAKQNKKKERETQNKKTEETKKKK
                     EEKKEEKSDATPDEETKKGQKSDKIKVLEKRE"
     gene            complement(2879..3424)
                     /gene="rpl6p"
                     /locus_tag="VJJ79_02455"
     CDS             complement(2879..3424)
                     /gene="rpl6p"
                     /locus_tag="VJJ79_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014734781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HLC22610.1"
                     /translation="MIDAKRLRKEIEIPQGVEIQIGDMLVVKSGKYEVKKKLFTPAVT
                     ISKKENRIILEPKKFSKREKKMINTFRAHLRNMICGVQNPYCYKLKICSSHFPMSVTM
                     EGKELVVKNFLGEKIPRRADILEGVDVKVEGDTITITSASKEAAGQTAANFEQSTRIT
                     NRDRRVFQDGLWITEKGGKKL"
     gene            complement(3426..3818)
                     /locus_tag="VJJ79_02460"
     CDS             complement(3426..3818)
                     /locus_tag="VJJ79_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011977049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HLC22611.1"
                     /translation="MATNDTLAIALSTMLNAQETGKNTCVVKPVSKITLAVLHIMKEQ
                     GYIGDYTILEDGKGGNIQVNLTGAINKCGVIKPRFSVTKQEFDKFEKRFLPAKDFGLM
                     IITTPQGIMTQTEAREKGVGGKLLAYVY"
     gene            complement(3820..4050)
                     /locus_tag="VJJ79_02465"
     CDS             complement(3820..4050)
                     /locus_tag="VJJ79_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HLC22612.1"
                     /translation="MTASSHKKVFKQLKNKPVKLKKYLKHNAPKQRKFGVSAKPCRIC
                     GRFGAHIQTYDLHICRQCFRENATTLGFKKYH"
     gene            complement(4050..4565)
                     /locus_tag="VJJ79_02470"
     CDS             complement(4050..4565)
                     /locus_tag="VJJ79_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HLC22613.1"
                     /translation="MKQIGIEKVTLNIGTGKPGAELEKAKVLLQRISGMKPAETRTKK
                     RIPTWGLRPNLVIGCKVTVRGEKALQLLGILLQAKDSKLTAYSFDMFGNFSFGIKEYL
                     EIPTLDYIPEVGIMGLEVAVTLKRKGFRVKHRALKSKRIPFRHAIRKEEAMAFAREKF
                     QLAIIESEEAE"
     gene            complement(4571..5257)
                     /locus_tag="VJJ79_02475"
     CDS             complement(4571..5257)
                     /locus_tag="VJJ79_02475"
                     /inference="COORDINATES: protein motif:HMM:NF003312.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4e"
                     /protein_id="HLC22614.1"
                     /translation="MVKRHLSRLYAPKSWPIKRKETKFITRSRTGAHSLKESVPLSLV
                     LTHLLKHAQTRKEVKKILTEGKILVNNKIRKDLALSVGPMDMVSIPSLNEAYRVLYTP
                     KGEIFMLPITEKEKDMLLLKVENKTIVKGGKVQLNQSNGATMLVEKDTYKTGDTLVRS
                     LIDGKIIEHLAFKKGARLYITGGKNIGRIGVLENVEKNMIVVKSDNATFKTAKEYAFV
                     VGNYITLKEQ"
     gene            complement(5259..5657)
                     /gene="rplX"
                     /locus_tag="VJJ79_02480"
     CDS             complement(5259..5657)
                     /gene="rplX"
                     /locus_tag="VJJ79_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HLC22615.1"
                     /translation="MKTEWSKHWKSSIRPSKQRKYRYNAPLHIQQKFMDVHLSPELRK
                     KYGIRHVMIRKGDKVKIVRGQYKKKTGKILKVLILRQKVHMEGIEQTRKDGTKSFVAL
                     QPTNLMILELDLTDKIRKEKLEKKTSKEKK"
     gene            complement(5661..6062)
                     /locus_tag="VJJ79_02485"
     CDS             complement(5661..6062)
                     /locus_tag="VJJ79_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HLC22616.1"
                     /translation="MKALSSYGVRGIPIGARVPTCDNSGAKVVQVVSVKGHKTVRKRL
                     AAAGVGDLIKASVIKGEPEIRKQLVDAVVVRQKKEYRRPDGTRIKFEDNAVVVLKDDK
                     GNPKGTIFKGAIAKEVAERWPGIAKVAAIVV"
     gene            complement(6059..6388)
                     /locus_tag="VJJ79_02490"
     CDS             complement(6059..6388)
                     /locus_tag="VJJ79_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012940737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HLC22617.1"
                     /translation="MKTKKSVGMGIQAPQRTCTDVHCPFHGDLRLHGRTFVGRVTKKN
                     LQKTVSVEWPRTSYVEKFERYVNRRSRVKAHNPPCVDANIGDKVTIVETRPISKTKTF
                     VVVGVEK"
BASE COUNT         1388 a         1517 c         1264 g         2373 t
ORIGIN      
        1 gagccggcca taccttttcc accgcgggag ccttttcctc tgtgcttttt cttgtggccc
       61 cagccgtggc tccattttcc tcgctgtttc ctactttttc tttttcgcgt cgtacgtttc
      121 atggttaggt catcctctga agtagaatgt tgattttatc tttcctgtac cccaatgttc
      181 cgcccatact gaacggtgtc ttgatcccgc ctcgctcaaa ccctttaacc ggcggcgtca
      241 agcggaagaa cggtttcaca ccaggaacat ccttgaattt tttcttgtcg tcgaacaatt
      301 cttcgactaa tgttttcata tcgacgttca agtgcgtttt aaggtattcc tcagtaagtg
      361 gtttgttccc tgcaaccttt cctcgtttct ggagcaagaa gagaagagtt tctttagtaa
      421 tttcccccca agtaatataa tcttttgcac ggtggagcat ccccaggtac acaggagtct
      481 tcggaataat cacgcaccca ttttgtttgt acaggcgcat catgtcgagc gtgtcattaa
      541 cttttttgtt cacgccagct cttccacgta cccgaatgac tgcaagatac tcactcatgt
      601 ttgcctccag cgataccaag tttttcaaca tgcgtttgtt ggactttcat tgcagtaagt
      661 tgttttagtg cagcaaagca tgcatagaca aggtttagct ttgtccgtgt ttgtcctcgt
      721 gcttttgcat acacgtcttt gattccagcc atagcaagga ttttctgaca ttctttctca
      781 acacagagtt ttgtccctcg tggtgctggc cttaatatca tcgtgacaga accacatttt
      841 cctttgacag tgaatggaat cgaatgaggg gttctacagt tgcattccca tgacccgcag
      901 cctcgtttga ctttgataat gtttaatttc gcgcgccgcg ttgctttttc ccgtgcaggc
      961 acagtttctt ttgcttttcc agatccaatg ccaacgtatc catttccgtc tccgcagaca
     1021 gcaacagttg caaaggacgg tttgtttcct tccatggact tcttttgggt ttgtctccag
     1081 atgcttcgtt ttccgccgcc gaactttccc ttggactgtc caacttcaag taaatctgat
     1141 tgaagaccag gcaatagtgc atcaacaatc ccaggttcca gaagaggaag acctttatcg
     1201 ataatttcgt caatgctgac gatttccccc ctcttaattt ttttacccag ttctgttcgc
     1261 ggttgccatg cttctctatc aaaacttttt tctcgtgcga taccgctttc agcgccttcc
     1321 attttcccgc gtcgaatatc tttcttcacc atttatttca cctgttgaat tttagttttg
     1381 acagcatcaa actgttttgt tatttcatct gagatatgtt ttcccatgag ccgttcttct
     1441 tctggaaaga tagatgaatc atgtggaaca ttcacgccgg catctgtaaa tccctttaaa
     1501 acaccataga ttacagtgcc ttttcgtgct gggtacagcc cttggtcaaa gatgacatag
     1561 tcaatctttt tctgttttgc tttcatcccg cagagcagac caacaaggta tcctgcaggg
     1621 aggtttcttc catacccctt ccatccatac tcttgaagct ctgcactcgt gctgctaagg
     1681 agcgttttgt caccattttt gtcgtattga atgatttgta cagtaatatt tctgagcgac
     1741 tttctcacga caaggcgtag tgctccagat ttgagtaagc ggagtcgttt cttgtaatcc
     1801 gtctttcctt cgcgttttct tcggtacggg ataaattttt ttcgtttcat ttttttgtgt
     1861 ggaacagttt ttgttcgctg aggtacaatt taatgtgtcg cttgtttctg aagtaccctc
     1921 ctttaatctt tcggtacaaa tttctatatg taggaacatc aatcaacgtt ttttctttaa
     1981 gttctttcac gaaccctcgc tggctgcgaa caagagacat ccatgcatgt tttttgcgta
     2041 accgtgctcc tgggcttcct tttcgtgacc cttctccttg ttgccttcct ttcttttttt
     2101 gtgcgagtct tttccgcgca cggacacgag agctacctag ttgcgggcga ctttggataa
     2161 tatttcgtcg cgcaagagta cgaatatctg cccgggtaat tgcttcctga atttcatcag
     2221 tcttgtttct gtcaaaccaa acccttttct tcccaatttt caatactttc gcgctgagtg
     2281 atcgttgatt attcagtttc attctcgttt ctccaggact tttattttat cacttttttg
     2341 ccctttcttt gtttcttcat caggagtagc gtctgacttt tcttctttct tttcctcttt
     2401 ttttttcttt gtttcttcag tttttttatt ttgcgtttct cgctctttct ttttgttttg
     2461 ttttgcttta ttttcttcgt ctactttttt gaggaatgca ctaacatcac gaacatttgc
     2521 cacgtgtagt tttctttcct ggcacacggt aaggatagca atctttttct tcatgcccac
     2581 gtgcgcgacg agaaccgcat gcgttttagg gtcaattgtt gccagatcat tgatatttct
     2641 gataagcata tcttgaaatc cttgcctgtt gagaccacga acttttcgcg gtgaagagta
     2701 ccctggtgaa ggaagacttc gcctgctacg gaactgaagc cggagctttg agtccatgcc
     2761 ttttggttgt ctccaattat gtgaaagttt ttttcgtttg tgagcatcct gtcttaagaa
     2821 cattggcttt ctagctttgt tcctatttct aagtgcaagc aagcgtgcgt caaccatatt
     2881 acagtttctt gcctcctttt tcagtaatcc aaagaccgtc ttggaacacg cgccggtccc
     2941 tgtttgtgat tcgtgtgctt tgttcaaaat ttgcagcagt ttgtcccgca gcttctttgc
     3001 ttgcagaggt aatcgtgata gtgtcgcctt ctactttgac gtcgacgcct tccaaaatat
     3061 cggcacgtct aggaattttt tcgccaagga aatttttgac tacaagctct ttcccttcca
     3121 tggtaacaga catagggaag tggctggaac agatttttaa tttatagcag tatggatttt
     3181 ggacgccaca gatcatatta cgaagatgcg cacggaatgt gttaatcatt ttcttttctc
     3241 ttttggaaaa ctttttaggc tcgagtatga tcctgttttc ttttttgctg atagtaactg
     3301 ccggagtaaa gagcttcttt ttcacttcat attttccgct tttcacgacg agcatgtcac
     3361 ctatttgaat ctccacccct tgagggattt caatttcttt cctgagtcgt tttgcatcta
     3421 tcatgttagt atacgtaggc gaggagcttt cccccgacgc ctttttctcg tgcctcggtt
     3481 tgtgtcataa tcccttgagg ggtagtaata atcatgagtc caaaatcttt tgcgggtaag
     3541 aatcgttttt cgaacttgtc aaattcttgt ttggttacgg agaacctcgg cttgatgacg
     3601 ccacatttat tgattgcgcc agtaaggttt acttggatgt ttccgccttt tccatcttct
     3661 agtatagtat aatctccaat gtagccctgt tctttcatga tatgtaagac ggcaagcgta
     3721 atttttgaga caggtttcac tacgcaagta ttctttcctg tttcttgagc gttgagcatc
     3781 gtactcaatg caattgcgag tgtgtcgttt gttgccatgt tagtggtact tcttgaatcc
     3841 aagtgttgtt gcattttctc ggaaacattg cctgcagatg tgcaaatcgt atgtctgaat
     3901 atgtgcgcca aatcgtccgc aaattctaca tggttttgca cttacaccaa atttcctttg
     3961 tttcggggca ttatgtttga gatatttttt gagtttcaca ggcttgtttt tcaactgttt
     4021 aaatactttc ttgtgactgc ttgctgtcat tactctgcct cctcactttc gatgattgct
     4081 agctgaaatt tttctcgtgc aaaagccatt gcttcttctt tgcgaattgc atgtctgaaa
     4141 ggaatccgtt ttgatttgag tgcacggtgc tttactctaa acccttttct tttcagcgtt
     4201 actgcaactt caaggcccat aatgccaact tcaggaatat aatctaaggt aggaatctcg
     4261 aggtattcct tgataccaaa tgaaaagttt ccaaacatgt caaaagaata tgcggtaagc
     4321 ttgctatctt ttgcttgaag gagtatccct aagagctgta gcgctttttc tcctcggaca
     4381 gttactttgc agccaattac aagatttggt cgaagacccc atgttgggat tcgttttttt
     4441 gttcttgttt ccgcaggctt catgccagag atccgctgga ggagaacctt tgctttttca
     4501 agttcagctc caggctttcc agtaccaatg tttagcgtca ctttttcaat tccgatttgt
     4561 ttcatgggac tcattgttct ttcagcgtaa tgtagtttcc tacaacgaac gcgtattctt
     4621 ttgcagtttt gaatgttgca ttgtcggact ttacaacaat catatttttt tcaacgtttt
     4681 ctaggacacc aatgcgtcca atgttttttc caccagtaat atagagccgc gcacctttct
     4741 taaaggcaag atgttcgata atttttccat caataaggga gcgtactagt gtatcgccag
     4801 ttttgtacgt gtctttttct actaacatgg tcgcgccatt gctttggtta agttgtactt
     4861 tccctccttt gacaatagtt ttattttcaa ccttcagcaa gagcatatct ttttctttct
     4921 ccgtgattgg cagcatgaaa atttctcctt tgggggtata taaaacacgg tacgcttcgt
     4981 tcaacgaagg aatactgacc atgtccatgg gtccaacgga caatgcaaga tcttttctta
     5041 tcttattatt aacaaggatt tttccttcag taaggatttt tttaacttct tttcttgtct
     5101 gcgcatgttt caataaatgc gtgagtacca aagagagggg aacagattcc tttaaggaat
     5161 gtgcacctgt ccgtgaccgt gtgataaact ttgtttcctt tctcttaatc ggccaagatt
     5221 ttggtgcata caatcgtgat aaatgtcttt taaccatgtt attttttctc cttgctcgtt
     5281 ttcttttcca gtttttcctt tcgtatttta tccgtaagat caagctctag gatcataagg
     5341 ttcgtcggct gcaacgcaac aaacgatttt gttccatcct ttcgcgtttg ttcaatccct
     5401 tccatatgta ctttttgtcg taggataagg actttcagta tttttcctgt ctttttcttg
     5461 tactgcccac gaacaatctt tactttgtcg ccctttcgta tcataacatg tcgaatgccg
     5521 tacttcttcc taagttctgg actcaagtga acatccatga atttttgttg gatatggagc
     5581 ggagcattgt acctatattt tctctgctta ctaggacgaa tgctcgattt ccagtgtttt
     5641 gaccattctg ttttcatgtt ttacaccacg attgcggcaa cttttgcaat gcccggccac
     5701 cgctccgcaa cttcttttgc aattgctccc ttgaagatag ttcccttcgg gtttccttta
     5761 tcatccttaa ggacaacaac cgcattgtct tcgaacttaa tgcgcgtgcc atcgggccgt
     5821 ctgtattctt ttttctgtct cacaacaaca gcatcaacaa gttgttttct aatttccggc
     5881 tctcccttga tgacagacgc tttgatcagg tcgccaacgc cagcagcggc gagtcgtttt
     5941 ctaactgtct tatgcccttt aacgctgaca acttggacaa cttttgcacc agagttatca
     6001 cacgttggaa cacgtgcacc aatgggaatt cctcggacac cataggatga taatgctttc
     6061 atttttcaac tccaacaaca acaaatgttt ttgttttact gatggggcgt gtttctacga
     6121 tagtgacttt gtcgccgata tttgcatcaa cacatggtgg attgtgtgct ttcacgcgcg
     6181 atcgtctgtt cacgtaccgc tcgaattttt ctacgtaact tgttctgggc cattcgacac
     6241 tgacagtttt ttgtaggttt ttcttggtaa cgcgcccgac aaacgtcctg ccgtggagtc
     6301 ttaggtctcc atgaaagggg caatggacat cagtacatgt ccgttgtggc gcctgtattc
     6361 ccatgcctac gctttttttc gttttcattt tttgatcctg tcttccggcc ttccgaccag
     6421 attttctcca ttgataatga tttcttctcc atcaatcctg agcttcagtt cgacatttcc
     6481 cttcaggaca attttctcgc ctttcgccgt ctcgattatc aacgtatttt tggtttcgtc
     6541 aa
//
LOCUS       DATDZU010000073         4408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2307808, whole genome shotgun sequence.
ACCESSION   DATDZU010000073 DATDZU010000000
VERSION     DATDZU010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4408
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2307808"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1169
                     /locus_tag="VJJ79_02495"
     CDS             <1..1169
                     /locus_tag="VJJ79_02495"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HLC22618.1"
                     /translation="LATCVGIMLGIITGLVPGIHVNLVSTFILSISGMLLAHTSPFLL
                     CVAILAMAVTHTFLDTLPSIFLGVPQEETVLSMLPGHRLLLQGKGTEAVLLSVFGSLG
                     SMILAIPLVPILVYVLRYFYSIFEPFIGWILVAVCLFMIFREKEKIDAVVLFCLSGAL
                     GIAVLRLPLTQSLLPLLSGLFGVSMLCMSLRNNVWIPKQERSELSLEDVKKALPCAVI
                     FGGLASFLPGLGPAQAATISSSFVKLTERGFLILTGGLATVNMVLSLVMFYVLDKARN
                     GAVVAMSEMMHLSFFDFLIFLNVALIAGGVATILAIFFSGIFSSLISFVPYTKMCFFV
                     LCFVIGLVFLLTSWMGILILFVSAAVGLVAHTSAVAKSHMMGCLLVPVILYFLF"
     gene            1498..1941
                     /locus_tag="VJJ79_02500"
     CDS             1498..1941
                     /locus_tag="VJJ79_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22619.1"
                     /translation="MPVEEAIALIILPAIAMGILIGIYELTLIHRDENYTGSKWFAHG
                     LHTFIPLILGLLISFNVPFFLQQFGASLPLWLQNELYIRLAIALVIAIKVRAVSAVVP
                     GAAGRGMREGWIHTFVVGILVAVAPYAWPFIEPFAPTWLGGSAGQ"
     gene            2029..2610
                     /locus_tag="VJJ79_02505"
     CDS             2029..2610
                     /locus_tag="VJJ79_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22620.1"
                     /translation="MQGKQELERFLTETIHHSCERRKLSISLPTREYVVTLLEGIIKT
                     DSLVTEFEWNREHMRGFEPITFKMQRAAADPKELKSVGDHCLIFVGFFYGFVQKQGDG
                     QAKYYCETGQTAYAQYGAYQLHRNLQTQGFLFREMAKKFIDVGKIIGDIELENMDEKK
                     LYRLLALYEATKDERYAEMLRTSGIFLEKVGLS"
     gene            2762..3070
                     /locus_tag="VJJ79_02510"
     CDS             2762..3070
                     /locus_tag="VJJ79_02510"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HLC22621.1"
                     /translation="MKSSGLISLKGLLAFQILHLLHKKECCGDDLANLIGNKKGSKLT
                     PGTIYPALKFLRRKKLIAYRKNGRKKLYSLTKAGKKEYRNVHTTFVSIFKPLLKISKK
                     "
     gene            complement(3071..3418)
                     /locus_tag="VJJ79_02515"
     CDS             complement(3071..3418)
                     /locus_tag="VJJ79_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22622.1"
                     /translation="MVESIRERLQRLQNTPSRPIEPLVRDPGAQEVRKILSPESVFMK
                     KVEKVMTQYAEIKRKMLSDSGQYLSLYYELHKAEETFVTLVEDPEVKYLDLPEVFLQK
                     VDALKQNILAKMK"
     gene            complement(3468..4313)
                     /locus_tag="VJJ79_02520"
     CDS             complement(3468..4313)
                     /locus_tag="VJJ79_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HLC22623.1"
                     /translation="MEKDELLLFEDFLNAFSKKNGKGLGEKTKQGILILAKFIETTSP
                     GQALESLQKLHNPYLKERNYPLATYALWIYLKSKGYEDKQIKELATFKKRNLSAITDE
                     EKLAASVLSKKEILYLGDNIKNQRDNLIVRLLYDTGARVSELANARIKDIDIDTGEMQ
                     VMGKGRKPRTVYFQKATIEKLKTYLGENEITNPNSLIFAIKPITIWYNLKKYGQELLD
                     RDLHPHMFRHSRLQHMADEGVDSFAIKSYAGHSDIGTTQIYIKNSKFQRKLAFTKAGD
                     IWKEK"
BASE COUNT         1125 a          898 c          876 g         1509 t
ORIGIN      
        1 tgcttgctac atgtgtggga attatgctag gcattatcac aggccttgtc ccgggcattc
       61 atgttaacct cgtatctacg ttcattctta gcatctcggg aatgcttctt gcccatacgt
      121 ctcctttcct cctttgtgtt gctattcttg caatggctgt cacgcataca ttccttgata
      181 cgcttccttc gatctttctc ggtgtgcccc aagaagagac agtactttcc atgctccctg
      241 ggcaccgcct tctgcttcaa ggaaaaggaa cggaggctgt tctcctgagt gtgtttggtt
      301 ctctcggcag catgattctt gcaattccac ttgttcccat acttgtctat gtcttgcgtt
      361 atttttattc tattttcgag ccgttcattg gatggattct tgttgccgtt tgccttttta
      421 tgatatttag agaaaaagaa aaaatagatg ctgttgttct cttctgcctt tcaggtgcgc
      481 ttggcattgc tgttcttcgc ctgcccttga cacaatctct tcttccactc ctttctggat
      541 tatttggcgt gagcatgctc tgcatgtctc ttcgcaataa tgtttggatt ccaaaacaag
      601 aacgaagtga actttctctt gaagatgtga aaaaagcgtt gccgtgtgcg gttatttttg
      661 gtggactggc aagttttctt ccaggtctgg gacctgcaca agctgctaca attagttctt
      721 cctttgtcaa acttaccgag cgagggttcc ttatcctcac aggaggactt gcgaccgtga
      781 acatggttct ttctcttgtc atgttttatg ttcttgacaa ggcacggaac ggtgcagttg
      841 tagccatgtc agaaatgatg catctctcat tttttgattt tttgatattt ctcaatgttg
      901 cgctcattgc tggcggagta gcaacaatcc tagctatatt tttttccggg atattttcat
      961 cgctcatctc tttcgttccg tatacgaaga tgtgcttttt tgttctttgt tttgtaatag
     1021 gtcttgtctt cctcctcaca agctggatgg ggattctcat acttttcgtc agcgctgctg
     1081 ttggtcttgt tgcacacacg tctgccgttg caaaaagtca catgatggga tgcttgcttg
     1141 tcccggttat cctttatttt ttattttaga atgagaaatg aaaaataaag aaaggcgatt
     1201 tattctccat cgccatcatc atcgtcttcg tcatcatcga agtcgtcatc tatatcgtcg
     1261 tcttcaagat tttcttcatc gtctatacgc aacacgtcat caaatggttt ttccatcgta
     1321 tatacctcca ttgtttttga aacgcaagga taacaggaga tatataaata ttcctgttct
     1381 cctttttgct acgtgaggca ctgtagttta tatatttttt cttgtgtatg agaaattgtt
     1441 gcacactagc cgaaccacag agtaaacctt ataaagttct ttgctctcaa catcactatg
     1501 ccagttgaag aagcgatcgc attgattatt ctcccagcaa ttgcaatggg aatcttgatt
     1561 gggatctatg aattgactct aattcaccgt gacgagaatt atacaggaag caaatggttt
     1621 gcgcacggtc tgcatacgtt tatccccctt atccttggtc tgctcatttc ttttaatgtt
     1681 ccatttttct tgcaacaatt tggcgcatca ttacctctat ggttacaaaa tgaattgtat
     1741 attcgcctcg ccattgcact ggttattgcg attaaagttc gcgctgtctc tgcagttgtt
     1801 cctggtgccg ctgggcgcgg tatgcgagaa ggatggatcc atactttcgt tgtagggatc
     1861 cttgttgccg tcgctcccta tgcatggccg tttatagaac catttgcgcc gacgtggctt
     1921 ggcggtagtg ctgggcaata ggcgtatgat tcttcaaggg aactggattg ctctccaata
     1981 aggaaaaaga aacatttatt agtcccgaag acctctatac ttttacgtat gcaagggaag
     2041 caagagctcg aacgtttcct tacagaaact attcaccatt cttgcgaacg gcgcaaatta
     2101 tctatttctt tgccgacacg ggaatatgtt gtgacactcc ttgaagggat tatcaaaaca
     2161 gattcgctgg taacagaatt tgaatggaat agggagcata tgcgaggatt tgagcctatt
     2221 acatttaaaa tgcaacgagc agcagcagat cctaaagaat tgaaatctgt cggagatcac
     2281 tgccttattt ttgtcggctt tttttatggc ttcgtccaaa aacagggcga tggacaggct
     2341 aaatattatt gtgagactgg tcaaactgcc tatgcccagt atggtgccta ccaattacac
     2401 cgaaatttgc aaacgcaagg gtttctcttt agagaaatgg caaagaaatt tattgatgtg
     2461 ggaaagatta ttggggatat tgaacttgaa aacatggatg aaaaaaagct gtaccgcctt
     2521 ctggcattgt atgaagcgac taaagacgaa aggtatgcag aaatgctccg tacaagcgga
     2581 atttttttag aaaaagtggg gcttagttga tttaattttt gcttaaaact tttaagtggc
     2641 agatttttat gtgttttgct aatattggtt aacagatata ttgtacttac aattaattgt
     2701 ttatcctata tattgcttgt acaacacaaa gtttaaaaat agcggaaaca attaagtttg
     2761 tatgaaatct tccggtttaa tctccctcaa agggctcctg gccttccaga tcctccacct
     2821 actccataaa aaagagtgct gtggcgacga tttagcaaac cttattggca acaaaaaggg
     2881 cagcaaactt accccaggga ctatttatcc tgcgctgaaa tttctcagac gaaaaaaact
     2941 tatcgcgtat agaaaaaatg gccggaaaaa actctactcg cttacgaaag caggaaaaaa
     3001 agaataccgt aatgttcata caacttttgt cagcatcttc aaaccactgc ttaaaatatc
     3061 taagaaatga ttacttcatt ttagcgagga tattttgctt taatgcatcg actttttgca
     3121 agaagacttc tggaagatct aaatatttta cttctggatc ctctactaat gtgacaaacg
     3181 tttcttccgc cttgtggagc tcgtaatata aacttaaata ctgaccagaa tccgagagca
     3241 ttttcctctt gatctctgcg tactgagtca taaccttttc tacttttttc atgaacacag
     3301 actctggcga aagtatcttt cttacctctt gagcacctgg gtctctcact aatggctcta
     3361 ttggtcgtga aggtgtattt tgcaatcgtt gcagacgttc acgaatagat tcaaccatgt
     3421 accatacaga gaaagatttg ttaataagga tttattcagt ggagaagtta tttttctttc
     3481 caaatatccc ctgcctttgt aaatgctaat tttcgctgga attttgagtt tttgatgtaa
     3541 atctgcgtcg tcccaatatc actatgacca gcataggatt ttatcgcaaa agagtctacg
     3601 ccctcgtccg ccatatgctg caatcggctg tgcctaaaca tatgaggatg cagatcacga
     3661 tcaagtagtt cctggccata tttcttgagg ttataccata tggttatagg ttttatggca
     3721 aatatcaaag aatttggatt ggtaatctca ttttcaccaa ggtaggtttt aagcttctct
     3781 attgttgctt tctgaaagta tacggttctt ggtttcctcc cctttcccat gacctgcatt
     3841 tctcctgtat ctatatcaat atcctttatc cgtgcatttg ccagctctga gactcgtgca
     3901 cccgtatcat ataataatcg tacaattagg ttatctcgct gatttttgat attgtctccc
     3961 agatagagaa tttctttctt tgataacacg gaggctgcta atttctcctc atcagtaatc
     4021 gcagaaaggt tccgcttctt gaatgttgct aattccttga tctgtttgtc ttcatatccc
     4081 tttgatttga gatatatcca taatgcgtac gtcgctagtg ggtagtttct ttctttgaga
     4141 taagggttgt ggagcttttg taaggattcc agtgcttgac ctggtgatgt ggtttcaatg
     4201 aattttgcta gtatgagaat gccttgtttt gttttctccc ctaaaccttt tccattcttt
     4261 ttgctaaatg cattaagaaa atcttcaaag agcaacagtt catccttttc catggcaact
     4321 aaagaataga aggtatatag tttaatacct tttggtaaga gctatttttg aaatagagga
     4381 attatttcta gttatagtat ttttgtag
//
LOCUS       DATDZU010000074         2093 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1537952, whole genome shotgun sequence.
ACCESSION   DATDZU010000074 DATDZU010000000
VERSION     DATDZU010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537952"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..658)
                     /gene="alaE"
                     /locus_tag="VJJ79_02525"
     CDS             complement(170..658)
                     /gene="alaE"
                     /locus_tag="VJJ79_02525"
                     /inference="COORDINATES: protein motif:HMM:NF018333.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0034639 - L-amino acid efflux
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HLC22624.1"
                     /translation="MFHEKKTLEEMVGKEMSHVRHLYQHYHRQYLVDYSIYTPFYTIA
                     MGTGEYFIAGLESDEVLKLRVIGAATDLVGSFLYGYSRERWAMLWHTNAQSSRLRKFF
                     VDSSMSIAFAIPYGLALFLVGADRKEASVALVVGTVTGRAYGYLLDKWRKRWGTTPTL
                     DV"
     gene            713..1474
                     /locus_tag="VJJ79_02530"
     CDS             713..1474
                     /locus_tag="VJJ79_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22625.1"
                     /translation="MKSIYWCEFPREYNCKKLAAMLGKRKIVIYLACSSRGEYETWKK
                     KVQAYSKNIEVNAWPTLPFSEGYWFSGFTKKEMIDQLDQYRGLKIKIDIEPPKPKGKY
                     SFTTSIRWLVLNFFRRAPNSKYLQNKIKKLSKDTDIILSTFPLPKFLLRHWGWEENSR
                     LHYNYMHYSTFVPKGVRWLYNSYYKWFMKKNEDAYFAVGLVGTGIFRNEPIYKNIDEI
                     KKDMEFLRKNGAQTLVFFRIESLIDRGKEWLEATF"
     gene            complement(1464..>2093)
                     /locus_tag="VJJ79_02535"
     CDS             complement(1464..>2093)
                     /locus_tag="VJJ79_02535"
                     /inference="COORDINATES: protein motif:HMM:NF024918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HLC22626.1"
                     /translation="LYDQADLVVIPTFLRPQERHLGYNYIDPVLRVHPNDLPSENVLM
                     KKFHLKRKPVLVMLGGSDFGTTLAKHINAIAPSIDEDFIIFGGNLDIHCAKNVRYFHY
                     SADFLKYLKICKGVITLAGHNTLSESLVYKKPVLCFPIQDHIEQVLNAYALEDMIMVS
                     HDSSYKHVQKVLPEFLKNISHIEKKVAGLNVKGNGAEQVVRFIDLALKK"
BASE COUNT          706 a          446 c          398 g          543 t
ORIGIN      
        1 aaacaatgcc aaaagcaaag ccgtacgaga ttgaaataaa tatcgacgcc tcgccgatag
       61 caagtgtcag aagtatcctc gaaagatatg ttaaaccaaa tgtcaaagat gaaatactag
      121 atgcactaaa accatatatc cgcgaataga agctacaaaa gtttcttaat tagacatcta
      181 acgtcggcgt cgtaccccac cgttttctcc atttatctag aagatacccg tacgcccgtc
      241 ctgttactgt cccaacaaca agcgcaacgg atgcttcctt gcgatcggca ccgacaagaa
      301 acaatgcaag accataggga atggcaaatg ctatagacat cgaactatca acgaagaatt
      361 ttctcaagcg cgaactctgt gcattggtat gccacaacat tgcccatcgc tcacgagaat
      421 agccatagag aaaagagcca acgagatctg tagcagctcc tatgacacga agttttaaaa
      481 cttcatcaga ttcaagacct gcaataaaat attctccagt acccatggca atcgtataga
      541 atggggtata gatactataa tccacaagat actgtctatg gtagtgttga tagaggtgcc
      601 gtacatgaga catttccttg ccaaccattt cttcaagcgt tttcttctcg tgaaacattt
      661 ggaacccaga aaaagaaacg gtttatatag ttttcttgct acttttaaat ctatgaaatc
      721 tatctactgg tgcgagtttc cacgggaata caactgtaag aagcttgctg caatgcttgg
      781 aaaaagaaag atcgtgatat acctcgcttg tagttctcgg ggagagtatg aaacatggaa
      841 gaaaaaagtg caggcgtatt caaaaaatat tgaagttaac gcatggccaa cattgccatt
      901 ctcagaaggc tattggtttt ctggctttac gaaaaaagaa atgatagatc aattagacca
      961 gtatcgtggg ctaaaaataa aaatagatat cgagccacca aaaccaaaag gtaaatattc
     1021 attcacaaca agtatccgct ggctagtatt aaactttttc cgtcgagcac caaacagcaa
     1081 atatcttcag aataaaataa aaaaattaag taaagacacg gacattatcc tctccacgtt
     1141 tcccttgcca aaatttcttt tacgacactg gggctgggaa gaaaactcgc ggttgcatta
     1201 caactacatg cactacagta ccttcgtgcc gaaaggagta cgatggttgt acaacagtta
     1261 ctataagtgg tttatgaaaa aaaacgagga cgcatatttt gcagtcggac ttgtcggcac
     1321 aggcatcttc cgcaacgaac caatctacaa aaatatcgat gaaataaaaa aggacatgga
     1381 atttttacga aaaaacggag cacaaacgct cgtattcttc cgcatagaat ctctcatcga
     1441 tagagggaaa gaatggctcg aggctacttt ttaagagcaa gatcaataaa tcttaccact
     1501 tgctctgcac cgtttccttt cacgttcaac cccgcaactt ttttctcgat gtgagaaatg
     1561 tttttgagaa attcgggcaa tactttctgc acatgtttgt aggaactatc atgactcacc
     1621 ataatcatat cttcaagcgc atacgcgttc aaaacttgct caatatgatc ctgaatagga
     1681 aaacacaata caggcttttt gtacacaaga gactcagaaa gtgtgttatg tccggcaagg
     1741 gtaataaccc ctttacaaat ttttaagtat ttcaaaaaat ctgcactata atggaagtag
     1801 cgcacattct tcgcacagtg gatatctaaa tttccaccaa agataataaa atcctcatct
     1861 atagacggcg caatggcatt aatatgtttc gctaacgttg tcccaaaatc agatccgcca
     1921 agcatcacaa ggacaggctt tcgtttcaaa tggaatttct tcattagcac gttttctgac
     1981 ggcaagtcat ttggatgcac acgcaagaca gggtcaatgt aattgtaccc gaggtgccgt
     2041 tcttgcggtc gtaagaaagt cggaataacg acaagatctg cctggtcata caa
//
LOCUS       DATDZU010000075         8027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_549089, whole genome shotgun sequence.
ACCESSION   DATDZU010000075 DATDZU010000000
VERSION     DATDZU010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 8027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8027
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_549089"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1140
                     /gene="mutS"
                     /locus_tag="VJJ79_02540"
     CDS             <1..1140
                     /gene="mutS"
                     /locus_tag="VJJ79_02540"
                     /inference="COORDINATES: protein motif:HMM:NF003810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HLC22627.1"
                     /translation="LHMIRKDGRQYLSSLEAKERERTGIKNLRIGYNRVFGYYFEVSS
                     GNMHLVPQNFLRKQTLTNYERFVTEELKREEEKILTAQEKIGELEYSLFLDLLKEVVQ
                     YTEAVQKAAQQVAELDVLCSFAQVAVENNYVKPLVDTSAVLDILEGRHPVVELEVNYV
                     ANNTQMSDSEIMIITGPNFAGKSCYMKQVALLVLMAQIGCFVPAKHARIGMIDRIFTR
                     IGAYDDLVAGQSTFMVEMNETANILHHATTRSLVLLDEIGRGTSTYDGVSIAWAVLEY
                     LHHHVKAKTLFATHYHVLNKLAASFPRMRNYNIAVKEDGDEIIFLRKLIEGGTDKSFG
                     VYVAKLAGLPEEVITRALEVQHELEDKDKLDRIQAKTLEEQKRLF"
     gene            complement(1159..1470)
                     /gene="grxD"
                     /locus_tag="VJJ79_02545"
     CDS             complement(1159..1470)
                     /gene="grxD"
                     /locus_tag="VJJ79_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020768119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HLC22628.1"
                     /translation="MNEEIKNRIETMIRSKKVFLFLKGTPESPKCGFSLRVIQILKNL
                     HVDFGYCNVLEEDDIRQGIKEYADWPTIPQLYIDGKFIGGCDIAEELYRSGELQKCIS
                     K"
     gene            complement(1467..1697)
                     /locus_tag="VJJ79_02550"
     CDS             complement(1467..1697)
                     /locus_tag="VJJ79_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010574909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HLC22629.1"
                     /translation="MPIATIKVKIEQGLPGAKVEITDPRKDGRHLKAIVLYKGFKGKS
                     LIDQHRMVYGTLRKELKEELHTLSIETHEEEE"
     gene            1780..2529
                     /locus_tag="VJJ79_02555"
     CDS             1780..2529
                     /locus_tag="VJJ79_02555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22630.1"
                     /translation="MKKGQMTLFVIVGIVFVAFVVLVYFLAFQKPSIEKEVAEITSLE
                     DELVALEDYVQDCSDARLLTGMNTFGRQFALLDAERPYSIYGPPLFYADGEKNVPELS
                     SVQKEIETLIEEEVSDCVQAYPLTVADSLDVGRTSVRLEFEEETTAIVSVDATLLFEN
                     KSISLIDDITSVQNGSIKNYLAVADLFVADYIKNNGTFCISCFVAYNEKYGVTFSIIP
                     VGEEQLVIMNDPNYLVEGIPYEFRFGVENIA"
     gene            2495..4513
                     /locus_tag="VJJ79_02560"
     CDS             2495..4513
                     /locus_tag="VJJ79_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22631.1"
                     /translation="MNSDLELRILRKFLLLFFVIFFSLSLVTGQELSWNVGKYILTGE
                     DVSEGIGGELRFSDFESDGVVLEITRTSEEFVILMEGVRGTLEADGEVHGVAETDGAY
                     ISIQADPSADQLIRELDDGVEFTYNIPGDELTIRKGHMTVGGQGVTPDKSNEITVVGN
                     DVFLDGQATLDDVGDVEMVGSFVPQADGVLFSGVGLIDRGDGWLSYTGDFIFANDAFS
                     AEDYEGAYFQQRSTSLKLKSVDGTMLWYKPLVGNKILDKRQEEEAFHFFLTDGGEVTV
                     TNREETRQTPLVDVTDDTGVKVDNGWFTQDEGYLFIEPPTIETPFDLSGAATTLPLVE
                     HFPDDSEVIFSSTNSFVSKTSGREIMRYNDLGASITDDFSDNDVRTIEDLEKAWPQFT
                     FKIEQTGEMVYTPSSATIGVTDQWLKDHGSTTPMKTLIFSDKRSSYGLSTTKTIAFSD
                     ALYSITKSEEELLANYGTDRELAGNPYRILTHENAHLVVGARHSLLEEYNAIVETALE
                     NIARDEQYTDINREVYAHVRSGDTAEFLQDAGTDGLEWYAHKGNPEYLSGLYLDICFY
                     HSEHDSTMKQCQLQIEQFAEKYGLPAGYALRNYGTKTEPQFKEMPSTWIEEPILQRYY
                     RANLGNEYQRDVYTKLAQLAYDSDQISSVECKIILIHDCEKGVLWSPR"
     gene            4562..6214
                     /gene="mutL"
                     /locus_tag="VJJ79_02565"
     CDS             4562..6214
                     /gene="mutL"
                     /locus_tag="VJJ79_02565"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HLC22632.1"
                     /translation="MIHVLDEALVNKIAAGEVVERPVNVIKELVENAVDAHATHIFID
                     VTDTLISVHDDGVGMSRLDLEISILRHATSKINSFDDLQHVATHGFRGEALASIAAVS
                     DLIILTRRKEDMEGSELHVEGGVMRSLRSLGSPIGTTVLVRDLFFNTPVRKKFLDTKE
                     FERIVEFLEKFFLGTTVAVRLKLYDKVVLEVNADTLLDRIVQVYGLDVAKHLAVIEFA
                     DSGIKLKGFVSKPSLLKRDRSQQAFFVNERLVESDEVSSALYDAYKSILFVNKHPLAV
                     LSLTLDGVDVNVHPTKKIVKFSSPEKVYKAVFDAVRSIFREQSVEFSMQGTLPERSFS
                     FSTEENRRFQPDTQRSLLISSPKEHEGYVHFPSLRLLGNVAKTFFLAESPEGLMLIDQ
                     HVVEERINYEKFMAQYMNGAVAVQELLQPEVLELSMKEAMIVQRNLPLLQTLGFSLED
                     FGETTFRLSTVPVLFNRVKGVELLKDLLTDFREAEKEKIVTRMACRSSIKAGDFVSSE
                     EMYALLKKLDQCEFPYTCPHGRPAMVKISLDDVEKMFRRKGF"
     gene            6262..6525
                     /locus_tag="VJJ79_02570"
     CDS             6262..6525
                     /locus_tag="VJJ79_02570"
                     /inference="COORDINATES: protein motif:HMM:NF014723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VapB family protein"
                     /protein_id="HLC22633.1"
                     /translation="MAVKTITITEEAYKVLREKKGMDESFSRTILRVVGERPLDEFVG
                     ILSKGGAERLEKAIRGAKKQYAEEYQKRIIRLATELGERHGSS"
     gene            6512..6904
                     /locus_tag="VJJ79_02575"
     CDS             6512..6904
                     /locus_tag="VJJ79_02575"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HLC22634.1"
                     /translation="MVLLETSFIVDLFKGRPVAVDLYRELKTRRQNICVSSPTIMELW
                     EGVQYAKLSHKERAKVEEMLVTVTVLPLDGKAAKYAGEIRAASKKSGMSVDIIDCLIG
                     AIALANGEILVTRDSDFAKIPGLRLLKY"
     gene            6953..7543
                     /locus_tag="VJJ79_02580"
     CDS             6953..7543
                     /locus_tag="VJJ79_02580"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLC22635.1"
                     /translation="MKVLAVGDIEGDRTLAEKFAAQADAENVDAVLVCGDIVDDESNA
                     NGVLAVFRKPVLFVPGNHDSPDIAEFIAEFYKVKNLHGYGYKKGDFGFFGCSSVNLGI
                     WQLPERDIFELLKKGAKYVDDCKKKVLMSHVHPARSRMSLVSGFEGSEGLRKAIDELQ
                     PDIVFCAHVGEAEGIEELIGKTRVINVGRRGKIFEL"
     gene            complement(7638..>8027)
                     /locus_tag="VJJ79_02585"
     CDS             complement(7638..>8027)
                     /locus_tag="VJJ79_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22636.1"
                     /translation="YILINILFYMENTTESLENMIEGVLFFHSETGTEGGYWAFQDLK
                     YILSKNRWSYEGLHILEDGDNLTIYNPDNKAEVVWSGVIALKQHPLFTESASGLWIHA
                     DQAGIDRDVWAEYFFKEYPAKLIHGKS"
BASE COUNT         2246 a         1471 c         1934 g         2376 t
ORIGIN      
        1 ctgcatatga taagaaaaga tggacggcag tacctttctt cccttgaagc aaaagaacga
       61 gaacgcacag ggataaaaaa cctgcgcata ggatacaaca gggtatttgg ctattacttt
      121 gaagtctctt ccggaaacat gcacctcgtg ccgcagaatt ttctccgaaa gcaaacgctt
      181 accaattacg aacggtttgt tacggaagaa ttaaagcgcg aagaagaaaa aattcttacc
      241 gcgcaggaaa aaatcggcga gcttgaatat agcttgtttc tagatctttt gaaagaagtt
      301 gtgcaataca cggaagccgt gcaaaaagct gcgcagcaag ttgcagagct cgatgttctt
      361 tgttcgtttg cacaggttgc cgttgaaaat aattatgtca agcctcttgt ggatacgtct
      421 gccgttttag atattctaga agggaggcat cctgttgtgg aacttgaagt gaactacgtg
      481 gcaaataata cacagatgtc tgactctgaa atcatgatca tcaccggacc gaactttgcg
      541 ggtaaaagct gttacatgaa acaagttgcg ttgcttgtgc tgatggcgca gatagggtgc
      601 tttgtgccgg cgaagcatgc gcgcattggt atgattgata gaatttttac caggattggc
      661 gcgtacgatg atctcgttgc cggacaaagt acttttatgg tagaaatgaa cgagacggcg
      721 aacattcttc atcatgcaac tactcgtagc ttagttcttt tagatgaaat cggaagaggg
      781 acgtcaacgt atgacggcgt gagcattgca tgggcggtcc ttgaatactt gcaccatcat
      841 gtgaaagcaa aaacgttgtt cgcaacgcac tatcatgtgc tcaacaaact tgctgcatcg
      901 ttcccgcgga tgcgaaacta taacattgcc gtcaaagaag atggcgatga gataattttt
      961 ctcaggaagc ttattgaggg cgggacggat aaaagttttg gcgtctatgt tgcaaaatta
     1021 gccggattgc cggaagaggt tattacacgc gcgcttgagg tgcaacacga attggaagac
     1081 aaagacaagt tggatagaat acaggcaaag acactcgagg aacagaaacg gttattttag
     1141 aatccctcta tttttgattt atttgctgat acatttctgc agttcgccag agcgatacag
     1201 ttcttccgcg atatcacaac cgcctataaa ttttccgtcg atatacagct gcggaatcgt
     1261 cggccagtca gcatactcct taatcccttg acggatgtca tcctcttcga gaacgttgca
     1321 atagccaaaa tccacgtgta agtttttaag aatttgaatc acacgcaggg agaatccaca
     1381 cttaggagac tcaggcgttc ctttcaggaa taaaaatact ttttttgacc taatcatggt
     1441 ttctattctg ttcttgattt cttcgttcat tcttcttcct cgtgtgtttc aatgcttaaa
     1501 gtatgaagct cttcttttag ttcctttctt aatgtgccgt agaccatgcg gtgctgatct
     1561 atcaatgatt ttcctttgaa tcctttgtag aggactatag cctttaggtg cctcccgtct
     1621 ttcctcggat cagttatttc cacttttgct ccaggaagtc cctgctctat ttttaccttg
     1681 attgttgcta ttggaatcat ataaaaaata tcttttggct tgtttataat acttacgaat
     1741 tccgaaaaag aaataaatgc agtttgtttt ctttgtcctg tgaaaaaggg gcagatgaca
     1801 ctgtttgtta ttgttggcat cgtttttgta gcttttgttg tcctcgtgta ttttctcgcg
     1861 ttccaaaaac cttccataga aaaagaagtt gctgagatca cttccctcga ggatgaattg
     1921 gttgcgcttg aagattatgt gcaggattgc agcgatgcac gtttgctcac tggcatgaat
     1981 acgttcggaa ggcagtttgc gttgctggat gcggaaaggc cgtattccat ttatggcccg
     2041 ccgttgtttt acgccgatgg agaaaagaac gtgccggaac tttcttctgt ccaaaaagaa
     2101 atagaaactc ttattgaaga ggaagtctct gattgcgtgc aggcgtatcc tttgaccgtt
     2161 gcggattctc ttgatgttgg aagaacgtct gtgcgtttgg aatttgaaga agagacaacg
     2221 gcaattgttt ctgtcgatgc gacgcttctt ttcgagaata aaagtatttc tctgatagac
     2281 gatatcacct ctgtccagaa tggcagcata aaaaattatc ttgctgttgc tgatttgttt
     2341 gttgctgatt atataaaaaa caatggaacg ttttgtattt catgttttgt tgcgtacaat
     2401 gaaaagtatg gtgtcacgtt ttctattatt cctgtgggcg aggagcagct tgttattatg
     2461 aacgatccta attatcttgt cgaagggatc ccatatgaat tccgatttgg agttgagaat
     2521 attgcgtaag tttttacttt tgttttttgt gatatttttt tctctttctc tcgttactgg
     2581 acaagaactt tcgtggaacg tcgggaaata tattcttacc ggtgaggatg tgagtgaagg
     2641 catcggagga gagctgcggt ttagtgattt tgagagcgat ggtgttgttc ttgaaattac
     2701 tcgtacatcc gaggaatttg ttattttgat ggaaggcgtg cgcggaacgc ttgaggcgga
     2761 tggagaagtg catggcgttg cggaaacaga tggtgcgtat atttctattc aagcagatcc
     2821 gtcagcggat caactaattc gtgaattaga tgatggcgtc gagtttacct acaacattcc
     2881 tggagatgag ctgactattc gtaaagggca tatgactgtt ggaggacagg gtgttactcc
     2941 tgataaatct aatgagatta ctgtcgtcgg gaacgacgtt tttcttgacg ggcaggcgac
     3001 gctggatgat gttggtgatg ttgagatggt aggatcattt gttccgcagg cagatggcgt
     3061 tctcttttcc ggtgtaggcc tgattgatag aggagatggt tggctgagtt atactggaga
     3121 ttttattttt gcgaatgatg ctttctctgc agaagattat gagggtgcgt acttccaaca
     3181 aagaagcacg tcgctgaagc tcaaaagtgt tgatggaacg atgttatggt ataagcctct
     3241 tgtgggaaat aaaattcttg ataaaaggca agaagaggag gcgttccatt tctttttgac
     3301 agatggcgga gaagtaactg taactaatag ggaagagact cggcagacgc cccttgttga
     3361 cgtgactgat gatactggtg tgaaggttga caacgggtgg tttacccaag atgaaggcta
     3421 tctgtttata gagcctccca cgattgagac cccgtttgat ttgagcggag ctgcaacaac
     3481 actccctctc gttgagcatt tcccagatga ctctgaggtt attttctcat ctacaaatag
     3541 ttttgtttcg aaaacatctg gtagagaaat aatgcggtat aatgatttag gcgcttctat
     3601 cactgatgat ttttctgaca atgatgtgcg aacgattgaa gacttagaaa aagcatggcc
     3661 tcaatttaca tttaagatag agcaaactgg agaaatggtc tatactccct cttctgcaac
     3721 tatcggtgtt acggatcaat ggctcaagga tcacggttcc actacgccaa tgaagacact
     3781 gattttttcg gataaaagga gttcctatgg cctttctact acgaaaacca ttgctttttc
     3841 tgacgccctc tatagcatta caaagagtga agaagaactt ttagcaaatt acggcacgga
     3901 cagggagttg gcagggaatc cgtatcgtat tctcacccat gaaaacgcac accttgttgt
     3961 aggtgctcga cacagcttat tagaagagta caatgcgatt gtagaaacag cattagaaaa
     4021 tatagctcgt gatgaacaat acacagatat taatcgtgag gtatatgcgc atgttcgatc
     4081 aggagatacg gcagaatttt tacaagatgc aggaacagat gggctagaat ggtatgccca
     4141 taagggaaat ccagaatatc tttccggtct ttatttggac atttgttttt atcattcgga
     4201 gcatgattct accatgaaac aatgtcaatt gcaaattgag cagtttgcag agaaatatgg
     4261 cttacctgca ggatatgctt tacgaaatta tggaacgaaa acagaaccac aatttaagga
     4321 aatgccttca acgtggattg aggagcccat tctacagcga tactaccgtg caaatttagg
     4381 gaatgaatat caaagggacg tgtacactaa acttgcgcaa ttggcctatg attctgacca
     4441 gatatcaagt gtggaatgta agattattct tattcatgac tgcgagaaag gcgttctctg
     4501 gtctccacga tagcgttgaa gtttggatat tcttttaaat ctttttttct ttttttttgt
     4561 tatgattcat gttcttgatg aagcgcttgt gaataagatt gctgcagggg aagttgtcga
     4621 gcgacctgtg aatgttatca aagagctcgt agaaaatgct gtcgatgcac acgcgacgca
     4681 cattttcatt gatgtgacgg atactctaat ttctgtgcac gatgacggtg tagggatgtc
     4741 ccgtttagat ttagaaattt ctatcttgcg ccacgcgacg agcaaaatta attcctttga
     4801 tgacttgcaa catgtagcaa cgcacgggtt tcgaggagag gcgcttgcga gcattgctgc
     4861 cgtctcagac cttataatcc tgacgcggag aaaggaagat atggaaggct ctgagttgca
     4921 tgtagagggc ggagtgatgc gatcgctgcg gtctctcggt tctcctattg gaacaacagt
     4981 tcttgtccga gatttatttt tcaatactcc agtacgaaaa aagtttttgg acacgaaaga
     5041 gtttgaacgc atcgttgagt ttctggaaaa attttttctc ggaacaacgg ttgccgtgcg
     5101 tttgaagttg tacgacaagg ttgttcttga agtgaatgca gatacgttgc ttgataggat
     5161 tgtgcaggtg tacggtcttg acgttgcgaa acatttagca gtgatagagt ttgcagattc
     5221 tggaataaaa ctcaagggat ttgtgtcgaa gccttcattg ttaaaacgcg accgaagcca
     5281 gcaagccttt tttgttaatg agaggcttgt tgaaagtgat gaggtctcca gtgcgctgta
     5341 tgatgcatac aaaagtatat tattcgtcaa taaacatccg ttggcagttc tttctttgac
     5401 gcttgatggg gttgatgtga acgtgcatcc gacgaaaaag attgtcaaat tttcttctcc
     5461 tgaaaaagta tacaaagccg tgtttgatgc agtacgctcc atattccgtg agcagtcagt
     5521 tgagttttct atgcaaggga cgttgcccga aagatcgttt tctttttcca cagaagagaa
     5581 tagaaggttt caaccggata cgcagcgaag cctgttgata tcttcaccca aggaacatga
     5641 agggtacgta cattttcctt cccttcgctt gcttggaaat gtcgcgaaga cattttttct
     5701 tgccgagtcc ccagaagggc tgatgcttat cgaccagcat gtagtggaag aacggataaa
     5761 ctatgaaaag tttatggcgc agtacatgaa tggagctgtt gctgtgcagg aattgttgca
     5821 gccggaggtg ctggagctaa gtatgaagga agcgatgatt gtgcaacgga accttccatt
     5881 attgcaaaca cttgggtttt cactggaaga ttttggggag actacttttc ggctctctac
     5941 tgttcctgtg ctgttcaatc gagtaaaagg tgtggaacta ttgaaagatc tccttactga
     6001 ttttcgtgag gccgagaaag aaaagattgt gacgcgcatg gcgtgccgga gctcgatcaa
     6061 agcgggggac tttgtttcct ctgaagagat gtatgcactg ctgaaaaagt tggaccagtg
     6121 cgagtttccg tacacgtgcc cgcatgggcg accagcgatg gtgaagatat ctctggacga
     6181 cgtagagaaa atgtttcggc ggaagggatt ttaatgtacg tttagcaaag tttataaatg
     6241 taaacatacg tacacttaca tatggctgta aagacgataa caataaccga agaagcttac
     6301 aaggtattac gagagaaaaa aggaatggac gagagtttta gcaggactat cttgcgtgtt
     6361 gttggggaac gtcctctaga tgaatttgta ggcattcttt ctaagggcgg ggcagagaga
     6421 cttgagaagg caattcgagg cgcaaaaaaa caatacgctg aagaatatca gaaacgaata
     6481 atcagacttg cgaccgaact tggagaaagg catggttctt cttgagactt cttttatagt
     6541 agatctcttc aaaggacgcc ctgttgcagt agatttatat cgtgaactca aaacaagaag
     6601 acaaaacatt tgtgtttctt ctcctactat tatggaacta tgggaaggtg tacagtatgc
     6661 aaagctttca cataaggaaa gagcgaaggt agaagagatg cttgtaacag tgactgtact
     6721 tccccttgat ggaaaagccg caaagtacgc tggagagatt cgtgcagcat ccaaaaaatc
     6781 aggaatgagc gtcgatatca tagattgcct tataggagcc atagctcttg ctaatggtga
     6841 gattcttgtc acgcgagatt ctgactttgc aaaaattcct ggattgcgac tcctaaagta
     6901 ctgacttttt gattgagaaa cgtttataaa tctctttttt tgactatttt gtatgaaagt
     6961 tttagcagta ggagatattg aaggagaccg aacgctcgcg gaaaaatttg ctgctcaggc
     7021 agacgcagaa aatgttgatg cggtgcttgt ctgtggggat attgtcgatg acgagagcaa
     7081 tgcaaacggc gtccttgcag tatttagaaa acccgtttta tttgttccgg gaaaccacga
     7141 ttctccggac atcgccgagt ttattgcaga attttataaa gtaaaaaacc tccacggcta
     7201 tggctacaag aaaggtgact tcggattctt tggatgcagt tccgtaaact tggggatctg
     7261 gcagttacct gaacgtgata tttttgagct cttgaaaaaa ggagcaaagt atgttgatga
     7321 ttgcaagaaa aaagtgctca tgagccacgt gcaccctgcg cgaagcagaa tgagccttgt
     7381 ttcggggttt gaaggcagcg aaggattacg aaaggcaatt gatgaactgc aaccagacat
     7441 tgttttttgt gcccacgtcg gagaagcaga gggaattgaa gaattgattg gaaagacgag
     7501 agtcataaat gttggaagac gcggaaaaat ttttgaattg tgagagagcc caagatttac
     7561 tataatcctt tcatttcgtc aaagagcgat gtagaaacct ttttacaatt tcctttattc
     7621 aataattcta aaacgtttca actttttcca tggattagtt ttgcaggata ttctttgaag
     7681 aagtattctg cccaaacgtc tctatcaatg ccagcttgat ccgcatgaat ccacaatcca
     7741 gatgcagatt ctgtgaataa tggatgttgt tttagagcaa taactccaga ccatacaacc
     7801 tcagctttat tgtccgggtt atagatcgtt aagttatccc cgtcctcgag gatgtgtaac
     7861 ccctcatacg accatcggtt cttagaaaga atatatttta aatcttgaaa agcccaatat
     7921 cctccttccg tacccgtttc tgaatggaaa aaaagtactc cttcgatcat attctctaag
     7981 gattcggttg tattttccat atagaagaga atgtttatta gaatata
//
LOCUS       DATDZU010000076         5024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1032738, whole genome shotgun sequence.
ACCESSION   DATDZU010000076 DATDZU010000000
VERSION     DATDZU010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5024
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1032738"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1519)
                     /locus_tag="VJJ79_02590"
     CDS             complement(<1..1519)
                     /locus_tag="VJJ79_02590"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HLC22637.1"
                     /translation="MKKAILMLFLTLLALKLLLIPLVTVPLGFSDSLAYFEQAKAFYE
                     TGSIKEVIETAKFPPLYAMVISPSYFSEDMETVFFVMKIINAIISSLVIIPASLLARE
                     FMSKKKSLMVATITAFLPGIFSMTFYVLSENLFLPLFLFAVYFVLKTYTDDKKYWSML
                     AGATISFCLLTRVAAVVFIPLLILMTLLHIKKRWKKMASTLLWATLTILPWLIVKGTQ
                     TKASTGAFQGYNAELFAVINIPYLPTKILWSFLYLDYLIIGAGIIIFILSLSLLFNYK
                     SCTNNEKLFLIIVGIITICTIALAANNSGNVSPYTDHRVIGRYLITLFPLLIPLSFLA
                     LEKEVLKKKVIVGTAGFILVVTPLIIFGTFFPINNTEWIPIELLKLGTNYPSVISTIL
                     ITSILTLITLSFLGVKQWKTKTYATIIIIYFITVSMLNTSAIVYDTNVRWIPIEEVQL
                     GRWISENIPPEATFYFDPNDLEYFEEGTTIDRTNENDRPVTIIAYWIRGNIVNSGE"
     gene            1608..3137
                     /locus_tag="VJJ79_02595"
     CDS             1608..3137
                     /locus_tag="VJJ79_02595"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22638.1"
                     /translation="MREAHLGGYDFNGFKVLFVFPNLNLATNLMPEKVTRYSKPDSPH
                     YGIAQLAAVLKENNASVKVLDMRLGYGFDDLLKIVDSFQPDMIGITLIATRIKLSYAM
                     VDRLKELYPRIYTVAGGTHVASFKEKVFRDCKGLDFAVKREGELTFLQLIDAVRTKET
                     DYSFIKGLIFKKDGAVVETEDMPMIDDLDALPLPAYDMFELEHYYAWQRGVVPIVTSR
                     GCPFRCVFCSINLTMGYKFRTRTPSNVVDELEYWYQNGMKRFDINDDEFSFFPKRVEE
                     ICDMIVARGLKIELRLFNGIRVTDVYPELLAKMKKAGFTAITYALESGSPKVLKNIKK
                     AITVEQAMKAVEMTKEVGIETTCNFIIGHPGETYEDALMTLEAIKNVKADRLNINNSV
                     VYPATELYEWVSKNARFTLDVEEYLNLSWPGKSDFPFFETDDFTVEQRKEILRKAILL
                     FREKIIRTRVKEPFASIYVLASRSNFLYSIGEILKTRPFVNKYVKPLLFRKYGVNLAR
                     T"
     gene            complement(3143..4156)
                     /locus_tag="VJJ79_02600"
     CDS             complement(3143..4156)
                     /locus_tag="VJJ79_02600"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLC22639.1"
                     /translation="MNNSHIGIIVPFVSWNTYVKECVDGCRELDYDNWHLILVPDSPI
                     SLPEPLQEDKRISIVVSGDVTIARKRNLALNTFQNNDYYACIDSDAYPEKSWLKNAVT
                     TFAMHENVWAVGGPNICPKNEAIKEKAVGNSLKSFLVSGTRAFRKKISSSRFCVDLPT
                     CNLIISKETIESLKGFNENLITGEDIEFCNRIVQRNKKIYYANNVIVYHHNRPLWKPF
                     FLQRITYGLSVFKVFRENKSLFNIFLFLPLLFLLFIVSAPFIFIYSTEIRKVTASIIL
                     GYFCIVGIETLRYTEKRSEIPLTFLALLMGNISPGIGSLLALLHIKVDIKKIYKNFNQ
                     ETK"
     gene            complement(4153..>5024)
                     /locus_tag="VJJ79_02605"
     CDS             complement(4153..>5024)
                     /locus_tag="VJJ79_02605"
                     /inference="COORDINATES: protein motif:HMM:NF024584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22640.1"
                     /translation="GEPFIRKDMFEIVRAYITNAKVQSVFITTNGMFTEKIREFLDKI
                     EYAGINENIIFSISIDNFEELHDLNRKVKGLYKNAIASYFLIQGYQKRNIMANVAITV
                     SQHNYKNVIGIYNHLKNIGVRAITSTIMEEGIIKSIEPKIKTQILQAYKELTDNIRKD
                     TLKKKIDGYRGMQGALMNAKNMIVNKIIQKTYLQKRFISYCSAGTLFGVIYANGDVYP
                     CEILEDKKLGNVRDFNLNFMALWEDKAAKEFKGWVRDTKCNCTFECAWSINIISDPQF
                     IPELLYYSLKSKL"
BASE COUNT         1432 a          886 c         1066 g         1640 t
ORIGIN      
        1 tttctccgct attgacaatg tttccacgga tccagtatgc aatgattgtt actggccgat
       61 cattttcatt cgttctgtcg attgttgtcc cctcttcaaa atattctaga tcattaggat
      121 cgaaataaaa tgttgcttcc ggcggaatgt tctcagaaat ccatctgcct agttgtactt
      181 cttctatcgg tatccaacga acgtttgtgt catatacgat agcagaggta ttaagcatgc
      241 taactgttat gaagtaaatg ataataattg tagcatatgt ttttgtcttc cattgtttta
      301 caccaagaaa agaaagcgtg atcaatgtga gaatgctcgt gatgaggata gtgcttatga
      361 ctgatggata gtttgtcccc aacttcaata attctatagg gatccattct gtattattga
      421 ttgggaaaaa tgttccaaaa ataataagag gcgtgactac gagaataaat ccggcagtgc
      481 caactatcac ttttttctta agcacttctt tttctaacgc taaaaagctt aatgggatga
      541 gcaatgggaa gagtgtgata agatagcggc caataacgcg gtggtctgta tacgggctta
      601 cgttgccgct gttgtttgct gcgagtgcaa tcgtacaaat tgtgataata cctacgatta
      661 tcaggaagag cttttcatta tttgtacaag atttatagtt aaatagcaac gacagactta
      721 gaataaatat aattattcca gcgccgataa ttaggtaatc aagatataaa aaactccaga
      781 gaatttttgt tggaagatat ggaatattga taaccgcaaa gagctccgca ttgtatcctt
      841 gaaatgcacc agtgcttgct ttggtttgtg ttccttttac aatgagccaa gggaggattg
      901 ttaacgttgc ccacaaaaga gtactcgcca tctttttcca tctttttttt atgtgcagca
      961 acgtcatgag aataagaagc gggatgaata cgactgctgc gacgcgtgtc aggagacaaa
     1021 agctgatagt tgcacccgca agcatgctcc aatatttttt atcgtctgta tacgttttta
     1081 gaacgaaata tactgcgaaa agaaaaagtg gtaaaaatag gttttcactg agaacataaa
     1141 atgtcataga aaatattcct ggaagaaacg cagtgattgt tgcgaccatt aggctttttt
     1201 tcttactcat aaattctcgt gcaaggagag aggcagggat tattaccaga gaggaaatta
     1261 ttgcgttgat tattttcata acaaaaaaaa cagtttccat gtcctcagaa aagtaacttg
     1321 gagaaatgac catggcatac agtggtggaa actttgcagt ttctataact tcttttatgc
     1381 ttccagtttc gtagaatgct ttcgcttgct caaaatatgc aaggctgtca gagaatccaa
     1441 gggggactgt aacgagcggt attaggagaa gcttgagtgc caaaagcgtg agaaagagca
     1501 tcaggattgc ttttttcata ggaaattctc cttaagagtg gtttttaact ttttggaagg
     1561 agtattcttc ggaaaatatt taaacggtct attttctatt ttagggtatg cgggaagcac
     1621 atttaggggg atatgacttc aatgggttta aagtcctttt tgtatttcct aatctgaacc
     1681 tagcaacgaa tcttatgccc gagaaagtaa cacggtacag taaaccagat tctcctcatt
     1741 atggtattgc gcagcttgct gctgttctaa aagaaaataa cgcatccgtg aaagttcttg
     1801 atatgcgtct agggtatggc tttgatgacc ttctgaaaat tgttgattcc ttccagccag
     1861 atatgatcgg catcacgctc attgccacgc gcatcaaact ctcatatgcg atggttgata
     1921 gattgaaaga attgtacccg cggatttata cggttgccgg aggcacgcat gttgcatcgt
     1981 tcaaagaaaa agtgttccgt gattgcaagg ggcttgattt tgctgtgaag cgtgaagggg
     2041 aattgacgtt cttgcaacta atcgatgccg ttcgtacaaa agagactgac tattcgttca
     2101 tcaaaggatt gatttttaag aaagatggag ctgttgttga gacagaggat atgccgatga
     2161 ttgacgacct tgatgcactt ccccttccag cgtatgatat gtttgagttg gaacattact
     2221 atgcatggca gcgcggcgtt gttcccattg tgaccagcag agggtgcccg ttccgatgcg
     2281 ttttttgttc aattaatctg acgatggggt acaagttccg tacgcggact ccgagcaatg
     2341 ttgttgatga attggagtat tggtatcaaa atggcatgaa aaggtttgac ataaatgatg
     2401 atgagttttc tttttttcct aaaagagtag aggaaatttg tgacatgatt gttgcccggg
     2461 gattgaagat tgaactgcga ctgtttaacg gcattcgcgt gactgatgtc tatccggagc
     2521 tgcttgcgaa aatgaaaaag gcagggttta ccgcgatcac gtatgcgctt gaatctggaa
     2581 gtccgaaagt tttgaaaaat atcaagaaag caatcactgt cgagcaggcg atgaaagctg
     2641 tggaaatgac caaggaggtt ggcatagaga cgacgtgcaa ctttatcatt gggcatcctg
     2701 gagagacgta tgaagatgcg ctcatgacat tggaagcgat caagaacgtg aaagccgatc
     2761 gtttgaacat aaataacagt gttgtttatc ccgcaacaga actctatgaa tgggtgtcga
     2821 aaaatgcacg atttacttta gatgttgaag aatatttgaa tctttcatgg ccaggaaaat
     2881 ctgatttccc ttttttcgaa acggacgatt ttactgttga gcaaagaaaa gaaattctta
     2941 ggaaagcaat cttattattc cgagagaaga ttatccgaac acgagtgaaa gagccttttg
     3001 catctatcta tgtgttggca agtaggtcta attttttata ttctattggt gaaatattaa
     3061 aaacaaggcc atttgttaat aaatatgtca agccattgct ctttagaaag tacggcgtga
     3121 atcttgcaag gacatgagca cgttactttg tctcttggtt gaagttcttg tatatttttt
     3181 tgatgtccac cttgatatgt aggagtgcca gcaaagagcc aatgcctgga ctgatgttgc
     3241 ccatcaataa tgcaaggaat gttaagggga tttcactcct tttctctgta taccgcaggg
     3301 tttctattcc gacgatacag aagtatccca gaataatgct tgctgttact tttcggattt
     3361 ctgttgaata tatgaaaata aatggagctg agacaatgaa aagaagaaat aagaggggaa
     3421 gaaataagaa aatattgaag agagatttgt tttctctaaa taccttgaag acagaaaggc
     3481 cataagtaat tcgttgaaga aagaatggtt tccataatgg gcggttatga tgatagacga
     3541 ttacattatt tgcataataa attttcttgt ttctctgtac gattctatta caaaattcta
     3601 tgtcttcccc cgtgatgaga ttctcgttaa atcctttcaa tgattctatt gtttctttgc
     3661 tgataataag attgcatgtt ggaagatcta cacagaacct acttgaactt attttctttc
     3721 tgaatgcccg tgttccggag acgaggaagg attttagact atttcctact gccttttctt
     3781 ttattgcttc atttttagga cagatgtttg gaccgccaac tgcccataca ttctcgtgca
     3841 tggcaaatgt agtgactgca ttcttgagcc atgatttttc tggataagca tctgaatcga
     3901 tacatgcata gtaatcatta ttctggaacg tgttcaatgc gaggttccgt tttcgtgcga
     3961 ttgttacgtc cccactaacg acaatagata ttcttttgtc ttcttgcaat ggctctggaa
     4021 gagagatagg agaatctgga actaatatga gatgccagtt gtcgtaatcg agttctcggc
     4081 atccatcaac acattccttt acatatgtgt tccatgagac aaatgggacg attattccaa
     4141 tgtgtgagtt gttcatagtt ttgattttaa cgagtagtat aaaagctctg gaatgaactg
     4201 tggatcagag ataatgttaa tgctccacgc gcattcaaac gtgcagttgc attttgtgtc
     4261 gcgtacccat cccttgaact cttttgcagc tttgtcttcc catagagcca taaagttaag
     4321 attaaagtcg cgaacgtttc ccaacttctt atcttctaat atctcacaag ggtagacatc
     4381 gccgtttgcg taaataacac cgaagagtgt gcctgctgaa cagtatgaaa tgaatctttt
     4441 ttggagatat gttttttgaa taattttatt tacaatcata ttttttgcat tcatcaatgc
     4501 cccctgcatt cctcgatatc catcaatctt cttcttcagc gtgtcctttc taatattgtc
     4561 cgttaattct ttatatgcct gcagaatctg tgtctttatt tttggttcta tgcttttaat
     4621 aattccctcc tccataattg ttgaggtgat tgcccttaca ccaatatttt ttagatggtt
     4681 gtatatgcca atcacatttt tgtagttgtg ttggctcact gttatcgcaa cgtttgccat
     4741 aatatttctt ttttggtatc cttgaattag aaaatatgaa gcgattgcat ttttgtagag
     4801 gccttttact tttctattca agtcgtgcag ctcttcaaag ttgtctatcg atatagaaaa
     4861 gattatattt tcattgattc cagcatattc tattttgtct aggaattctc gtatcttttc
     4921 tgtgaacatg ccgtttgttg ttatgaacac cgattgtact tttgcgtttg taatgtacgc
     4981 ccgcacaatt tcaaacatgt ctttccttat gaatggctct cctc
//
LOCUS       DATDZU010000077         3869 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_374827, whole genome shotgun sequence.
ACCESSION   DATDZU010000077 DATDZU010000000
VERSION     DATDZU010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3869
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374827"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VJJ79_02610"
     CDS             <1..586
                     /locus_tag="VJJ79_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22641.1"
                     /translation="KITPTELAFWHSTIPRVKGRVKLEGDSAIDEHAKNLGYNPLSLH
                     AEDLPFLKDVVAHWEKIRPHFVQVFSSGQAMAGHISTTYNFPDGTSKVWYTDRLRSDH
                     PESLEKALERVRGKPFDAAFSSDFCAYVEGIPVQQHYRHGRLDYYFAQDHFNIEDEKT
                     IQKITAPQELVDLLTFFSANPKTVLERVLGSSKI"
     gene            complement(596..2065)
                     /gene="proS"
                     /locus_tag="VJJ79_02615"
     CDS             complement(596..2065)
                     /gene="proS"
                     /locus_tag="VJJ79_02615"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HLC22642.1"
                     /translation="MAEEQGLTVTKEKNFSEWYTQVIQKADLADIRFGIQGFIVHKPW
                     CFLIIRKLYEYLEAEVEKQGHLPFLFPTVVKEDDLMKEKEHAGFTPEVFWVSEAGSKK
                     LEERFALRPTGEAQIYPTYSLWFRSWKDLPFRGYQSRISVFRNEMVTRPFLRGREFLF
                     FEAHDVFNTHEEALAQIEKDLETCENVIRKKFKIPFFYFKRPSWDKFKGANDTYTPDT
                     LMPDGKRNQLASTHDLGQNFAKAYGIKVKGKDEQEHYAWQTCFGPGIWRIMAALIGIH
                     GDDHGLVVPFDIAPIQIVIIPITFVKQEAASKKVLLLCEKIEEQLKKSGYRVKFDNRD
                     ESPGAKYYQWELRGVPLRIEIGPREVEKKSVSLILRTDGKKKQVTLKDLKKEVEKSAI
                     QVNKDIEKKAEDYFQGRIREADSLAKTKEILKIHRGFVRVSFCSVEKDGEACADKVKA
                     ETEGGYVCGTLYPKEEPAKGKCIVCSKPAQHSVYIAKSY"
     gene            complement(2098..2514)
                     /locus_tag="VJJ79_02620"
     CDS             complement(2098..2514)
                     /locus_tag="VJJ79_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22643.1"
                     /translation="MEKEDIAFAIHDTILNFPKRIEKPRVEFLSKKRFSKMLDLMDLN
                     KHVDKTPCFTVQTHDGKHTLYACEEIIQQLTKNISDEKKKKFVEAITLHELLHIWNHL
                     HVHTADEATFSEQLVAKELKNFYPSHFIVLEEYKRR"
     gene            2653..3555
                     /locus_tag="VJJ79_02625"
     CDS             2653..3555
                     /locus_tag="VJJ79_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22644.1"
                     /translation="MKRKKKKQSLKRKLWAILGLTTFGAVASHLEQMDVSKGCTFSPR
                     ASASLTATAYDNRPEEEKTLLAKILYFETYDEPGAEAVAHVIRNRYLFDTCDSRSLVK
                     NWSCDGEPKAYFGGDDGLLGIVTKSNAVSYKGNNEKTKKKRVYEFSCIPENRAYFQGD
                     VDTNVTGLNKNKLQKMYGILERVLDGTSEDPTGGALYYKNSALTDQLWQNTPGFFLKQ
                     EDCDSVQKIPRDPNGQALSLVRADCRVDIAYQRDHTTNIESHDFYTVRPERTETVHEG
                     ACKFVNGVFAPGGSHERWCRYVKK"
     gene            3598..3671
                     /locus_tag="VJJ79_02630"
     tRNA            3598..3671
                     /locus_tag="VJJ79_02630"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3633..3635,aa:Arg,seq:tcg)
BASE COUNT          990 a          835 c          855 g         1189 t
ORIGIN      
        1 taaaataact cctactgaat tagctttttg gcattctact attccaagag taaagggaag
       61 agtaaagttg gaaggagatt ctgcgattga tgagcatgca aaaaatttag gctataatcc
      121 cctttcgctt catgcggaag accttccttt tcttaaagac gttgtagcgc attgggaaaa
      181 aatacgtccc cattttgttc aggtattcag ttctgggcag gctatggcag ggcatatttc
      241 cacgacatat aattttcctg acggaacgag caaggtttgg tacacggata ggctcaggag
      301 tgatcatccg gagagtcttg aaaaagcctt agaacgggtg cgaggaaaac cttttgatgc
      361 agctttctcc tctgattttt gtgcgtacgt agaaggaatt cctgtccaac aacattacag
      421 acacgggcga ctggattatt atttcgcgca agatcatttc aatatagaag atgagaaaac
      481 tatacaaaaa attactgctc ctcaggaact tgttgactta cttacttttt tttcagcaaa
      541 cccgaaaact gtgttagaac gagtgctcgg tagctcgaaa atataactct ttactttagt
      601 aacttttcgc gatgtacacg ctgtgctgtg ctggcttgct gcagacgatg cattttcctt
      661 ttgctggttc ttctttagga tataatgtgc cgcagacgta gccgccttcc gtttctgcct
      721 ttactttgtc tgcacaggct tctccatctt tttcgactga acagaacgac acgcgaacaa
      781 atcccctgtg tattttaaga atctctttgg tctttgcaag tgagtctgct tcacggatgc
      841 gtccctggaa ataatcctct gccttttttt caatatcttt attcacttgt attgcacttt
      901 tttcgacttc ttttttcagg tcttttagcg tgacttgttt tttctttcca tcagtgcgca
      961 ggatgagaga gacagatttt ttttctactt ctcgtggacc aatttctatt cgcaacggaa
     1021 cgccgcgaag ttcccattga taatactttg cgccagggga ttcatcacgg ttatcgaact
     1081 tcacgcggta accgcttttc ttcaactgct cctcgatctt ttcacagagc aacagcactt
     1141 tctttgacgc cgcctcttgt ttcacaaacg taattggaat gatgacaatc tgtattggtg
     1201 caatgtcgaa cggcacgaca agaccatgat cgtcgccgtg aatgccaatg agtgcagcca
     1261 taattctcca gattcccgga ccgaaacaag tttgccatgc gtaatgttct tgctcatctt
     1321 ttccctttac tttaatgccg tacgcctttg caaagttctg gccaaggtcg tgcgtcgatg
     1381 caagctgatt ccgtttgccg tcaggcatca atgtgtctgg cgtgtaggta tcgttagcac
     1441 ctttgaattt gtcccatgat ggacgcttga aataaaagaa tgggatcttg aacttttttc
     1501 tgattacgtt ctcgcatgtt tccaggtctt tttcaatctg tgcaagcgct tcttcatgcg
     1561 tattaaaaac gtcgtgcgct tcgaaaaata aaaattctct gcccctgagg aacggccgtg
     1621 tgaccatttc gttccgaaat acagaaatcc tgctttggta tcctcgaaaa ggcaggtctt
     1681 tccagcttct gaaccagagc gagtaggtcg gataaatctg tgcttcgcct gtcggtcgca
     1741 aggcaaatct ttcttctaat tttttgcttc cggcttctga tacccagaac acttctggcg
     1801 taaaccccgc gtgttctttt tctttcataa gatcatcttc tttgacaact gttgggaata
     1861 agaacggaag gtgtccttgc ttttctacct ctgcttccaa atattcatac aattttctaa
     1921 tgataaggaa acaccatggc ttgtgcacga tgaatccttg aatgccgaag cgaatgtctg
     1981 caaggtccgc cttttgtatc acttgcgtat accattcaga aaaatttttc tcttttgtaa
     2041 cagtaagtcc ttgctcttct gccatgggtc tgttttaata aggcggattt tatatagtta
     2101 ccgcctctta tattcttcga ggactataaa atggctcggg taaaaatttt tgagttcctt
     2161 tgcaacgagt tgctccgaga acgttgcttc gtcagcagtg tgaacatgaa gatggttcca
     2221 gatatggagc agttcgtgca gcgtgattgc ctcaacaaac tttttctttt tttcgtcgct
     2281 gatatttttt gtcagctgct ggatgatttc ctcgcatgcg tagagcgtgt gcttgccgtc
     2341 gtgtgtttgc actgtgaagc acggcgtttt gtcaacgtgt ttattgagat ccataagatc
     2401 cagcatttta gagaaccgtt tttttgagag gaattctacc cttggctttt ctattctttt
     2461 tgggaaattg agaatggtgt catggatagc gaatgcgatg tcttcttttt ccatattctc
     2521 tttttaggtc ccttcccata tatgtttttt gtagctattt taaaggggta acaaacgaaa
     2581 gatttataaa cctcttttgg ccctactttt gtaaaagagc atgtctttct cgtctggaaa
     2641 gggttttaca ctatgaaacg aaagaagaaa aaacaatcgt taaaaaggaa gctatgggct
     2701 atcctcggtc tcactacttt cggagccgtt gccagccatt tggaacagat ggatgtctct
     2761 aaagggtgca cgttttcccc cagggcgtct gcatcgttga cggcaacagc ctatgataat
     2821 cgccccgagg aagaaaaaac gctccttgca aaaatcctct actttgaaac gtatgacgaa
     2881 cctggtgcgg aagccgttgc ccatgtcatc aggaacaggt atctctttga cacgtgtgat
     2941 tctcgaagtc ttgtcaagaa ctggagctgt gacggtgagc cgaaagcgta ctttggcggc
     3001 gatgatggat tactcggcat tgtgactaaa tcgaatgctg tttcttacaa aggaaataac
     3061 gagaaaacga agaagaaaag ggtctatgaa tttagctgca tccccgagaa tagagcatat
     3121 tttcaaggag acgttgatac caacgtgacg ggtttgaaca aaaataaatt acaaaaaatg
     3181 tatggaattt tggagcgtgt ccttgacgga acctctgaag atccgacggg cggggcactg
     3241 tattacaaga attcggcatt gacggaccag ctctggcaga atacgcctgg attttttctg
     3301 aaacaagaag actgcgattc tgtacagaag attcctcgcg atcctaacgg acaagcacta
     3361 tcattagtgc gtgcggactg ccgcgtcgat attgcgtacc agcgggacca tacgacgaac
     3421 atcgagagcc atgactttta cacggttcgt cccgaaagaa cagaaactgt tcacgaaggc
     3481 gcgtgcaaat ttgtcaacgg tgtttttgct cccggcggaa gccacgagcg atggtgccgg
     3541 tacgtgaaaa agtaggcaaa agacttaata agcttgatag aattctagac gtcttacggg
     3601 tctgtagtat aacctggata gtatacgagg cttcggacct cggggttggg gttcaaatcc
     3661 ccacagaccc attctttatg agcataccgg ctttgcctca atagtctacc ataagtgaag
     3721 gttgccccat aagtgtttat tctgcctcaa aagtcaggag agtgccccaa aagtctaact
     3781 tatgaaagag ttatgaggca aagccggtat tatgtagaat ctttgattaa gtttctcatc
     3841 aaaacatctg ttgtgcttct tatgcttat
//
LOCUS       DATDZU010000078         2499 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_771289, whole genome shotgun sequence.
ACCESSION   DATDZU010000078 DATDZU010000000
VERSION     DATDZU010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771289"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VJJ79_02635"
     CDS             complement(<1..234)
                     /locus_tag="VJJ79_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22645.1"
                     /translation="MKIEVFIVFILLFGSLSLVSAQDDVCYSDSDCDPSYTCENNVCT
                     HPSAFGQAVAAAAQNKTNITQSIKTNIVPKVLDC"
     gene            345..494
                     /locus_tag="VJJ79_02640"
     CDS             345..494
                     /locus_tag="VJJ79_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22646.1"
                     /translation="MGTYDEIETECSNCKLSFKVKDMKVSPETNRLICVNCFTFPGSK
                     IKRIR"
     gene            553..2157
                     /gene="asnB"
                     /locus_tag="VJJ79_02645"
     CDS             553..2157
                     /gene="asnB"
                     /locus_tag="VJJ79_02645"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020212749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HLC22647.1"
                     /translation="MCGITAVIGKKTIDEVAVRSARMRHRGPDERDILLTNMGILSHE
                     RLSIMDLTTGKQPIQGTRNTYVIHNGEIYNYKKVYETDLKGTQRRTTSDSEVIVHLYE
                     KYGNDFCNRLDGMFAFVVFDVDKNKLIAARDPIGVKPLYYGKDKDGALWFASEMKTIC
                     DTCNDVAAFPPGHYYTPETGFVKYYSPRWEREPATDKDPRGLRELLEASVEKRLMSDV
                     PLGVLLSGGLDSSLISSIVCRKLRGTGQDLHSFSIGLSADAPDIQAARKVAKFLGTKH
                     HEVYFTVEEGIQALDKLIWHLESYDVTTIRASTPMYILSQYIRQQGIKVILSGEGADE
                     VFGGYLYFYNAPNDEAFQEETKRRVRLLSTADILRADKSTMAHGIELREPMLDLEFLE
                     KAIGLSPTLKRPLLPTATKEGRIEKFVLRKAFDDKDDPYLPENILWRQKEQFSDGVGY
                     NWMNSLVAHCEAKVSDNEFAQARERFPHNTPTTKEAFYIRKNFHRHFPQDAAAKTVRK
                     WVPKWQKSKDPSGRVNNVHQDAVEKK"
     gene            2191..>2499
                     /locus_tag="VJJ79_02650"
     CDS             2191..>2499
                     /locus_tag="VJJ79_02650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22648.1"
                     /translation="MDIIFMSHLQNIFFAIGLASLAACNQDTHKEQTNNSITPADTGT
                     DTATDTGIGNPWITTPAYTLYELAYYYDANGNLDEEAGKTSLEEYFNAYDSLVPLLVS
                     L"
BASE COUNT          821 a          545 c          532 g          601 t
ORIGIN      
        1 acaatcaaga actttgggaa caatatttgt tttaatactt tgcgttatat ttgttttatt
       61 ctgcgcggct gcagcaactg cctgtccgaa tgcagaggga tgtgtacaga cattattttc
      121 acacgtgtaa gatggatcgc agtcactatc gctgtaacag acatcatctt gcgcactaac
      181 tagagaaaga ctcccaaata aaagaataaa tactatgaac acctcaattt tcatagaact
      241 actccaaggc tttcttatat aaaaacgttt cgacactatc cctataaaca taaacaaaca
      301 acaacaacaa tccttttaaa ttcttagaaa ccagaacaaa gcaaatggga acatacgacg
      361 agatcgaaac agaatgctca aactgtaaat tatcttttaa agtcaaggac atgaaagtca
      421 gtccagagac gaatagattg atttgtgtga attgttttac attccccgga agcaagatca
      481 aacgcatccg ctgaaaaata cgttttattc ttaagataat aatttaaacc agacactatt
      541 tctcaaaaca ctatgtgtgg tattaccgca gttattggaa agaaaacaat agatgaagtt
      601 gcagtccgtt ctgcgcgcat gcgacaccgc ggtcctgacg aacgcgacat acttctgact
      661 aacatgggca tcctctctca tgaacgctta tcgattatgg accttaccac gggcaagcaa
      721 cctatccagg gaacacgaaa cacgtacgtc atccataatg gagaaattta caattacaaa
      781 aaagtgtatg agaccgacct aaaaggaaca caaagaagaa ccacgtcgga cagcgaagtg
      841 attgtccatt tgtacgaaaa atacggaaac gatttttgta accgcctcga cggcatgttt
      901 gcatttgttg tttttgatgt cgacaaaaat aagttaatcg ccgctcggga ccctatcggc
      961 gtcaagccgt tgtattatgg aaaagacaaa gatggagcac tgtggtttgc atcagaaatg
     1021 aaaacaatct gcgacacgtg caacgacgtt gccgcgtttc caccagggca ttattacact
     1081 cctgaaacag gttttgtcaa gtactattct cctcgatggg aacgtgaacc tgcaactgat
     1141 aaagatccga gggggttgcg agaactgttg gaagcgtccg tcgagaaacg gctcatgtca
     1201 gatgttcctc tcggcgtcct tctctctggc ggcctggact caagcctgat ttcatcgatt
     1261 gtctgtagaa aacttcgtgg aactggacaa gacctccatt cattttccat cgggttgtca
     1321 gcagatgcac cagacataca agcggcaagg aaagtagcga aatttcttgg aacaaagcat
     1381 cacgaagtat actttaccgt cgaagaagga attcaggcgc ttgacaaact tatctggcat
     1441 ttggaatctt acgacgtcac cacaatacgc gcaagtacgc cgatgtacat tctctcgcag
     1501 tacatacgac agcaaggaat caaagttatc ctttccggcg agggagcaga cgaggttttt
     1561 ggtggctacc tgtatttcta taacgcaccg aatgacgaag cgtttcaaga ggaaacaaaa
     1621 cgtcgggtac gattgttgtc gacggcagac atcttgcgcg cggacaaatc aacaatggcg
     1681 cacgggatag aactaaggga gcctatgtta gatttagaat ttttagagaa agcaattgga
     1741 ttgtcaccaa cgctcaagcg tccgcttctg ccaacggcaa cgaaagaagg aagaatagaa
     1801 aagtttgtgc tgagaaaagc attcgacgat aaagatgatc cgtacctgcc ggaaaatatt
     1861 ctctggcgac agaaggaaca attttctgac ggcgtcggct acaattggat gaacagtctt
     1921 gttgcgcact gtgaagcaaa agtaagtgac aacgagtttg cgcaggcgag agaacgtttc
     1981 ccccataaca cgccaacaac aaaggaagca ttctatatta gaaaaaattt tcaccggcac
     2041 ttccctcaag atgctgccgc gaaaactgtt cgcaaatggg tcccaaagtg gcagaaaagt
     2101 aaagacccgt caggaagagt aaacaatgtg catcaagatg ccgtggaaaa aaagtaatca
     2161 aacaacataa gtcttatata ttttgcttac atggatataa tctttatgag ccacttacaa
     2221 aatatattct ttgcgatagg tctcgcatca cttgctgcat gcaaccaaga cacgcacaaa
     2281 gaacaaacaa ataattctat aacgccagca gatactggta cagacacagc gacggatacg
     2341 ggaataggaa acccgtggat aacaacgcca gcatacacgc tttacgagct tgcgtattac
     2401 tatgatgcca atggaaacct cgacgaagaa gcaggaaaaa cgagccttga agaatatttt
     2461 aacgcatatg attcacttgt cccgctactt gtcagccta
//
LOCUS       DATDZU010000079         3124 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1675020, whole genome shotgun sequence.
ACCESSION   DATDZU010000079 DATDZU010000000
VERSION     DATDZU010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675020"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..144
                     /locus_tag="VJJ79_02655"
     CDS             1..144
                     /locus_tag="VJJ79_02655"
                     /inference="COORDINATES: protein motif:HMM:NF014076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22649.1"
                     /translation="MAETDSCSWYEFAAKNRVAHSTRKKLLIAIVDDENDVTYYSISW
                     TRP"
     gene            190..1155
                     /locus_tag="VJJ79_02660"
     CDS             190..1155
                     /locus_tag="VJJ79_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22650.1"
                     /translation="MGNRIVELKEQVYAYVNHHGPLLPAKVASEFRVTNMFVSALLSE
                     LVTTKKISLTKAKIGGSPLYYCKHQEAQLLGMLKSHLGQVQREALELLQEKKVLRDRD
                     CLPHERVALRELHDFAKPVKFVVHDMEEWFWIWYVLPEEEAKKMIGAMLEVIYPQVQE
                     SVPLQVQEVVVVEEAGSEEQPVVEEKQISLIATEQPVEQKPTLKKKKKKVKLDKKQTL
                     SFEEAVFAYFKNKEIKVMESRIIAKNKEINLVIHVSSTLGDLSYYVKARNKKRVTEGD
                     LLLAYTEGQNMKLPTVFLSAGTVTKKGQVYMEKNLRGMNVMTLEG"
     gene            1223..2296
                     /locus_tag="VJJ79_02665"
     CDS             1223..2296
                     /locus_tag="VJJ79_02665"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HLC22651.1"
                     /translation="MELYLFILGRDPELSKKELLAYLQTRNISCTIVESSDIALIIET
                     STLHVETMIKELGGIQKIVKVLPSVDNVYTGTENKVRYAISRYTDEEDTEIKVALKDY
                     FRREKIRAVIKKPQQGFPFLSPTEARGVVEIVLYKQYMGKTVAVFDPREHKTRDIQRP
                     VQRVPDAISIRLAKILINLAGAKSGETLLDPFCGIGTILQEAMLMGINTIGIDNDPSS
                     IEATKKNLEWIRNTYHPKGTYKVLKGNARALFSLVKKADCVVTEPDLGPYLRRLPTGA
                     EAQRIVRELQPLYTQMFQELQKLKPRTVVIIIPRFETRAKKTYLLSIESVLQRYGFTY
                     EEPIPYQSPTSKILRDIWILHKA"
     gene            2345..2533
                     /locus_tag="VJJ79_02670"
     CDS             2345..2533
                     /locus_tag="VJJ79_02670"
                     /inference="COORDINATES: protein motif:HMM:NF002242.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17e"
                     /protein_id="HLC22652.1"
                     /translation="MGRIKTTQIKRVGNKLVAQHRVNFKTSFDENKEILPQFVTINSK
                     KLRNVLAGYIARLMKREE"
     gene            2535..2834
                     /gene="albA"
                     /locus_tag="VJJ79_02675"
     CDS             2535..2834
                     /gene="albA"
                     /locus_tag="VJJ79_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011448499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA-binding protein AlbA"
                     /protein_id="HLC22653.1"
                     /translation="MDEFGEGNDNIIFVGTKPLMAYVNGVVTQFASLNTSEVIVRARG
                     KFIAKAVDVAEVAVRRFLIGEIENSSVVINSEEFENKEGKQVRVSTIEISLKKIM"
     gene            2880..>3124
                     /locus_tag="VJJ79_02680"
     CDS             2880..>3124
                     /locus_tag="VJJ79_02680"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HLC22654.1"
                     /translation="MVEVISQSLLFDIGVILIVASIVAYILRYFRQPLIPAYIIAGLI
                     LGPLGLKIIEDVDIIRNISEIGILFLLFIVGLEMDVK"
BASE COUNT         1007 a          602 c          723 g          792 t
ORIGIN      
        1 attgcagaga cagattcgtg ttcttggtat gaatttgcag caaagaaccg agtagcgcac
       61 tcaacgcgaa aaaagctgct tattgccatt gtggacgatg aaaatgatgt gacctattat
      121 tctattagct ggactcgccc gtagaccata aaaaataatt taaacgcatc taactattaa
      181 gatagtccta tgggaaacag gattgtcgag ctcaaggaac aggtctatgc gtacgtcaac
      241 catcatggtc cgctgctgcc ggcaaaggta gctagcgaat tccgtgtgac taatatgttc
      301 gtgtctgcac ttctctcaga acttgttacg actaagaaaa tatcgttgac aaaggcaaag
      361 ataggaggct cgccattgta ttattgtaag caccaagaag cgcaactttt agggatgtta
      421 aagtcgcatt tggggcaagt ccagcgcgaa gcattggaat tgttgcagga aaaaaaagtt
      481 cttcgtgaca gagattgcct accgcatgaa cgcgtggcac ttagggaact gcacgatttt
      541 gcgaagccgg tcaagtttgt cgttcatgat atggaagaat ggttctggat atggtacgtg
      601 ctccctgaag aagaggcaaa gaaaatgatt ggagcaatgt tggaagtgat atatccacag
      661 gtccaagaga gcgtgccgct acaagtgcaa gaagttgttg ttgtagagga agcaggaagt
      721 gaagaacaac ctgttgtcga agaaaaacaa atttccctta ttgcaacgga acagccagta
      781 gaacaaaagc ctacactaaa aaagaaaaag aaaaaagtaa agctagataa aaagcagaca
      841 ttgagtttcg aggaagccgt gtttgcgtac tttaagaaca aggaaattaa ggtaatggag
      901 agcaggatta ttgcaaagaa caaggaaatt aatttagtga ttcacgtttc atcaacgctc
      961 ggtgatctct cgtattatgt caaggcgcga aacaagaaac gggtaacaga aggagatttg
     1021 cttttggcgt atacagaggg gcaaaatatg aagctgccga cagtctttct ctctgcggga
     1081 actgtgacaa agaaagggca agtgtacatg gaaaagaatt tgcgcggcat gaacgtgatg
     1141 acattagaag gatgaaatta tttctatttt ttataattcc caataagaag cctttataaa
     1201 gacctccgta tccatttttt gcatggaatt atatcttttc atcctaggga gagacccaga
     1261 actttcaaag aaagagcttc tagcgtatct gcagacgaga aacatttcct gcactattgt
     1321 agagagctct gatattgccc tcatcataga aacttctaca ctccatgttg agacaatgat
     1381 caaggaactc ggcgggatac aaaagattgt caaagtcctt ccttctgtag acaacgttta
     1441 cacgggaact gagaacaagg ttcgctatgc aatttctcgc tatacagacg aagaggatac
     1501 ggagataaag gtggcactca aggattactt tcgccgggaa aagatacgcg ccgtcataaa
     1561 aaaaccgcag caaggatttc cttttctttc gccgacagaa gcacgtggtg ttgtagaaat
     1621 cgtgctctac aaacaatata tgggaaaaac agttgcagta tttgatcctc gggaacataa
     1681 aacaagggat atccaacgtc cagtgcagcg cgtaccagat gcaatttcaa ttcgtctcgc
     1741 aaaaatcctt attaatctcg ctggtgcgaa atctggcgaa actctccttg atccgttttg
     1801 tggcatcggc accattttgc aggaagcaat gcttatggga attaatacga ttggtatcga
     1861 caacgatccg tcgagcatcg aggcaactaa aaaaaatttg gaatggataa gaaacacata
     1921 tcatccgaag ggcacgtata aagtcctgaa agggaacgca cgagcgcttt tttcgctggt
     1981 aaaaaaggca gactgcgtcg tgacagagcc agaccttggt ccttatctcc gaaggttgcc
     2041 tacgggcgcg gaagcacagc ggattgtgag agaacttcag ccgttatata cacagatgtt
     2101 ccaggaacta caaaagctca agcctcggac agtggtgata attattcctc gttttgaaac
     2161 gcgagcaaaa aaaacctatt tactttccat agaatcagtg ctgcagaggt atgggttcac
     2221 gtatgaggag ccaattccat atcaaagtcc tacctcaaaa attttgagag acatatggat
     2281 acttcataag gcataaaagt cgcagaaaca tttataaacc ttcaataaat actcaccaaa
     2341 gacaatggga agaatcaaaa caacccagat aaaacgtgtg ggcaataagt tagtcgcaca
     2401 acatagggtg aactttaaaa catcatttga cgaaaacaaa gaaattctcc cacagtttgt
     2461 cacgattaat tccaaaaaac tccgaaatgt tcttgctgga tacatcgcta ggttgatgaa
     2521 gcgagaggaa taagatggac gaattcgggg aagggaacga taacattatt tttgttggaa
     2581 ccaagcctct tatggcttat gtaaatgggg tggtaacaca atttgcttct ttgaatactt
     2641 cagaagttat agtaagggct cgtggtaaat tcattgcaaa agcagtcgac gtcgccgaag
     2701 tagcggtgcg ccgttttctc atcggggaga tagagaacag cagcgtggtc atcaacagcg
     2761 aagagtttga gaacaaggaa gggaaacagg tgcgtgtctc taccattgaa atctctctga
     2821 agaaaattat gtaatatcta taaaaaattt tataaagagc attccctgta tagctgcgta
     2881 tggtagaggt gatctcgcag agtcttcttt ttgatatcgg cgtgatatta attgtcgcaa
     2941 gcatcgtcgc ctacatcttg cgctactttc gtcaacccct catcccagcg tatattatcg
     3001 ccggcttgat ccttggtccc ttgggattaa aaatcatcga ggacgttgac attattcgaa
     3061 acatatcaga gataggaatc ctcttcttac tctttatcgt cggtctggag atggatgtca
     3121 agaa
//
LOCUS       DATDZU010000080         2071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_83886, whole genome shotgun sequence.
ACCESSION   DATDZU010000080 DATDZU010000000
VERSION     DATDZU010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83886"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1600
                     /locus_tag="VJJ79_02685"
     CDS             <1..1600
                     /locus_tag="VJJ79_02685"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLC22655.1"
                     /translation="KRDFDFAKKYNLNIKTVITPKDNPTFQVIDAAYVDDGILVNSEE
                     FSQLDNKHAIQKISAFAEKKKFGKKTIQYKLRDWLFSRQRYWGTPIPIVYCEKCGVVP
                     VSYKNLPILLPEKVDFTKGGNPLATATTWVSTKCPSCKGAAKRETDTMGTFVDSSWYY
                     LRYCSPHNAKEPFDRKAIDYWMPVDQYVGGIEHAVGHLLYARFITKALRDLGMLNINE
                     PFTSLFNQGIVYKDGHKMSKSFGNVVYQTDISDKYGIDTARVFLMFVAAPDSDMEWSD
                     NGVEGSFRLLQKISRIAELPFAKPTEIDEHKRHSTIRQYTALLNQFKFNTAIIALMQY
                     AEYLTEHPTRNGYEDLLKILSPFAPHTAEELWHTIGNKTFVSVEKWPVADKKKILPEI
                     EQVLAFAETTKGDIHEIQKLAKLEKVSNVTLIIASDWKYGFMKKFKVLIEKERDIGKL
                     IKSLVDKEHGAEISKLVPMLVKNPGKVPLVVLTRKEEIEALESFRLSLEKEFCCCVSI
                     EHEEKSTEAKARNALPLKPAIILA"
     gene            1637..>2071
                     /locus_tag="VJJ79_02690"
     CDS             1637..>2071
                     /locus_tag="VJJ79_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22656.1"
                     /translation="MKISKDIPLAEITLRKYERPYDMSKRDLIRKICLSTGLLQPGDS
                     RDVIVDIFHTLLQEKREMTCEEIRDKVISQRKEAKFPLNGIAASNVRRQLKRLRDMYF
                     VEKVKNSYRINEQENVSILFTEKIEKFYLPAIVSRVKEYLDAL"
BASE COUNT          656 a          422 c          459 g          534 t
ORIGIN      
        1 caagcgagat tttgattttg caaaaaagta taacttgaac ataaagacag tcatcacgcc
       61 aaaagataat cctacatttc aagtcattga tgctgcgtat gttgatgatg gtattcttgt
      121 caactcagaa gaattttctc agttagacaa taagcacgca atacaaaaaa tatctgcatt
      181 cgcagagaag aaaaagtttg gcaaaaaaac tatccagtac aaacttcgcg actggctatt
      241 ttcacgacaa cggtactggg gaactcctat ccctatcgtc tattgcgaga agtgtggcgt
      301 cgttcctgtg tcctataaaa atcttcctat tctacttcca gaaaaagtag actttaccaa
      361 ggggggaaat ccgcttgcta ctgctactac ctgggttagc acaaagtgcc cttcatgcaa
      421 aggtgcggcg aagagagaaa cagacacaat gggaacgttc gtggattctt cgtggtacta
      481 cctcaggtat tgttcgccac acaatgcgaa agaacctttt gatagaaaag caattgacta
      541 ttggatgcct gtggaccaat atgttggtgg cattgaacat gccgtcgggc atttgctcta
      601 cgctcggttc attacaaaag cattacggga tcttggcatg cttaacatca acgaaccgtt
      661 tacctccctc tttaatcaag ggattgtgta caaggatggg cataagatga gcaagagctt
      721 cggcaacgtc gtgtaccaaa cagacatttc agacaaatac gggattgata ctgctcgtgt
      781 cttcctcatg tttgtcgcgg cgccagactc tgatatggaa tggtcagaca atggtgtaga
      841 aggaagtttc aggctgctgc agaaaatatc acgcattgca gaattaccat ttgcaaaacc
      901 aacagaaatt gacgaacata aaaggcacag cacaatccga caatatacag cgctgctcaa
      961 ccagttcaaa tttaatacag caattattgc attgatgcag tatgcagagt atcttacaga
     1021 acatccgaca aggaatgggt atgaagacct actgaagatc ctctcgccat ttgcgcccca
     1081 tactgctgaa gaactctggc atactattgg gaacaaaacg tttgtttctg tggaaaagtg
     1141 gcctgtcgca gataaaaaaa agatcctacc agaaattgag caagttctcg cgtttgcaga
     1201 aacgacaaag ggagatattc atgagattca gaaacttgca aagctggaga aagtatcgaa
     1261 tgtaacgctc attattgcct ctgactggaa gtatggattc atgaaaaaat ttaaggtgct
     1321 gatcgagaaa gaaagggata tcgggaaatt gatcaagtcc cttgttgaca aagagcatgg
     1381 cgcagaaatt tcaaagcttg tccctatgtt ggtaaaaaat cctgggaaag ttccgctcgt
     1441 tgtactgaca cggaaagaag aaatagaggc gcttgaatcg tttcgattat cgttagagaa
     1501 agagttttgt tgctgcgtct ccatagagca tgaagagaaa agcaccgagg caaaggcacg
     1561 gaacgcgtta ccgttgaaac ctgcaattat cctcgcataa gaaacttttt aaagtcttgc
     1621 cttccttttc tatatgatga aaatatccaa agatattccg cttgcagaga ttacgctacg
     1681 gaaatacgaa cggccttatg acatgtcgaa gcgtgacctc atcagaaaaa tctgtctctc
     1741 cacaggacta cttcaaccgg gggattcacg ggatgtgatt gttgacatct tccacaccct
     1801 cctccaagaa aaacgcgaga tgacttgcga ggaaatccgt gacaaagtta tctcccaaag
     1861 aaaagaggcc aagtttcctt tgaacggcat tgctgcgtcg aatgtgcggc ggcaattgaa
     1921 acggttgcgc gatatgtatt ttgttgaaaa ggtaaaaaat tcctaccgta tcaatgaaca
     1981 ggaaaatgtt tctatactct ttacggaaaa gattgaaaag ttctaccttc ctgccattgt
     2041 tagccgggtg aaagaatatt tggatgcttt a
//
LOCUS       DATDZU010000081         4645 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1520927, whole genome shotgun sequence.
ACCESSION   DATDZU010000081 DATDZU010000000
VERSION     DATDZU010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520927"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VJJ79_02695"
     CDS             complement(<1..406)
                     /locus_tag="VJJ79_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HLC22657.1"
                     /translation="MHNEQFLKELHAFMQSKGFVYGPFPEIYGGVSGFYAYGPLGKLL
                     KNRVEESVRHVFFSNGFREIECPTVIPDVVWEASGHLQTFTDKTIECSKCHSQFRCDK
                     LIEEKKEIDTASLTDKELLAAIKKEKITCPSCK"
     gene            complement(444..1031)
                     /locus_tag="VJJ79_02700"
     CDS             complement(444..1031)
                     /locus_tag="VJJ79_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22658.1"
                     /translation="MRRKKVLFVLGIVLVLIFLFLYVVFEKEINAGISLFEIDPEHQL
                     VLFPFSNRESETLAMDEIILASLYDAQHILQSTTFTEESDLYFIMANVSGLSVQQDGS
                     SWYDVDVQVLRHADNATVLSLEKNLGEKGKRVLNSKTISPYGLVNIPWTADSGNYTVA
                     ITFYDLYANISLERNATFTLVNSYEGISIPEPMLG"
     gene            complement(1101..1709)
                     /locus_tag="VJJ79_02705"
     CDS             complement(1101..1709)
                     /locus_tag="VJJ79_02705"
                     /inference="COORDINATES: protein motif:HMM:NF013983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0090560 -
                     2-(3-amino-3-carboxypropyl)histidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthamide synthesis protein"
                     /protein_id="HLC22659.1"
                     /translation="MADVVYIPAKVQNAGIDALMEKVNIPGTFAIVTTIQFLDEVNEL
                     KKKGYRILGQVLGCNITQAVKEQDFNAYLYIGTGKFHPLNLAFRQEKSVFILDPLTRE
                     FSQVTAEEKQRYEKRRKGMLLKYYAAEKIGIIVSVKSGQNQIRRAVRFKEKCGKNAYL
                     FLCENVQKLEDFPDIDCWVNTACVRIIEDDLNVPMVNIRDVE"
     gene            1786..2418
                     /locus_tag="VJJ79_02710"
     CDS             1786..2418
                     /locus_tag="VJJ79_02710"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLC22660.1"
                     /translation="MDISVILPAYNEEKYIEQTLQALKGRGEIIVVCNGCTDKTEDIA
                     KRYADNVLVLKEKGVSKARNAGAAAATHNKLIFLDADILVDGAVLETIAACSYTIGTS
                     KVKANSSRILDKIIMWGKSHTHSLGFCTGLIFCNRDIFEQAGKFEKYLSTKEDGRFLR
                     RARMLGRYGVVDAYVYNHMRRFHKKGYLTVMLFWVKEYLFPSKKDYESVR"
     gene            2415..3389
                     /gene="mnmH"
                     /locus_tag="VJJ79_02715"
     CDS             2415..3389
                     /gene="mnmH"
                     /locus_tag="VJJ79_02715"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF008750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HLC22661.1"
                     /translation="MKIDEIYGDAYMFVDVRSPKEFAEDCIPNAINIPLFSNEERAIV
                     GTIYKQQSREEAMDEGIKIIAEKLQVMMDEYKNLAEKKLCIYCWRGGMRSGSVVGLLK
                     ALKYDVVQLDGGYKEYRRYVREQLEKISMPPFIVLYGLTGSGKTEMLQQLSNNLDLEG
                     LAQHRGSIFGDIGLQPRSQKMFESLFLQRLLVLQKEKFIFTEGESRRIGRVVLPERLW
                     KYMQQGKKVKVICPVSERVERLYKEYCATPDNALLIKKIGYIEKHLGKNNAEMLIKLL
                     YEGKIKDVIEKILVQYYDRLYSHTVDTKEYIATVRNVEELQKLYLKNI"
     gene            3461..>4645
                     /locus_tag="VJJ79_02720"
     CDS             3461..>4645
                     /locus_tag="VJJ79_02720"
                     /inference="COORDINATES: protein motif:HMM:NF014044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLC22662.1"
                     /translation="MILGKIVGKSSTKQFTFHVDGDAKKFEYVQVMHSSGIFVLAQIE
                     EIEKDPEKTLAFCNIIGYRDETKDLQRLTYPLDPGVEVLHADDDFIRDVLCLEKKKNA
                     AYIGFLDGRDKLKVFLDLDTVLTKHVSVLAKSGSGKSYCTGVLLEELLLKKVPIVVID
                     PHGEYSSLKYPNPKDKERMIQFGTTPKGFLQQILEFSPNMEVNTEAKPLTLNSRGISS
                     EELVHLLPTKLSSSQLGTIYAALKNLGGRVDFDDLLFELEATEESSSKWTLIHLFQYV
                     KNLHIFSDSPTRMNELVQPGKMSIINLKGVEQEVQEIVVYKLVHDLFLERKKNMVPPF
                     FLVIEECHNFVPERNFGEAKSSAIIRQVAAEGRKFGLGLCLITQRPSRVEKSALSQTS
                     TQI"
BASE COUNT         1391 a          944 c          985 g         1325 t
ORIGIN      
        1 ccttacagga aggacaggtt attttttctt tctttatcgc tgcaagcagt tctttgtcag
       61 tcaaggacgc cgtgtcaatt tctttttttt cttctatgag tttatcgcag cggaactgag
      121 aatggcactt gctgcactcg atagttttat ctgtaaatgt ttgtaagtga ccagaagctt
      181 cccatacgac gtctggaatg actgttgggc attcaatttc tctaaatccg ttgctgaaaa
      241 acacatggcg gacagattct tctacgcgat tttttaacaa cttccctaac ggaccgtacg
      301 cataaaatcc tgagacgccg ccataaattt caggaaatgg accgtagaca aaccctttgc
      361 tctgcatgaa tgcatgaagc tctttcaaga actgttcgtt gtgcatgggt tgtggtacat
      421 tatacttaag tttttatagt tttctacccg agcattggct cagggattga aataccctca
      481 taagaattta ccaaggtaaa cgttgcattt ctttccagag atatatttgc gtagaggtcg
      541 taaaacgtaa ttgcaactgt ataattgccg ctgtccgcag tccacggaat attcactaag
      601 ccatacgggg aaatggtttt tgaattcagg acacgctttc ctttttctcc caagtttttc
      661 tcaagcgaaa gcacagttgc attatcggca tgacgaagaa cttggacgtc cacatcatac
      721 caacttgatc cgtcctgttg cacagaaaga ccactgacat tcgccatgat gaaatataaa
      781 tctgactctt ccgtaaatgt cgtgctttgt agaatatgct gcgcatcgta caggcttgca
      841 aggattattt cgtccatggc aagcgtttca ctttctctat tggaaaatgg aaagagaacc
      901 agctggtgtt ccgggtcaat ctcaaacaat gaaatgcctg cgttgatttc tttctcaaag
      961 acaacataca ggaaaagaaa aataagtact aaaactatac ccagaacaaa gagaactttt
     1021 ttccttctca caaaaagagc atatattttc tttcttaaat gtttttctct atcttcaact
     1081 cacagtaaaa atgttttgtt tcattctaca tcacggatat taaccattgg gacattcaaa
     1141 tcatcctcga taattctgac gcaggccgtg ttcacccagc agtcaatatc tggaaagtct
     1201 tctaacttct gcacgttttc acagagaaag aggtacgcat tctttccaca cttttctttg
     1261 aagcgtactg cgcgccggat ttggttttga ccagatttta ctgaaacgat aatgccaatc
     1321 ttttctgcag catagtactt cagcaacatt ccttttcttc ttttctcata tcgctgtttt
     1381 tcttcggcag tcacctgcga gaattctctc gtcaagggat ctaatataaa gacggacttt
     1441 tcctgacgga atgctaaatt taatggatga aattttcccg tgccgatata caagtatgcg
     1501 ttaaaatctt gttccttgac tgcttgagta atattgcatc cgagaacttg gcctaggata
     1561 cgatagcctt ttttcttgag ctcattcacc tcgtcaagaa actggatcgt ggtaactatt
     1621 gcaaatgttc ctggaatatt cactttttcc atcagtgcgt cgattcctgc gttctgtacc
     1681 tttgctggaa tgtataccac gtcagccatg agattttgga agagctggtg tttttaaatg
     1741 ttccgacaga tacgttttta aagttcacgt tagtttctga gagacatgga tatttccgtt
     1801 attctcccgg catacaacga agagaagtac atcgaacaaa cactgcaggc gctcaaaggt
     1861 agaggagaaa ttattgttgt ctgtaacggc tgtactgata aaaccgaaga tattgcgaaa
     1921 agatatgcag ataatgtgct cgtgttaaaa gaaaaaggcg tatcaaaagc acggaatgct
     1981 ggcgctgctg cggcaaccca taataaacta atttttctcg acgctgatat tcttgtagat
     2041 ggtgctgtac ttgaaaccat tgcagcatgt tcgtacacga ttggcacgtc aaaagttaag
     2101 gcaaactctt cgcgtattct cgacaagatc ataatgtggg gaaaatcaca cacacatagt
     2161 ttaggtttct gcacggggct tattttttgt aacagagata tttttgaaca agctggcaaa
     2221 tttgaaaaat atctctcgac gaaagaagat ggccgatttc tacgccgagc acgaatgctt
     2281 ggacgatacg gcgtcgttga tgcgtatgtc tataaccata tgcgacgctt ccacaaaaaa
     2341 ggatacctta ctgtgatgct cttctgggtc aaggaatatc tctttccgtc aaaaaaagac
     2401 tatgagagtg tccgatgaaa atcgacgaga tctatggaga tgcgtacatg tttgtcgacg
     2461 ttcgctcgcc gaaagaattt gcagaagatt gtattcctaa cgcaataaat attcctcttt
     2521 tctccaatga agaacgtgcc attgtcggaa ccatctacaa gcaacaaagc cgagaagaag
     2581 caatggatga aggaataaaa ataatcgcgg aaaagttgca ggtgatgatg gacgaataca
     2641 aaaacctcgc tgaaaaaaaa ctatgcattt attgctggcg cggaggcatg cgttctggct
     2701 ctgttgttgg attattgaaa gcattgaaat atgacgttgt tcagttggat ggtgggtaca
     2761 aagagtaccg acggtatgtc cgcgaacagt tagagaaaat ttctatgcct ccctttattg
     2821 ttctctatgg attaacggga tctggaaaga cagagatgct ccaacaactt tcaaataatt
     2881 tagatctcga aggacttgca cagcaccgag gcagtatctt tggtgacatt ggattacaac
     2941 cacgatccca aaaaatgttt gaaagccttt tcctgcaacg gttacttgtg ttacaaaaag
     3001 agaaatttat ttttacagag ggagaaagcc gacggattgg aagagtcgta cttcctgaac
     3061 gattatggaa atatatgcag caaggaaaga aagtaaaagt tatctgtcct gtgtcggaac
     3121 gtgtggaacg tctctacaag gagtactgtg caacaccaga taatgcgtta ctgatcaaaa
     3181 aaataggata cattgaaaag catcttggaa aaaataatgc ggagatgtta attaagcttc
     3241 tctatgaagg aaagattaaa gacgtgatcg aaaaaattct tgtgcagtac tatgaccggc
     3301 tgtacagtca tacggtcgat accaaagaat acatcgcgac ggtacggaat gttgaagaat
     3361 tgcagaagtt atacttgaaa aatatctgag agcctgtaca aatagtttcc tcttctggat
     3421 taccactatt ttaataaact attatttggt gaaggtctct atgattctgg gaaaaattgt
     3481 tggaaaaagc agcactaaac agtttacttt tcacgtcgat ggcgatgcga aaaagtttga
     3541 gtatgtacag gtgatgcact cttctggcat ttttgtcctt gcacagattg aagagattga
     3601 gaaagatcct gaaaagacgc ttgcgttctg taatattatt ggctatcgtg atgaaacaaa
     3661 agacctgcag cggcttacct atcctctcga tcctggcgtt gaagtgctgc acgccgatga
     3721 cgattttatc cgtgacgtgc tctgccttga gaaaaagaaa aatgcggcgt acatagggtt
     3781 tcttgatggg agagataaac tcaaagtctt cctcgacctt gacacagtgc tcacaaaaca
     3841 tgtctccgtg cttgcaaagt caggctctgg aaaatcatac tgtacaggcg tgctgttgga
     3901 agaactctta ttgaagaaag tacctatcgt tgttatcgat ccacacggtg aatactcctc
     3961 gctaaaatat cccaacccaa aagataaaga acgcatgatc cagtttggca cgacgcctaa
     4021 gggattcttg caacaaattt tagaattttc accgaatatg gaggtcaata cagaagcaaa
     4081 gccattgacg ctcaacagcc gagggatttc atcagaagaa ctggtgcacc ttctcccgac
     4141 gaaactttct tcgtcacaac tcgggacaat ctatgcggct ctgaaaaatc ttggcggacg
     4201 agtagacttt gacgacttat tgtttgagct cgaagcgaca gaagaaagca gcagcaaatg
     4261 gacgctgatt caccttttcc agtacgttaa aaatttacac attttctctg acagcccgac
     4321 gcgaatgaac gaactagtcc agcctgggaa aatgagtatt atcaatctca agggtgtcga
     4381 acaagaagta caggaaattg tcgtttataa actcgtacat gatttgttcc tggaacgaaa
     4441 aaaaaatatg gtaccgccgt tctttctcgt gattgaagag tgccataact ttgttcctga
     4501 aagaaacttt ggggaagcaa aatcctctgc catcatcaga caagttgccg ctgagggacg
     4561 aaaatttggt ctaggcctct gccttataac acagcgtcca agtcgcgtag aaaagagcgc
     4621 gctcagccaa acgtcgacgc agatc
//
LOCUS       DATDZU010000082         6390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_276967, whole genome shotgun sequence.
ACCESSION   DATDZU010000082 DATDZU010000000
VERSION     DATDZU010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6390
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276967"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VJJ79_02725"
     CDS             <1..716
                     /locus_tag="VJJ79_02725"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22663.1"
                     /translation="ERGCPFLCKFCAIPVFYNEKLQFRSLENLTHIIDQGLAINKVNK
                     VVIYAPSFVHPQRKEILRYLLKKKVRVSVPSVKAEHIDIETLQLIKACGQESITIAPE
                     CGQRLRFALNKKVPDQAYFDFVCRCNDAEIQKLKLYLMIGLPGMTQGDLEELVTFVKE
                     MQHAFHGTLYLSLNTFVPKPGTPLENFYFDKKTAEKQALFLRKNLKGLRMKITSFSSS
                     YKEGTLLRKQITSSSKFLT"
     gene            complement(713..1279)
                     /locus_tag="VJJ79_02730"
     CDS             complement(713..1279)
                     /locus_tag="VJJ79_02730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22664.1"
                     /translation="MLSRLELRRQLMHMGFGIFLVMMLYLGIFTLVHLIAIFLCGILL
                     SQLCARYRVPIASRVMDNFERKEFRKTFPGKGPILFMLGSIIVVFIFPLKIALASMMI
                     LSLGDAVSHIFGKLLSRRTYKYLKSVEGTLLAILFSFIGALLFVNVAAALASSVLSML
                     FEDLKTGIDDNVWIPLIAACVMVLISLF"
     gene            complement(1337..1654)
                     /locus_tag="VJJ79_02735"
     CDS             complement(1337..1654)
                     /locus_tag="VJJ79_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22665.1"
                     /translation="MKQTTMAVGLAALVSGCTYDDVTRVGGCEVGNLSLEILHHQKGP
                     FEKEYLELEISNTETGEYLGVIGPFDRWSIDKWSDGTSVSCNYGKSLVINGDFVGITS
                     KKE"
     gene            complement(1709..2236)
                     /locus_tag="VJJ79_02740"
     CDS             complement(1709..2236)
                     /locus_tag="VJJ79_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22666.1"
                     /translation="MEKQVLQAFQGSDAWKKHQAQHKRTKLGDAKLFVPGEAVLGEQK
                     DVLRERLGLQEIKEEAIPEEQPVLQKKERQVAYKTEKEATSETYKPATSSGAADTYQG
                     AHDPNRPGYWATCNCGAEFHLEQDKKGNIGVKTYTAESALKTEGAYSAQSATTTYTSP
                     SAEKNGYNSSNPAYA"
     gene            2381..3064
                     /locus_tag="VJJ79_02745"
     CDS             2381..3064
                     /locus_tag="VJJ79_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22667.1"
                     /translation="MRYKQFLTTIDGEEKRLGILGECHLYTTQESRFAEEIVLQFENF
                     AVEGTSKASVLGVIADISMLPAYICLSGIPERSPDNATALQFARLYQLMTFELEDQYR
                     LTSLRAGAFVICGVTDIVESPFAYFWLKKNGDPYTPGTKAYAKLKEQKEKPTLLSRIA
                     DFATDVEGRDIKMALRSFEVLKTVPKNLLVSVGDHHLDGIVSHWHRMLPLEETRSVSE
                     EEVAYKLCT"
     gene            3103..3627
                     /locus_tag="VJJ79_02750"
     CDS             3103..3627
                     /locus_tag="VJJ79_02750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22668.1"
                     /translation="MASATTITSVPAKIQIVKDGYKIKSKGVFNMEDLYLELYLWFQH
                     HGYAVKELEYRVVQRPGGPNHIEILWHGTKIVDDYTSYIITLNVGADLSDVEVTLDGG
                     KKVNRQKGMLEFRSGARIERKTDVWEGKLLGNMQAHVYDMLIQDRIKAQKAELFMEAH
                     KLYDELKAFMMLYR"
     gene            3624..4055
                     /locus_tag="VJJ79_02755"
     CDS             3624..4055
                     /locus_tag="VJJ79_02755"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:NF013421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HLC22669.1"
                     /translation="MKKYIFLSVMLLLLDQGSKWFFQERTVAISFLSLHPVTNTGALF
                     GLFQGWNTLFLVISFLVLGFVWMSLRDKPIVFSLFNAGIVGNMIDRIVFGHVRDFIDV
                     GFWPVFNLADSYLTIGVLLLLLSFVRKEVGKKHIPSRRTHF"
     gene            4097..5596
                     /locus_tag="VJJ79_02760"
     CDS             4097..5596
                     /locus_tag="VJJ79_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22670.1"
                     /translation="MAKEGFPALFSSPEEKEKTEEEKWKEKEQANPFIQKKSLDPENG
                     VKALKISIDSIGDTVEKHYFFFQKFLTKHPTSPFGLRAEEIIKLKDVFDASVSSAFHG
                     QIGSKVSAIQQQISTYLTQIGQLTKTIFPMVREIRMMDERLEFYTASLNKDKGDEEAR
                     QNEVALKSIWVEVVEQGMQNPNSVYSMATKLGFVTLPDLFFGINPAGKTSEEQKKNLT
                     KILDALQKEKSFSLKVRNALEKKLVQYYTWKDKTWNEMHHTRKFRIKALKQHYNVIRL
                     YVSWLKPYLTALKALQLRGDITAPELVAAFETSKLELELLAVMKKGEKFRSCVLVRIT
                     YVTRPELTYGQGGGKQVTHVGEVTISIEPYVATQEEIEFYKTYTERSLFQSMSGVESA
                     TFVTDVEAILTSLGEDVQAYLKEAEEGKKEEKKENKEQREGILDPFAALGKSFKMFFP
                     QFKKKERKGLTKKEMIAGEKEKKEMEKDAAAKAWVLYEVFKKSNGMLTW"
     gene            5659..>6390
                     /locus_tag="VJJ79_02765"
     CDS             5659..>6390
                     /locus_tag="VJJ79_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22671.1"
                     /translation="MVHFGGSSYLHAMDREKADELNLSTRSLGTSARMGDVLQSLKGE
                     LSSGATHVELVFSGKGKGSLQGQNVNPEMFDKVKREEIRQLAKLNDTSLSTHASVAVS
                     GVAGFAENKFSDRAQKEALIEIKRTIDFAAATAEGGAVVVHTSEFPREVKDKRFKLGP
                     EGQEVIYLADKNSGQIISVNKSQKLLLPQWERDKNGNYVDTNGKPIHEFHNFEDRVPI
                     VDKSDNVQFQEVTFEDVKQDVALWNK"
BASE COUNT         1943 a         1321 c         1422 g         1704 t
ORIGIN      
        1 tcgaacgcgg ttgtccgttc ctctgcaagt tctgtgccat cccagtgttc tacaacgaaa
       61 aactacagtt ccgaagcctt gaaaatctta cccacattat cgaccaggga cttgcaatca
      121 acaaggtgaa caaggtagtg atttacgctc cgtcattcgt gcacccgcaa cgaaaagaaa
      181 ttttgcgtta cctacttaag aaaaaggtgc gcgtgagcgt gccgtcggtt aaagcagaac
      241 acatagacat agaaacatta cagttgatta aagcctgcgg acaagagtcc attaccatcg
      301 cacctgaatg cggacaacga ttgcgctttg cactgaacaa aaaagttcct gaccaagcgt
      361 actttgattt tgtgtgccga tgcaatgacg cagagattca aaaattaaaa ttatacctga
      421 tgattggttt gccaggcatg acacagggag accttgaaga actggtgacg tttgttaaag
      481 aaatgcaaca tgcgtttcat ggaacgctgt acctctctct caatacgttt gtcccgaaac
      541 caggaactcc cttagaaaat ttttattttg acaagaagac tgcagaaaaa caggcgctgt
      601 tcctcagaaa aaatctgaaa ggtctccgaa tgaaaatcac atcattctct tcatcctaca
      661 aggaagggac gttactgaga aaacaaatta cctcttcttc aaaatttctc acttaaaaaa
      721 gagatatcag caccatcacg catgcagcaa tcagcgggat ccatacatta tcatctatcc
      781 ctgtcttcag gtcttcaaac agcattgaaa ggacactgct tgcaagcgca gctgcgacgt
      841 tgacaaacaa gagtgcgccg ataaaagaaa aaagaatcgc caatagcgtg ccttcgacag
      901 acttcaagta cttgtacgtt ctccgcgaca acaacttgcc gaaaatatgc gagactgcgt
      961 cacctaacga taaaatcatc atcgatgcaa gcgcaatctt caatggaaaa atgaagacaa
     1021 caataataga accgagcatg aacaagatgg gacctttccc tggaaacgtt ttgcgaaact
     1081 ctttgcgctc gaaattatcc atgacccgcg atgctatggg cacacggtag cgcgcacaca
     1141 actgcgagag caagatgcca cagagaaaga tcgcaataag atgcaccaac gtaaaaatgc
     1201 caagatacaa catcatcaca agaaaaatgc caaagcccat atgcatgagc tggcgccgaa
     1261 gttctaaccg cgaaagcatt gaagactaaa agaacgagtg ttttaaaata cttgtggagc
     1321 ttataaaata aaaaaattat tctttttttg atgttattcc aacaaaatcc ccatttataa
     1381 ctagtgattt gccgtagtta caagaaacgg acgttccatc gctccattta tcaatgctcc
     1441 acctatcaaa aggtcctatt acaccaagat attcacctgt ttccgtatta gaaatttcta
     1501 gttctaagta ttctttctcg aaaggtccct tttgatgatg caatatttct aggcttagat
     1561 ttcctacttc acaaccacca actcttgtca catcatcata cgtgcatccg cttaccagtg
     1621 ctgccaatcc tactgccatt gttgtttgtt tcatatctat cactcagaaa atttagggaa
     1681 aatagggagt ttaaaagaat tgcgtatctc acgcgtatgc aggattcgaa gaattgtatc
     1741 catttttttc tgctgacgga gacgtgtacg ttgttgtcgc tgattgcgcg ctatatgctc
     1801 cttcggtttt caaggcactt tctgccgtgt acgttttcac gcctatgttt cctttcttgt
     1861 cctgctcgag atgaaactct gcgccacagt tgcatgttgc ccagtagcct ggacgatttg
     1921 gatcgtgcgc accttggtag gtgtctgctg caccagaaga cgttgccggt ttgtacgtct
     1981 cgcttgttgc ttctttctca gttttgtacg ccacttgcct ctctttcttt tgtagcactg
     2041 gttgttcttc aggtattgct tcttctttta tttcctgtaa tcccaaacgt tcacggagca
     2101 catctttttg ttcgcctaac actgcttctc cagggacgaa gagctttgcg tctcccaatt
     2161 tcgtccgctt atgctgtgct tgatgctttt tccatgcatc agaaccttgg aacgcctgca
     2221 gtacttgttt ctccatttcc ttcggagaca gcgttttttc tatgtctgat agttgtgcga
     2281 aaataaccat tctttccttt aagacatggc taaggaacgc ttataaaggt ttctccatgg
     2341 ctgaggtaga cttaaaaata gcaaattatt tatttttggt atgcggtaca aacaatttct
     2401 tactactatt gatggagaag aaaaacgatt aggtattctt ggagaatgtc atctctatac
     2461 tacacaagag agcagatttg cagaagagat tgtactacaa tttgaaaact ttgccgttga
     2521 ggggacatca aaagcaagtg ttcttggtgt tatcgcagat atctctatgc tgcccgccta
     2581 tatttgtctc tctggcatac ctgaaaggtc gccagataat gcaactgctt tgcaatttgc
     2641 tcgcctttat caattaatga cttttgagct cgaagatcaa taccgtctca cctctcttcg
     2701 cgcaggtgca tttgttatct gtggagttac tgacatcgtt gaatcaccat ttgcatactt
     2761 ctggctcaaa aagaacggag atccttatac acctggaaca aaagcgtatg cgaaactaaa
     2821 agaacaaaaa gaaaaaccta cacttctttc tcgaatagca gactttgcaa ctgatgtgga
     2881 aggaagagat attaaaatgg cgctacgatc ctttgaagtc ctaaaaaccg ttccaaagaa
     2941 tttgctcgtg tctgttggtg atcatcacct tgatggcatc gtgagccatt ggcacagaat
     3001 gctccctcta gaagaaacac gttctgtctc tgaagaagag gttgcataca agctttgcac
     3061 ataaaaacct ttattaactt ctcttgcccc attacaaata acatggcaag tgctacaact
     3121 attaccagtg ttccagcaaa aatccagatt gtgaaagatg gatacaaaat taaatccaag
     3181 ggcgttttta atatggaaga tttgtacttg gagctctacc tctggttcca gcatcacgga
     3241 tacgcagtaa aagaactaga gtaccgtgtt gtccaacgcc ccggcggtcc aaatcatatt
     3301 gaaattctct ggcatgggac aaaaatagtg gatgattaca cgagttatat catcacgctg
     3361 aatgttggtg cagacctgag tgacgttgaa gtgacactgg atggcggaaa gaaagtcaac
     3421 cggcagaaag gaatgcttga gtttcgcagc ggggcgcgta ttgaaagaaa gacggatgtc
     3481 tgggaaggga aattgctcgg aaatatgcag gcgcacgtgt atgatatgct catccaggac
     3541 agaataaagg cgcagaaggc agaactgttc atggaagcac ataagctgta cgatgaactg
     3601 aaagcgttca tgatgctcta cagatgaaaa aatatatttt tctttctgtt atgttgctgc
     3661 tgctagacca aggaagcaaa tggttttttc aggagagaac agttgcgatt tcttttcttt
     3721 cattgcatcc tgtgactaac acaggtgcgt tgtttggatt gtttcaagga tggaacactt
     3781 tgtttctggt tatttcattt cttgtgctag gatttgtgtg gatgtcatta cgtgacaagc
     3841 cgattgtatt cagtttgttt aatgctggga ttgtaggaaa catgattgat agaattgttt
     3901 tcggacacgt gcgggatttt attgacgtgg gattctggcc cgtgtttaac cttgctgaca
     3961 gttatttaac tattggcgtg ctgcttcttt tgctatcttt tgtgcgtaaa gaagttggaa
     4021 aaaagcatat tccttctaga agaacacact tctgagtaag aagttttata aatttctcag
     4081 cctttagaac atacgtatgg caaaagaagg gtttccggca ttgttctctt cccctgaaga
     4141 aaaagaaaaa actgaagaag aaaagtggaa agaaaaagaa caggccaacc cattcatcca
     4201 gaagaaatcc ctcgacccgg aaaacggcgt caaggcactt aaaatttcta ttgacagcat
     4261 tggcgatact gttgagaaac attatttctt ttttcaaaaa ttcctgacaa aacatcctac
     4321 gtcgccattc ggacttagag cagaagaaat tatcaagctg aaagatgtct ttgatgcgtc
     4381 cgtcagcagc gcgttccatg ggcagatagg cagcaaagtt agtgctatcc agcagcagat
     4441 ttcaacgtac ctgacgcaga tcgggcaact cacaaaaact atttttccta tggtcagaga
     4501 aatcaggatg atggacgaac gcttggaatt ttacacggcc agcctaaaca aggataaagg
     4561 cgacgaagaa gcacggcaga acgaagtggc actgaagtcc atctgggttg aagtagtcga
     4621 acagggcatg caaaacccta actccgtgta cagcatggca accaagcttg gctttgtgac
     4681 actgcctgac cttttctttg gcattaaccc tgcaggaaaa acctcggaag agcagaagaa
     4741 aaatctgacg aagattcttg acgcgctgca gaaagaaaag tcgtttagcc tgaaagtacg
     4801 aaacgcgctg gagaaaaaac tagtgcaata ttatacgtgg aaagataaaa cgtggaacga
     4861 aatgcatcac actcgaaagt tcaggattaa agcgctgaag cagcattata acgttatccg
     4921 gttgtatgtt tcctggctca agccatacct cactgcactg aaagcgctgc aattgcgagg
     4981 cgatatcact gcgccagagc tggtcgctgc gtttgaaaca agcaagctag aactcgagct
     5041 ccttgccgtg atgaaaaaag gggagaaatt tcgatcatgt gtgctggtgc gcattactta
     5101 tgtgacgcga ccggagctga cctatggtca aggcggggga aagcaagtca cgcatgtggg
     5161 agaagtcaca atcagcatcg aaccgtacgt tgcgacgcag gaagagattg aattctataa
     5221 aacttacact gaacgtagtt tattccagtc aatgtcaggc gtcgaatctg ccacgtttgt
     5281 cacggacgtt gaagcaatcc taacaagtct cggggaagac gtgcaggcgt atcttaagga
     5341 agcagaggaa ggaaaaaaag aagagaaaaa ggaaaataaa gaacaacgcg agggaatcct
     5401 cgatccgttc gctgcgcttg gaaaatcgtt taaaatgttt tttcctcagt tcaagaaaaa
     5461 agaaaggaaa gggctgacta agaaagaaat gattgcgggc gaaaaagaaa aaaaagagat
     5521 ggagaaagac gctgctgcaa aagcgtgggt actgtacgaa gtgttcaaga aatctaatgg
     5581 aatgttgaca tggtaattgt tgttttctaa tatacctaat agaaatctta ataaactttc
     5641 aggctcttta ttctctatat ggtgcacttt ggaggttcta gttacctgca tgcgatggat
     5701 cgcgagaagg cggatgagtt aaacctctct acacgtagcc ttggtaccag cgcgcggatg
     5761 ggagatgttc ttcaaagctt gaaaggcgaa ctttcttcag gtgcgacgca tgtggagctg
     5821 gtcttttctg gaaaaggaaa aggatcgctt cagggccaaa atgtcaaccc ggaaatgttt
     5881 gacaaagtca aaagagaaga aatcaggcag cttgcaaaat tgaatgacac atcgttaagc
     5941 acgcacgcgt ctgttgcagt ctctggcgtg gccgggtttg cagagaataa gttttctgac
     6001 agagcacaaa aagaggcatt gattgaaatt aaacgaacaa ttgattttgc tgcggcaact
     6061 gcagagggtg gcgctgtcgt ggtacatacc agcgagtttc cacgggaagt caaagacaaa
     6121 cggttcaagc tggggccaga agggcaggaa gtgatctatc tcgcagacaa aaattctgga
     6181 caaatcatta gcgtgaacaa atcacaaaaa ctacttcttc cacaatggga aagagacaag
     6241 aatggaaact atgttgatac caatggaaag ccgattcatg aatttcataa ttttgaagat
     6301 cgcgttccaa ttgttgataa aagtgataac gtacagtttc aggaagttac ttttgaggat
     6361 gtgaaacaag atgttgctct ttggaacaaa
//
LOCUS       DATDZU010000083         3453 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1798759, whole genome shotgun sequence.
ACCESSION   DATDZU010000083 DATDZU010000000
VERSION     DATDZU010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798759"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VJJ79_02770"
     CDS             <1..353
                     /locus_tag="VJJ79_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22672.1"
                     /translation="NEKVLEYAISGNIGEFYRDEIALREEFEYPPFSVLIKLSVMGTM
                     ARVQREMDILQAEFEDNEIHIYPAGLIAPRGREIRHALLRISQKEWPDLAIVEKLRKL
                     PPHIAIDIDPENLL"
     gene            776..1327
                     /gene="def"
                     /locus_tag="VJJ79_02775"
     CDS             776..1327
                     /gene="def"
                     /locus_tag="VJJ79_02775"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLC22673.1"
                     /translation="MVTIVQKGADMLRQIAVEIPIADIQSKKIKNIIKEMHVGIASRA
                     DAVAIAAPQLGYSLRMFMVSKRVFITEEREIDADDVVYINPTIIKRSRKKNEADEGCL
                     SVEQWYGKTVRSEKVTIRAYNEKGSLLERGASGLLAQVFQHEVDHLNGILFTDHATEL
                     VKLPKDKEKEEKIVDTNSKPKKK"
     gene            1324..2187
                     /gene="fmt"
                     /locus_tag="VJJ79_02780"
     CDS             1324..2187
                     /gene="fmt"
                     /locus_tag="VJJ79_02780"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HLC22674.1"
                     /translation="MKKHDVRFAFFGTSIFSVMVLDELKKAGFTPALIVTTADKPQGR
                     KLIISASPVKIWAQQEKIDVIQPDQLTPEVLSDLGNSEWDLFIVASYGKILPGALLHI
                     PHFGSLNVHPSLLPKYRGASPIQSQILADDRKTGVTIMLMDEALDHGPIIAQARIEID
                     EADWPPKGSELEEMLATLGGSFLAETIPSWIDGALTKETQEEEKATFTKKITKEDGEL
                     DMNNGDARQNFLKIQAFDEWPVAYFFVEKKGKKIRVKITSASYRNGVLTLERVIPEGK
                     KEMLYSDFLRS"
     gene            complement(2255..2662)
                     /gene="raiA"
                     /locus_tag="VJJ79_02785"
     CDS             complement(2255..2662)
                     /gene="raiA"
                     /locus_tag="VJJ79_02785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HLC22675.1"
                     /translation="MNINIKGTNLELTADVREYLTKRLHAFEKFMDKDDTSVVCDVEL
                     ARSTHHQQGNVFRAEVTMHTRRGVNRAEAEGETIEEAIDGVKSTILRELRREKRKEGH
                     LLRRGGAKLKGFTQSLSERGVQLRDFVIRRKKK"
     gene            complement(2680..2904)
                     /locus_tag="VJJ79_02790"
     CDS             complement(2680..2904)
                     /locus_tag="VJJ79_02790"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HLC22676.1"
                     /translation="MYVRVHVLPGSRRESFLKENHNTFIACVKEEAKRNQANKRVREL
                     LGSYYNLPLGHVALVSGHRSPHKVFNIEEA"
     gene            complement(2906..3157)
                     /locus_tag="VJJ79_02795"
     CDS             complement(2906..3157)
                     /locus_tag="VJJ79_02795"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HLC22677.1"
                     /translation="MITLYVKDGCPYCAAVLHKVDEIALVVNLKNIKDEAIAEELIQK
                     GGKRQVPYMIDEDQNVSMYESADIVEYLDREYKKADDTI"
     gene            3328..3400
                     /locus_tag="VJJ79_02800"
     tRNA            3328..3400
                     /locus_tag="VJJ79_02800"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3361..3363,aa:Asn,seq:gtt)
BASE COUNT         1054 a          733 c          680 g          986 t
ORIGIN      
        1 aaaatgaaaa ggtgcttgaa tatgcaatat cgggaaatat aggagaattt tatcgcgatg
       61 aaattgcatt gcgcgaagaa tttgagtacc ctcccttttc cgttcttata aaattaagcg
      121 ttatggggac aatggcacga gtgcagagag aaatggacat cttacaagca gagtttgaag
      181 ataatgagat acatatttac cccgcggggc ttatcgcccc acggggacgc gaaatacgcc
      241 acgccctctt gcgtatttct caaaaagaat ggcctgacct tgcaattgtg gaaaaattaa
      301 gaaaattacc gccacatata gccattgata tagacccaga aaatctactc tgaaagactt
      361 gtatatcttg cccacttatg atatgctgta ctaggtcagt tccttttcta cttcccacac
      421 agggactgat tgcggccagc cttgaatagt tgcggaaagt tccccttctc cccacgatcc
      481 agggctggcc gcccttttat gccatcactt gttgatggta ttttctatgt tattattgaa
      541 aaagtatcga atgtggcaat gtatcggttt ggccaccgat tacagcgcca ctgaccggtt
      601 cctggttaag gttaagaaaa agtctgctgg aaagcttcaa tcatttagtg tccatgcagc
      661 gccagggatc ggtcccaata ttaaaacctc gttgcaatta attctatgac ttttttgcag
      721 cgggattttt tatttctata cgaagtacgt aaaaatagat acaatagaca tacctatggt
      781 aaccattgtt caaaaaggtg cggatatgtt gcgacaaatt gctgttgaaa ttcctattgc
      841 tgacatacaa agcaagaaga taaaaaacat tatcaaagaa atgcacgtag gcattgcctc
      901 gcgtgcagat gcagttgcta ttgccgcacc gcaacttggc tattcactcc gtatgtttat
      961 ggtttccaaa cgtgtattta taacagagga gagagagata gacgcagatg atgtggtgta
     1021 tataaatcca actatcatca agcgttctcg aaaaaaaaac gaggccgatg aaggttgtct
     1081 ctctgttgaa caatggtacg ggaaaacagt gcgctctgaa aaagtgacta ttcgcgctta
     1141 taatgaaaaa ggttctctcc ttgagagagg ggcgagcggc ctccttgctc aagtattcca
     1201 acacgaagtt gatcatctca acggtattct ttttactgat catgccaccg agttagtaaa
     1261 acttcccaaa gacaaagaga aagaagaaaa gattgttgat acaaatagta aaccaaagaa
     1321 aaaatgaaga aacatgacgt tagatttgca ttttttggta catcaatatt ttccgttatg
     1381 gtgcttgatg aactaaaaaa agcagggttt acaccagcac ttattgttac aacagcagac
     1441 aaacctcaag gtcgaaaact tatcatatca gcttcccctg taaaaatatg ggcgcaacaa
     1501 gaaaaaattg atgtaatcca accagaccaa ttaacacctg aggtcctgtc tgacttagga
     1561 aattctgaat gggatctctt tattgttgca tcatacggaa aaattcttcc cggcgctctt
     1621 cttcacatcc cccatttcgg atctcttaat gtccatcctt cgcttcttcc aaaatatcga
     1681 ggcgcatctc ctatccaatc acaaatacta gcggacgaca gaaaaacagg tgtcaccatt
     1741 atgctcatgg atgaagcgct cgaccacggt cccatcattg cacaagcacg tatcgaaata
     1801 gatgaggcag actggccacc aaaaggaagc gagcttgaag agatgctcgc aacacttggt
     1861 ggttccttcc tcgctgaaac tatcccctca tggattgatg gtgccctcac gaaagaaaca
     1921 caagaagaag agaaggcaac attcacaaaa aagataacga aagaagatgg agaacttgat
     1981 atgaataatg gtgatgcgcg acagaatttt ttaaaaatac aagcatttga tgagtggcct
     2041 gttgcctact tttttgttga gaaaaaagga aagaagatcc gtgtaaaaat aacgagtgca
     2101 tcctaccgta atggcgtgct cacgctcgag cgtgtaatac cagaagggaa aaaggaaatg
     2161 ctctatagcg atttcctgcg cagttgattt attaatgacg aaaaagagag agaagagggt
     2221 ttcgataatt cctcgagcac gccctgcgaa acctttattt tttctttcga cggatgacga
     2281 aatctcttaa ctgaacacca cgctcgctta aactttgcgt gaatccttta agtttggcgc
     2341 ctcctcggcg caaaaggtgc ccctctttac gtttttctct tctcaattca cgaagtatag
     2401 tacttttaac accatcaata gcttcttcaa tagtttctcc ttccgcttca gcacgattta
     2461 caccacgacg tgtatgcatg gtaacttcag ctctaaacac atttccttgc tgatgatgcg
     2521 tagaacgtgc aagttctaca tcacacacaa cactagtatc atctttatcc atgaattttt
     2581 caaaagcatg gagtcgttta gtaaggtact ctcgcacatc cgctgttaat tcaagatttg
     2641 ttcctttaat atttatattc atcgtagtat attaggctat tatgcttctt caatattgaa
     2701 tactttatgc ggagagcgat gcccactgac aagtgcaaca tgtccaagtg gtaaattata
     2761 gtatgatcca agtaactctc gcactcgctt gttagcttga ttccgcttag cttcttcttt
     2821 tacacaagcg ataaacgtat tatgattttc tttcaagaag ctttcgcgac gagatccagg
     2881 caatacgtgt actcgaacat acatactaga tggtatcatc tgccttttta tattcacgat
     2941 caagatattc aacaatatca gctgattcat acatagaaac attctggtcc tcatcaatca
     3001 tatacggtac ctgtcgcttc cctccttttt gaataagctc ctctgcgatc gcttcatctt
     3061 taatattttt caaatttaca acaagtgcaa tctcgtctac cttatgaagt acggcggcgc
     3121 agtaaggaca tccatctttt acataaagtg taatcataga aaatagtggc taacgaatag
     3181 actctctttt attttaccat attccatagg ttcgagcata cagtatagaa acgttctaca
     3241 cagaatttct aatttttatt gaacactttt caaaaccttt tttcttaagt agaatagtgg
     3301 tgttctttaa acaaacaaaa gaaatattcc gcggtagctc agttggtaga gcgcctcgct
     3361 gttaacgagg atgtcacagg ttcgagccct gtccgcggag cccagttgga caactagcta
     3421 gttcgaggac cgtattgaat ggttttcgca agg
//
LOCUS       DATDZU010000084         2836 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_566500, whole genome shotgun sequence.
ACCESSION   DATDZU010000084 DATDZU010000000
VERSION     DATDZU010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_566500"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1252
                     /locus_tag="VJJ79_02805"
     CDS             <1..1252
                     /locus_tag="VJJ79_02805"
                     /inference="COORDINATES: protein motif:HMM:NF014011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase small subunit domain-containing
                     protein"
                     /protein_id="HLC22678.1"
                     /translation="QDREIAPRYNEGFGRRPDVLQFPGDVLELARKGATSFHISEERW
                     EDPLKLKPGMNKRDLDENRRGWDLCLDIDTPYWDYAKWTAYFLIEALKFHDVKNISVK
                     FSGGKGWHIVIPFESFPDEVNGRKTKDLFPEAPRVITAYLQNMIHEMLTQKILEKENV
                     QNICQRTGKKREEIMMDGKFDPFTLVDIDTVLISSRHLFRSPYSLHEKTGLVSVPIDI
                     KDVLTFDKRDAEPENVRAERKYLDRTKVTEKDAKTLIIQAFDWWGKKHEKKGPDQPLV
                     PGRTFELPTQAITEAYFPDCIQRILGGLDDGKKRAIFILINFLKHMQWPWPDIEAKVK
                     EWNTKNKEHLSETYLLGQLNWHKRQTQTILPPNCTNKAYYQDLRISCNPMICAKFKNP
                     VNCALNRAKNAQNKAPKNKKPYKE"
     gene            1274..1588
                     /locus_tag="VJJ79_02810"
     CDS             1274..1588
                     /locus_tag="VJJ79_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22679.1"
                     /translation="MKRYHELFREILNKEIPLVAIDLSQGPSELQIKGFFESKLEKKI
                     EEWKKEGHVSDQIIRSISYQYIGPSQVAGLPLVYRAFAELLLENNFTMRNGQWNYFSA
                     TN"
     gene            1622..2422
                     /gene="cas4"
                     /locus_tag="VJJ79_02815"
     CDS             1622..2422
                     /gene="cas4"
                     /locus_tag="VJJ79_02815"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HLC22680.1"
                     /translation="MLSVTDLTAYLFCQRKLYFKKVLGVHEKPKERTLYGTITHRTIE
                     RSGREDKDILCSFTENISIQDLELRYRHIYSTALIQSIQEEKYTLRTAGLDPMAVYRE
                     LWPSFLKEAQAKSASIFSHAHEKKVFKEMLWESLPKSEPEIKIVSETLGLVGVIDQLD
                     ENFVPIELKTGKAPRDGVWKEHMVQLGAYMLLLTEHAGKDVNYGFVEYRTVNERRKVV
                     MNLFLKDEILELIHRVNSLVQQSALPEKVKEEWKCQQCGIKETCFATK"
     gene            2464..>2836
                     /locus_tag="VJJ79_02820"
     CDS             2464..>2836
                     /locus_tag="VJJ79_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22681.1"
                     /translation="MKKRIIFVLMLLFLTSCTKEISETLMANENTTTDLENETDTEEI
                     IPCETIEECSEGKTCYLGFCIDEEDVAVYIPEAEEETVTRASETWNGTLYGTEYPYKE
                     KAECGDVTNHNTILFTVPSSLV"
BASE COUNT          914 a          611 c          611 g          700 t
ORIGIN      
        1 acaggataga gagattgcgc cgcgatacaa tgaaggattt ggaagaaggc cggatgtcct
       61 gcagtttcct ggtgacgttc tcgaacttgc acggaaaggc gctacctctt ttcatatctc
      121 tgaagaacga tgggaagatc ctttgaagct caagccaggg atgaacaaaa gagaccttga
      181 tgaaaaccgg cgtggctggg atttgtgcct cgatatcgat acaccctact gggactatgc
      241 aaaatggaca gcatattttc ttattgaggc attaaagttt catgatgtga aaaatatctc
      301 agttaaattt agtgggggaa aggggtggca cattgttatt cccttcgaat cttttcccga
      361 tgaagtcaat ggaagaaaaa caaaagacct tttccccgaa gcgccgcgcg tcatcactgc
      421 atacctccaa aatatgattc acgagatgct cacacaaaaa attcttgaga aagaaaatgt
      481 gcaaaatatc tgccaaagga caggaaaaaa gcgagaagag attatgatgg atggaaaatt
      541 cgacccgttc actcttgttg acatcgatac cgttcttatc tcgagcaggc atctgtttcg
      601 ttccccttac tcgctgcacg aaaaaactgg gctcgtgtcc gtccctatcg atatcaaaga
      661 cgtccttacc tttgacaagc gcgatgcaga gccggaaaac gtgcgcgcag aaagaaagta
      721 tcttgacaga acaaaagtga ctgaaaaaga tgcaaagacg ttgatcatcc aagcctttga
      781 ttggtgggga aaaaagcacg agaaaaaagg gccggaccaa ccgcttgttc cagggcgcac
      841 atttgaactt ccgacgcagg ccattacgga agcatatttt cctgactgca tccagcgcat
      901 ccttggcggt cttgatgatg gaaaaaaacg tgccattttt attcttatca actttttgaa
      961 gcatatgcaa tggccctggc ctgacatcga agcaaaagtg aaagaatgga acacaaaaaa
     1021 caaggaacac ctgagcgaga cataccttct aggacaactc aactggcaca agcgccagac
     1081 acaaacgatc cttccgccta actgcaccaa caaagcgtac taccaggacc tgcgtatttc
     1141 ctgcaaccct atgatctgtg caaagttcaa aaaccccgta aactgtgctc tgaaccgtgc
     1201 aaaaaacgcg cagaataagg caccgaagaa caagaaacct tataaggaat gatttattat
     1261 tagatataac ggaatgaagc ggtatcacga actgtttcgg gaaattctca ataaagaaat
     1321 accattagtt gctatcgatc ttagccaagg tccgtctgaa ctccaaatca aaggtttctt
     1381 tgagtccaag cttgaaaaaa aaatagaaga atggaaaaaa gagggacatg tttctgacca
     1441 aatcatccgg agcatctcgt accagtatat tggtccttca caagtagctg gactgcctct
     1501 tgtctaccgt gcattcgccg agctgctgct tgaaaataat tttaccatgc gcaacgggca
     1561 atggaactat ttctctgcaa cgaactaaat cattaaatag aagtttcttc tctctttttc
     1621 tatgctctct gtgacagatc ttactgcgta cctcttctgc cagagaaaac tctatttcaa
     1681 aaaagttctt ggcgttcatg agaagccgaa agaacgaaca ctctacggga ctattactca
     1741 ccgtaccatt gaacgttccg gacgagagga taaagatatt ctttgttcat ttacggaaaa
     1801 tatttctatc caagaccttg aactgcgcta tcgtcatatc tattctactg cgctcataca
     1861 aagcattcag gaagaaaaat acacgttgcg cacagcaggc ttagatccga tggcagtgta
     1921 ccgcgaactg tggcccagtt ttcttaaaga agcacaagca aaaagtgcct ccatcttttc
     1981 tcatgcacac gaaaaaaaag ttttcaaaga aatgctctgg gagtcgttgc ctaaaagtga
     2041 gccagagatt aaaattgttt ctgaaactct cggtctcgtt ggcgtgatag accagctgga
     2101 tgaaaatttt gttcccattg aactaaaaac tggaaaagct ccacgcgatg gcgtctggaa
     2161 agagcatatg gtacagctcg gtgcatatat gctattactc acggaacatg cgggaaaaga
     2221 cgtgaactat ggttttgtcg agtaccgcac agtgaacgaa cggcgcaaag tcgtgatgaa
     2281 cctgttcctt aaagacgaaa ttcttgagct aatccatcgc gtgaattctt tagtacaaca
     2341 atcggcgctg ccggagaaag tcaaagaaga atggaaatgt caacagtgcg gcatcaagga
     2401 aacatgcttt gctacaaagt aagacaatat ttttatatac tccaaactct cttcctaaat
     2461 acaatgaaaa agaggattat ttttgttctg atgcttttat ttcttaccag ttgcaccaag
     2521 gaaatttctg agactctcat ggcaaatgaa aatacaacta ctgatttgga gaacgaaact
     2581 gatacagagg aaataatacc ctgtgaaact atcgaggagt gcagtgaagg gaagacgtgt
     2641 tacctaggat tctgcattga tgaagaagac gttgcagtgt atattcctga agctgaagaa
     2701 gaaacagtaa cacgtgcctc tgagacatgg aatggaacgc tttatggaac agaatatccc
     2761 tacaaagaga aagcagaatg tggagacgta accaaccaca acaccatctt atttactgtc
     2821 ccttccagcc ttgttg
//
LOCUS       DATDZU010000085         3152 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1638910, whole genome shotgun sequence.
ACCESSION   DATDZU010000085 DATDZU010000000
VERSION     DATDZU010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638910"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..670)
                     /locus_tag="VJJ79_02825"
     CDS             complement(41..670)
                     /locus_tag="VJJ79_02825"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLC22682.1"
                     /translation="MNSLTQKEIGQKYQSFASNYDTWEGLIEWVIVGRLRRGLLREAK
                     GKVLDVGIGTGKNLRHYSDECDLTGIDYTPAMLEVARKRAKNLGRRIVLKRGDAQKLP
                     FKAGSFDTVVDTLCLCTYPNPVKALQEMKRVCKRDGQILLLEHGESSNDLLRRLQQRV
                     KKKQLERLGCHVDRDIVGLVQKAGLKILSVERRFFGIFCVIRAYAKNDV"
     gene            751..1311
                     /locus_tag="VJJ79_02830"
     CDS             751..1311
                     /locus_tag="VJJ79_02830"
                     /inference="COORDINATES: protein motif:HMM:NF024769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HLC22683.1"
                     /translation="MTEQRIYAGTQKDWRTWLEKNHLTEKKVGVIVHKKHTGKPTLSH
                     REYMNEAICFGWIDTTIKRLDEDTFLRYFARRNDKSRWSDNTLSYAKQLLAEGRMAPE
                     GIRRYNEGRSRKTHDHGIPKNPDMPEELKAALKKNMRAQKAFLLLAPSIKRLHYRMIL
                     RAKLPETREKRVRVAIAAVTGQKKRQ"
     gene            1346..1606
                     /locus_tag="VJJ79_02835"
     CDS             1346..1606
                     /locus_tag="VJJ79_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22684.1"
                     /translation="METEVKTIKGINEETWTKFKILAATKRVTMGNLLTTMVKEYEKY
                     SNDVWDKILKSGKILSDKEASDIEKITRNMRKEKGFRNVPDF"
     gene            1590..1967
                     /locus_tag="VJJ79_02840"
     CDS             1590..1967
                     /locus_tag="VJJ79_02840"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HLC22685.1"
                     /translation="MYLIFDTSILIDIERENKQTLAKVAELRTRYPIPPKIAFISYYE
                     FIHGIRKRNPQNKAKAEDFIRLFEIVNTTEETAKRLSQLKEKHELALADLLIAAQVWE
                     KQAILVTKDTDFKQINEIDKIIL"
     gene            2094..2327
                     /locus_tag="VJJ79_02845"
     CDS             2094..2327
                     /locus_tag="VJJ79_02845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22686.1"
                     /translation="MITTIQLSEETKNALERAKEKSSETYEEVIKMLLQQVEKQKREQ
                     EQLMIEECTEMSEEYLKITKEWETTDATLNGDW"
     gene            2329..2673
                     /locus_tag="VJJ79_02850"
     CDS             2329..2673
                     /locus_tag="VJJ79_02850"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011879191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HLC22687.1"
                     /translation="MKLQRGDIVIAGLEPVQGSEQGGTRPVLIIQNNISNEYSPTTIV
                     APLTSKIPSKEYPTNVFISKTESHLDKDSTILLNQLRTIDKSRVLKRISSLNSFLMNK
                     VDLALKVSLALQ"
     gene            2735..3004
                     /locus_tag="VJJ79_02855"
     CDS             2735..3004
                     /locus_tag="VJJ79_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22688.1"
                     /translation="MRLTTTQLRKATRELSQFIGSSSSSGGGACAKDLETKEYDAVPA
                     SHFNGAVAYVLQCDARNRTVRRYHPFNKDLSHISSTLPEGYDFSI"
BASE COUNT         1141 a          715 c          519 g          777 t
ORIGIN      
        1 tcaatagcta aacttttcgc acatcgccgc cagagtccat ttacacatca tttttggcgt
       61 acgctcgtat cacacaaaag attccgaaaa atcttctttc aacactcaga atttttaatc
      121 ctgctttttg caccaatccc acaatatctc tatcaacatg acatccgaga cgttccaatt
      181 gttttttctt tactctctgt tgcaatcttc gcaaaaggtc gttgctactt tctccatgtt
      241 ccaacaacaa aatctgccca tctcttttac atacccgttt catctcttgc aatgctttca
      301 caggattcgg atacgtacac aaacataacg tgtcaacaac cgtatcaaaa ctccctgctt
      361 tgaaaggcaa tttctgcgca tctcctcgtt tcaacacgat tctcctcccc aaattcttcg
      421 ctctttttcg agcaacttcc agcatcgcag gagtataatc aatccccgtc aaatcacact
      481 catcagaata atgtcttaaa ttcttccccg ttccaattcc aacatccaaa acttttccct
      541 ttgcctcacg caacaaacct cttctcaatc gtccaacaat cacccattca ataagacctt
      601 cccaagtatc ataattagat gcaaaacttt gatatttctg cccaatctcc ttctgagtca
      661 atgagttcat aagaccataa tcagaaagag ataaataaat cttcccttcc aaaaataaat
      721 ttttaaaaac ctctcttgcc tcacatctcc atgaccgaac aacgcattta cgcaggaacg
      781 caaaaagact ggcgcacatg gttagaaaaa aatcatctca cagaaaagaa agtcggagtt
      841 attgttcata agaaacatac tggcaagccc acgctttccc atagagaata tatgaacgaa
      901 gccatctgtt tcggatggat tgacaccacc atcaaacgcc ttgacgaaga cacttttctc
      961 cgctacttcg ccagaagaaa cgataaaagc agatggagcg ataatacgct ttcctatgca
     1021 aaacagctcc tcgcggaggg gcgcatggct cccgaaggca ttcgcagata taatgagggg
     1081 cgctcaagaa aaacccatga ccatggcatt ccaaaaaatc cagatatgcc cgaagaactg
     1141 aaagcggccc tcaaaaaaaa catgcgggca caaaaagcat ttctcctcct cgcaccttca
     1201 ataaaacgcc tgcactaccg aatgattctt cgtgctaaac ttcccgaaac tcgagaaaaa
     1261 cgcgtacgag tagcaatcgc cgcagtgact ggacaaaaaa aacgacaata gtaaaactta
     1321 aatactagta gtattatcat actttatgga aaccgaagtc aaaaccatca aaggaatcaa
     1381 tgaagaaacc tggacgaagt ttaaaatcct tgcagcaaca aaacgtgtaa cgatgggaaa
     1441 tctgctcaca acaatggtaa aagaatacga aaagtactca aatgatgttt gggacaaaat
     1501 tcttaagagt ggaaaaatac tttctgacaa agaagcgagt gatatagaaa aaataacgcg
     1561 gaacatgaga aaagaaaagg ggttcagaaa tgtacctgat ttttgataca tctattctga
     1621 tagacattga aagagaaaac aaacaaacgc ttgcaaaagt tgccgaatta agaacaagat
     1681 atccgatacc tccaaaaata gcatttatct cgtattatga attcattcac ggaatcagaa
     1741 aaagaaaccc tcagaataaa gcaaaagctg aagactttat cagacttttc gagatagtga
     1801 atacaacgga ggagactgca aaaagattgt ctcagctaaa agaaaaacac gaactagctc
     1861 tcgcagattt gctcattgca gcccaagttt gggaaaagca agcaattctg gtgacaaaag
     1921 acacagattt taaacaaata aatgaaatag acaaaattat tctttaaaac tcagaaggga
     1981 ctctttgagt aaatttcatc ctccagttat tttgtcgtta aaaaataagt ttaggataat
     2041 acaagttaaa accaagagaa aagttttata tactatagtt catctatagg gtcatgataa
     2101 ccaccatcca attaagtgaa gaaacaaaaa acgctttaga acgagcaaaa gaaaaaagct
     2161 cagagaccta tgaagaagtt attaaaatgc tattacaaca agtagaaaaa caaaaaagag
     2221 agcaagaaca gctaatgatt gaagaatgta cagaaatgtc ggaggagtat ctgaaaataa
     2281 caaaagagtg ggaaacaact gacgctacat tgaacggaga ttggtaacat gaaactacaa
     2341 agaggagata ttgttatcgc tggacttgag ccagttcaag gctctgaaca aggaggaaca
     2401 cgacccgtgc tcattatcca aaataatatc tcgaacgagt acagtcccac cacgattgtc
     2461 gcgcccctca cttcaaagat tccttctaaa gagtatccta caaatgtttt tatatccaaa
     2521 acagaatctc atcttgacaa agattctacc attctcctca atcagcttcg caccatcgac
     2581 aaatcacgag tcctcaagag aatttcgtcc ctaaattctt ttctgatgaa caaagtcgac
     2641 ctcgctctaa aagtaagtct cgcacttcaa taaaaaacct catcaaaaaa acagtcacaa
     2701 caatctttat aatcccctga ggtttctcaa aaagatgaga ctcaccacta ctcaattaag
     2761 aaaagcaaca cgagaattaa gccaattcat tggtagcagt tcttcttcgg gagggggcgc
     2821 gtgtgcaaaa gacctcgaaa caaaagagta tgatgcagtt cccgcgtctc actttaatgg
     2881 agcggttgca tatgtattgc agtgtgatgc aagaaataga accgtcagaa ggtatcatcc
     2941 attcaataaa gacctttcac atatttcttc tacacttcct gaaggatacg atttcagcat
     3001 ctaatttcct gcaaaaaata agtcctgaaa aagaccgcaa acgtataaat acatccgcct
     3061 cctcaaagaa tgatgaacaa ggtcgtgcat ttcgaaatcc ccgccgataa tctcgaacga
     3121 gcgcaaaatt tctatgcaac agtctttcaa tg
//
LOCUS       DATDZU010000086         2776 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1205491, whole genome shotgun sequence.
ACCESSION   DATDZU010000086 DATDZU010000000
VERSION     DATDZU010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1205491"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VJJ79_02860"
     CDS             <1..355
                     /locus_tag="VJJ79_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22689.1"
                     /translation="QSTSTPDCDVEGSVFSGMSITVDASLTKGEPLIRLLTRNNGSEF
                     FETSTWIRYNASTILENGSKEILGEGSNVYNGFLLVPKIISDTTISGNWRTASAEPNP
                     WEPQGTFMLTKQEGS"
     gene            complement(352..1575)
                     /locus_tag="VJJ79_02865"
     CDS             complement(352..1575)
                     /locus_tag="VJJ79_02865"
                     /inference="COORDINATES: protein motif:HMM:NF015400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase NADP-binding
                     domain-containing protein"
                     /protein_id="HLC22690.1"
                     /translation="MNNLKKPNLLVLGAAGGVSNAFLHQVLHHRTLFGKLVLLDPKKT
                     VIHDPYLDHKTLNYIFLQKRVAVSKKEKEYMNILKKYNIDIVLDLTDAPSIPLLEATD
                     RQGVSYVNTAMNDNVQTVSNLIFDVYKRRKQLNGAPHILCTGMNPGAVNMFVRYGIEK
                     FGVPEAITHFEYDMSHIAEKWMPMMTWSIKEFLVETSKDPGGVMQGRGKVKFLYPNAL
                     ENRRDMKPIISPIMKLSKYPHGFIVLHEENVTVAQKYNIPSRFIYAVNMQTMANLIHI
                     YEKKNKVHMRDLILGDNTNRVLDGADNIGVLLEYKTKKVYYFNAISNLAVVGTNATYT
                     QVAIGIWAALLTLIFDQLKSQVYFVEDLYETHYPYYLFDNLRVQEFVFKGKKLKRYNP
                     WLKMKRHEKFRHVYI"
     gene            1666..2118
                     /locus_tag="VJJ79_02870"
     CDS             1666..2118
                     /locus_tag="VJJ79_02870"
                     /inference="COORDINATES: protein motif:HMM:NF015377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /protein_id="HLC22691.1"
                     /translation="MKIPYYRQRYVYTCGPAVMRMALGALGIKRTEDQLARLLNTGTR
                     VGTPNRRFPRVLERFKLSYTVHRRAKFSQLVRHFRNNDIIIVCYFYEPEKVGHFAVVK
                     DISKTRIMLLDPIVGPDMSYRQIDFHRMWKKTGTFDNEKGWFIAIHKK"
     gene            complement(2146..2682)
                     /locus_tag="VJJ79_02875"
     CDS             complement(2146..2682)
                     /locus_tag="VJJ79_02875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22692.1"
                     /translation="MVKITVYPTYTDVNRMLQSFGKIDYSLAEEILLGNHSHFEDKLQ
                     FTYPVGLSVSKERWRKSWIFSDALFNMPDETKEYKSLAELVDGCREKMMQQKVLCERE
                     LDANVTLLPHFYTVEEVTTIDSQAASLLILAAYGKYLSLGEKGLILLLGFLPGKSIKR
                     GFSEQERQEFEKFFPDIY"
BASE COUNT          823 a          573 c          543 g          837 t
ORIGIN      
        1 tcaatcaacg tctactcctg actgcgatgt tgaagggtct gttttctccg gcatgtccat
       61 caccgttgat gcgtctctta caaaagggga acccctcatt cgcttgctca ccagaaacaa
      121 cggcagcgag ttttttgaaa cgagcacatg gataagatac aatgcatcta cgatcctaga
      181 aaatggatca aaagaaattc tcggcgaagg ttcaaacgtg tataacggtt ttctactcgt
      241 tccaaaaata atctctgaca caacaatttc tggcaactgg cgaacagcat cggcagagcc
      301 aaacccatgg gagcctcagg gaacatttat gctcacaaaa caagaaggaa gctaaatgta
      361 tacgtgcctg aacttttcgt gccgtttcat tttgagccac ggattatatc gcttgagttt
      421 ttttcccttg aatacaaact cctgcacacg caggttatca aagagataat aagggtagtg
      481 ggtctcgtag agatcttcaa cgaaatacac ttgcgatttt aattgatcaa aaatgagagt
      541 caataacgct gcccagatgc caattgcaac ctgcgtgtac gtagcattcg tcccgactac
      601 tgcaagattc gagattgcgt taaaataata taccttttta gttttatatt cgagaagaac
      661 accaatatta tccgcgccgt ccaaaaccct attagtatta tcacctagta ttaagtcacg
      721 catatggact ttatttttct tttcataaat atgaataagg tttgccatcg tctgcatgtt
      781 taccgcataa atgaagcgtg aaggaatatt atatttctgt gcaactgtca cattctcttc
      841 gtgcaaaaca ataaaaccgt gcggatattt gctaagtttc ataatgggag aaataattgg
      901 tttcatgtcc ctacgatttt ccaaggcatt tggatagaga aactttacct ttccacgtcc
      961 ctgcattaca ccgccgggat ctttgcttgt ctcgacgaga aattctttga tcgaccacgt
     1021 catcatcggc atccatttct cagcgatatg cgacatgtcg tattcaaaat gcgtgattgc
     1081 ttctggcacg ccaaactttt caatgccgta cctaacaaac atgttgactg caccagggtt
     1141 catgcctgta cacagaatat gcggcgcacc gttgagctgt ttccttcttt tgtacacatc
     1201 aaatataaga ttagaaacag tttgtacgtt atcgttcatt gcagtgttca catatgaaac
     1261 tccttgacgg tctgttgctt ccaagagagg aattgacggc gcatccgtga gatccagaac
     1321 tatgtcgata ttgtattttt ttagaatgtt catgtactct ttttcttttt ttgacactgc
     1381 aactcttttc tggagaaata tatagttcaa tgtcttgtga tctaggtacg gatcatggat
     1441 aacagttttc tttggatcta ggagcactag tttcccaaag agagttctat gatggagaac
     1501 ttggtgcaaa aaagcatttg aaacaccgcc tgctgcgccc aagacaagaa gatttggttt
     1561 cttcaaatta ttcatctccc ttttgttaca ggggaattga acttttaaat gttgctagaa
     1621 taacttggcg gtgattttat aaattgctga gctttacaag agaacatgaa gattccatac
     1681 tatagacaga gatatgtata tacctgtggt ccggcagtca tgcgcatggc gcttggtgcg
     1741 cttggaatca aacgaacgga agaccaactt gctcgtttgc ttaatacagg aacacgtgtt
     1801 ggcacaccaa atagacgatt tcctcgcgtc ctggaacgct tcaagctgag ctacacggtg
     1861 catcgccgtg caaaattttc ccaacttgtg aggcatttta gaaataatga tattatcatc
     1921 gtatgttact tttacgagcc agaaaaagta ggtcatttcg cggttgtcaa ggacataagc
     1981 aaaactcgca ttatgttact ggatccgatt gtcggtccgg atatgagtta tcgccagata
     2041 gattttcatc gtatgtggaa aaaaactgga acgtttgaca acgagaaagg ctggttcatc
     2101 gcaatccaca aaaaatgaat tcttagagaa tactaaggca cattcctagt atatatctgg
     2161 aaaaaatttc tcgaattctt ggcgctcttg ctcagaaaat ccgcgtttga tactttttcc
     2221 aggaagaaat cctaacaata aaataagacc cttttcccca agagaaagat atttgccata
     2281 ggcggcgagg atcagcaaac ttgctgcctg actatcgata gttgtcactt cttctacggt
     2341 ataaaaatga ggaaggagtg tcacatttgc atctaattct ctttcacaca gaactttctg
     2401 ttgcatcatt ttttctctgc aaccatcaac taactcagca agggatttgt actctttcgt
     2461 ttcatcgggc atattgaaca acgcatcaga aaatatccat gattttctcc aacgttcttt
     2521 agacaccgac aagccaacag gatatgtaaa ttgcaattta tcttcaaaat gagagtggtt
     2581 accaagaaga atttcttccg ctagtgaata gtctattttt ccaaatgact gaagcattcg
     2641 gttgacatca gtatatgtgg gatacacggt aatttttacc attgtcgtgg agaaatttcc
     2701 aacagcttaa aaagttttct tttaaaaata gaagagaaag gtttataaag aaagattttt
     2761 ctccacacta tcgtga
//
LOCUS       DATDZU010000087         6075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1548817, whole genome shotgun sequence.
ACCESSION   DATDZU010000087 DATDZU010000000
VERSION     DATDZU010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6075
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548817"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1871)
                     /locus_tag="VJJ79_02880"
     CDS             complement(<1..1871)
                     /locus_tag="VJJ79_02880"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HLC22693.1"
                     /translation="MLPDKVIKEKYKPIFWKNPEKYYATTVLKEEGFTRSICKTCKKP
                     FWSILKRTACGDPACSGEGFAFIGKSPAKNSLSYVDVWKNFSKMFTKLGYTPVKRYPT
                     VARWNPTMEYTNASIAAFQPFVISGEVEPPANPLVIPQFCLRFGDTDNTGITMSHNTG
                     FVMIGQHSFVSPEKWNQNEAFRHMLAWNSKGLGLKKEDMVFHEDAWAGGGNLGCCMEM
                     FSKGCELWNQVYMLYEQTPSGVKDLNIKVLDMGLGMERNAWFSQGTGTIYDATFPTVI
                     KNLEKITGVKKNEKLLQKYTPHAALLNADEVANLDVAWKTVAKKIGTDVKSLREDILP
                     LSHLYSVAEHMRSVLVVLNDGGLPSNVGGGYNLRMLIRRSLGFIELHNWNVSLPDVCG
                     RHARALKKLYPELEEGLEDVEKILDVEKTKWHNTIEKTKSIIARFTPQELTEKKLIEL
                     YDSQGISPEMIPCVKAPDDFYAKVSEMHEQKAHKAATVKEEHVAIGTVPDTKALYFQD
                     YKRTSFTGTVLKIVDDVVVLDQTAFYPTSGGQLHDLGTLNGCEVTEIWKQGSVILHKV
                     KNISFKEGAAVTGAIDVKRRIQMAQHHTATHIINAAARRVLGRHVNQAGAFKDVDKAR
                     "
     gene            complement(1917..2315)
                     /locus_tag="VJJ79_02885"
     CDS             complement(1917..2315)
                     /locus_tag="VJJ79_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22694.1"
                     /translation="MAVSRTSEQSVHVRIDTPVDKRKAVLQTAIDAVELLKRSDNIKH
                     IRHQKAATLLEFQNVLAKVNRLAKLLRMSELPLDSEELSHVRTVDGKHAFASHVHHMN
                     KKVVKHTEEKQKVNSLDSQLDALRRKLNTL"
     gene            complement(2320..2718)
                     /locus_tag="VJJ79_02890"
     CDS             complement(2320..2718)
                     /locus_tag="VJJ79_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22695.1"
                     /translation="MALFGKKREEKELPPLQFPELPKSVPSFEPESFDDDVDMIKSAV
                     SSAPSVSMRHVLPSSLGGTEKPLFVKIEKYRDVIDTLKKLKARLSEADTILSKLNHLK
                     EEEDRELAMWQSDLEKIRNQLLDIDRKLFE"
     gene            2845..3462
                     /locus_tag="VJJ79_02895"
     CDS             2845..3462
                     /locus_tag="VJJ79_02895"
                     /inference="COORDINATES: protein motif:HMM:NF014102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22696.1"
                     /translation="MKLSNEMVEDLARELVGDDVLPLVRLLLKKDNVSEFKLAEDLNV
                     TVNQTRNMLYRMNEHNLVSFLRKKDKKKGWYIYYWSLNRRSVANAMKKQKSQQLEMLK
                     ERLGREQESVFYVCPTGCMRMKMEHAMEVEFRCQECGALLQEQNNQKTIANIQRMIDD
                     IEKVVLQEEEKRQIPKKQLVKKKSFKKAVKKLVKAKVKKKFGKKK"
     gene            complement(3465..4019)
                     /locus_tag="VJJ79_02900"
     CDS             complement(3465..4019)
                     /locus_tag="VJJ79_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HLC22697.1"
                     /translation="MFLTLGEIIQLIVLTVVLGYIFSSFIQRPKPLYELRPWFDWDDV
                     KFAAMVAAPAVILHEFGHKFVALALGLEATFSIWPTGLFIGIVLKLLHSPILFLAPAY
                     VSFSANATAMQSILISVAGPAVNLLLWGISAHVLKTKRRMTQNELVGWAISKKLNLFL
                     FVFNMIPVPPLDGFKVLLGIIHLF"
     gene            4096..4296
                     /locus_tag="VJJ79_02905"
     CDS             4096..4296
                     /locus_tag="VJJ79_02905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22698.1"
                     /translation="MEKDWKQQMLLVSSVLVSLVIVVHAFRIVEDWSVCVQGFYIPQW
                     VNALAIGVLIVVLYGNVKALRS"
     gene            4338..4421
                     /locus_tag="VJJ79_02910"
     tRNA            4338..4421
                     /locus_tag="VJJ79_02910"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4372..4374,aa:Ser,seq:gct)
     gene            4544..>6075
                     /locus_tag="VJJ79_02915"
     CDS             4544..>6075
                     /locus_tag="VJJ79_02915"
                     /inference="COORDINATES: protein motif:HMM:NF040179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22699.1"
                     /translation="MTNVDLHRYDQRLACQVKNVEKAPISRRNKELIFEFQRYCVIQG
                     MSRPRIIKYLEILKTTALILGKDFDEVTKEDIMGFVQAIQQQDYSPWTKQTYKVMIKR
                     FYKWFKGNNEPPTLSDLLQTLESMEKRATVIEKSSLHSLINRLSIYVDGVFSFLNKHT
                     NINFGNTFVCFDIGDIPRPVKPVIMFLVLDYVYMKMRENIERKILLIDEAWSLLSRTE
                     DASYIFEIVKTCRKFNLGLLLINQEVEGLLTSEAGKSVLANSAYTVLMKQKPAVIYDV
                     CKTFHLSHVEKEYLLTAAVGEGILIIDNDHFELKVVASEEEHKLITTNPDELLKGQTV
                     SKSTEQHTTKKETPKSANEIETEKQQQKVTINVDSEKGFYKHRDLNLDEIKYLLAKKY
                     LIVEKKSIALGKVEKFLLKPRFNESINHFFVTKDIAQYLEQHGIKVEMFATKKPDITF
                     TLHGKKIAIEVETGTVYEKARKQLLEKVNELNKGYDVWFFVVTNRNYAQKYRKLGKTI
                     EMR"
BASE COUNT         1732 a         1255 c         1404 g         1684 t
ORIGIN      
        1 cgtgctttgt ctacatcttt gaacgcgcct gcctggttca catgtcgacc taaaactcgc
       61 cgtgcagcag cgttgataat gtgtgtcgcg gtatgatgct gtgccatttg tattcgccgt
      121 ttcacatcaa tcgcaccggt aacagcagca ccttccttga acgaaatatt ttttacttta
      181 tgaagaatca cgcttccttg tttccagatt tcagtaacct cgcagccgtt gagtgtgcca
      241 aggtcatgca gttgtccgcc ggaggtagga tagaatgcag tttggtcgag caccacaaca
      301 tcatcaacaa ttttcaagac ggttccagtg aacgacgtcc gcttgtagtc ctggaagtac
      361 aacgctttcg tatccggtac ggtgccgata gcaacatgtt cttctttcac cgtcgctgct
      421 ttatgtgctt tttgttcatg catttcggaa acttttgcat agaaatcgtc tggtgctttg
      481 acacaaggga tcatctctgg gctgatgcct tgggaatcgt acagttcaat taactttttc
      541 tctgtaagtt cctgaggagt gaagcgtgca atgatacttt tggttttttc tatggtattg
      601 tgccactttg ttttttcaac gtcaagaatt ttctccacgt cttctagtcc ttcttctaat
      661 tcagggtata gttttttaag tgcacgtgcg tgccgcccgc aaacgtcggg caatgacacg
      721 ttccaattat gcaattcaat gaacccaagg gaccgtcgga tgagcattcg cagattgtac
      781 ccgccgccaa catttgacgg caatccgcca tcattcaaga ccacaagcac gctgcgcata
      841 tgttccgcaa cggaatagag gtgcgagagc ggcagaatat cttctcttaa actttttacg
      901 tccgtgccta tttttttcgc aacagttttc caggcaacgt cgaggtttgc tacttcgtcc
      961 gcgttgagga gagctgcatg cggcgtatac ttctgcaaca atttttcatt ctttttcacg
     1021 ccagttatct tctcgagatt tttgatcacc gttggaaatg tcgcgtcata gatggtgccg
     1081 gttccttgcg agaaccatgc gtttcgttcc atccctaggc ccatgtcgag gactttgatg
     1141 ttgagatctt tcacgcccga tggcgtttgt tcatacagca tatagacttg gttccagagc
     1201 tcgcatcctt ttgagaacat ttccatgcaa cagcctaggt ttccgccgcc ggcccacgcg
     1261 tcctcgtgaa acaccatgtc ttcttttttc aagccaaggc ctttgctgtt ccatgcaagc
     1321 atgtgccgga acgcttcatt ctggttccat ttttctggcg atacgaaaga atgctggccg
     1381 atcatcacaa agcccgtgtt gtgcgacatg gtaattcctg tgttgtctgt gtcgccaaat
     1441 cgaagacaga actggggaat gacgagcgga ttggcaggcg gctctacttc accggatatc
     1501 acaaacggct ggaatgctgc aatcgacgcg ttggtgtact ccatcgtcgg gttccaccgt
     1561 gcaaccgttg ggtaccgttt cacaggagta tagcctaatt ttgtaaacat tttcgaaaaa
     1621 tttttccaga cgtcaacata tgagagagag ttttttgcag gacttttgcc gatgaatgca
     1681 aatccctcac cggagcacgc agggtcgcca cacgcagttc ttttgagaat ggaccagaaa
     1741 ggcttcttgc atgtcttgca gatgctgcgc gtgaaccctt cttctttcaa gacggtcgtc
     1801 gcataatatt tttcgggatt tttccagaag ataggtttgt acttctcttt gatgacctta
     1861 tcgggaagca tggaggcaga aaagtctaac agggtttata tgttttttgt aaagaattaa
     1921 agagtattaa gctttctgcg gagcgcgtcc aattgcgaat ccaaagagtt caccttctgc
     1981 ttctcttcag tatgctttac tactttttta ttcatgtgat ggacatgcga tgcaaaggcg
     2041 tgcttgccat ctactgtccg tacatggctt agttcctcac tatcgagggg aagttcgctc
     2101 atgcggagaa gttttgctaa ccggttaact tttgctaata cattttggaa ctcgagcagt
     2161 gttgcagctt tctgatgcct aatatgttta atattgtcag agcgcttgag aagttccaca
     2221 gcatcgatgg cagtctggag cacagctttt cgcttatcaa ctggcgtgtc aatgcgcaca
     2281 tgtacgctct gctccgacgt tctacttaca gccatttttt tactcaaaca attttcgatc
     2341 aatgtccaga agctggttcc tgattttttc aaggtcactc tgccacatag caagttccct
     2401 gtcttcttct tctttgaggt ggttaagttt gctgagaata gtgtctgctt cactcaaccg
     2461 ggctttgagt ttcttcaacg tatcgataac atctcggtac ttttcgattt taacgaacaa
     2521 tggtttttct gttccgccga gtgacgatgg aagaacatgc ctcatactga cagatggtgc
     2581 agaagaaaca gcgctcttta tcatatctac atcatcatcg aacgattctg gttcaaaact
     2641 aggaacactt tttggtaact caggaaattg taatggtggg agttctttct cttccctctt
     2701 ttttccgaat aaggccatgg cgtacacctc cgtaccacaa tgattgtgtt aggtttctaa
     2761 cagagtaaaa caatttaaaa gcttttcgta taaaaaagca aaagtcttaa ataggcagaa
     2821 tcgtcctgag attccaagtg tcctatgaag ctgagtaacg agatggtgga agacctcgcc
     2881 agggaactgg tgggggatga cgtgcttcca ttagttcgtc tccttctcaa aaaagataat
     2941 gttagcgagt tcaagcttgc agaagatctc aatgtcaccg tgaaccaaac acgaaacatg
     3001 ctttatcgga tgaacgagca taacctcgtt tcatttctca gaaaaaaaga taagaaaaaa
     3061 ggctggtaca tttattattg gtcgttgaac agacgcagcg tcgccaatgc aatgaaaaaa
     3121 caaaagtccc agcagttaga aatgttaaag gaaaggttgg ggcgcgaaca ggaaagcgta
     3181 ttctatgtct gtccgactgg ttgtatgcgg atgaagatgg agcacgcgat ggaagtcgag
     3241 tttcgctgcc aggaatgcgg ggcattattg caagagcaga ataatcaaaa aacaattgct
     3301 aacatccagc ggatgattga cgatatcgag aaggtggtgt tgcaggaaga agagaaaaga
     3361 caaataccta agaaacaact tgtaaagaag aaatcgttca agaaagctgt aaaaaaatta
     3421 gtgaaagcaa aagtaaagaa aaagttcgga aagaaaaaat agttctagaa aaggtggatg
     3481 attccgagaa gcaccttaaa cccgtcaagc ggtggcacgg ggatcatgtt gaacacaaag
     3541 aggaacaagt tcaatttttt tgaaattgcc cagccaacga gttcgttttg tgtcatcctt
     3601 ctttttgttt tgagcacgtg cgcgctgatg ccccagagca acaggtttac tgcaggtccg
     3661 gcaacgctga tgaggatgct ttgcatcgcc gttgcatttg ctgaaaaaga aacgtatgct
     3721 ggcgcaagga agagaatggg agagtgcaat aatttcagaa caataccgat aaacaagcct
     3781 gtgggccaga tggaaaacgt tgcttctaag cctaacgcca gtgcaacaaa cttatgccca
     3841 aactcgtgca ggatcacggc aggcgctgcc accattgcag caaacttaac atcgtcccag
     3901 tcgaaccatg gcctgagttc atacaacggt tttggtcgct ggataaagct ggagaaaata
     3961 tagccgagta cgacggtaag aacaatcagc tgaataattt ctccgagtgt gaggaacatt
     4021 cctaaaaagt gaagtggaag gaaatttaaa aaggtgatgg aaatgtttat gaattccaaa
     4081 ggcattcttt gcggtatgga aaaagattgg aaacagcaga tgcttttggt gtccagtgtt
     4141 cttgtttccc ttgtgattgt ggtgcacgcg tttcgtatcg ttgaggactg gagcgtgtgc
     4201 gtgcaggggt tctatattcc tcaatgggtg aatgcgttgg caattggtgt tcttatcgtg
     4261 gtgttgtacg ggaacgtgaa agcactccgc tcctaacaca aaacttttaa acgtgtgctt
     4321 gttttgaaaa aggtactgcc gaggtggcac aacctggtac tgcgcaggat tgctaatcct
     4381 gtttcctcac ggatttctgg gttcaaatcc cagcctcggc gcttgaatat tagttcttac
     4441 gccgtcccaa attccaagtc aattcggacg aattcgacgg gaactcaagc gtaatacaac
     4501 gcttaagtac gggtttaaat ttcttcttgt gggaggaaaa aacatgacaa atgtagacct
     4561 tcacaggtac gaccaacggc tcgcatgcca agtgaagaat gtagagaaag cgccaatatc
     4621 gcgaagaaat aaagaattaa tctttgaatt ccagcggtac tgtgtgattc agggtatgag
     4681 tagacctagg attattaagt atctagagat tttgaaaacg acagcattga tcctcgggaa
     4741 agattttgat gaagtgacga aagaagatat tatggggttt gttcaagcga ttcagcagca
     4801 ggactattcc ccatggacga aacaaacgta caaagtaatg ataaaacgtt tctataaatg
     4861 gtttaagggg aataatgagc caccaactct ttcagacctg cttcagactc tcgaatctat
     4921 ggagaaacga gcaactgtca tagagaaatc atcgcttcat tctcttataa acagattgag
     4981 catctacgtg gacggtgttt tcagttttct gaacaaacac accaacatta actttggcaa
     5041 tacgtttgtc tgctttgata taggggatat tcccagacca gttaaaccgg tgattatgtt
     5101 ccttgtctta gactatgtat atatgaaaat gcgggaaaat atagaacgaa aaatcctact
     5161 tattgatgaa gcatggagcc tgctttcacg cacagaggac gcctcgtaca tttttgagat
     5221 tgtcaaaacc tgccgaaagt ttaacctggg tctcttgtta ataaaccaag aagtggaagg
     5281 tcttttaacg tctgaggcag gaaaatcggt gcttgcaaac agcgcatata cggtgcttat
     5341 gaaacagaag cctgcagtta tctatgacgt ctgcaagaca tttcatctct cacatgtgga
     5401 aaaagagtac ctcctaactg ccgcggtcgg ggagggcatt cttatcattg acaacgatca
     5461 ctttgagctc aaagttgtgg catcagagga agagcacaag cttattacta caaatcccga
     5521 tgaacttctg aaaggacaga cggtttctaa aagtactgag cagcacacaa cgaagaagga
     5581 aacacctaaa agtgcgaatg agatagaaac ggaaaagcaa cagcaaaaag taacgattaa
     5641 tgtcgacagt gagaaaggct tctataagca tagagatttg aatcttgatg agataaaata
     5701 tcttcttgca aagaaatacc ttattgttga aaaaaagagc atcgctttag gaaaggtgga
     5761 aaaatttctg ctgaaaccga gattcaacga gagcattaat cacttttttg tcacaaaaga
     5821 tatcgcacag tatcttgaac agcatggcat taaggtagaa atgtttgcta caaaaaagcc
     5881 agatattact tttacattac acggaaagaa aattgcgata gaagtagaaa ctgggacagt
     5941 ctacgagaaa gcaagaaaac aattgctgga aaaagtaaac gaactgaata aggggtacga
     6001 tgtatggttt ttcgtggtca cgaatagaaa ctatgctcaa aagtacagaa aattaggcaa
     6061 gacgattgag atgcg
//
LOCUS       DATDZU010000088         3470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_95716, whole genome shotgun sequence.
ACCESSION   DATDZU010000088 DATDZU010000000
VERSION     DATDZU010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95716"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VJJ79_02920"
     CDS             complement(<1..222)
                     /locus_tag="VJJ79_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HLC22700.1"
                     /translation="MKYILLLSVLISFVAVYVMTPWFIKYLSKIGLVVKDQHKAGKPL
                     VPVSGGLVVFLGIFFGIMLAIFVQTFYYDS"
     gene            324..1250
                     /locus_tag="VJJ79_02925"
     CDS             324..1250
                     /locus_tag="VJJ79_02925"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011307454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLC22701.1"
                     /translation="MPLSLSVIFPMYNEEENIIPLLNATLPVVSSLTKDFEIVFVDDG
                     SKDKTQQILKQLRKEKYIKVYTLKKNMGKATALYVGFQKATKDIIITMDSDLQDDPRD
                     IPKLIEKINEGYDFVNGWKQNKHAEHKTPLKRLFSLFFNNLTYLLTKVDMHDYNCPFK
                     ALKNQVAKELFLYGDMHRYIPVQIANMGYKYAEVSVANHPRKFGETKYKSSRILRGFF
                     DLLTIKYLVGYKNRPLHIFGSIGLIFGGIGFLLDIYLFFLWVAKQGIGGRPLLMLAML
                     LTVLGIQFVSLGLIAEMITNNVIRNADELIRN"
     gene            complement(1259..>3470)
                     /locus_tag="VJJ79_02930"
     CDS             complement(1259..>3470)
                     /locus_tag="VJJ79_02930"
                     /inference="COORDINATES: protein motif:HMM:NF014565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004576 - oligosaccharyl transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="STT3 domain-containing protein"
                     /protein_id="HLC22702.1"
                     /translation="FFLLVQKIFDWKVALLASAFLTVIPAYLFRTMSGVSDKEAMAMI
                     FFYLTLYLFLCFILEKRFIKQFILMLLAALVAGFLWLLWGGYVFVFLTLGTFVFLLVI
                     LERIDIRTLVFYAIFFEIPLQMVRLFYPERYRFLDLVVTPAIGVMFIPLVLGFTHYLI
                     FTKDLLKIKSKLSGVPPFFVTIGVVVCLVIILFSAYAGPVALWDMVSSIFVDVLHPFA
                     QTRWSLTVAENQQPYFSEIIAFFGRLFLFVGYAGAVYLFYEISKRFSYARLLTVVYAV
                     FLLMLMASRLSPSSVLDGTTSLSLLFFFGGLFLFLITSGYIIFTMYRRNKEEYFQSVS
                     QIPVRYLLVGVLLIYLLLAGRSANRLIFVFAPMTAIFAAYGIVAIVRYVQQRYENRVL
                     HYGIGIASILLVIFLLNASFNSSLSQASAIGSFYNPSWQYAMDWVRETTPTDAVFAQW
                     WDYGYYIETIGQRATLSDGGNAHPSINYFMARHVFVGQNETEALQLLAAKNATHLLIS
                     AYEIDKYGAFSSIGSDANYDRFSWIPRYTLDLSQSQETRNSTNFLYVGNTAMDEDFIY
                     NGMVFPRAQAGIVAFLLPTVYDTNGTFVTFSQPTAYVSYLGQYTYVPVECVFYNGQKI
                     VYEKKGLDGCLDVIPTVNGNTQTDVGALLYLSSRVQDTVFTRLYLHGETWDHFTLVYS
                     DQQVAPFMVYNGMLLGPIKIWNISYPDDLEIPEEYYGTYVPQEVSVVDKEISPY"
BASE COUNT         1255 a          722 c          667 g          826 t
ORIGIN      
        1 cgaatcgtag taaaacgtct gcacaaagat cgcaagcata atgccaaaga aaattccgag
       61 aaaaacaacc agtccgcctg aaacaggaac gagaggcttc ccagccttat gttgatcctt
      121 aacgactaat ccaattttag aaagatattt gataaaccac ggcgtcatga cataaacggc
      181 aacaaagctg atcaacacgg agagcagcaa gatatatttc atgtcggtgc atgccatttt
      241 taaggcatat aaagattatg gatgtacttg atttataaaa gacaacaaaa gaattataaa
      301 cgataagaaa attttctgaa gaaatgccac tctctctctc ggttatcttt cctatgtata
      361 acgaagaaga aaacattatc ccattactaa atgcaacgct tccagtcgtt tcttcgctca
      421 caaaggattt cgaaattgtt tttgtcgatg atggaagtaa agacaaaacg cagcaaattc
      481 tcaagcagct tcgcaaagaa aagtatatca aagtctacac gctgaaaaag aatatgggaa
      541 aagcaacggc attgtacgta ggattccaga aagcaactaa agatattatt atcactatgg
      601 acagtgacct gcaggacgat ccaagagata tacccaagct tatcgaaaag ataaatgaag
      661 gatacgattt tgtgaacggt tggaaacaga acaagcacgc cgaacataaa acgccactca
      721 agcgactgtt ctcgttattc ttcaacaacc taacatacct cctaacaaag gtcgacatgc
      781 acgattacaa ttgcccgttt aaggcattga aaaatcaagt cgcaaaagaa cttttcttgt
      841 acggcgacat gcaccgatac attccagtgc agatagcaaa tatgggatac aagtacgccg
      901 aggtatccgt ggcaaatcat ccgagaaaat ttggagaaac aaaatataag tccagcagaa
      961 ttctccgtgg cttctttgac ctcctgacaa tcaagtattt agtaggatac aaaaaccgac
     1021 cgttacatat atttggttcc atcggtctca tctttggcgg catcggattt ttgttagata
     1081 tctatctttt tttcctttgg gttgcaaaac aaggcatcgg cggacggcca ctattgatgc
     1141 tcgcaatgct tctgacggtg ctcggcattc aattcgtttc cctcggtctt atcgcagaaa
     1201 tgatcacaaa caatgtgata cggaatgcag acgaattaat cagaaattaa aaaagtaatt
     1261 aatacgggga aatttcttta tcaacaacag aaacttcttg gggaacatac gttccataat
     1321 attcttcagg tatctctaaa tcatccggat aggaaatatt ccaaatcttt atcggtccaa
     1381 gaagcatacc attataaacc atgaaaggcg caacttgctg atcgctatat acgagagtaa
     1441 aatggtccca tgtctcgcca tgcaaataca aacgagtaaa gacggtgtct tggactcgag
     1501 acgaaaggta caagagtgcg ccgacatctg tctgagtgtt cccgttcacc gttggaatga
     1561 catccaaaca tccatcaagt cctttctttt catagacaat cttctgtcca ttataaaaaa
     1621 cacactcaac tgggacgtag gtgtattggc ctaagtaaga aacatatgcg gtaggctgag
     1681 aaaaggtaac aaacgttccg ttggtgtcgt acacagttgg aagaaggaaa gcaacaatcc
     1741 cagcttgggc cctaggaaat accatgccat tatatataaa atcttcatcc atagcagtat
     1801 ttccaacgta taaaaaattc gtactattcc gtgtttcctg agattgagac aaatcaaggg
     1861 tatagcgagg aatccatgaa aagcgatcat agttagcatc agaaccgata gatgaaaatg
     1921 ccccatattt gtcaatttca taagcagaaa tcaaaagatg ggttgcattt tttgcggcaa
     1981 gcaactgtag cgcttctgtt tcgttctgtc cgacaaacac atgccgtgcc atgaaataat
     2041 taatagaggg atgtgcgttt cctccatcac taagtgttgc acgttgtcca atcgtttcaa
     2101 tataatatcc ataatcccac cattgggcaa acacagcatc cgttggcgta gtctcacgca
     2161 cccaatccat tgcatactgc catgacgggt tataaaaaga cccgattgca gacgcttgtg
     2221 aaagagatga attgaaagat gcattcaaaa gaaagataac taaaagaata gaagcaatac
     2281 ctatgccgta atgcaacacc ctgttttcat atcgttgctg gacataccgc acaatggcaa
     2341 caataccata cgcggcaaag attgcagtca taggtgcaaa aacaaaaatc aaacgattgg
     2401 cgcttcgccc agcaagaagc aggtaaataa gtaaaacgcc tacaaggaga taacgaacag
     2461 gaatttgtga aacgctctgg aaatattctt ccttattcct tcgatacata gtaaaaatga
     2521 tgtatccgga agtaattaaa aataaaaata atccgccgaa aaagaaaagc aatgacagag
     2581 atgttgttcc atctagcacg cttgagggag aaagtctgct agccatcagc attagtaaga
     2641 aaactgcata gacaacagtc aataatcgtg catatgagaa acgttttgaa atctcataaa
     2701 acaaatacac tgcaccagcg tatccaacaa acagaaataa tctgccaaaa aatgcaataa
     2761 tctctgaaaa gtatggttgc tggttttcgg caactgtaag ggaccaccgc gtctgtgcaa
     2821 acggatgaag aacatcaacg aaaatggaag agaccatgtc ccataacgct acaggaccgg
     2881 cataggcact aaacaaaata ataactaaac atacaacaac cccaatagtg acaaaaaatg
     2941 gcggcacccc tgataattta gactttattt tcaagagatc ttttgtaaaa ataagataat
     3001 gggtaaatcc aaggaccagc ggaataaaca tcacgccgat ggctggcgtc acgacaagat
     3061 ccaagaatct atatcgctca gggtaaaata atcttaccat ctggagtgga atttcaaaaa
     3121 atatcgcata aaacacaagg gtgcgaatat caatacgttc gagaataacg agaaggaata
     3181 caaatgtccc cagcgtgagg aacacaaaaa catacccccc ccacagtaac cataaaaacc
     3241 cagcaacaag tgcagcaaga agcatcaaaa taaattgttt aataaaacgt ttctcaagga
     3301 taaaacacaa gaaaaggtac aatgtcaaat aaaagaaaat catagccatc gcttccttat
     3361 ctgagacgcc actcatcgtt ctgaaaaggt aggctggaat cacagtgagg aacgcagacg
     3421 caagcaatgc aactttccag tcaaagattt tctgaacaag gagaaaaaag
//
LOCUS       DATDZU010000089         3048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2117310, whole genome shotgun sequence.
ACCESSION   DATDZU010000089 DATDZU010000000
VERSION     DATDZU010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2117310"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VJJ79_02935"
     CDS             <1..374
                     /locus_tag="VJJ79_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III"
                     /protein_id="HLC22703.1"
                     /translation="MTQRLCDVIGNSCVNILGHPLGRLLNQREPISFDTEKVFQAAKD
                     HHVFLEVNGQPSRMDLPDDLIHKAREMGCQFVVSSDAHTKEQLLYTKYGVLTARRGWL
                     EKKHVLNTMSVKEIKKILETK"
     gene            complement(379..744)
                     /locus_tag="VJJ79_02940"
     CDS             complement(379..744)
                     /locus_tag="VJJ79_02940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22704.1"
                     /translation="MSLLYRREKEYLVKGKVLIDTYRHAVLNCAYAEIARAECNALLY
                     EIAGELLKKKVALKTIDNRKLLGALREDLEENKINLEHFMQQLNDINEGKLCQLAIPR
                     SGGYDINGAIEMLDSVLKK"
     gene            836..1222
                     /locus_tag="VJJ79_02945"
     CDS             836..1222
                     /locus_tag="VJJ79_02945"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HLC22705.1"
                     /translation="MVTLEAILYPDVGVLLLRFAVGAVFLYHAWPKLKAPAEMAKGIG
                     WPSWGPMVLGGVEMLGALSVILGVYAQLGAAALAVVMAGAIYLKVAKWKVPFSAMDKM
                     GWEFDLVLLAANLAILLGGAGAYALL"
     gene            complement(1234..2121)
                     /locus_tag="VJJ79_02950"
     CDS             complement(1234..2121)
                     /locus_tag="VJJ79_02950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22706.1"
                     /translation="MRSIFILGLLAGQDAHAVDITCQQGIGVAQYNITQDTPPSQPAI
                     KSLGTVLNYLCPEAFPFGCGYFTLRQNPTAPNMFSERVEEKRSKIIYAQDFLNTVTAQ
                     YGENASLGMFAHHVGHHLDTIANSPAWMDRSLNVELRSDVWAGCALAKAQLPKEAIAR
                     NVQVLADYPSPMHPGWGKRVEALTTGYVGCGGSVETLAVEHIDMTKRCEERSNAAYEG
                     CINNVPSVFQECLDVYQAQCMSNCRRTGYTQQHCEFFTCSSENQELLLTWKTVCVPTE
                     QKEKEWCNEVKKKVFLECQ"
     gene            complement(2186..2788)
                     /gene="trmY"
                     /locus_tag="VJJ79_02955"
     CDS             complement(2186..2788)
                     /gene="trmY"
                     /locus_tag="VJJ79_02955"
                     /inference="COORDINATES: protein motif:HMM:NF002560.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (pseudouridine(54)-N(1))-methyltransferase
                     TrmY"
                     /protein_id="HLC22707.1"
                     /translation="MREFIVYALKARTTPDFQIEDLPGAGRMDIVCEVILNALFISNA
                     MRRDTLVHVAMTGPRDPPKLVTFSGAALKGLNPDACSIAKMIQKALDSGRALKLNEEK
                     EISPGVTIAKKAFEPLVKEKAQASQLIYLDPDGKDIRNVSFEKNVTFVLGDYIGLPRN
                     TEKLLNRVGAQKIKLGPQVLFAAQCPILVHNQIDRQDAGW"
BASE COUNT          779 a          673 c          656 g          940 t
ORIGIN      
        1 aaatgacgca gcgcctatgt gatgtgatag gaaattcctg tgtcaatatc ttgggacatc
       61 cgcttggacg gttattaaat caacgagaac caatatcttt cgatacagaa aaagtgttcc
      121 aggcagcaaa agatcatcac gtgttcctcg aagtgaacgg acagccgtcg cggatggacc
      181 tgcctgatga cttgattcac aaagcacggg aaatgggatg ccagtttgtg gtaagctccg
      241 atgcgcacac aaaagaacag ctgttgtaca cgaagtacgg cgtgctcacg gcgcgtcgag
      301 ggtggcttga aaaaaaacac gtattaaaca caatgagcgt gaaagagatt aaaaaaattc
      361 ttgaaacgaa ataacgggtt atttttttaa cacactatct agcatttcta ttgctccatt
      421 tatatcatac cctccagacc ttgggatagc aagttggcac agttttcctt cgttgatatc
      481 attcagctgt tgcataaagt gctctaaatt aattttgttt tcttctaaat cctctctcaa
      541 agcaccgaga agctttctgt tatcaatggt ttttaacgct accttttttt tgagcagttc
      601 tcctgcaatc tcatagagaa gcgcattaca ttccgcacgt gctatctctg catatgcaca
      661 atttagaaca gcatgccgat acgtatcaat caaaaccttt cccttcacga gatattcttt
      721 ctctcgtcgg tacagcaaac tcatcttatt tttttagaat cctatgcttt aaaaatattt
      781 tcgtgctggt gcaaaataac aacctttaaa tattctcaga tagttttatt tctttatggt
      841 aactttagaa gcaattttat accctgacgt aggagtgttg cttcttcgct ttgcagtcgg
      901 tgcagtgttc ctataccatg catggcctaa attgaaagcg cccgctgaaa tggcaaaagg
      961 aattggctgg ccatcttggg gaccaatggt tctcggcggt gttgaaatgc ttggcgcact
     1021 ttccgttatt ctcggcgtgt acgcacagct tggtgcagca gcgcttgcag ttgtcatggc
     1081 gggagcaata tacctcaaag tagcgaagtg gaaggtgccg ttctctgcaa tggataaaat
     1141 gggatgggaa tttgaccttg tccttcttgc ggcgaaccta gcaatactcc taggcggagc
     1201 tggtgcatac gcactactct aattttttta tttttattgg cattctagaa atactttttt
     1261 cttcacttcg ttacaccatt ctttttcttt ttgctctgtg ggcacacata ctgtcttcca
     1321 cgttaggaga agttcctggt tttccgatga acacgtgaaa aattcgcagt gctgctgcgt
     1381 atatcctgtt cttcgacaat tactcataca ttgtgcttga tacacgtcaa ggcattcctg
     1441 aaaaacagag ggaacattat tgatgcatcc ttcatatgcc gcgttgcttc gttcctcgca
     1501 gcgttttgtc atatctatat gctccacagc cagcgtctca acagaaccgc cacaaccaac
     1561 gtatcctgtc gtcaatgctt ccacacgttt gccccaacca ggatgcattg gtgatggata
     1621 gtctgcaagc acttgtacat ttcttgctat tgcttctttc ggcaactgtg cttttgcaag
     1681 tgcacatcct gcccatacgt ctgaacggag ctctacattt aaagaacggt ccatccatgc
     1741 gggcgaattt gcaattgtat ccaaatgatg gccgacgtgg tgcgcaaaca tccctaggct
     1801 tgcattctcg ccgtactgtg ctgtcactgt attgagaaag tcctgtgcat aaataatttt
     1861 tgaccgtttc tcttccaccc gctctgaaaa catgttgggc gctgtgggat tctgccgcaa
     1921 cgtaaaatag ccgcagccaa acggaaacgc ttctggacag agataattga gcactgtacc
     1981 gaggctcttg atcgctggct gtgatggggg cgtatcctgc gttatattat actgtgcaac
     2041 gccgattcct tgctgacatg ttatatccac tgcatgtgca tcttgtcctg caagaagacc
     2101 gaggataaaa atgctgcgca tgcgtgttga tagaaacatt tcatttaata atatttatgt
     2161 tcatgtgtaa atattaagag tgtcgctacc agcctgcatc ttgccgatcg atttgattat
     2221 gcacgagaat cggacattgc gcagcaaaca gtacctgcgg acccagcttg attttttgtg
     2281 cacctaccct gttgagaagc ttttctgtgt tcctgggaag gccgatgtaa tcgcctagca
     2341 caaacgtcac gtttttttcg aacgaaacat ttcttatatc cttgccatca ggatccaaat
     2401 agatgagctg gcttgcctgt gctttttctt tcaccaaggg ttcgaacgct ttttttgcga
     2461 tcgtgacgcc gggagatatt tctttttctt cgttgagttt gagtgcacga cccgagtcta
     2521 gtgctttctg tatcattttt gcaatagaac atgcgtccgg gtttagccct ttcaatgctg
     2581 ccccggaaaa tgttactaac ttaggcgggt ctcttggccc tgtcattgca acatgcacga
     2641 gcgtgtccct tcgcattgca ttggagatga acagtgcgtt gaggataact tcgcagacaa
     2701 tgtccatacg gcctgcaccg ggaagatcct ctatttgaaa gtccggcgtg gttcttgcct
     2761 taagtgcata gacgatgaat tcgcgcataa cgatgaaaat aagctgtgat ttaaatagtt
     2821 agtctttaga atggctctgt agaacacttt tgcattccaa gactataagg ggtaaaaata
     2881 aataatttgt ttggtgcttt ttgcaccaaa tagccttttt cgaaggaaaa tgaaaaagag
     2941 cagaaatatt ttttctatta gtatcgataa tctctctaga ttgagagtta aaatcctgaa
     3001 aagtagttct attttttgtg tgcacagctt ttttgcagcg atagtttc
//
LOCUS       DATDZU010000090         5384 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1504378, whole genome shotgun sequence.
ACCESSION   DATDZU010000090 DATDZU010000000
VERSION     DATDZU010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5384
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504378"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..828
                     /locus_tag="VJJ79_02960"
     CDS             130..828
                     /locus_tag="VJJ79_02960"
                     /inference="COORDINATES: protein motif:HMM:NF020287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLC22708.1"
                     /translation="MIRKILVRNEKKLYWEKGDLHTASGVINEEDIAKETNQVKTHVG
                     KEFIVYNANFLDQLKNCRRGPQSLTLKDLGQILIHSGVGKESIVIDAGTGSGLLAAVM
                     AKHAKKVISYDINPDHSKLAKKNFEFLGIDNVELKEGNVYKNIDEKDADILTLDVPEP
                     WHVDTSCVKNGGTIIIYLPTITQVIEFCRQTKDYREQVIELLEREWYVEGVRVRPKSE
                     MLGHTAFLIIIRKV"
     gene            complement(825..1208)
                     /locus_tag="VJJ79_02965"
     CDS             complement(825..1208)
                     /locus_tag="VJJ79_02965"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HLC22709.1"
                     /translation="MIGIDSSILIDILRGNVPPFEFGKDSSLCTSEIVVYEVFCGLYG
                     SSHFSGKKIDQFEAILDTFTHIFPLDRKASVFAAQIFGKLSKEGHMIQHSDALIAGSL
                     LANGCTKFLTKNVKDFERIKDLEIL"
     gene            complement(1213..1452)
                     /locus_tag="VJJ79_02970"
     CDS             complement(1213..1452)
                     /locus_tag="VJJ79_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018031164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VapB family protein"
                     /protein_id="HLC22710.1"
                     /translation="MVTKNIAITEEAYNLMKRHKRHGESFSEVIREHFKKKNSILDYA
                     GIWADVPEKEWKEFEQRVVGARKGLSQSIKRKVGI"
     gene            1602..3398
                     /locus_tag="VJJ79_02975"
     CDS             1602..3398
                     /locus_tag="VJJ79_02975"
                     /inference="COORDINATES: protein motif:HMM:NF010335.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PINc/VapC family ATPase"
                     /protein_id="HLC22711.1"
                     /translation="MKSYVVDTSVIVDRIVSKLVKEGTIKGKILVPQAVMSELENQAN
                     TGREIGLIGLEEIQELQKLAKQEKIKVEIIGERPNVYQMKFAKRGGEIDAFIKDIAYK
                     ENAILITADLVQAESAKAMNVEVFFIERVVQEKIAIESYFDQHTMSVHLKEGAFPVAK
                     KGRPGEWTLTKINDKLLTGKEIETIAKEIVEKSRIDPNAFIEISRRSSTIVQYKEYRI
                     VIVRPPVADGWEITTVKPLKILKLEDYNLPEKIAQRVKTTARGVIIAGEVGSGKSTFA
                     MALAEWYAANNFITKTIESPRSLILSDSITQYSKNLASPIEIHDILFLSRPDYIIFDE
                     MRDTPDFELFTDLRLGGSNVLGVLHAATPIDAVQRFIMRLELGMIPSVLDTIIFIEKG
                     SVGKILTVKMAVKVPSGMTEADLARPVTEVRDLETDKLMFEIYSYGEETVVIPIQKTD
                     VPPAYKLAAKQIEREFQKYTDMVEVEMVGTHKVKVYVPQKDRARIIGAKGATIIDLEK
                     KLGISIDVETLGETSRSEQNRLNYQVAERGKNIILRVENPGATVDILIEDDFLFTSTS
                     SRKGEIKVNKKGEIGRRLVEAFDRNKKVYVKG"
     gene            complement(3395..4519)
                     /locus_tag="VJJ79_02980"
     CDS             complement(3395..4519)
                     /locus_tag="VJJ79_02980"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22712.1"
                     /translation="MRAVQVSSLQEKAIDTFSRLPLPVRRAVITPVNALRLQRVRHLQ
                     TPEVLVFYVLDTCNLRCNHCFYWKEVDNPREAHSLEQVEKLAKSFKEPLQLLTLTGGE
                     PFLRKDIVDVVHLFVKYTHVKRVHVASNGFTPEMITQKVKDMLAICGDTRITLQFSID
                     GFEELHDRLRGRVGSFKNVCETTKMVNAIKDPRLAVSVATVVHQKNFSTLKEFKKFVN
                     EELGVSLKINVLRKTSSVKGVPVEHLQDFDIRDEDYQVPTEEQLRALPDMIDDSSVHS
                     RIERKKLEHSRTILSGNKAVNCLAGIRDAVIFSNGDVGICEPTTPFANLKDYDYDFFK
                     LWTSHAAEEKKKAFLGKCFCLQSCNLLNAMSYDTETLVNL"
     gene            complement(4552..4992)
                     /locus_tag="VJJ79_02985"
     CDS             complement(4552..4992)
                     /locus_tag="VJJ79_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018032967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HLC22713.1"
                     /translation="MDIRDQKILSVLLENSRLSCREIAKRVGCSVATVINRMRELEKQ
                     GIVKGYVAQLDYEKLGYDVQAVISLRISKGKLFEVEKKIAILHPVFAVYDVTGNFDAI
                     VVAKFKSRKALDTFLKKIQAYDFVERTDTKLVLNTFKESPIKLS"
     gene            5153..>5384
                     /locus_tag="VJJ79_02990"
     CDS             5153..>5384
                     /locus_tag="VJJ79_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22714.1"
                     /translation="MDHEKALERILDIKYHTLPKGKTTIAAEYIWLDGENLPRTKDGE
                     VIEECPNLLKTLPEPRSKTKFITLKDGTPLEEI"
BASE COUNT         1782 a         1158 c         1059 g         1385 t
ORIGIN      
        1 tatttagata acttgggagc tctctcctgt actcagaaca cgtccttcgc cagagttctt
       61 tattcgttga cataataatt aaaaacgtag agagaacatt tataaacctt tcctctcaat
      121 ttttagagta tgattcgaaa aatcctcgtc aggaacgaga aaaaattata ctgggaaaaa
      181 ggcgacttgc atacagcctc tggcgtcatc aatgaagaag atattgcgaa agaaaccaat
      241 caagtcaaga ctcatgtagg aaaagaattt atcgtctaca atgcaaattt cctagaccaa
      301 ttaaaaaact gcagacgcgg accgcaaagc ctcacgttga aggacctcgg acaaattctg
      361 attcattcag gggttggtaa agagtcaatc gttatcgacg caggcacagg ctcaggtctt
      421 ctagcagcag tgatggcaaa gcacgctaag aaagtaatct cttacgatat caatccagat
      481 catagcaagc ttgcaaagaa aaattttgaa ttcctcggca ttgacaatgt tgaattgaag
      541 gaaggaaacg tctacaaaaa catcgacgag aaagatgcag atatcctcac acttgatgta
      601 ccagaaccat ggcacgtgga cacgtcctgc gtcaaaaacg gtggaacaat catcatttac
      661 cttcccacga ttacccaagt catagaattc tgccgacaga caaaagatta tcgagaacaa
      721 gtcatcgagc ttcttgaacg ggaatggtac gtcgaaggag tacgagtcag gccaaagtca
      781 gaaatgctgg gacatactgc attcttgatc atcatccgca aagtttaaag gatttctaaa
      841 tctttaatgc gctcaaaatc cttaacgttc tttgtaagaa actttgtaca accatttgca
      901 agaaggcttc ctgcaattaa tgcatcacta tgttgtatca tatgcccttc ctttgacaat
      961 tttccaaaaa tctgcgcagc aaaaaccgac gctttcctat ctaaaggaaa aatgtgcgta
     1021 aatgtatcta atatcgcttc aaattgatca atcttctttc cagaaaaatg agaggagcca
     1081 tataatccac agaagacttc gtatacgaca atttcactag tacataaaga ggaatccttt
     1141 ccaaattcaa aaggagggac atttccgcga agaatatcaa tcagaatgga actatcgata
     1201 ccaatcatat gtttaaatcc caaccttcct tttgatcgat tgacttaagc ctttccttgc
     1261 cccaacaaca cgttgttcaa attctttcca ttctttttca ggaacatctg cccagatgcc
     1321 agcgtaatca aggatagaat tttttttctt aaaatgctct cgtataactt ctgaaaaact
     1381 ttctccatga cgcttgtgcc ttttcataag attataggct tcttcagtta tcgctatatt
     1441 cttcgttacc atatatgtac ccatacgtgt acccatatat aaagttttct tttccattca
     1501 accatctccg gaatagagat ttatatgtct tttgcagaaa aacttgataa gttttcagac
     1561 cctaagaaag ctttaaaaag cccgagaaaa gcttgttgca catgaaaagt tacgtcgtag
     1621 acacatcagt aattgtcgac cggatagttt caaagcttgt gaaagaagga acaattaaag
     1681 gaaaaattct cgtcccacag gcagtaatgt cagagttgga aaaccaggca aataccggca
     1741 gggagatagg gcttatcggc ttggaagaaa ttcaggaact ccaaaagctc gcaaagcagg
     1801 aaaaaataaa agtcgagatt atcggtgagc gcccaaatgt ctatcaaatg aaattcgcaa
     1861 aacgcggagg agaaattgac gcgttcatca aggatatcgc atacaaagaa aatgcaattc
     1921 ttatcaccgc agacttagtc caggcagaat ctgcaaaagc aatgaacgtc gaagttttct
     1981 ttatcgagcg cgtcgtacag gaaaagattg cgatagaatc ctatttcgat caacacacga
     2041 tgtccgtgca tctaaaggaa ggagcattcc ctgtggcaaa aaaaggaaga ccgggagaat
     2101 ggacgctcac aaaaatcaat gacaaacttc tcacgggaaa agaaattgaa actatcgcga
     2161 aagagattgt agagaaatct agaattgacc ctaatgcgtt cattgaaatt tccagacgaa
     2221 gttcaacaat tgtccagtac aaggaataca gaattgttat cgttcggcca cctgttgcag
     2281 acggctggga gattacgaca gtaaaaccat tgaaaatctt aaagcttgaa gactataacc
     2341 tgccagaaaa aatagcacag cgtgttaaga caacagcgcg cggcgttatt atcgcgggag
     2401 aagttggctc aggaaaaagt acgttcgcca tggcgcttgc agaatggtac gcggcaaaca
     2461 attttatcac gaaaactatt gaaagccccc gttctttaat ccttagcgac agcattacgc
     2521 aatacagcaa aaatcttgcc agcccgatag aaattcacga tatattattc ctctctcgtc
     2581 cagattatat catttttgat gaaatgcgtg atacgccaga cttcgaactg ttcacagatc
     2641 tcaggttagg cggaagcaac gtactcggcg tccttcatgc agcaacacct atcgatgcag
     2701 tacagcgttt catcatgaga ctagaactag gtatgatccc gagcgtcctc gacaccatca
     2761 tctttatcga aaagggaagc gtgggtaaaa tcctcacggt aaaaatggca gtcaaagtgc
     2821 catcaggaat gacagaagca gatcttgcac gcccagtgac tgaagtaagg gatttggaaa
     2881 cagacaagct tatgtttgaa atttattcat acggcgaaga gacagtcgtt attcctatac
     2941 aaaaaacaga cgtgccacct gcatacaagc ttgccgcgaa acaaatcgaa cgcgaattcc
     3001 agaaatacac ggatatggta gaagtggaaa tggttggtac gcataaggta aaagtctacg
     3061 tcccgcagaa agatcgtgca cgaatcatcg gcgcaaaagg tgcaaccatc attgatttgg
     3121 agaaaaaatt aggaataagt atcgacgtgg aaacgctcgg cgaaacgtca cgaagcgaac
     3181 agaatcgatt gaactaccaa gtagctgagc ggggaaagaa tattattcta cgagtagaaa
     3241 atcctggagc aacagtggac attttaattg aagacgattt tcttttcaca tcaacatcaa
     3301 gcagaaaagg agagattaaa gttaataaaa aaggtgagat tggcagaagg ctagttgaag
     3361 catttgatag aaataaaaaa gtgtatgtga aaggctaaag attcaccagc gtctccgtgt
     3421 catagctcat cgcgttcaat aaattgcacg actgcagaca aaagcacttc cctaaaaatg
     3481 ccttcttttt ttcttccgca gcgtgagacg tccacagttt aaagaaatca taatcataat
     3541 ccttcaggtt cgcaaacggc gttgtcggct cgcagatccc aacatcacca tttgaaaaaa
     3601 tcaccgcgtc acggatccca gcaaggcagt tcactgcttt atttccggaa agaatcgtcc
     3661 tcgaatgctc aagctttttc cgctcgatac gggaatgaac ggaactatca tcaatcatgt
     3721 ccggcaatgc acgcagttgt tcttccgtcg gcacttggta atcttcatca cggatgtcaa
     3781 agtcctgcaa atgctctact ggaacaccct tcacgctgct tgtttttcga agcacgttta
     3841 tttttaatga gacgcccagc tcttcattaa caaatttctt gaactctttg agcgtagaaa
     3901 aattcttctg gtgaacgacc gttgcaacgg aaacagcaag cctcggatcc ttaattgcat
     3961 tcaccatctt tgtcgtctcg cacacatttt tgaagctccc aactcttccc cgcaacctat
     4021 cgtgcagctc ttcaaaacca tcaatggaaa actgtaaggt aattctcgta tcgccgcaaa
     4081 tcgcaagcat atcttttact ttttgcgtga tcatctccgg agtgaatcca ttgctcgcga
     4141 catgaaccct cttcacatga gtatacttca caaacaaatg cacgacatca acaatatctt
     4201 ttcgcaaaaa aggctcaccg ccagtaaggg tcagaagctg cagcggctct ttaaatgact
     4261 tcgcaagctt ttcaacctgc tcaagtgaat gcgcttcccg aggattatcc acttctttcc
     4321 aataaaagca atggttgcat cgcaaattac atgtgtcaag aacataaaag acaagaactt
     4381 ccggtgtttg caaatgcctt actcgttgta atctaagcgc gtttaccggc gtaataacag
     4441 ctcgtcttac agggagagga agtcttgaaa aagtatcaat ggctttttcc tgcagagaag
     4501 atacttgaac tgcacgcatc cgtttttatt ttttaaaaga gtatataagg tttatgacag
     4561 tttgataggg ctttctttaa aagtattcaa aaccaatttt gtgtctgtcc gctcgacaaa
     4621 atcataggcc tgtatttttt taaggaatgt atccaacgct ttcctgcttt tgaacttcgc
     4681 gacgacaatc gcatcaaagt ttcccgtgac atcatagacg gcaaatacgg gatgaaggat
     4741 agcaatcttt ttttcaactt caaacaattt tcccttggag attctgaggc tgatgaccgc
     4801 ctgcacatcg tagcctaact tttcatagtc gagttgtgca acatacccct taacgatgcc
     4861 ttgtttttct agctctctca tcctgttgat aaccgtcgca acggaacatc cgacgcgctt
     4921 tgcaatttcc ctgcacgaga gacgggaatt ctcaagaaga acacttagaa ttttctggtc
     4981 tctgatatcc atagagcaag ataaatgttt aattcctttt aaattttccg cagtaaaaaa
     5041 gacaaatggg tacgaacaag ccattatgta agacaaaagt ataataaaag taaacaaaaa
     5101 ttaatatgcg ctaataggat ttaaaattaa aaaattagtg agggagaaaa ccatggacca
     5161 cgaaaaagca ctggaacgca ttctagacat aaaataccat acactaccaa agggaaaaac
     5221 aaccatcgca gcagaatata tctggctcga cggagaaaac ctgcccagaa caaaggatgg
     5281 agaagttata gaagaatgtc ctaacctcct gaagacgctt ccagaaccga gaagtaagac
     5341 aaagtttatt acgttaaaag atggcacacc attagaagaa atag
//
LOCUS       DATDZU010000091         2282 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1532600, whole genome shotgun sequence.
ACCESSION   DATDZU010000091 DATDZU010000000
VERSION     DATDZU010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1532600"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2139
                     /locus_tag="VJJ79_02995"
     CDS             <1..2139
                     /locus_tag="VJJ79_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018201890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP cone domain-containing protein"
                     /protein_id="HLC22715.1"
                     /translation="KVFADLVRISKKHPTFVPTVEGIQNSVEKELMLSEYVVTAKAYI
                     LYRAERTKLRQQNEMVPEEVKDKIRESSKYFKTSYQEFIFYQFYSRWREEFGRRETWI
                     EAIDRFMDYMKENMGGKLTAMEYAEVRESILKQEVCPSMRLLWSSGKACRKTNVTSYN
                     CAYIAPVNWQDLSEIMYVSMCGTGMGFSVEPENVGKFPQISKQTGKFAPKIVVGDDKV
                     GWCEAFVLACEAWEKGLDVEIDYSQIRPAGAKLETMGGRASGPAPLMELMQFTRRKIL
                     ARQGRRLTTLDLHDVICQIGLIVVAGGVRRSALISLSAFDDSEMRDSKKGAFWQAEGQ
                     RSMANNSAVYESKPSAEEFLQEWTALVTSHAGERGIFNRDGLKVQVPKRRWENLKDKK
                     QVGMNPCGEIYLQSKQFCNLTSIVVRPTDDMENLKRKIRLATLLGTYQATLTNFEYLS
                     KEWKENCEKEQLLGVSITGYYDNKIIRDDKNLQTLRNESIKTNKKYAKRFGVNESTAI
                     TCVKPHGNSGQLLGVGSGMHTWYSHYYIRRVRISANDPLLKLAQDQGVPIKPEVGYST
                     SNASTMVLEFPCKAPEGAMVNKDVTALELLHEWKRLKVNFTEHNPSATIYVGDGEWIA
                     VADFVYKNWDIVGGLSFLPRNNHVYQLAPYEEITKEEYERRMKELLHIDFSKLVLYEK
                     QDQTTGAKELACVGGVCEIDYVPTEVPINA"
BASE COUNT          695 a          415 c          538 g          634 t
ORIGIN      
        1 aaggtttttg ccgaccttgt tcggatttcc aaaaaacatc ctacttttgt gccgactgtg
       61 gagggtattc agaattccgt tgaaaaagaa ttgatgcttt ctgaatatgt tgttacagca
      121 aaagcatata ttttgtatcg ggctgaacgc acaaaacttc gtcagcagaa tgaaatggtg
      181 ccagaagagg ttaaagataa aattagagaa agtagtaaat attttaaaac atcatatcaa
      241 gagtttattt tttatcagtt ttattcaaga tggcgagaag aatttggtcg cagggaaaca
      301 tggatagaag ccattgatcg cttcatggat tatatgaaag agaacatggg aggaaaactg
      361 actgctatgg aatatgcgga agttcgtgaa tcaattctta aacaagaggt ctgtccgtcc
      421 atgcgacttc tttggtcgtc gggcaaggcc tgtcgaaaaa cgaatgtcac ttcgtacaac
      481 tgcgcctaca ttgcgccggt aaattggcaa gacctttccg aaataatgta tgtttccatg
      541 tgtggcacgg gtatgggctt ttccgttgag ccggaaaatg ttggtaagtt tcctcaaatt
      601 tctaaacaga ccggtaagtt tgctccgaaa atcgtggtgg gagacgacaa agttggctgg
      661 tgcgaagcat ttgttttggc ttgtgaagca tgggagaagg ggctcgatgt agaaattgat
      721 tattcacaaa ttcgtccagc aggagcaaaa ctagaaacga tgggtgggag ggcttctggt
      781 ccggctccac ttatggaact gatgcagttt actcgccgca aaatactggc tcgtcaagga
      841 cgccgtctga ctacgcttga ccttcacgat gttatttgtc agataggtct tattgtagtt
      901 gctggaggtg tacgccgttc agctcttatt tctctctcgg cttttgatga ttctgaaatg
      961 agggattcta aaaagggtgc tttctggcag gcagaaggtc aacgttcaat ggcaaataat
     1021 tcagcagtct atgaaagcaa gccttctgca gaagagttct tgcaagaatg gacagctctc
     1081 gttacttcac atgcaggaga gagaggtatt ttcaatcgtg atgggctgaa agttcaagtt
     1141 ccgaagcgca gatgggaaaa tttgaaagat aaaaaacagg ttggaatgaa tccttgcgga
     1201 gagatttact tgcaatcaaa acaattctgc aatctgactt ctattgtggt gcgtccgaca
     1261 gatgacatgg aaaatttgaa gcgtaaaata cgcttggcaa ccttactcgg aacatatcag
     1321 gcaacactga caaactttga gtatctttcc aaagaatgga aagaaaactg cgaaaaggaa
     1381 caattacttg gagtttcaat taccggttat tacgacaata aaataattcg agatgataag
     1441 aatttacaaa ctcttcgcaa tgagtcaata aaaacaaata aaaaatacgc aaagcgtttt
     1501 ggtgtaaatg aatccacagc aatcacttgt gttaaaccgc acggcaattc tggacagctc
     1561 ttgggggttg gttcaggaat gcatacatgg tactcgcatt attatattcg tcgtgtccgc
     1621 atctcggcaa acgacccact tttgaaactt gcccaggacc aaggcgtgcc tattaaacct
     1681 gaagtcgggt attccacatc aaatgcatct actatggttt tagaatttcc ttgtaaagct
     1741 ccagaaggag caatggtaaa caaggatgta acagcccttg aactgcttca cgaatggaag
     1801 cgactaaagg tcaattttac cgaacacaat ccgtcagcca ctatttatgt cggtgatggt
     1861 gagtggattg cagttgctga ttttgtttat aaaaactggg atatcgtcgg aggactgtct
     1921 ttcttgcctc gaaataatca cgtctatcag ctcgcgccgt atgaagagat taccaaagag
     1981 gagtacgaac gtcgtatgaa ggaacttctc cacattgatt tttccaagct tgtattgtac
     2041 gaaaaacaag accaaactac tggtgcaaaa gaactggctt gtgtgggagg agtgtgtgaa
     2101 atagactatg ttccgacgga agttcctatt aacgcttaaa tcaaaagacg caccgtctgg
     2161 tgcgtctttt gatttgtttt gatacaatat attaatgaaa ataatcaaag ttgctataaa
     2221 cggtgtcgga cggattggac gggcatttct tagagttgca atcctgcgag aagatataaa
     2281 ta
//
LOCUS       DATDZU010000092         2304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2025558, whole genome shotgun sequence.
ACCESSION   DATDZU010000092 DATDZU010000000
VERSION     DATDZU010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025558"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..503
                     /locus_tag="VJJ79_03000"
     CDS             111..503
                     /locus_tag="VJJ79_03000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22716.1"
                     /translation="MVNRKIIVVFFAILVIVLIAGCRKRISTPVGPGEVVEEKTVENI
                     TSEEVVEEPTAADILKGDTEIDEEGKVVKSSATYAVLTGEKPKRISLWEGTGFVDEHG
                     NDTKSKAKFRRTLKDVELPECQYLCGGD"
     gene            complement(531..737)
                     /locus_tag="VJJ79_03005"
     CDS             complement(531..737)
                     /locus_tag="VJJ79_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22717.1"
                     /translation="MVQDRASLIVLAIVAIVAIVGIIMIVTEKPEARPQLPEEMIVGQ
                     TTTAGCFDISTLNRRTTRRYCVER"
     gene            805..1923
                     /locus_tag="VJJ79_03010"
     CDS             805..1923
                     /locus_tag="VJJ79_03010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HLC22718.1"
                     /translation="MVGLFRRDFLKGLAAAAFVLPGCATLSSRPCELSLEEIRAKTGY
                     PELSISALEGKLTIDVGNRNEIGDFKRVLYDLYERVEVKSPRGAILFLDPNRKVTSGV
                     LGIRYVNHQGIIRDLVFVNPEQYKTLQESEISLPVHKMGTFSGYEVFDTVLNVFEDVT
                     IKDGSQLLKIIQKDPYRLLPPCYRGHTDATKRFFENEREILDPAYVGIGGQHFRLYTD
                     DPQDLKKVRRILSRLASAKANKSFAEVMGSLSVYDDKISGGGIDGSGIATPLESLLTA
                     KTVDCDGIAKIYQHILNEAGFPTSLVLKPFIHSGKMYYHVWTETYVADAVVALNVAND
                     SKPVHAIIMPHSRALLDCQFTELPPSIVTQFEIKQAPL"
     gene            1920..2249
                     /locus_tag="VJJ79_03015"
     CDS             1920..2249
                     /locus_tag="VJJ79_03015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22719.1"
                     /translation="MIEITRREFNAYLGAFLAGAILPGCLPIRRDSGSLTVRDIRTLT
                     GYPELDISTLDDRLSIDIGTKNSVGEFRDVIYDYFPKKEVKTLYGVIYLDPDRKLEEG
                     IFQSDLK"
BASE COUNT          701 a          446 c          488 g          669 t
ORIGIN      
        1 aagtgtgctc gccagaagct cttatcgcaa gcagaagaaa gtcttcatag ttttaaccgt
       61 gttcaaactc aacgaaagtt ttataaaggt cgagtgatgt tcttcgcatt atggtcaaca
      121 ggaaaatcat tgtggtgttc ttcgcaattc tcgtcatagt tctcattgca gggtgtcgta
      181 aaaggataag cactcctgta ggacccggag aagttgttga agaaaaaact gtggaaaaca
      241 ttacttcgga agaggttgtg gaagagccga cagctgcaga tattttgaag ggcgacacag
      301 aaattgacga agaaggcaag gttgtcaaga gcagtgcaac gtatgccgtt ttaactggtg
      361 aaaaaccaaa acgtatcagc ctatgggaag gtaccgggtt tgtagacgaa cacggcaatg
      421 atacgaagtc aaaggcaaaa ttcaggagaa cccttaaaga tgtggaattg cctgaatgcc
      481 aatatttatg cggtggagat taattttttc ttcgtttgaa ttttttttat tcacctttca
      541 acacaatacc ttcttgttgt cctcctgttt aatgtggaaa tatcaaaaca gccagcggtg
      601 gtggtttggc caacaatcat ttcttcaggg agttgagggc gagcttctgg tttttctgta
      661 acaatcataa taatcccaac aatggccact attgccacga tcgcaagaac aattaatgat
      721 gccctatctt gtaccataaa aacacctctt ttcttggttt ttgggaccta atctatataa
      781 atttagttct tctccccctt tattatggtg ggccttttta gaagggactt tttgaaagga
      841 ttagcagctg cagcatttgt tctcccaggc tgcgcaacac tttcttcacg cccttgcgaa
      901 ctatctctag aagaaatacg ggcaaaaacg ggatatccgg aacttagtat cagtgctctt
      961 gaaggaaagc tgacaattga tgtcggaaat cgaaatgaga taggcgattt taaaagagtt
     1021 ttatacgatc tttatgaaag agttgaagta aaatcaccac gcggtgcgat actctttttg
     1081 gacccgaata gaaaagtgac atccggtgta cttggaattc gctatgttaa tcaccaagga
     1141 attatccgag acctggtatt tgtcaatccg gaacaatata aaacactaca ggaatctgaa
     1201 atttctctac cagttcataa aatgggaaca ttctcaggtt atgaggtgtt tgacactgtt
     1261 ttgaacgtct ttgaagatgt cacaattaaa gatggctcac aattgttaaa aattattcaa
     1321 aaagacccgt acaggcttct accaccatgc tatcgtggac atacagatgc aacaaagaga
     1381 ttttttgaaa atgaacgaga aattcttgat cctgcttatg ttggaatagg cggtcagcat
     1441 ttccgtcttt atacggatga tcctcaagat ctcaaaaaag tacgacgaat actcagcagg
     1501 ttggcatcgg caaaggctaa caaatctttt gcagaagtca tgggatccct ttctgtctac
     1561 gacgataaga tttcaggagg tggaattgat ggttcaggaa tcgccacacc tttggaaagt
     1621 ttacttaccg ctaaaacggt cgactgcgac ggaattgcaa aaatctacca gcacatcctt
     1681 aacgaagcgg gttttcctac ctcgctagtc ttaaaacctt ttattcattc tggcaaaatg
     1741 tattatcacg tctggacaga aacatacgtt gcagatgcag ttgtcgcgct caacgtcgcg
     1801 aatgatagca agccagtgca cgcaattatc atgccgcact caagggcatt gcttgactgc
     1861 caattcacag aacttccccc tagcattgta acacaattcg aaataaaaca ggctccatta
     1921 tgattgaaat tacaagaaga gaatttaatg cgtatctggg ggcgtttcta gcaggagcta
     1981 ttcttccagg atgcttgccc attcgtcggg attctggctc tcttaccgtt cgagatattc
     2041 gcacgcttac aggttatcca gaacttgata taagcacttt agatgataga ctttcaattg
     2101 atattggaac aaaaaacagc gttggtgaat ttcgagatgt tatctatgac tattttccca
     2161 aaaaagaagt caaaacgctt tatggcgtta tctatctaga tcctgacaga aagcttgaag
     2221 aaggaatttt tcaaagtgac ctaaaatagt attgtttata tattagttat tctttctttt
     2281 catcgaggtg aatcttgatg agaa
//
LOCUS       DATDZU010000093         2512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_267970, whole genome shotgun sequence.
ACCESSION   DATDZU010000093 DATDZU010000000
VERSION     DATDZU010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267970"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..1079
                     /gene="rpl3p"
                     /locus_tag="VJJ79_03020"
     CDS             111..1079
                     /gene="rpl3p"
                     /locus_tag="VJJ79_03020"
                     /inference="COORDINATES: protein motif:HMM:NF003261.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HLC22720.1"
                     /translation="MGQPHHPGRGSLQFWPRARSSKHTARVRAWPIVKENKLLGFIGY
                     KAGMTHLLVKDENPNSPRKNLDVFTPVTVIECPPLKAYSVRYYTENEDGDMKLTSEVF
                     AKKTEKELARKTGVSKKENKAPNTYDMVRLVVYTQPKLTGIGKKKPDLVEIALGGKDI
                     HEQASLAVSLLDKQIKVSEVFRDAQLVDVHAVNKGKGFSGTVKKFGVKRLQHKSEKGV
                     RGIGTLGPWHPNKVKYSVPQAGKFGYHLRTEYNKICVKVGTSPEKVNPKGGFVRYGVV
                     KNEYLLIKGSVPGAVKRPITVINALRSKRKVYGQPITYTSVESKQR"
     gene            1076..1897
                     /gene="rpl4p"
                     /locus_tag="VJJ79_03025"
     CDS             1076..1897
                     /gene="rpl4p"
                     /locus_tag="VJJ79_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013194323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HLC22721.1"
                     /translation="MKVPIIDLDGKKGKDMTLPSQFSEPFRPDLIKKAVLVLQSHNVQ
                     PYGINPEAGKRASSYVSKRRHAYKTTYGRGQSRSPRKILTRRGLHMYYVGAFAPNTVG
                     GRVSHPPKAEKIWARKMNPDERRKAIRSAIAATMNEILVKKRGHKSMSVIIDSAFEDL
                     KKTKDVEEVLKKVGMDEELERISKKKVRAGKGKNRGRPYRKKKGPLFVVSQDCSLKYA
                     AENLQGVDVCVVRELNTELLAPGTDAGRLTFWSEKALALLEKEKLFYTRRKGGSI"
     gene            1894..2148
                     /locus_tag="VJJ79_03030"
     CDS             1894..2148
                     /locus_tag="VJJ79_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018204248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HLC22722.1"
                     /translation="MNNVLKYPLTTEKNVKLMQSENKLVFIVEKSATKPEIKKAAEEF
                     FKIKVVKVNTSILSSGEKKAYLKLAPETPAIDVATQLGLI"
     gene            2150..>2512
                     /gene="rpl2p"
                     /locus_tag="VJJ79_03035"
     CDS             2150..>2512
                     /gene="rpl2p"
                     /locus_tag="VJJ79_03035"
                     /inference="COORDINATES: protein motif:HMM:NF012408.4"
                     /note="one of the primary rRNA-binding proteins; required
                     for association of the 30S and 50S subunits to form the
                     70S ribosome, for tRNA binding and peptide bond formation;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HLC22723.1"
                     /translation="MGKRIISRRRGRGTTTYRAPSHRYYGEISYRTYDDTEKNSVVYG
                     KVTDLLSCPGHSAPLAKVMYDTKEEILLSAPLHVKVGDIVASGSAAAVQAGNVVPLKN
                     LPEGTFIFNIECKPGDGGK"
BASE COUNT          853 a          514 c          572 g          573 t
ORIGIN      
        1 cggtcttgat tctttaaaaa aggcgagtgc aggtttgacg tcttgaaacc tgctgtcttg
       61 gcaacaagac ataccataaa ggaagagaaa gaacatacag agaaatcagt atgggacaac
      121 cacatcatcc aggaagagga agtttgcagt tttggcctcg agctcgaagt agtaagcaca
      181 ccgcacgtgt gcgcgcgtgg ccaatagtaa aagaaaacaa actcctcggg ttcattggct
      241 acaaagctgg catgacgcac cttctcgtga aagatgaaaa tcctaattct cctcgaaaaa
      301 atctcgatgt ctttactcca gtcactgtca ttgaatgtcc tccactcaaa gcgtactctg
      361 ttcggtatta tacagaaaat gaagatgggg acatgaagct gacctctgaa gtttttgcaa
      421 agaaaaccga aaaagagttg gcacgaaaaa caggcgtgtc caaaaaagaa aacaaggcac
      481 ctaacactta tgatatggtg cgtcttgtcg tctataccca gccaaagctt actgggattg
      541 gaaagaaaaa acctgacctt gttgaaatag cacttggcgg caaagatatc catgaacaag
      601 cttctcttgc agtttctctt ctagataaac aaattaaagt ttctgaagtg ttccgtgatg
      661 cacagttagt tgacgtgcat gcggttaata aaggaaaagg gttctctgga actgtcaaaa
      721 agttcggtgt caagcgattg cagcacaagt cagaaaaagg tgtacgtggc atcgggacgc
      781 ttggaccgtg gcacccaaac aaagtcaagt atagtgttcc acaagcggga aagttcggct
      841 accatctcag aacagaatac aataaaattt gcgtcaaggt aggaacaagc ccggaaaaag
      901 taaatcctaa agggggattt gtccgttatg gtgttgtcaa gaacgagtac cttctgatca
      961 agggatctgt tcctggtgca gtaaaaagac ctatcacagt catcaatgca cttaggtcaa
     1021 aaagaaaggt gtatggtcaa cctattacct atactagcgt ggagtcgaaa caacgatgaa
     1081 agtacctatt atcgacttgg acgggaaaaa aggaaaagat atgacgttac cgagccaatt
     1141 ttctgaaccg tttagaccag acctgatcaa aaaagctgtc cttgttcttc agtctcacaa
     1201 cgtgcaaccc tatggaataa atcctgaggc aggaaaacgt gcatcttcct atgttagcaa
     1261 acggcgacac gcctacaaga ctacgtatgg gcgcggtcag tctcgttctc ctcgaaaaat
     1321 cctaactaga cggggcttgc atatgtacta cgtcggcgca ttcgctccaa acactgtcgg
     1381 cgggagagtt tcgcatccac caaaagcaga aaaaatctgg gcacgaaaga tgaatccaga
     1441 tgaaagacga aaagcaatcc gaagtgccat tgcagcaacc atgaatgaaa ttcttgtcaa
     1501 aaaacgtgga cataaatcaa tgtctgttat catcgatagt gcctttgaag atctcaagaa
     1561 aacaaaggat gtggaagagg tgttaaaaaa agtaggaatg gacgaagaat tagaacgtat
     1621 cagtaagaaa aaagtacgag caggaaaagg aaaaaatcga ggacgacctt accgaaaaaa
     1681 gaaaggacca ctttttgtcg tctcacagga ttgctcatta aaatacgctg cggaaaatct
     1741 ccaaggcgtt gatgtctgcg ttgttcgaga attaaataca gaacttcttg cacctggtac
     1801 tgatgcagga cggttaacct tctggtcaga aaaagcactc gctctactcg aaaaagaaaa
     1861 actcttttat actaggagaa agggaggaag catatgaata atgtcctcaa gtatccgctt
     1921 actacagaaa agaatgtcaa gcttatgcag agcgaaaaca agctcgtgtt tatcgtagaa
     1981 aaaagtgcaa ctaagccaga aattaaaaag gctgctgaag agtttttcaa gatcaaagta
     2041 gtaaaagtta atacctccat cttaagttca ggagaaaaaa aggcgtactt gaaacttgcg
     2101 ccggaaacac ctgccattga cgtggcaacg caactagggt tgatctaaca tgggtaaacg
     2161 aattatttca cggagacgag gaaggggaac gactacctat cgtgcaccta gccatcgcta
     2221 ttatggtgaa atctcttata gaacatacga cgatactgaa aaaaattctg ttgtttacgg
     2281 aaaggtaaca gacctgctct cttgcccagg acactccgcg ccacttgcaa aagtcatgta
     2341 cgatacgaaa gaagaaattc tgctctctgc accactgcac gtcaaagtag gagatattgt
     2401 tgcatcagga agtgccgcag ccgtgcaagc aggcaatgta gtcccactca aaaacctacc
     2461 agaaggaacg tttatcttta atattgaatg caagcctggc gatggcggga aa
//
LOCUS       DATDZU010000094         2903 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2035965, whole genome shotgun sequence.
ACCESSION   DATDZU010000094 DATDZU010000000
VERSION     DATDZU010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2035965"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VJJ79_03040"
     CDS             <1..745
                     /locus_tag="VJJ79_03040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22724.1"
                     /translation="IQHIPIGTALVTGVVDLPLLVAIRPRMSKHGGEAISAFLDDDEM
                     TEEPKEDVAYGDVLPIVKQPFSIEDIRVMHGAQVQVTHEAVPCALLLCTKNEEEFRLL
                     VDLVTLNVIENSEDASGQSLLDLKLQDINQKQEKILALAVTLGAFTPGDLFGKSGLTF
                     SEFYDAVQTLERKGYLMKEGNGYTLSSSMRFLATLDTKRFYQPLTYTKTNATLLLAKY
                     PMTVVRDFLNKFIEVKDVKDCYLEKYTVA"
     gene            836..1585
                     /locus_tag="VJJ79_03045"
     CDS             836..1585
                     /locus_tag="VJJ79_03045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22725.1"
                     /translation="MAFENFDKYILQRPETLEEILGILESIPKPTRTITECLGDMSVA
                     LATLDLGTEHSIVGGYAVLAHLVSRFGDRIFPIWRGANDIDMVGSQRVLNALHATYNL
                     KQYQLNHSIKNKYTLRIPGTTESDPECKIDFVLDRNVYRHSSETEEIMILGILIRVLT
                     PLALIKGKLEAARSGEKHIIDIVHLLGVLEHRKAAPMDIVKTFNSKERLLLYNCLSDG
                     FDPHVCNTRVNIGPTGTYVRSLRSELHNRAY"
     gene            1711..2154
                     /locus_tag="VJJ79_03050"
     CDS             1711..2154
                     /locus_tag="VJJ79_03050"
                     /inference="COORDINATES: protein motif:HMM:NF022987.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3232 domain-containing protein"
                     /protein_id="HLC22726.1"
                     /translation="MTNPEEENALERYRLIITIVGEYANEKKGMYIKLISDLVSYCAE
                     YVRIIIEVEAFTQFGRHALETKVYQKEMIEYDKRRKIAHEALLSQLYIVNRALLKEEL
                     LKGKVPIGGIYSLNPDTIRDRNSVSDWAGYLVKALARRGFVKLKR"
     gene            2191..2547
                     /locus_tag="VJJ79_03055"
     CDS             2191..2547
                     /locus_tag="VJJ79_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22727.1"
                     /translation="MVEITSQWLRALDILYNDQTDSGKRCAAQILEVSARYINLLAKD
                     TVDSDVGRLGCFKRGTSLDEEVEASFVSLQDVMKHTNQYLASIGVEKAFPEKGREHLY
                     QIANNVVTRFYEARIK"
     gene            complement(2548..>2903)
                     /locus_tag="VJJ79_03060"
     CDS             complement(2548..>2903)
                     /locus_tag="VJJ79_03060"
                     /inference="COORDINATES: protein motif:HMM:NF013626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HLC22728.1"
                     /translation="LKDAYEDWKQGNETELRKIILPMETAVEHIGKVWLFDSAVDAIC
                     HGAFLSVPGIAKLESGIEVGDPVALLSLKGELIAIGTARMNAQNMLMQERGIAVAETK
                     VFMERGTYPKFVKKE"
BASE COUNT          891 a          584 c          606 g          822 t
ORIGIN      
        1 aatacaacat attcctattg gtactgcatt ggttactggt gtggttgacc tgccgctcct
       61 tgtcgctatc aggccacgaa tgagcaagca tggaggcgaa gcgatcagtg cgttccttga
      121 tgacgatgaa atgacagagg aaccaaaaga agatgtcgcg tatggagacg ttctcccaat
      181 cgtgaaacaa ccgtttagca tcgaggacat tcgcgtgatg catggcgcac aggtgcaggt
      241 gacgcatgaa gcagttccct gtgcattgct tctctgtaca aagaacgaag aagaattccg
      301 gttgctggtt gatctagtaa ctctgaacgt tatcgaaaat agtgaagatg cttctggaca
      361 gtcgctccta gacttaaaat tacaagatat caaccaaaaa caggaaaaaa tccttgcgct
      421 tgcggtaaca cttggagcgt ttacgcctgg agaccttttt gggaaatccg ggctgacatt
      481 ttctgagttt tatgacgcgg tgcagacgct ggaacgaaaa gggtacctta tgaaagaagg
      541 gaatgggtac acattgagct cctctatgcg cttccttgcg acgctggata cgaaacgatt
      601 ttatcagccg ctcacttaca cgaaaacaaa tgcgacgctt cttctcgcaa aatatcccat
      661 gactgtggta cgagattttc tcaacaagtt cattgaagta aaagacgtaa aggactgtta
      721 tttagaaaaa tatactgttg cttaatcttc tctcgtaaaa ccatcaaact cttattcatt
      781 tataagtggt gacaatatgc gaaacgttta taaacactat tgctccacaa gtagtatggc
      841 tttcgaaaat tttgacaaat atatattgca aaggcctgaa acattagaag agattcttgg
      901 tattcttgaa agtattccta aacctacacg aactataaca gagtgtcttg gggatatgtc
      961 tgtcgctttg gcaactttgg acttaggaac tgagcacagt atcgtcggag gatatgctgt
     1021 tcttgctcac cttgtgagta gatttgggga tagaatcttt ccgatttgga gaggcgccaa
     1081 tgacatcgat atggttggct ctcagcgagt actaaatgcc ctccatgcaa catataatct
     1141 aaaacaatat cagctaaacc attctattaa aaacaagtat actttgagaa taccgggcac
     1201 tacagagtca gatccagagt gtaaaattga ttttgttctt gatagaaatg tttacagaca
     1261 ctcttctgaa actgaagaaa taatgatcct tggcatcctg attcgtgtac tgacaccact
     1321 cgcacttatc aagggaaaat tagaagctgc gagaagtggg gaaaaacaca tcattgatat
     1381 cgttcacctt cttggagtgc ttgagcatag aaaagctgcc cctatggata ttgttaaaac
     1441 tttcaattcc aaagaacgct tgcttctcta taattgcttg agtgatggat ttgatccaca
     1501 tgtatgtaac acaagggtca atattggtcc aactggaaca tacgtacgat ctttacgatc
     1561 agaattgcat aatcgagcct attaatttta ttttttcaca aacttagggt acgttccact
     1621 tcccaccgta ttataaagaa tttgtacatt cttatttaat gtatttgcaa tcgagataat
     1681 tttttaaatt acaacacgtt tcagcatatc atgacaaacc cagaagaaga aaatgcattg
     1741 gaacgctatc ggctcattat tacaatagtt ggagagtatg cgaacgaaaa aaagggcatg
     1801 tatatcaaac ttattagtga tctcgtctcc tactgtgcag aatatgtacg catcattatc
     1861 gaagtggagg cattcactca gtttgggcgt catgcactag aaaccaaagt ctatcaaaaa
     1921 gagatgatcg agtatgataa acgaagaaaa attgcacatg aagcacttct ttcgcaactc
     1981 tatattgtca accgtgcatt gctcaaagag gaacttttga agggtaaagt gcccattggt
     2041 ggtatttatt ctcttaaccc agatacgatt cgggacagga actcagtgag cgactgggct
     2101 gggtacctag taaaggcctt ggcacgccga ggatttgtga aattaaagcg atagaagcat
     2161 ttataaatga attattagct acacccactt atggtagaga ttacttcaca atggttgagg
     2221 gcattagata tcttatataa tgatcagaca gactcaggaa aaagatgtgc tgcgcaaatt
     2281 cttgaagttt ctgctcgata cattaacttg cttgcgaaag acacagttga ctcagatgtt
     2341 ggtaggctcg gatgtttcaa aagaggaaca tctcttgatg aagaagtaga agcatctttc
     2401 gtgagcttac aagatgtaat gaaacataca aatcagtacc ttgcatcaat tggtgtagaa
     2461 aaagcctttc cagaaaaagg aagagaacat ctgtaccaaa tagcgaataa tgtcgtgaca
     2521 cggttttacg aagcacggat taaataatta ttcttttttc acaaacttag ggtacgttcc
     2581 ccgttccata aagactttag tttctgcaac tgcaatgcca cgttcttgca tcagcatgtt
     2641 ttgcgcgttc atccgtgcag tgccaatggc aataagttcc cctttcaacg acaacaacgc
     2701 aacagggtct ccaacttcaa tcccactctc tagttttgca atcccaggca cggataaaaa
     2761 tgcaccgtgg cagatagcat cgactgcgga gtcaaacagc cagaccttcc caatatgttc
     2821 cactgctgtt tccattggta agattatctt tcttagctct gtctcgtttc cctgcttcca
     2881 gtcttcatac gcgtccttga gat
//
LOCUS       DATDZU010000095         2175 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_121733, whole genome shotgun sequence.
ACCESSION   DATDZU010000095 DATDZU010000000
VERSION     DATDZU010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121733"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1314
                     /gene="proS"
                     /locus_tag="VJJ79_03065"
     CDS             <1..1314
                     /gene="proS"
                     /locus_tag="VJJ79_03065"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HLC22729.1"
                     /translation="IRPRGYNIWETIQSEFDKRIKKLGVKNAYFPLFIPETFFEKEKS
                     HAQGFAPEVAWIANKYEGERIAVRPTSETVICDSFKRWVRSHRDLPMRINQWCNVVRW
                     ETEATKLFLRTREFLWQEGHCVYSTEEECEKEVLMFLDEYEKLLKDVLAIPIIKGKKT
                     EKEKFAGAKNTYTMESFMPDGKALQSGTSHNLGQGFMKSFGVSFVGEDEKPHIPYSAS
                     WGISTRLIGALVMLHSDNKGLVLPPKVCANKIVIVPIVFEKSKKEILEYAKKVRHLVS
                     DYHPLFDDRDEHTPGFKYSEWELKGIPLRIEVGPKDFEKNQVVIVRRDTGEKEFVMFD
                     KIQERVPAILEKMHHDLYSKALQHLKNSVKEGGTWEDFTNIIADAKLAKMPHCLDMKC
                     EEAVKTKTAGVTSRCIPFENNKLNAKKCFACSQDAKAMVLFGRSY"
     gene            complement(1316..2038)
                     /locus_tag="VJJ79_03070"
     CDS             complement(1316..2038)
                     /locus_tag="VJJ79_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22730.1"
                     /translation="MTAYNGYLRTGTDGQLTVDLASLFKFGGVTSVMHRDPQKRLVQN
                     LKNLQDRLVLDDIPVEDSPPHKITSGIAAYRQIPEKATGSDGKNCTLLECVYGESTSF
                     GSLMGRHIAISSETSSTPRLPHSVRLNDYHDHLREVLHMALVWHILNKFPEQYVAEIN
                     HDSKRTVGYSRAFILDRADGARETDNGKLEYVGKMLDSGLFVVLHDVSIKTDLATPEG
                     SSKFFIALNTAFGEGHLDSHPK"
BASE COUNT          687 a          401 c          468 g          619 t
ORIGIN      
        1 attcgccctc gaggttacaa tatctgggaa actattcaga gtgagtttga taagagaata
       61 aaaaagctcg gcgtgaaaaa tgcttacttt ccattgttta ttccagaaac cttttttgaa
      121 aaagagaaaa gccacgccca aggatttgct cccgaagttg catggatcgc aaataagtac
      181 gagggagaaa gaattgcagt acgcccgact tctgaaactg tcatttgcga ttcgttcaaa
      241 cgatgggtga gaagtcatcg tgatttgccc atgcgcatca atcaatggtg caatgttgta
      301 cgatgggaaa cggaagcaac aaaacttttc ttgagaaccc gtgagtttct ctggcaggaa
      361 ggtcattgtg tgtacagcac ggaagaagaa tgtgagaaag aagtgttaat gttccttgat
      421 gagtatgaaa aattgttaaa agacgttctg gctattccta ttattaaagg aaaaaagacg
      481 gagaaagaaa aattcgctgg ggcaaagaac acgtacacga tggaaagttt catgcccgat
      541 ggtaaagcat tgcagtcagg gaccagccat aatcttggtc aaggttttat gaaaagtttc
      601 ggtgtctcct tcgtcggaga agatgaaaaa cctcacatcc cgtatagtgc aagctggggc
      661 atttctacac gcttaatcgg agcactagtg atgctgcact ctgataataa gggattagtg
      721 ttacctccta aggtgtgtgc aaacaaaatt gtgattgttc cgattgtgtt tgaaaaatca
      781 aaaaaagaaa ttttggagta cgcaaaaaag gtgcggcatt tggtatcaga ttaccaccca
      841 ctttttgacg atagagatga acacacgcca ggctttaagt attctgaatg ggaactgaaa
      901 gggattcctt tacgaattga agttggaccg aaagattttg agaaaaatca ggtcgttata
      961 gtgagaagag atactggtga gaaagaattt gtgatgtttg ataaaatcca ggaaagagtt
     1021 cctgccattc ttgaaaagat gcatcatgat ttatactcca aggcactgca gcatttgaaa
     1081 aattctgtta aggaaggcgg aacatgggaa gattttacaa acataattgc tgatgcaaaa
     1141 ttagccaaga tgccgcactg cttggacatg aaatgcgaag aagcagttaa aacaaaaacg
     1201 gcaggagtta cttcacgctg cattcctttt gaaaataata aattaaatgc aaaaaaatgc
     1261 ttcgcttgtt ctcaagacgc caaagcaatg gtgctgtttg ggagaagtta ctaacttatt
     1321 tcggatgact atccaaatgt ccttctccga aggccgtgtt gagtgctata aaaaatttgg
     1381 atgaaccttc tggggttgcc aaatccgttt ttatagaaac atcatggagt accacaaaaa
     1441 ggcctgagtc tagcatttta ccaacatatt ctagttttcc attatcggtt tcccttgcac
     1501 catctgctct gtctaaaata aaagctctgg aatagccaac cgttctttta gaatcatggt
     1561 tgatttctgc gacatactgt tctggaaact tgttaagaat gtgccataca agagccatgt
     1621 gaagaacttc tcttaaatga tcatgataat cattaagtcg aaccgagtgt ggcaatcgag
     1681 gagtagaact ggtttcagac gatattgcaa tgtgcctgcc catcaaacta ccaaatgaag
     1741 tactctcgcc atacacacat tcaagaagtg tgcaattctt gccatcagat cctgttgcct
     1801 tctctgggat ttgacgataa gcagcaatgc cagaagtaat tttatgaggt ggagaatctt
     1861 caactggaat gtcatccaat acaagacgat cttgtaaatt tttaagattt tgaacaagtc
     1921 ttttttgagg atcacgatgc atgacacttg tgactcctcc aaatttaaaa agagatgcca
     1981 gatccacagt taactgccca tcagtccctg ttcttagata cccgttatat gctgtcattc
     2041 gtcttcacct ttatttcttc acttaactga aacgtgatgt accaaaattt gtttttcttg
     2101 aagaaggatc tccgccatta gcatattttt gaagttcttc gggtattcca tttgtgacat
     2161 cataccatct gaatg
//
LOCUS       DATDZU010000096         7229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_435587, whole genome shotgun sequence.
ACCESSION   DATDZU010000096 DATDZU010000000
VERSION     DATDZU010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7229
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435587"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VJJ79_03075"
     CDS             complement(<1..261)
                     /locus_tag="VJJ79_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22731.1"
                     /translation="MATCEMCGYPGNVQEAIVEGAVLFLCHKCLQYGDAIELKKPSAS
                     VVEQRLAFMKRTHSYLPSVEEEAIVRDYAHRVKKAREKLTLSQ"
     gene            405..1787
                     /locus_tag="VJJ79_03080"
     CDS             405..1787
                     /locus_tag="VJJ79_03080"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22732.1"
                     /translation="MQKRILLVFPPYSMKERYHNDVGENIGGHLPPLGLCYIAAYLEK
                     HGHEVEIMDCPAHHYTIEDVLKRIRKFQPDIVGLAAVTILVDRAVEITKAIKNQFSEV
                     TVIIGGPHPTEMPEETLSVTGCDIVIKGEAEYAFLDIVNETEKNKQQKIVQGRMVENL
                     DDIPMPARHLVDMSKYSALPNSYKVSENVIQVMTTRGCPYTCTFCADANGRFRRRSVE
                     KVIAEIKHLQEVYGTKEIAFWDDVFTLNKKWVLEFCKAVEQEKITLAWSCYSRVDAID
                     EDIVTAMAKAGCWNMFFGLESGNQELLDNIKKRITLDMTRKAVAIVKKAGIEVRGSFI
                     LGLPGETPEMGKKTIDFAIEVDPDYAQFSIATPFPGTELYETVDKWGTMNHNYKDFHI
                     FVPVFVPKGYKDAQELHNMQRLAFKKFYFRPKYMLKRATKIKNMRDVRRHVKGLQMVL
                     GMSGLKSGTE"
     gene            1819..2694
                     /locus_tag="VJJ79_03085"
     CDS             1819..2694
                     /locus_tag="VJJ79_03085"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLC22733.1"
                     /translation="MRVIITIPAYNEEATIGKVISEIKEVMKKTKYRYKIIVLNDGSR
                     DTTKEVAEKAGATVYSHRRNKGLAETFKSEMEYCLKEMADIIVHTDADGQYPALYIPK
                     LIEEVEQGTDIVLGSRFSGHIESMPLIKRFGNIAFAKVFTQLTKTTITDSTTGFRAFT
                     REVAASIRYTTDFTYTQEQLIRAARQKFTIKEISIQARKTRESRLMKGPFDYAIKAWI
                     NIIRIYRDYNPLAFFGKIGIVFLTMGTLLGLAIIYNVLTQGITGGTPRVILSALFILV
                     GIQIILFGLLADMKK"
     gene            2704..4188
                     /locus_tag="VJJ79_03090"
     CDS             2704..4188
                     /locus_tag="VJJ79_03090"
                     /inference="COORDINATES: protein motif:HMM:NF021635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-pyruvoyl-tetrahydropterin synthase-related
                     protein"
                     /protein_id="HLC22734.1"
                     /translation="MRTSDKIFLLPVIIFSLNLLYRLVDASKLITTFPLDYVNDLASY
                     LAMVHFFDVYGFLQEVPNWFNGFILFNTYPPGWAVYTYFFYKVFGNLLLATYISTISL
                     YILGFIAVYLIGKELRISLVKRLALFLFVFANPMLIGAVLKQGRLPSFMALVIFTYLV
                     YIALYFKERQVNWKIVFLGLIFVLLILTHQPETVLSGVFLLGIFLVKKWKERIVIATV
                     LFCSVLVSSFWLIPFLYYTFTLNFLNIGFANWLLNFKGYFWNNLIGIILSASFFVLFY
                     LYYWQRPTRTTLLFFAPVLVLNFLYLTRLIVFVPILKFIYPDPFNDFLMFFVALFLVS
                     IRYRELRRFIKISIACALILFSIMGIWYNMTQTPFFVEHSEEDEHFIELIQKVEGKYI
                     FMATELPDSYPSAYAAYAAIYYNKSTIHGWGEMFKEYEYTHRLEEYLVAYFEKHNCQP
                     LLPLLAEYNATEILTHKEDCSYFIEECGLIEKARSGDACLLKIP"
     gene            complement(4185..5030)
                     /locus_tag="VJJ79_03095"
     CDS             complement(4185..5030)
                     /locus_tag="VJJ79_03095"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLC22735.1"
                     /translation="MSSLVSSYAVFENYTLMKCQSCGLLFTDQQSVKQSSLYSKDYFS
                     GVHANFFADCTIGYEEKIAMSGKLQNFHTVLKKIKHIKPEGTFLDVGSATGIFLDMAQ
                     KEGYAVVGVDVSEYACTYAREHFGIDARCGKLEDLRLKEKQFDVITMWDLLEHVPDPR
                     AFLHEVRRLLKDDGVMFILTVNDSSLMGWLADGIYIGSFKMIPYFTRLIHPIHHNYHF
                     KEKHLLRYLEEAGFSVVWKQKSEMPIQNIEAGSAVKTLARILYFFSETLHLQHEIRLL
                     ANKKS"
     gene            complement(5074..6060)
                     /locus_tag="VJJ79_03100"
     CDS             complement(5074..6060)
                     /locus_tag="VJJ79_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22736.1"
                     /translation="MHTHFICRHYVDGKETLEELASRISLFYTVPQLSRKHGDQFSFG
                     LKLTLDPHTSDEVRYGVKQLLFFLPSDCWLLYDTAARRPGTSLSQVLFNPMFYTPPSI
                     VVNADLDQFVLDTADGFGTAYELVRKVFVDNALLGIGARDVPVVLARDPFNSRLRIIH
                     ELFQSLALGPEKVRASEQRENITPAYAAFGDHGSGFYVMNTFHPMYPDLLRSVAHASR
                     VSHIHEIPMDFYIVAKAIQYEAPIVASYVRARENKFYKPLSKNEEFAWVHRFVTHHTQ
                     ELTKTDVAPMLLEVIKGSRRNYVDDLVAYYSRDLVNEVRCWMYDALTRVQKF"
     gene            6160..>7229
                     /locus_tag="VJJ79_03105"
     CDS             6160..>7229
                     /locus_tag="VJJ79_03105"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLC22737.1"
                     /translation="MDMHKKEIEITVTETKEKTQTAIQKVAFVYLKMENTSYCLTDDI
                     GYSALRRPQLGLQYMCAVLEKKGIQTEIFDQTVSDFDFEWLYNQLKECDLVGFSCSDA
                     QEGKVKNYCVILKDKLGIRTLVGGPSTFGNSSFVDFGCDFVIHGEAEVTIQQIVDYFN
                     GEKKLEDIKGVSYKKDDEIVLAQPQEQVKNLDDIPFPDRSKVDINAYYDYFLFGMRKP
                     YITMTASRGCIYRCSYCSSPTIWSFKDRRRSVDNVIAEIDDVVEKYQVKYIAFQDDIF
                     GITPDWIEDFCTKLIKKPYKVRWMAILHPLTLKGNTAEIEKTLRLMRQAGCDTLSFGL
                     QSADPQVLKNINRLQQEPEQLK"
BASE COUNT         2306 a         1529 c         1469 g         1925 t
ORIGIN      
        1 ttgggacaga gtgagctttt ctctggcttt cttgacacgg tgagcataat ctcttacaat
       61 cgcttcttct tctaccgacg gcaagtatga atgggtccgt ttcatgaatg caaggcgctg
      121 ttcaaccaca gacgcagacg gctttttaag ctcaatagca tcgccatatt gcaaacactt
      181 atgacaaaga aaaagaacag ccccttccac tatcgcttcc tgcacatttc caggatatcc
      241 acacatctca caggttgcca tgtcataata attcactcta aagtttaaat attttctcgg
      301 actagagact tggtttaata acccggaaaa ttaataagat agctaaataa aaatgctttg
      361 caacagcata agatataaaa ggagttcata acaaggaaga taaaatgcag aaaagaattt
      421 tattggtatt tccaccatat tccatgaaag agcgatacca taatgatgtc ggggaaaata
      481 ttggtggtca cttacctcct ctggggctct gttacattgc agcatatttg gaaaaacacg
      541 ggcatgaggt agagatcatg gactgccctg cacatcatta caccatagaa gacgttctaa
      601 aaagaattcg aaaattccag ccagacatcg taggccttgc agcggtaaca atcctcgtcg
      661 accgtgcagt ggaaattaca aaggcaatta agaaccaatt ctcagaagta accgttataa
      721 ttggaggtcc acatcctaca gagatgccag aagaaacatt gagcgtcact ggctgcgaca
      781 tcgtcatcaa aggcgaggca gagtatgcat tcttagatat cgtcaatgaa acagaaaaaa
      841 acaagcagca aaaaattgtg cagggaagaa tggtagaaaa tctcgacgac attcccatgc
      901 cggctcgcca tttagtagac atgagcaagt acagtgcact gcctaactct tacaaagttt
      961 cagagaatgt gatccaagtt atgacgacgc gtggctgtcc gtacacatgc acattctgcg
     1021 cagatgcaaa tggccgcttc cggagaagaa gcgtcgaaaa agtaattgcg gagattaaac
     1081 atctccaaga agtctatgga acaaaagaga tcgcgttctg ggacgatgta ttcactttaa
     1141 acaaaaagtg ggttttagaa ttttgtaaag cggttgagca agaaaagata acgcttgcat
     1201 ggagctgtta ttcccgcgtg gacgcaattg atgaagatat cgtcactgca atggcaaagg
     1261 caggatgctg gaacatgttc ttcggcctgg aatctggaaa ccaggagcta ttagacaaca
     1321 tcaagaaacg aatcacgctc gacatgacaa ggaaagcagt tgctatagtc aagaaagcgg
     1381 ggattgaggt gcgtggatca tttatcctgg gattaccagg agaaacacct gaaatgggaa
     1441 agaaaactat agactttgca attgaagtcg atccggatta tgcgcaattt tccatcgcga
     1501 cgccgttccc tggcacggaa ctctacgaaa ctgtcgacaa atggggaacg atgaaccata
     1561 attacaaaga tttccatatt ttcgtccctg tatttgtgcc aaagggatac aaggacgcac
     1621 aggagctgca caacatgcaa cgactcgcat tcaaaaaatt ctacttccgc ccaaagtata
     1681 tgttgaaacg agcaacaaaa attaagaata tgcgcgatgt cagacggcac gtaaagggac
     1741 tacaaatggt cctaggcatg agcgggctca agtcaggaac tgaataaagc ttttaaatgg
     1801 cttaaaaatt ttctctgtat gcgtgtaatc ataaccattc ctgcatacaa cgaagaagca
     1861 acaattggaa aagtcatttc tgagattaaa gaggttatga agaaaacaaa gtatagatac
     1921 aaaatcattg tgctgaacga cggaagtagg gatacaacaa aagaagttgc agaaaaagca
     1981 ggcgcaacgg tctactcgca tcgacgaaac aaaggccttg cagaaacgtt caaatcggaa
     2041 atggaatatt gtctcaaaga gatggcggat atcattgtgc acactgacgc tgatggccaa
     2101 tatcctgcat tatacattcc aaaacttatc gaagaagtcg agcaaggaac agacattgta
     2161 ttgggaagca ggttctcagg acacatagaa tcgatgccat tgatcaaacg cttcggcaac
     2221 attgcatttg caaaagtctt tacgcagctc acaaaaacaa ctattacaga ttcaacaacg
     2281 ggttttcgtg catttacgag agaagttgct gcgtctatca gatacacaac agactttacg
     2341 tacacgcaag aacaactgat ccgcgctgca cgacagaaat ttacgataaa agaaatttcg
     2401 attcaagcgc gaaagacacg tgagagtcgt ctgatgaaag gaccatttga ctacgcaatc
     2461 aaggcatgga ttaatatcat taggatatac agggactata atcctttagc attttttgga
     2521 aagattggca ttgtttttct cacgatggga acacttcttg gtctcgccat catttataac
     2581 gtgctgacgc aaggaatcac tggcgggaca ccacgagtaa ttctttctgc actgtttatt
     2641 ctcgtcggaa tacagattat tcttttcggc ctacttgcag acatgaaaaa ataaggataa
     2701 aaaatgcgca cttccgataa aatatttttg cttccggtta tcatattcag tttaaatctt
     2761 ttatataggc ttgtagatgc atcaaaactt atcacgacgt ttccacttga ctacgtaaac
     2821 gatcttgcct cgtaccttgc aatggtacat ttctttgatg tatacggatt tctacaagaa
     2881 gtcccaaact ggttcaacgg atttattctc tttaatacgt accctccagg atgggccgtt
     2941 tacacatact ttttttacaa agtatttggc aacctgctcc ttgcaacata catctctacg
     3001 ataagcttgt atatccttgg attcattgcg gtttatctta tcggaaaaga gttgcggatt
     3061 tctttagtca aacgccttgc actttttttg ttcgtgtttg caaaccctat gctcatcggt
     3121 gccgtgctga agcaagggag acttccatca tttatggcgc tcgttatttt tacgtatctc
     3181 gtctacatag cgttgtactt taaggagagg caagtcaact ggaagattgt atttcttggg
     3241 cttatttttg tactgttaat cctcacgcac caaccagaaa ctgtgctcag cggcgtgttc
     3301 cttctcggca tttttctcgt gaagaagtgg aaagaaagaa ttgttattgc aacagtcctt
     3361 ttttgtagcg tgcttgtttc tagtttttgg ctgatcccat ttctgtacta cacattcaca
     3421 ctaaactttc taaatattgg atttgcaaac tggctcctta atttcaaggg ctatttctgg
     3481 aacaatctca taggcatcat tctttctgca agcttttttg tgctatttta tctgtactac
     3541 tggcagagac caacaaggac aacactcctc tttttcgctc cggtgcttgt gctcaatttt
     3601 ttatatctaa cgcgcctcat tgtttttgtc ccaatcctta agttcattta cccagatcct
     3661 ttcaacgact ttttaatgtt ctttgtggca ctcttccttg taagcatccg ttatcgtgag
     3721 ctgcgtcgtt ttataaaaat ttcgattgcc tgcgccctca tcctgttttc cattatggga
     3781 atatggtaca atatgacaca gacaccattc tttgtagaac attctgagga agatgagcat
     3841 tttattgaac tcatccaaaa agtagaaggg aaatatattt ttatggcaac ggagctgccg
     3901 gacagctacc ctagcgcata tgccgcctat gctgcaatct actacaataa atcaacaatc
     3961 catggatggg gcgagatgtt caaagagtac gagtatacgc atcgtttaga agagtatctc
     4021 gttgcgtact ttgaaaagca caactgccaa ccgctccttc ctcttcttgc agaatacaat
     4081 gcaacagaga ttctgactca taaggaagac tgttcatatt tcatcgaaga gtgcggcctt
     4141 atagaaaaag cacggtctgg agatgcgtgc ctcctcaaaa taccttaact ttttttattg
     4201 gcaaggagcc taatctcgtg ctgcagatgc aatgtttctg agaaaaaata caaaatacgc
     4261 gctaacgttt tcacagcaga acctgcttca atattttgaa taggcatttc acttttctgt
     4321 ttccagacga cagagaagcc agcctcttcc aggtaccgta gcaaatgctt ttctttgaaa
     4381 tgataattat ggtgaatagg atgaatcaga cgtgtgaagt acggaatcat cttgaaactt
     4441 cctatatata ttccatcggc gagccacccc atcaagctcg aatcgttaac cgttaaaata
     4501 aacatgacac catcatcttt gagcaagcgc cgcacttcgt gaagaaacgc tctaggatca
     4561 ggcacatgct cgagaaggtc ccacatcgta atcacatcaa actgtttttc tttgagccta
     4621 aggtcttcca gttttccaca gcgcgcatca ataccaaaat gttctctcgc ataggtgcac
     4681 gcatattcag aaacatccac accaacaaca gcgtaccctt ctttttgtgc catgtcaaga
     4741 aaaatacctg tggcagagcc tacgtctaaa aatgttcctt ctggtttaat gtgtttaatt
     4801 tttttgagga cggtgtgaaa attctgaagc tttccactca ttgcaatttt ttcctcgtag
     4861 ccaatagtac aatccgcaaa aaagtttgcg tgcacgccag agaaataatc tttagaatat
     4921 aatgaacttt gtttgacaga ctgctggtca gtgaaaagca acccgcagct ttggcacttc
     4981 atcagtgtgt aattttcaaa gacggcgtag gaggaaacaa gagaactcat acaaaggtta
     5041 cacagcattg ccctaaataa aaaaagagac tttttaaaac ttctggactc tagttaaagc
     5101 atcatacatc cagcagcgaa cttcattcac aaggtcacga gagtaatacg caacaagatc
     5161 atcgacatag ttccttcgtg aacccttaat aacctccagt agcatcgggg caacatcagt
     5221 ctttgtaagt tcttgagtat gatgagtcac aaagcgatgc acccaagcaa actcttcatt
     5281 tttgcttagt ggcttgtaga atttattctc gcgtgcacgg acataagaag caacaatagg
     5341 agcttcgtac tgaattgcct tagcaacaat gtaaaagtcc attggaattt catgaatatg
     5401 cgaaacccgt gacgcgtgcg caacactgcg aagaagatca ggatacattg gatgaaacgt
     5461 gttcatgaca taaaagccac tgccatgatc cccaaacgca gcataggcag gcgtaatgtt
     5521 ctcccgttgc tcagatgcac ggaccttctc gggaccaagt gccaaagatt gaaagagttc
     5581 atgaataata cgaagcctgc tattaaatgg gtcgcgggcg agaacaacag gaacatctct
     5641 ggcaccaatc cctagcaatg cgttatcaac aaacactttt cgtacaagct cataagcagt
     5701 tccaaaacca tccgcagtat caagaacaaa ctgatctaga tccgcgttca caacaatgga
     5761 aggaggagta taaaacatcg gattaaaaag tacttgactt aagcttgtgc ctggacgacg
     5821 agcagcagta tcatataaaa gccaacaatc tgaaggaaga aaaaatagta gctgcttaac
     5881 accataacgg acttcatccg aagtatgtgg atccagagta agtttcagac caaaggaaaa
     5941 ttggtcgccg tgctttcgtg acaactgagg aacagtatag aagagggata tacgagaggc
     6001 gagttcctca agcgtttcct ttccatcaac ataatgccgg caaatgaaat gcgtatgcat
     6061 aaaactatga gttaaataat catcatatat aaagattctg aaaatataca ggaaaattaa
     6121 gaaaaactta taaataatta aaaggtaatt attttttcta tggacatgca taaaaaagaa
     6181 atagaaatca cggtaaccga aacaaaagaa aaaacgcaaa cagcaatcca aaaagtagca
     6241 tttgtctacc tcaagatgga aaataccagt tactgtctaa ccgacgatat aggttacagt
     6301 gcattacgcc gcccgcagct cggtcttcaa tacatgtgcg cagttctcga aaaaaaaggt
     6361 atacaaacag aaatttttga ccagacggtt tccgattttg atttcgaatg gctctataac
     6421 caactcaagg aatgtgatct agtcggcttc tcatgctctg atgcacagga aggaaaagtc
     6481 aaaaattatt gtgtcatact taaagataaa ttagggattc gcacactcgt cggtggtccc
     6541 agtacgtttg gaaactcctc gtttgtcgac ttcggttgtg attttgtgat tcatggagaa
     6601 gccgaagtta caatccaaca aattgtagac tactttaacg gcgaaaaaaa actggaagat
     6661 atcaaaggag tttcatacaa aaaagatgat gagatcgtcc tcgcgcaacc ccaagaacaa
     6721 gtcaagaact tagacgacat tcccttcccc gaccgctcaa aagtagacat caacgcctac
     6781 tacgattact ttctttttgg tatgcgaaaa ccgtatatca ctatgactgc atcgcgcggt
     6841 tgcatctacc gctgctcgta ctgcagttca ccaacgattt ggagctttaa ggataggcga
     6901 agaagtgttg ataatgtaat tgcagagatt gatgacgtcg tggaaaagta ccaagtgaaa
     6961 tatattgcat tccaagatga catctttggc atcacgcccg actggattga agacttttgc
     7021 acaaaactaa tcaagaaacc atacaaagta cgatggatgg caatcttgca cccgctgacg
     7081 cttaaaggaa atacggcaga aatcgaaaaa acattgcgac ttatgaggca agctggctgt
     7141 gacacgcttt cgttcggcct tcaatctgcg gatccgcaag ttcttaaaaa tattaaccgc
     7201 ttgcaacaag aaccagagca attaaaaaa
//
LOCUS       DATDZU010000097         4677 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1383274, whole genome shotgun sequence.
ACCESSION   DATDZU010000097 DATDZU010000000
VERSION     DATDZU010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4677
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383274"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VJJ79_03110"
     CDS             complement(<1..422)
                     /locus_tag="VJJ79_03110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLC22738.1"
                     /translation="MRIAMVSTFYAPTIGGVEKVIEELATRYVQQGHHVDIFCSDSDK
                     HQRLQKKVEIIDGVHVHRSRYWLKLSLNTYIFPGVIWDLLWQKYDVVHSHVSAHDYML
                     FSGIIAFLKGKPHVHTTHCPWTDKFRPLSVRIPLFFTD"
     gene            complement(489..1208)
                     /locus_tag="VJJ79_03115"
     CDS             complement(489..1208)
                     /locus_tag="VJJ79_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22739.1"
                     /translation="MIINTYPTLVALLLSACTVNKPCTVEGIVLEENSSSVDDTGQPL
                     PVDDTGRDTGYDTSSFDTGDSSSFDTAFYDTGSFDTSVYDTGAHDTGSFSDVHDSDVV
                     IETGVSRDTGVYDPVDTGSVSPSDSGVDHGSLDTGYSPEQWCTASTVPESVPFVMLLP
                     KHYALVDSDEYFETNTGSRNTLVLEDSVYTREDTYGCSCERILDCKPSTALTGEYLYG
                     CTEGTMKDWVAQRGWADNCSE"
     gene            complement(1410..1541)
                     /locus_tag="VJJ79_03120"
     tRNA            complement(join(1410..1455,1487..1494,1512..1541))
                     /locus_tag="VJJ79_03120"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1488..1490),aa:Ser,seq:tga)
     gene            complement(1573..2160)
                     /locus_tag="VJJ79_03125"
     CDS             complement(1573..2160)
                     /locus_tag="VJJ79_03125"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HLC22740.1"
                     /translation="MSHYYTKEQETPFHITKIHAVLNGKEYEFFTAPGVFSKDKVDFG
                     TKLLSEHFIVGKQDTVLDLGCGIGILGRVAAEHTEEQVILVDVNPRAVQLARMNTKHF
                     SNTEVMESDAYYALKGMQFDVILLNPPQTAGKKLCFAMIADAKHHLKKGGNLQVVARH
                     NKGGASLSAHMKEVFGNVETIVKRGGYRVYISRLE"
     gene            complement(2157..2771)
                     /locus_tag="VJJ79_03130"
     CDS             complement(2157..2771)
                     /locus_tag="VJJ79_03130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22741.1"
                     /translation="MTRDWVGFVLLFFLGVLLAVGGYFFFASPNTGVLDNYQYSNGET
                     VFDVQKVNEIETYITLLVGLPSQHKYTIALRNDPASLEYIPVYGTLNTRIFNDEDDYI
                     TINPYANLTAKTTIAALEIDKIIDNSRLYGVPVHSAMTEPYEDYPVKTCRDGTDTSTI
                     IYLSLGSETTVYTENNCIIIVGTDEDELIRAADRFVYTLLGVMQ"
     gene            complement(2761..3342)
                     /locus_tag="VJJ79_03135"
     CDS             complement(2761..3342)
                     /locus_tag="VJJ79_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22742.1"
                     /translation="MKDPLYIEKKEVWYKQKKFLTIALGIFLISIMVLSAVNLNTDAE
                     EEVTYGGHTFVQTSFGWQTYLDSGQQLFLTTNPEDLASVFVPAVDFSRFSTLQKVYVG
                     VNMYDDVQPAVYDLQRDISLPAQTDIACYEDNDLCANYPLKTCEDASFTVGVIQLQQA
                     NETLVQQKGNCLLIQGKDLLMLTDKLILDYYDA"
     gene            complement(3413..>4677)
                     /locus_tag="VJJ79_03140"
     CDS             complement(3413..>4677)
                     /locus_tag="VJJ79_03140"
                     /inference="COORDINATES: protein motif:HMM:NF016980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S-layer protein"
                     /protein_id="HLC22743.1"
                     /translation="NDFVYNDMDSGAKVVGECIALPNDYVKICLNSLTVSEDDYATYT
                     FEFDTSVGLDDTFLTNTSVPGLHLSTSATEGFELRAYTASNNVSANETATKKAKDVWL
                     YTPGGAERFANGSNGTHNAADVSVANMAKWVGVFYKDTSASKVKLFGEVDARTSDVEI
                     LRLNFGNTKDTNIVLYTQGPSGANQNADGGVRINVTLDITSDDSGWPGEMDDIQMAWG
                     LAAANGSFDSLGDTRSTEEASELLWGNAALPLSIGTKDEDHRSAYGIVIKNPKSNGAS
                     DQLELSVPSDQVKANVVIEGTSTTVSSGGVSYVPAEVSPVTKLASEVSSASDYQLIVV
                     GGPCANDLAAELFDVSCDGWSFQEGEAVLKLVDNGDKVALLVAGTTATDTRRAAKALA
                     AWETYELSGTEMVVSGTSLSDISVAAAV"
BASE COUNT         1334 a         1121 c          951 g         1271 t
ORIGIN      
        1 ctatccgtaa aaaaaagagg aatgcgcacg ctcaatggcc taaacttatc cgtccatgga
       61 caatgcgttg tatgtacgtg cggcttccct tttaagaatg caatgattcc ggaaaacaac
      121 atgtaatcat gcgcggagac atgcgagtgc acgacatcgt acttctgcca gagcaggtcc
      181 cagataactc cgggaaaaat atacgtgttc aaagaaagtt ttaaccagta tcgtgaacga
      241 tgaacatgaa caccgtcgat aatctcaacc tttttttgca ggcgctggtg cttgtcagaa
      301 tcagaacaga aaatatcgac gtgatgccct tgttgcacgt agcgcgtggc aagttcttca
      361 atgactttct cgacgccgcc gatcgtaggg gcataaaacg tgcttaccat tgcaatgcgc
      421 atacaaccga agctgatgct ttcttttata tgggttatgg aagataaata aatgataaat
      481 agaaaaaatt attcagaaca attatctgcc cagccgcgct gcgcaaccca atccttcatc
      541 gtcccttccg tgcatccata gagatactcg cccgtcagcg cagtgctcgg cttgcagtca
      601 aggattcgtt cgcacgagca accatacgta tcttcgcgcg tgtagacgct gtcttcaaga
      661 acaagggtat tgcgagagcc tgtgttggtt tcaaagtatt cgtcgctgtc aacaagtgca
      721 taatgcttgg gaagcaacat gacgaaggga acagattctg gaaccgtact tgcagtgcac
      781 cattgttctg gagaatatcc tgtgtccaga gagccatggt caacgccgct gtcagaaggg
      841 ctgacgcttc cggtatcaac aggatcatat acccctgtat cacgcgaaac gcctgtctca
      901 ataacaacat cgctatcatg cacgtcagag aaagagccgg tatcatgggc accagtgtca
      961 tacacactcg tatcaaaaga accagtatca tagaatgcag tatcgaaaga actgctatcg
     1021 ccggtatcaa aagaagaagt gtcatatcct gtgtctcttc ccgtgtcatc gacaggcaac
     1081 ggttgaccag tgtcgtccac tgaagaacta ttctcttcaa gaacgattcc ttcaacagtg
     1141 caaggtttat tcacagtgca tgcggaaagg agaagtgcaa ctagtgttgg atatgtgttg
     1201 attatcatca cttgaaataa aaacaagaga tatataaatg ttacgacagt aaaaaaataa
     1261 tttatggaga agcaggagtt accgaaacct tcttcttgcg gaagaaccag taccaaccac
     1321 caaccacgac aacgcaacaa tgcattattc cttcaagaag aaagttttct atctgctacg
     1381 gccgttattt ttcatcataa caataaaaac gccgggactg ggattcgaac ccagaaatcc
     1441 ttgcggaaac aggctgtctc aggtacctct gctcgaggct tacgctctca aggcttacgc
     1501 tcttggatga tctgcgcagt accaggttgt gccaccccgg caaggagaat gaaaactttc
     1561 attatttata tattattcta aacgagaaat atacacgcga tagccacccc ttttcactat
     1621 cgtctcaacg ttcccgaaca cttctttcat gtgcgcacta agcgaagcgc cccctttatt
     1681 atgccgcgca actacttgca agttccctcc ctttttcaaa tggtgtttgg cgtcagcaat
     1741 cattgcaaag cacagctttt ttccagcggt ctgtggcgga ttaagaagga tcacgtcaaa
     1801 ctgcattcct ttcagcgcat agtatgcatc actttccatg acttccgtat tactaaagtg
     1861 cttcgtgttc atccgtgcaa gctgtacggc acgtgggtta acgtccacaa ggattacttg
     1921 ctcttcggtg tgctctgcag caacgcgtcc aaggatacca atcccgcagc caaggtctaa
     1981 gacagtatcc tgttttccga cgataaaatg ttctgaaaga agttttgtcc caaagtctac
     2041 tttgtcctta gaaaaaacac cgggcgcggt aaagaattca tattcctttc cattcagcac
     2101 tgcatggatt ttagtgatat gaaaaggagt ctcttgttct ttggtgtaat aatggctcat
     2161 tgcataacgc ccaagagggt atacacaaaa cggtctgcgg cacggatcaa ttcatcttca
     2221 tccgttccaa cgataatgat acaattattt tcagtataga cagttgtttc tgatcctaga
     2281 ctaaggtaaa taatagtcga cgtatcagtt ccatccctgc acgttttcac tgggtaatct
     2341 tcgtacggtt ccgtcattgc actgtgcaca ggaacaccat acaatctgct gttatcaatg
     2401 attttatcaa tttcaagagc agcaatggtt gttttcgcgg tcaggtttgc atacgggtta
     2461 atcgtgatat aatcatcttc atcattaaat attctagtat ttagtgttcc atagacagga
     2521 atatattcca atgacgcagg atcattccgc agggcaatcg tgtacttgtg ctgactgggc
     2581 agaccgacaa gcaacgtgat ataggtttct atctcattca ctttttgcac atcaaacact
     2641 gtttcgccat tgctgtattg atagttgtca agcacgcctg tattaggcga cgcaaagaaa
     2701 aaatagccgc caacagcgag caacacacct aaaaagaaca acaagacaaa tccaacccag
     2761 tcacgcgtca tagtaatcga gaatgagttt atcggttaac attaataaat ctttcccttg
     2821 aatcagcaag caattccctt tctgctggac aagagtttca tttgcttgtt gtaattggat
     2881 aacaccgaca gtaaaacttg catcctcaca ggttttcagc ggataattag cacaaagatc
     2941 gttatcctcg tagcaggcaa tgtctgtttg cgcaggaaga gagatatctc gttgaagatc
     3001 atagacagca ggctgaacat catcatacat gttcacgccc acataaactt tttgtagggt
     3061 actaaaacgt gaaaagtcta cagcaggcac aaaaacggat gcgaggtctt cggggtttgt
     3121 cgttagaaac agctgctgtc cactatcaag gtatgtctgc cagccaaagg acgtttgaac
     3181 aaacgtatga ccaccataag tcacctcttc ttctgcatct gtgttcagat taactgcgct
     3241 caggaccata atagaaataa gaaaaatccc cagggctatc gtcaggaact ttttctgctt
     3301 gtaccagact tccttttttt caatgtataa aggatctttc atgagaactg aaaatcagtg
     3361 agagaataaa aagattatgg tttcaaaaaa aaaaaaaaag gaaaaaattc ccttacactg
     3421 cagctgcaac gcttatgtca ctcaagctgg taccacttac taccatttcc gtaccgctca
     3481 attcgtaggt ctcccacgct gcaagagcct tcgctgccct tcttgtatct gttgccgttg
     3541 taccagcaac taagagagca actttgtctc cattgtcaac aagcttcaag actgcttcgc
     3601 cttcttggaa ggaccagccg tcacagctta catcgaagag ttctgctgca aggtcgtttg
     3661 cacatggacc accgacgaca atcaactggt agtcagaggc actgctaact tcggaagcca
     3721 acttcgtcac aggacttact tctgctggaa cgtagctgac accaccacta gaaactgtgg
     3781 tagatgttcc ttcgataaca acgtttgcct ttacttggtc tgatggaacg ctaagttcca
     3841 attggtcgct tgcaccgtta gattttgggt tcttgatgac gataccatag gcacttctat
     3901 gatcctcatc tttagtccca atgcttaatg gtaaggcagc attaccccaa agcaattcac
     3961 ttgcttcttc ggtagaccga gtatccccta aactgtcaaa ggacccgttt gctgctgcaa
     4021 gaccccaggc catttggata tcatccatct caccaggcca acctgagtca tcactagtta
     4081 tgtctaatgt gacgtttatc ctcactccgc cgtccgcgtt ttggttagct cctgacggac
     4141 cttgtgtata taggacgata ttggtgtctt tggtattccc gaagttcagt cgaagaattt
     4201 caacatcact agttcgagca tctacttcac caaataactt gaccttagag gcagaggtgt
     4261 ctttatagaa aactcctacc cattttgcca tgttagcaac cgatacatcc gccgcgttat
     4321 gtgtcccatt acttccgtta gcaaaccttt ccgcgccacc cggagtatag agccaaacat
     4381 cttttgcctt ttttgtagca gtttcgtttg cagaaacgtt attacttgca gtatacgccc
     4441 ttagctcaaa cccttcagtt gcactggtag ataagtgaag cccaggaaca ctagtgttcg
     4501 tcaagaacgt atcatcaaga ccaacagaag tgtcaaactc aaacgtatac gtcgcataat
     4561 catcttcgct aacagttaaa ctgttcaaac aaattttgac atagtcgttt ggcaaggcaa
     4621 tacattcccc aacaactttt gcaccactat ccatgtcatt gtagacaaag tcgttct
//
LOCUS       DATDZU010000098         3006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2357630, whole genome shotgun sequence.
ACCESSION   DATDZU010000098 DATDZU010000000
VERSION     DATDZU010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2357630"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VJJ79_03145"
     CDS             <1..361
                     /locus_tag="VJJ79_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22744.1"
                     /translation="IAAEYNGGKGIEDTVRFGAVFARSLWKGNFTLAKVYPTETTGEK
                     GAQFGLFISQDIAERVHASVLAEYNFKPNSLYGEAEVGVKLTERISAVGQVRAFLPLK
                     SPEDKEIAPIVGIRYSF"
     gene            741..1808
                     /locus_tag="VJJ79_03150"
     CDS             741..1808
                     /locus_tag="VJJ79_03150"
                     /inference="COORDINATES: protein motif:HMM:TIGR02928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLC22745.1"
                     /translation="MSNLFKDMLKEGESLFRDTIALDYDYLPKVLPYREKEQRQFAFA
                     IKPLLQERNGRNLFVYGAPGIGKTAACKHVLRELEDETDAVVPVYINCWKHNTAYKIL
                     LEMSERLGIRFTANLKTSELFARIKEVANKKSVVFVFDEIDKLEDFDVLYMLLEDVYR
                     KAVFLITNYKEKVSELDERIMSRLNPEMVEFKPYNKEETRGILEHRRKYAFVPGIWDE
                     EAFSMIVDKTAAHGDLRKGLFLMREAGNLAEENASRKIEREYVQKAIERQFVANEEKP
                     DDDAQRILGLVQQNPGEKMGPLFQKFLSQGSEMSYKSFQRKIEKLEKGKKVATEKVSG
                     GREGNTSVVYPYDQPKKLTEY"
     gene            1870..2349
                     /locus_tag="VJJ79_03155"
     CDS             1870..2349
                     /locus_tag="VJJ79_03155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22746.1"
                     /translation="MVRYSRLAVYTIGAVALFVLGRFAEGRYLEYRRERAVNQNVLAR
                     ALISKSVGFKDGDTEISAYANKFPPMVQISRIRRMGDKTECYTFVDDLFNNESDRSSF
                     DEGERTDDLARADYQGNWETLPVNVRNQVGAELEIKILNQIDPAAAQALLSREKKQK"
     gene            complement(2352..>3006)
                     /locus_tag="VJJ79_03160"
     CDS             complement(2352..>3006)
                     /locus_tag="VJJ79_03160"
                     /inference="COORDINATES: protein motif:HMM:NF014055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HLC22747.1"
                     /translation="KRMLEISMDVDDLPNAWYIEQAKNGLYMREAILIKLLSSGSQPV
                     PKSNGQKSLWNSIPITNGQKRGEHMVYRLDNGTLIDHINAGKGKDVLKVLALPEDTQL
                     IYAHNLRSSRYGKKDVLGFTNRELNEQELNKVGLVAPEATINVIKDQKVMKKGTVILP
                     TVIENLVVCPNPRCITSAQHNEHVHQKMIVESHDPLVLRCHYCELPIKREEIVLKEK"
BASE COUNT          905 a          526 c          716 g          859 t
ORIGIN      
        1 tattgcggct gaatacaatg gcggaaaggg tatagaagat acggtccggt ttggagcagt
       61 gtttgccagg tcactgtgga aggggaattt cactttagca aaagtttatc ccactgagac
      121 gaccggagaa aaaggtgccc agtttggatt atttatttcc caggacattg ccgaaagagt
      181 tcatgcgagt gtgttggcag agtacaactt taaaccaaat tcgctttatg gtgaagctga
      241 agtcggggta aaattaactg aaagaataag cgccgttgga caggtgcgtg cattcctccc
      301 attgaaatct cccgaggaca aagaaattgc tccaatcgtt gggataaggt acagtttcta
      361 agtgtaacaa aaagccttca tctccgcgct gaagcacgga gctttcggct tatttgaggt
      421 aaggaaacaa ttataaaccc ttaaaagata gtatttaaaa aagcacattt gaggtgaaac
      481 actatgatgt ctggatgtaa gaaatgtatg ggtgtctgtt gaggattgtt tgttctgttt
      541 ggcttgttat ttttgttgca agacttggat gtctggaatt tttggaatct tagctggtac
      601 acagtattat tcctgctgat gggcgttggt ggacttgcgc agagaacatg cccggattgt
      661 atggcaatga agaagggcaa gtaatttttt tcttattttt tgtcaaaact aataaatata
      721 agtcgtcttt ctaaagcatt atgagcaatt tgtttaaaga tatgctaaaa gaaggtgaat
      781 ctctgttcag agatactatt gctttggatt atgactatct tccgaaagta ttgccctatc
      841 gggaaaaaga acaacggcag ttcgcatttg ccataaagcc attattacaa gaacggaatg
      901 ggcggaacct ctttgtctat ggagcgcccg gcatcggcaa gaccgctgca tgcaaacacg
      961 tactacgaga attggaagac gaaacagatg cggttgttcc cgtgtatatc aattgctgga
     1021 aacacaacac agcgtataaa attcttcttg agatgtcgga gcgccttggc ataagattca
     1081 ccgcgaacct gaaaacatcc gagctttttg cgagaataaa agaagtcgca aataaaaaaa
     1141 gcgtcgtgtt tgtgttcgat gagatcgaca agcttgagga ttttgatgtc ttgtatatgc
     1201 tcttggagga tgtatatagg aaagcagtgt ttttgataac caattataaa gaaaaagtct
     1261 cagaactgga tgagcggatc atgtcacgct tgaatcccga aatggttgaa ttcaagccgt
     1321 acaataagga agagacgcgc ggcatattag aacaccgaag gaagtacgca tttgtacccg
     1381 gaatatggga cgaagaagca ttttcgatga ttgttgataa aactgctgca catggcgatc
     1441 tgcgaaaagg cttgttttta atgagagaag caggaaattt agcagaagaa aatgcatcaa
     1501 gaaagattga gcgtgagtat gtgcagaaag ccattgagag acagtttgtt gcgaatgaag
     1561 aaaagccgga tgatgatgca cagcgaatat taggattggt acagcagaat cccggtgaaa
     1621 agatggggcc tttgtttcag aaattcctgt cgcagggcag tgagatgtcg tacaaaagct
     1681 tccaacgaaa gatagagaag cttgagaaag ggaaaaaagt agcaactgaa aaggtttctg
     1741 gcggaagaga aggaaatacc agtgttgttt atccctatga ccagccgaag aaactgacgg
     1801 aatattagtt gttacttact aatggttaaa ataggaaggt ttaaatagag gttctgttct
     1861 aattcgatta tggttcgtta ttcaagatta gcagtatata caattggtgc tgttgccctt
     1921 tttgtattag gcagatttgc agagggtaga tacttagaat atagacggga gagggctgta
     1981 aaccaaaatg tgcttgcgcg cgccctgata agtaaaagcg tcggctttaa agatggggat
     2041 acagaaataa gtgcatacgc aaataaattt cctccaatgg tacaaatttc tcgaatccgt
     2101 cgcatgggcg ataaaacaga atgctatacg tttgtcgatg atttatttaa taatgaatca
     2161 gatcggtctt catttgatga aggcgagaga actgatgatc ttgcaagagc ggattaccaa
     2221 ggaaattggg aaactttgcc tgttaacgtc cgcaatcaag tgggtgcaga gttagaaata
     2281 aaaattctta atcaaataga tcctgccgct gcgcaagcat tgctttcacg agaaaaaaaa
     2341 cagaaataat tttatttctc tttcaataca atctcttctc tttttatcgg caattcacaa
     2401 taatggcaac gcaatactaa aggatcatga ctttcgacaa tcattttctg atggacatgc
     2461 tcgttgtgtt gggcagaagt gatgcagcgc ggattggggc acactacaag attttctatg
     2521 actgttggca gaataactgt cccttttttc attacttttt ggtctttaat aacattaatc
     2581 gtcgcttctg gcgcgacgag accaacttta ttcagttcct gttcgttcag ctccctgttg
     2641 gtgaagccga gaacatcttt ttttccgtaa cgcgaacttc ttaagttgtg tgcatagatg
     2701 agctgcgtgt cttccggtaa tgcaagcact ttgaggacgt cttttccttt gcctgcattg
     2761 atatggtcga taagtgtacc attgtccaga cggtacacca tatgctcgcc tcttttttgg
     2821 ccgttggtga tggggatgct attccacaag cttttttgac catttgactt tggaacgggt
     2881 tgcgaaccag aggaaagcag cttaatcaaa atcgcttcgc gcatataaag accgttttta
     2941 gcctgctcaa tataccatgc gtttggcaaa tcatcaacat ccatactgat ttcaagcatt
     3001 ctttta
//
LOCUS       DATDZU010000099         4552 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1394677, whole genome shotgun sequence.
ACCESSION   DATDZU010000099 DATDZU010000000
VERSION     DATDZU010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394677"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VJJ79_03165"
     CDS             complement(<1..485)
                     /locus_tag="VJJ79_03165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22748.1"
                     /translation="MKWFILIFLFLSLLSVSLVSAQEYERYSVEADVHKETVSFTLEA
                     IGDFSGETLFILPPGVKNLQTIMDSSSLLCFSEEIVGATQVSCFVPEGPHTLLFTFES
                     AYPLVSLDGRALFSQTIDVETDYFLFTVALPKGYVVEDPRFLTPEPDRIYSDGQRIIL
                     S"
     gene            577..682
                     /locus_tag="VJJ79_03170"
     tRNA            join(577..616,648..682)
                     /locus_tag="VJJ79_03170"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:613..615,aa:Glu,seq:ttc)
     gene            710..1015
                     /locus_tag="VJJ79_03175"
     CDS             710..1015
                     /locus_tag="VJJ79_03175"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HLC22749.1"
                     /translation="MGTYEILTIDGKEIHARVCTRWWEQALGYMCFSPLRKEAALLFV
                     LQEERKISLHTFFCRNKLNIFFLDKNKKVMEKHENISSWRMIKPKQPCFFVLETRCY"
     gene            complement(1009..1680)
                     /locus_tag="VJJ79_03180"
     CDS             complement(1009..1680)
                     /locus_tag="VJJ79_03180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22750.1"
                     /translation="MDLEDAVRCALRDETFYENMLKCLFFQTTVGSFSFVQEEERKVF
                     AGNVAQKLSIPGMLSPEELPRAASEDLGQYTSGYLLKHPIIGKTPGFVFLSKWLFFDE
                     GLQRSVFRAFLKGKVSDPLVALRTAGLQPSFEDYLQLNQIRDLYQNVALIRGYTTESH
                     MGEFPFVISQQLVPLAPDELRYVHGRTCPKLDGYYRTVVGKRFRDGSVHFASSSDKKE
                     ALTYQ"
     gene            1772..2701
                     /locus_tag="VJJ79_03185"
     CDS             1772..2701
                     /locus_tag="VJJ79_03185"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014065935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HLC22751.1"
                     /translation="MKVVEHILSSTEPRISFEITPPLRGGTIASLIDVVDRLAQYHPP
                     FIDVTSHAAERKNGRNGVTLRRKRPGTLGICAVIKHAYKIDAVPHVLCKGFTREESED
                     FLIDMHYLSIENVLAIQGDDHGYQKPVLEGRSINTYAKDLVQQITAMNKGKYLEDVCA
                     DQTNFCIGVAGYPEKHVIALDKETDIRYLKEKVEAGAQYIVTQMFFDNQNYFNFVGRC
                     RAAGITVPIIPGLKIITKQNQLVNIPNFFHVEIPSELAEEVRAAKPEHVPYVGVEWAA
                     RQVKKLLNANIPLIHFYVVQNADPIEKLIEQLK"
     gene            2822..>4552
                     /locus_tag="VJJ79_03190"
     CDS             2822..>4552
                     /locus_tag="VJJ79_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22752.1"
                     /translation="MVRKVIQDEEILALLHEKTMLTRRDFEKAFPGKDRATLLRRIES
                     LRKKEAVVSFDDERKENEKKESDKRITTYYVPTSLIQKDPEEAVKILPLKRVYDIAQY
                     LFLDRDLDRIGAITHVSKPFVQAIHAFLQKKGLVDKSSFVEAFPLPETDEQIYTYLKD
                     HKHAARSVIQKDLNIKKMELEESLERLGYFTDIFFVYNHDERTRHYFSPDYFTNITDI
                     NEFKTRIGKRNALRLNEILDTRAMGWRSLTEAMGFDTDSSITREYNNLSPLYNFIHRK
                     IEAGGEDEEKEEMVLVPNKSTQLPTEGLFVKNLAERLSGQYYLPKDLLKEANKLKKEM
                     GLKNKLDLEEIVTHLESQGYALEKRGGLYTTPRPAKKKQPRAKVYMLSEVGWDTAYFN
                     PEAYDTLIQFMSKDETISGIIIDGALTRLDRPEFLNEDLTYWTRSEEECRKATEEIPN
                     KEQYKTMLGIQFRILEARLAELRKRVPNAKEVVLYMESDDLQYTASAILNESLIRKKG
                     SLDETIKGLKTEKKRINKEFKAKQEEYKKSPDAPTTSARELEDYQRRVEGLEETLEDA
                     QQEKLLYREKK"
BASE COUNT         1611 a          920 c          926 g         1095 t
ORIGIN      
        1 catgaaagaa tgatccgttg tccatcagaa tatatcctgt ctggctctgg cgtaagaaat
       61 ctggggtcct caacaacata tcccttaggc aacgcaactg taaaaagaaa ataatccgtc
      121 tcaacatcaa ttgtctggga aaataatgcc cttccatcaa gggaaactaa cggatatgcg
      181 ctctcaaacg taaaaagcaa ggtatgcgga ccttctggaa caaaacaaga aacctgcgtt
      241 gcaccaacaa tttcttcgga aaagcacaag agagaactgc tgtccattat cgtctgcagg
      301 ttcttcacac ctggcggaag gataaaaagc gtttctccgg aaaagtctcc gattgcttca
      361 agtgtaaagg agacggtttc tttgtgcaca tctgcttcaa cagaatagcg ctcatactcc
      421 tgtgcagaaa caagacttac gctcagcaat gaaaggaaaa gaaagataag aataaaccat
      481 ttcataagag aaagagacac agtgagagta tatataatct ttcccctctc gagagaaagt
      541 tatataaagc tgagaaaatc cttcctgaga attcatgtcc ctgtagtgta gttcggccaa
      601 tcattcgtcc ctttcgagga aacttgaaga aaagtttcgg caaggaaagg acgagacccg
      661 ggttcaaatc ccggcgggga cactttttta ctaactcatt ctttgaacaa tgggaaccta
      721 cgaaattctc acgattgacg gaaaagagat ccatgcacgt gtgtgtacac gatggtggga
      781 gcaggcactc ggctatatgt gtttctcacc gttacgaaaa gaagctgcgc tgttgtttgt
      841 attgcaggaa gaaagaaaaa tatcgctaca tacgtttttc tgcagaaaca agttaaacat
      901 ctttttttta gacaagaaca aaaaagttat ggaaaagcat gaaaatattt catcgtggcg
      961 tatgatcaaa ccaaagcaac catgtttttt tgttttggaa acacgatgtt attgatatgt
     1021 taacgcttct tttttatccg aagaagaggc aaaatgcact gagccatccc tgaatcgttt
     1081 tccgacaacc gtacgatagt atccatctaa ttttggacaa gtccgcccat ggacataccg
     1141 aagctcatca ggcgcaagtg gcacaagttg ctgagagatg acaaaaggaa attctcccat
     1201 atgcgattca gttgtatagc cacgaataag cgcaacattt tggtaaaggt ctcgaatttg
     1261 gttcagctgc agataatctt caaaactggg ctgcaaaccg gcagtacgta acgctactaa
     1321 gggatccgat acttttcctt tcaaaaacgc gcgaaacacg ctgcgctgaa gtccttcatc
     1381 aaaaaataac catttgctaa ggaatacaaa cccgggcgtc ttcccgatga ttggatgttt
     1441 gagtaaatat cctgacgtat attgtccgag gtcttcactt gcagcccgag gcaattcttc
     1501 aggagaaagc attcccggaa tagacaattt ttgtgcaacg tttccagcaa acacttttct
     1561 ttcctcttct tgaacaaagc taaaggaacc aacggtcgtc tgaaagaaca ggcacttcag
     1621 catattctcg taaaaagttt catcacgcaa cgcgcaacgt actgcatctt caaggtccat
     1681 acaaacaaaa ataaaaaaac cttttttata aaccttccgt ggatggaaac cacataacgc
     1741 ttaaataaac agatggttat tttctatttt tatgaaagtc gtggaacata ttctgagctc
     1801 aactgaacca cgtatcagtt tcgagatcac tcctccgctc cgtggcggaa ctattgcttc
     1861 tttgattgac gtcgtcgacc gccttgcaca gtaccacccg ccgttcatcg acgtcacaag
     1921 ccacgcagca gagcgaaaga atggaagaaa cggtgttaca ctacggagaa aaagacctgg
     1981 aacgttaggc atctgcgcgg tgattaagca tgcatataag attgacgcag ttccgcatgt
     2041 cctatgcaaa ggatttaccc gagaggaaag tgaagatttt ctcatcgata tgcattatct
     2101 cagcatagaa aatgtattgg caatccaagg agacgatcat ggatatcaaa aaccagtact
     2161 cgaaggaagg agcataaata cctatgcaaa agatctcgtg caacaaatta ctgcaatgaa
     2221 taaaggaaaa taccttgaag acgtctgtgc agaccagact aacttttgca ttggcgttgc
     2281 aggctatcca gaaaaacatg ttattgctct cgataaggaa actgacatca gatatttgaa
     2341 agaaaaagta gaggccggcg cacagtacat tgtgacacag atgtttttcg ataatcagaa
     2401 ctatttcaat tttgttgggc gctgtcgtgc agcaggtatc actgttccaa ttattcctgg
     2461 attaaagatt ataacaaaac aaaatcagct agtgaacatc cctaatttct ttcacgttga
     2521 aataccatca gaattagcag aagaagtacg cgctgcaaaa cctgagcacg ttccatatgt
     2581 cggcgttgaa tgggcagcaa ggcaagtcaa aaaattacta aacgcgaaca ttcctctcat
     2641 ccatttttat gtggtacaaa acgcagatcc gatagaaaaa cttatagaac aattaaaata
     2701 ggtgaaaaga gtataataat aaaagacact aaattatata agtctttcga agaactcttc
     2761 attggttttc caacataaat atttataagg tattatcgga tagtttgtag taaagaaaaa
     2821 aatggtgcgg aaagtaattc aggacgaaga aattcttgca cttcttcatg aaaagacgat
     2881 gctcactagg cgggattttg aaaaagcatt tcctggcaaa gatagagcaa cacttctcag
     2941 gcgcatagaa tctttacgaa aaaaagaagc ggttgtctct tttgatgacg agagaaaaga
     3001 aaacgagaaa aaagagagtg ataaaagaat aacgacatac tacgtcccaa caagtctaat
     3061 acagaaagat ccagaagaag cagtcaaaat tcttccacta aaaagagtat acgatatcgc
     3121 acagtatctt ttcctcgata gagaccttga tcgaatcggt gcgattactc atgttagtaa
     3181 accttttgtt caggcgatac acgcatttct ccaaaaaaaa ggacttgtgg ataaatcatc
     3241 atttgtcgaa gcattccctc ttccagaaac agacgaacaa atatacacgt atctgaagga
     3301 ccacaaacat gcagcacgtt ctgttatcca aaaggattta aatataaaaa aaatggaact
     3361 cgaagaaagc cttgaacgtc tcggctattt tacggatatc ttctttgtgt ataaccatga
     3421 tgaaagaaca agacattact tttcaccaga ctactttaca aacataacag acatcaacga
     3481 atttaaaacg cgcattggaa aaaggaatgc attacggttg aatgaaattc tcgacacgag
     3541 agcaatgggc tggcgttcgc taacggaagc aatgggattt gatacagaca gctctatcac
     3601 acgagaatat aacaacttaa gcccactcta caactttatc cacagaaaaa tagaggcagg
     3661 aggagaagac gaagagaaag aagagatggt gcttgtccca aataagagca cacagttacc
     3721 aacagaagga ttatttgtaa aaaacttggc agagcggtta agtggacaat actacttacc
     3781 aaaagacctt ttgaaagaag caaataaact taaaaaagaa atgggtctta aaaacaaact
     3841 agacctagaa gagatagtta cccacttaga gtcccaagga tacgcactag aaaaaagagg
     3901 tggcctgtat acgacaccaa gacctgcaaa gaaaaaacag ccaagagcaa aagtctacat
     3961 gttgagtgaa gttggctggg acacggcata ttttaaccca gaggcctacg acacacttat
     4021 tcaattcatg tccaaagatg aaaccatttc tgggattatc attgacggtg cgctcacacg
     4081 acttgacaga ccagagtttc tcaatgagga tctaacctat tggacacgct cagaagaaga
     4141 atgccgaaaa gcaactgaag agatcccaaa caaagagcag tacaaaacaa tgttaggcat
     4201 acagttcaga attcttgaag cacggctagc agagcttaga aaacgagtgc cgaatgcaaa
     4261 agaagtcgtc ctgtacatgg aatctgatga tcttcaatac actgcctctg caattctcaa
     4321 cgaatcctta atcagaaaaa agggatcact cgatgagact attaaaggac taaagaccga
     4381 gaagaaaaga attaataaag aatttaaagc taagcaggaa gaatacaaga agagtccgga
     4441 cgcaccgaca acatctgcac gagaacttga agattatcaa cgacgcgtcg agggtttaga
     4501 agaaacgctt gaggacgcgc agcaagaaaa attattatac agagaaaaga aa
//
LOCUS       DATDZU010000100         4358 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_135293, whole genome shotgun sequence.
ACCESSION   DATDZU010000100 DATDZU010000000
VERSION     DATDZU010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 4358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4358
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135293"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1984
                     /locus_tag="VJJ79_03195"
     CDS             <1..1984
                     /locus_tag="VJJ79_03195"
                     /inference="COORDINATES: protein motif:HMM:NF024777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /protein_id="HLC22753.1"
                     /translation="ATGEQIFDTNGSTPNRENIQLVEGGNARLTLRLSNGTANTLYGA
                     NATTVIPGRTWTHVTATYKNGSHVRLYINGTKRTDQAPVTQLIAMDQPTFIGGKGPSG
                     QARSFNGSIDEFIIINKSLTDNQILLYYRNQSNVIHSTTTVKENWTGQVYPTDNASTG
                     TALNASLQIVNSVANITNFFINTTDPQNRSNGTINVSFDLEDVDNDSVRYQVDWDLNT
                     VLNKTFANQTNISPGNTSRGNNFSAVVAAFDETSWSTNQTGSVVITNTAPTPADITNP
                     NATDIWNGTKLINWTASTDIDELDTWYYNLTLINSDNTANATIATLLSQSATNYSWNA
                     SSVKDGQFRINITTTENNTDEKFTVTNVSNLFNISTTETISAVEAAPSVSAGSSGDSG
                     SSGGGGGEKKEKVVLGFEIDTKELQFELARGEAEEKIFTIKNTGTAPQTFALSVEGVD
                     AMLTVVPERFVLGPGEEKVVIAYVISSDETGIFTGNVRVETDGGSKELPVVIEVESKT
                     VLFDARLSLDPVFVALTPGDNLPVEVTLFSIGAPRNVDVELRYSLRDIYGNLLWTSSE
                     TMAVENQKTFSKDFALPGDLSDGMYVLGLEVLYLNSVATSTVTFDVLKSLDTIYGVAF
                     FKQNFVLFLTFVVVVFVTLAGAYILYQTRNGGKRRG"
     gene            2031..>4358
                     /locus_tag="VJJ79_03200"
     CDS             2031..>4358
                     /locus_tag="VJJ79_03200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22754.1"
                     /translation="MKPEQKKVFQLFSLVLVLVVLLFFLFAFVNSGSLADEELLELDH
                     VVLKVLLHPNEVFGDSLSVKNLVARPISADVSLERLEELVTVTPPALSFYPQETKTLA
                     LDFLAEEEGVYAGNLLFRSDGYEKRLPVVVEVESSNIAFDIQVTLSAYNTELQPGEDA
                     LFSITIYDLNGGDQSQSVDISYMLTDFSGKVLYSEMENYAFTGQTSLVKVIALPEDLE
                     KGSYLLAVEGKMEGNVATSSYLLKVSKHGVLGSVSKVCSVSSYFCALSMLIVFLLVFF
                     VGATLYLTFGAQIRQAKHRVTSDTTFALLILFIFLFFIVLLFFLVFNLSVIDVISSFA
                     LVPVFVYWLLLGLAVLCGLVYFFLKHPPHISLKKKKPLLAVEEFDFNVLKHLWVRRQN
                     EKEHVKKELDRLLQQVETGEKRSLPFSGFFSRLKDLFSRRKEEALPLVKEKEVPEPLP
                     SAPQLKKLPAVKNKPFFAPLLAWNKNLWKKSVEKEAALVKDKQALQKTAIATMSQAWK
                     KNRVRLSHAWRTVARVPQTIGTDISRRAIASKTSLTHFLHALKPKPLPIKKIFVAPKH
                     KKKIVWKKIFANLLPKWKKPSVKEIPRFTQLPSVPQHPVKKKLKSFHQLFAKLTLPKI
                     KVPHFKIKEKFVSLKAKIVHLLPKKKIIRKTAIPIFKPAPLAPQAPSVKKKSFALRHL
                     FAKIKIPKIKIPRLKLTVPHFEIKEKLISLKAKIVHLLPKKKIVRKKAIPIFKPLPLA
                     PQAPSVKKKSFALRHLFAKIKIPKIKIPRLKLTVPH"
BASE COUNT         1303 a          895 c          914 g         1246 t
ORIGIN      
        1 ggctactgga gaacaaatat ttgatacgaa cggaagcact ccaaacaggg aaaatattca
       61 actcgttgaa ggtggcaatg ctcgacttac tcttcggtta agtaatggga cagcaaatac
      121 tctatatgga gctaatgcaa ctacagttat ccccggaaga acatggacgc acgttacggc
      181 aacatacaaa aatggaagcc atgtacgatt atacattaat ggaactaaaa gaacagacca
      241 ggcaccagta actcaattga ttgccatgga tcagccaaca tttattggag gcaaggggcc
      301 atcaggtcaa gcaagaagct ttaatggcag cattgacgaa tttatcatta tcaacaagtc
      361 tcttaccgat aaccaaattc tactttacta tagaaaccaa agtaatgtga tccacagcac
      421 tacgacagtg aaagaaaact ggactgggca agtgtatccc acggataatg cttcgacggg
      481 aacagcattg aacgcgtcgt tgcaaatagt gaactctgtt gccaatatta ctaatttctt
      541 tatcaatacg actgatccgc aaaatagaag caatgggacg attaacgtaa gcttcgacct
      601 cgaagatgtt gataacgact cggtgaggta tcaggttgac tgggatttga acacagtgtt
      661 gaataaaacc tttgcgaacc aaacaaatat ttctccaggg aatacatcta ggggaaataa
      721 tttcagtgca gttgttgccg cgtttgatga gaccagctgg agcacgaacc agacaggaag
      781 cgttgtcatt actaatactg caccgacacc tgccgatatt acaaacccga atgcaacaga
      841 catatggaat gggacgaagc tgattaactg gacggcatca acggacatag acgagcttga
      901 tacgtggtac tacaatctca ctttgattaa cagcgacaat acggctaatg caaccatagc
      961 aacgctcctt tcccaatcgg caactaatta cagctggaac gcaagcagtg taaaagatgg
     1021 gcaatttagg attaatatta cgactaccga aaataatacg gatgaaaagt ttactgttac
     1081 caacgtatcc aatcttttca atatctcaac cacggaaaca atatctgcag ttgaagcagc
     1141 accatctgtc agcgcaggta gtagcggtga tagtggaagc agcggcggtg gaggcgggga
     1201 gaagaaagaa aaagtggttt taggattcga gattgatacc aaagagttac aatttgaact
     1261 cgcccgcggt gaagcagaag aaaagatatt tactataaag aatacaggaa cggctccgca
     1321 aaccttcgct ctctctgtcg agggtgttga tgcgatgctc actgttgtgc ctgaacgatt
     1381 tgttcttggc cccggagaag aaaaagtggt tattgcgtat gtgatatctt ctgatgagac
     1441 aggaatcttt actggaaatg ttcgtgttga aacggacggc ggatcaaagg aacttcccgt
     1501 tgtcattgaa gtagaatcaa agacagttct cttcgatgca cgtctaagtc ttgaccccgt
     1561 gtttgttgca ttgacgccag gggataatct tcctgttgag gttactctct ttagcattgg
     1621 cgcgccgaga aacgttgatg tcgaacttcg ctattcgctt cgtgatatct acggaaattt
     1681 gttgtggacc agcagcgaaa caatggctgt agaaaatcaa aagacattta gcaaggactt
     1741 tgcactccca ggagacttat ctgatggcat gtatgtcctt ggcttggagg tcttatactt
     1801 gaactctgtt gcaacgtcta ctgtgacctt tgatgtcctc aaaagtttag atacgattta
     1861 tggtgtcgcg ttttttaaac aaaactttgt gctattcctt acctttgttg ttgttgtctt
     1921 tgtcacgctt gctggcgcct atattctcta tcaaacaaga aatggaggaa aacgtcgtgg
     1981 ataaagtaac atatataaat gttgctccat acgttagtat ataaaagagg atgaagccgg
     2041 aacaaaaaaa ggtctttcag ttatttagtt tagtcctcgt tttggtagtt ctgctgtttt
     2101 ttctttttgc ttttgtcaat tccggatcat tagcagatga agaactgctt gaactggatc
     2161 atgttgtttt gaaagtgttg ctccatccta acgaagtatt tggagattcc ctttctgtga
     2221 aaaatcttgt tgcccggccg atttctgctg atgtttcatt ggaacgtctt gaggagcttg
     2281 ttactgtaac cccgccagca ctttcttttt atcctcaaga aacaaaaacc cttgcattag
     2341 actttcttgc cgaagaggaa ggggtctatg cgggaaatct tctctttcgt tcagatggat
     2401 acgaaaaacg gttgcctgtt gttgtagaag ttgaatcttc caatattgcc tttgatatac
     2461 aagtgacact cagcgcgtat aatacagaac ttcagccagg agaagatgcg cttttcagta
     2521 ttaccattta cgatcttaat ggcggggacc agagccaaag cgtcgatatt tcctacatgt
     2581 taacagattt ctcaggaaag gtactctatt cagagatgga aaattatgct tttaccgggc
     2641 agacgtctct tgtcaaagtt attgcattgc cagaagacct tgagaaagga agttatcttc
     2701 ttgcagttga aggaaagatg gaaggaaacg ttgccacgtc ctcgtatctt ttgaaagtga
     2761 gcaagcacgg tgtcctcggt tccgtttcta aagtgtgtag cgtgagcagt tacttctgtg
     2821 cgctttccat gctgattgtt ttccttcttg tcttttttgt tggcgcaacg ctatacctta
     2881 ctttcggtgc acagattcgg caagccaagc accgtgttac aagtgatacg acttttgctc
     2941 ttcttatcct gtttatcttt ttatttttca tcgtcttgct ttttttcctc gtctttaacc
     3001 tcagcgttat cgatgttatt tcctcttttg ctttagttcc tgtctttgtt tactggcttt
     3061 tactgggtct tgcagttctc tgtggcctcg tgtacttttt cttgaaacat ccccctcata
     3121 tctcattgaa gaaaaagaaa ccgttgctcg ctgttgagga atttgacttt aacgtgttaa
     3181 agcacttatg ggtgcgacgg cagaacgaaa aagagcacgt gaagaaagag ttggaccgtt
     3241 tattgcagca agtggagacg ggagaaaaga gatcgttacc attctcagga tttttttcac
     3301 ggctgaaaga tttattttct agaagaaaag aggaagcatt gccgcttgtt aaagaaaaag
     3361 aagtcccaga acctcttccg tctgctcctc agctaaagaa attgcctgct gtaaaaaata
     3421 aaccgttctt tgcaccattg cttgcatgga ataaaaattt gtggaaaaag tctgtagaaa
     3481 aagaggcagc tcttgtcaaa gataagcaag cgcttcaaaa gacggccatt gctacgatgt
     3541 cccaggcttg gaaaaaaaat agggtgcgtt tatctcatgc gtggagaaca gttgcacgag
     3601 tcccgcaaac aattggtact gacatttctc gacgtgcaat tgcatctaaa acctcgctta
     3661 cccatttctt gcacgcactg aaacccaagc cgttacctat caagaaaatt tttgttgccc
     3721 caaaacataa gaaaaaaatt gtatggaaaa agatatttgc caatttattg ccaaaatgga
     3781 agaagccatc tgttaaagaa attccacgtt ttacgcagtt accttccgtg ccgcagcatc
     3841 ccgtgaaaaa gaaacttaag tcattccatc agctgtttgc aaaattaact ttgccaaaaa
     3901 taaaagttcc tcacttcaag attaaggaaa aatttgtttc tcttaaagca aagatagtgc
     3961 atctccttcc taagaagaaa ataattagaa aaactgcgat tcctattttc aaacctgcgc
     4021 ctcttgcgcc acaagctcct tctgttaaaa agaaaagctt tgcattgcgt catctttttg
     4081 caaagataaa aatccctaaa atcaaaattc ctcgactgaa acttacagtc ccgcactttg
     4141 agattaaaga aaagctcatc tctcttaaag caaagatagt gcatcttctt cctaagaaga
     4201 aaatagttag gaaaaaagcg atccctattt tcaaacccct gccccttgct ccacaagctc
     4261 cttctgttaa aaagaaaagc tttgcattgc gtcatctttt tgcaaagata aaaatcccta
     4321 aaatcaaaat tcctcgactg aaacttacag tcccgcac
//
LOCUS       DATDZU010000101         3611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1129351, whole genome shotgun sequence.
ACCESSION   DATDZU010000101 DATDZU010000000
VERSION     DATDZU010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1129351"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VJJ79_03205"
     CDS             complement(<1..795)
                     /locus_tag="VJJ79_03205"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HLC22755.1"
                     /translation="MKSKIRIVLEFLVAFAIILFLLSKINVEDVAALLKVIDYRWIML
                     GIVVYIVSLLLTAYSLKALFNSVRIISFKEWLRYYLIGLSTGLVLPGRAGDLSVIYFL
                     KDKGFDIGESTALTLVDKAITLAIFSMIAFLGLFTILSSKELIYGIIAAFVLLIGCLF
                     LFTERGKNIVKKIIGRYAENFKGFSRTLKNLLKNHKEKIAINIIVTILRPIGNGLLIV
                     FILKAMHYDVSLLYASLISSITLIASLTPLTPNGLGIREGVGTFLFS"
     gene            complement(828..1715)
                     /locus_tag="VJJ79_03210"
     CDS             complement(828..1715)
                     /locus_tag="VJJ79_03210"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLC22756.1"
                     /translation="MESLEVAVEIMSNKKILITGGTGFIGASIATELQKRGYNISLIA
                     RTEKNVPKNILFYKADVIKENEVKEAIRLSQPDIIIHTAGRMNGSWDELYETNVIGTE
                     NILNNFSGRIIFLSSSSVYENNPVPFHEEMVVLPGSAYGKTKRMAEELCLERKQAVAV
                     RASVIYGPGQEGTMFISRLCQYVQQKQGAFPMTPGDQTRDFVYISDVVNAMVKILETE
                     YDGILNIGAGKSYMLNEVLTLAQEIIGEFPIERTLPYRENEVMVHAMDISKARSILEW
                     EPEVELRAGLKRVLNHSAT"
     gene            complement(1697..2485)
                     /gene="rfbF"
                     /locus_tag="VJJ79_03215"
     CDS             complement(1697..2485)
                     /gene="rfbF"
                     /locus_tag="VJJ79_03215"
                     /EC_number="2.7.7.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006524589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047343 - glucose-1-phosphate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="HLC22757.1"
                     /translation="MEKPKVVILCGGMGTRLREETEFKPKPLVRVGEYPILWHIMKTY
                     SHYGFNDFVLCLGYKGEEIVRYFTNYRDTNDMTLNPRTRTRTLHGSRDYTPNWNITFA
                     HTGLKSNTGSRIKQIEKYIPSDNFMVTYGDGVADVNIEQLSRFHHVHGKIATVTAVHP
                     PPRFGTLKIDEEMLVQAFEKDKRSEDSWIDGGFFIFNRRIFDYLTTDIGCMLEGDTLP
                     QLVKENNLKAYKHTGYWQCMDNVRDVETLNQIWDDGKAPWKVWK"
     gene            complement(2467..3168)
                     /locus_tag="VJJ79_03220"
     CDS             complement(2467..3168)
                     /locus_tag="VJJ79_03220"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLC22758.1"
                     /translation="MPEFSLVLPMYNEEQIATRVLAELQSVLDKEGIEYELVVVDNGS
                     NDKTGEILEALHKIDTRIRPVHVKVNEGYTWGIACGLKEARGKILGFSDGDGQIDPQD
                     ILRVYKRLNETDAVFCKGTRCRRKDGWKRIVASSAYNLIFQVLFFIRIRDINGKPKIF
                     KREFYDQITLESKDWFIDPELIIKLVHKGYKVEDVKIWFSERTKGKSNISYGTVHEFL
                     RNMIRWRIALWKNRK"
     gene            complement(3212..>3611)
                     /locus_tag="VJJ79_03225"
     CDS             complement(3212..>3611)
                     /locus_tag="VJJ79_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22759.1"
                     /translation="VLTATKKLDFVTNVGFILGLPGDTKESIQRTMDYMLSCDATLVN
                     VYGLAILKGSDLEKQYASVEEACTIPQEEVLQMTQEVSKKFYSRPKTLARIAYLIMRN
                     NPTWPLRVGVTCLPSILARIGFVRNKKAEN"
BASE COUNT          932 a          800 c          698 g         1181 t
ORIGIN      
        1 tgaaaagaga aacgtgccga cgccttcccg tatgcctagg ccgtttgggg ttaatggcgt
       61 gaggctagcg atcagggtaa tggagctgat taagcttgcg tacaataacg aaacatcgta
      121 atgcattgcc tttaaaatga acacaatcag aaggccgttt cctattgggc gaagtatcgt
      181 gactattata ttgattgcaa ttttttcttt atggttctta agtaaatttt ttaacgtgcg
      241 actaaatccc ttgaaatttt cggcatacct gccaataatt tttttgacaa tgttttttcc
      301 tctttctgtg aatagaaaca agcagccgat aaggagaaca aatgcagcga taatcccgta
      361 gataagttct ttcgagctca gaatcgtgaa gagaccaagg aatgcaatca tgctaaagat
      421 ggcaagcgta attgctttgt cgaccaacgt taacgcagtg ctctcgccaa tgtcaaatcc
      481 cttgtctttt aaaaaataaa tgacggaaag gtcgcctgcg cggccaggga gcacaaggcc
      541 cgtcgataat ccaatgaggt agtatcgcag ccattctttg aatgaaatga tcctgacaga
      601 attgaataat gcttttaggc tgtatgcggt tagcagcagc gagacaatgt acacgacaat
      661 gccgagcatg atccagcggt agtcaattac tttgagcagc gctgctacat cttccacgtt
      721 tatttttgat aggagaaata gaataattgc gaatgcaaca agaaactcaa gaacaatacg
      781 aattttggat ttcattcaca caaataagga acaaggcttt taaaagttta tgtcgcagaa
      841 tggttgagta ctctctttaa tcctgcccgt aactctacct ccggttccca ttcgagaatg
      901 cttcgtgcct tggaaatgtc cattgcgtgc accatgactt cattttctct gtacggcaag
      961 gttctttcaa tgggaaactc tccgatgatt tcttgtgcaa gagtaaggac ttcgttgagc
     1021 atgtaacttt ttccagcgcc aatgttcaaa ataccgtcat actccgtttc gagaatcttt
     1081 accattgcat tgaccacgtc gctgatgtag acaaagtccc gtgtctggtc cccgggcgtc
     1141 attgggaatg ctccttgttt ttgttgaaca tattgacata gtcttgagat gaacatggtt
     1201 ccttcttggc ctggtccgta aatgacgctt gcacgcacag ctactgcctg ctttctttcc
     1261 agacatagct cttctgccat gcgctttgtt tttccatatg cactcccggg taagacaacc
     1321 atttcttcat gaaacggaac agggttgttt tcgtagacgc tggacgagct cagaaaaatt
     1381 attctcccag agaagttatt taggatattt tctgttccga tgacatttgt ttcgtagagt
     1441 tcgtcccaac ttccattcat ccttcctgca gtgtgaatga tgatgtctgg ttgtgagaga
     1501 cgaattgctt cttttacttc gttttctttt attacgtctg ctttatagaa gaggatattt
     1561 tttggtacgt ttttttccgt gcgtgcgatg agagaaatat tgtatcctct tttttggagt
     1621 tctgttgcaa tagaagcgcc aatgaatcca gtcccacccg taatcagaat tttcttgtta
     1681 gacataatct caacggctac ttccagactt tccatggtgc cttgccgtcg tcccagattt
     1741 ggtttaatgt ttctacgtct cttacattgt ccatgcattg ccagtagcct gtgtgcttgt
     1801 atgccttgag attgttttct tttacaagtt gcggaagcgt atcgccctca agcatacaac
     1861 caatatctgt tgtgagatag tcaaatattc ttctgttaaa aataaagaac cctccgtcaa
     1921 tccaggaatc ttcagaccgc ttgtcttttt caaatgcttg aactagcatt tcctcatcga
     1981 ttttaagtgt tccaaatcgc ggagggggat gtactgctgt taccgtcgca atctttccat
     2041 gcacatgatg aaatctagaa agctgctcaa tatttacatc tgcaaccccg tcgccatagg
     2101 ttaccataaa attatctgac gggatatatt tttcaatttg tttaatcctt gatcccgtgt
     2161 tgcttttcag gcctgtgtgc gcaaaggtaa tgttccaatt aggagtataa tctctgcttc
     2221 catgcaacgt cctcgtcctt gttcttggat ttagagtcat atcattagta tcacgataat
     2281 ttgtaaagta cctcacaatc tcttccccct tgtatccaag gcagagaaca aagtcattga
     2341 agccgtaatg gctatacgtt ttcataatat gccaaagaat tggatactcc ccaactcgga
     2401 cgaggggttt tggtttaaac tccgtttctt ctcgtaatcg tgttcccatt cctccacata
     2461 gaattactac tttcggtttt tccataaagc aattctccat cggatcatat ttcgtaaaaa
     2521 ttcatgaact gttccgtagg aaatatttga ttttccttta gttcgttcac taaaccagat
     2581 tttcacgtcc tccactttat aacctttatg aaccaatttt atgatcagct cagggtcgat
     2641 aaaccagtcc tttgattcta gcgtaatctg gtcatagaac tcccgcttga agatttttgg
     2701 tttgccatta atatctctta ttcttataaa aaagagaact tggaaaatga gattatatgc
     2761 tgatgatgca acgatacgtt tccatccgtc ttttctcctg cagcgtgttc ctttgcaaaa
     2821 aaccgcatca gtttcattta accgtttgta gaccctgaga atatcttgcg ggtcgatctg
     2881 tccgtcaccg tcagaaaatc ccaagatttt tccccgtgct tcttttaatc cgcaggcaat
     2941 gccccacgtg tatccttcat tcacttttac atgtacgggc cggattctcg tatcaatttt
     3001 atgtaatgct tcaagaattt cacccgtttt gtcattggaa ccattatcaa cgacaacaag
     3061 ctcatattct attccttcct tgtctaacac cgattgaagc tccgcaagca cacgcgtggc
     3121 aatttgctct tcattataca taggtaatac tagtgaaaat tcaggcattt tcattcggga
     3181 agaacatctt acttttaaat ttttctaact cttaattctc tgctttctta ttccggacaa
     3241 atccgatgcg tgcaagaatt gatgggaggc acgtgacacc cacgcgcaat ggccatgtcg
     3301 gattgtttcg cataatcaag tatgcaattc gtgctaatgt ttttggccgg ctatagaatt
     3361 tttttgatac ttcctgcgtc atttgaagaa cttcttcctg gggaatagtg catgcttcct
     3421 ctacgcttgc gtactgcttt tctaaatcag atcctttcaa gattgcgagc ccgtacacat
     3481 ttaccaatgt cgcgtcgcag ctgagcatat aatccatagt tctctggata ctttcctttg
     3541 tgtctccagg caatcctaag atgaatccta cgtttgttac gaagtctaat ttctttgttg
     3601 ccgtcaaaac t
//
LOCUS       DATDZU010000102         7945 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_2198833, whole genome shotgun sequence.
ACCESSION   DATDZU010000102 DATDZU010000000
VERSION     DATDZU010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 7945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7945
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2198833"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1647)
                     /locus_tag="VJJ79_03230"
     CDS             complement(<1..1647)
                     /locus_tag="VJJ79_03230"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing)"
                     /protein_id="HLC22760.1"
                     /translation="MEETTRIKKQPIEQEMKSSYLDYSMSVIVGRALPDVRDGLKPVH
                     RRILYAMQQIGLTHGAKFKKSAAVVGDVIAKYHPHGDAAVYDAMVRMAQEWSLRYPLV
                     KGQGNFGSIDGDSPAAYRYTEAKLAKIADEMLGDINKETVDFQDNFDGSYKEPIVLPA
                     NIPNLLVNGSTGIAVGMATNIPPHNLKEIANAIIHLIKNPNAENDVLFQFVQGPDFPT
                     GGIICGRSGIWNAYKTGKGRLVVRARTQIEEKNDRQRIIITEIPYMVNKSMLLESIAD
                     LVNEKVVEGISDIRDESDRKGMSIVIELKRGEDPNVVLNQLYKHSQLQETFGVIMLAL
                     DGKQPKVMILKEILAHYIAHRKIVVVRRTRFDLQRAEERAHIVEGLRVALMNVDQIVK
                     GIKASNTVEAAREFLMKNYKLSEIQAQAILDMKLQKLTSLETEKIQEEYKELLKTIDN
                     LHSILASDEKVLNIIQKEVEELRDNYLDERRTTISDEEEDVDIEDLIPEEDVVVTMTN
                     SGYVKRLPIEEYRTQHRGGVGVKGAEKKEEDIVESLFITST"
     gene            complement(1649..3535)
                     /gene="gyrB"
                     /locus_tag="VJJ79_03235"
     CDS             complement(1649..3535)
                     /gene="gyrB"
                     /locus_tag="VJJ79_03235"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013840095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HLC22761.1"
                     /translation="MGDYKAVNIQVLKGLEAVRTRPAMYIGDTNVRGLHHLVYEVVDN
                     SIDEALAGFCTKVDVIINKNGSVTVRDNGRGIPVDMHPTEKRPAVEVVLTVLHAGGKF
                     DKSSYKVSGGLHGVGVSCVNALAKELIVIVSREGKVHKQRYERGIPVTPLDIIGDTTL
                     TGTEITFVPDEEIFTDTRYFEYDILAKRLRELAYLTKGITITLRDERDPEVKEETFSF
                     LGGITEFVMYLNRNKEPLHEPIAFEKEEDKIIVDIALQYNNSFSENLFSFVNNINTVE
                     GGTHVVGFSTALTRVINEYIEKTMKSDTRLTGDDVKEGLTTIISIKVQNPQFEGQTKT
                     KLGNNEVKGLVSKIVYKELSTYLEEHPAIAKRIIEKGVLAAQAREAARKAKELTRRKS
                     ILSSGSLPGKLADCQERDPTKAELFIVEGDSAGGSSRQGRDRRSQAILPIKGKILNVE
                     KARLDKIFQNNEIITIVSALGTGIGDDFNITKLRYHKIIIMTDADIDGSHIACLLLTF
                     FYRHMRQLIEQGHMYLAMPPLYRVQKGKQKWYVMTDHEMQELLKQIGKEVVIQRYKGL
                     GEMNPEQLWETTLDPESRHMKQVLIEDAIAADEMFSMLMGDDVEPRRDFIFANARFVK
                     NLDI"
     gene            3710..4087
                     /locus_tag="VJJ79_03240"
     CDS             3710..4087
                     /locus_tag="VJJ79_03240"
                     /inference="COORDINATES: protein motif:HMM:NF037434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22762.1"
                     /translation="MEKIVLDTSFLLAVFQLKLDIFSEIARLCDFPYQLYVLDRSLEE
                     LEKLIKTSPLPQKKAAIFAQKIIASGKIQVMQTNETRYVDDILADKTECIIATIDGGL
                     KRRIKAKGGRVITVRQKKYLIFM"
     gene            4092..4652
                     /locus_tag="VJJ79_03245"
     CDS             4092..4652
                     /locus_tag="VJJ79_03245"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004558224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase"
                     /protein_id="HLC22763.1"
                     /translation="MFYTVKVQGHIRVDPNLFGLQPEQALKSSLQQRFDGYISKDVGV
                     VVGVTSIDSIGEGVVISGDGGVYYNTTFQVLSFKPEVGEVVLGKISDITDFGAFLTIG
                     PLDGMIHVSQTMDDYVSFSKSNVLTGKETKKTLKVGDHCRARVIAVSYKDPSNPKIGL
                     TMRQHRLGALSWVEEDLKKEVKKEKK"
     gene            4652..4834
                     /gene="spt4"
                     /locus_tag="VJJ79_03250"
     CDS             4652..4834
                     /gene="spt4"
                     /locus_tag="VJJ79_03250"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018203782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003711 - transcription elongation factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor subunit Spt4"
                     /protein_id="HLC22764.1"
                     /translation="MKKVCKKCRLFVDGQECPVCHGNAFTETWKGRLNILDADKSEIA
                     KKVGILVKGEYAIKVR"
     gene            4836..5174
                     /locus_tag="VJJ79_03255"
     CDS             4836..5174
                     /locus_tag="VJJ79_03255"
                     /inference="COORDINATES: protein motif:HMM:NF013450.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22765.1"
                     /translation="MEIEIIKQKDVPLLNRKRVIGKVQFEGSATPSISVFKDLVASTL
                     NVQKDLIAIRHVYTHFGVSIAKVIVHVYKSREDLLRLERLKKVERKEQEAANVAVSGS
                     KKEAVAAHKE"
     gene            5177..5347
                     /locus_tag="VJJ79_03260"
     CDS             5177..5347
                     /locus_tag="VJJ79_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015504333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S27ae"
                     /protein_id="HLC22766.1"
                     /translation="MAKKKVKNKRSSTKYKKYKDGKAEGFCPKCGPGIFLAQHADRQN
                     CGKCGYTIFTKK"
     gene            complement(5508..5759)
                     /locus_tag="VJJ79_03265"
     CDS             complement(5508..5759)
                     /locus_tag="VJJ79_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22767.1"
                     /translation="MGFIDTLLKFLVAITFDVADFFIGRIPVWGTIFDIAGGFLGLWL
                     WGGIGTLQFAEIIDITDQIDGFIPTLTLAGTISFLTRDT"
     gene            complement(5846..6271)
                     /locus_tag="VJJ79_03270"
     CDS             complement(5846..6271)
                     /locus_tag="VJJ79_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002667220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase-like protein"
                     /protein_id="HLC22768.1"
                     /translation="MIDSTLIIVAVFILVAIVIGYVVGKKITDHAWQDQLPEIREDAI
                     KRSRAVLGGQFSEQLAPYLPDFPYNPTEARFIGKPIDFLVFNGMDEKNISEVIFVEVK
                     SGKSRTNPVEKTLKNAIENNKVRWAEYRVPEEITTKKTV"
     gene            complement(6526..7122)
                     /locus_tag="VJJ79_03275"
     CDS             complement(6526..7122)
                     /locus_tag="VJJ79_03275"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLC22769.1"
                     /translation="MNILAFSDTHLNEKAVKSIIKKSEKADILICAGDISWFGTGLKK
                     ILHMLDSQIQKPIYIIPGNHEEGEPLEEICKPLKNVQCVNRKIKKIDDILFFFWGGGG
                     FARTDPKLEAATNQFQRILKKEDKVVFVTHGPPYQTPLDYLEWAGHVGCKSRKRFITI
                     IRPILHISGHLHEHMHEHAMLGKTILVNPGPDGTLLEL"
     gene            complement(7159..7590)
                     /locus_tag="VJJ79_03280"
     CDS             complement(7159..7590)
                     /locus_tag="VJJ79_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22770.1"
                     /translation="MTRFYQYVVSDGTYARLLRPGETVNEGRILQLVTEDEPEPEYRR
                     ELAQQMDFSKVTFLGEEVCLENYCELGKEQTGPFFPTHTDMDRIISHSLQPKKRLLNQ
                     TPDIITLKFDRKDIFNGHTRTLYALVSISYFANRPFSRQYA"
BASE COUNT         2121 a         1602 c         1681 g         2541 t
ORIGIN      
        1 cgtcgatgtg ataaacaagc tttcgacaat gtcttcttcc tttttctctg cacccttgac
       61 accgacgcct cccctatgct gggttctgta ttcctcaatc ggcagtcgtt tcacgtagcc
      121 agaatttgtc atcgtaacga caacatcttc ttctggaatc aaatcttcga tatcaacatc
      181 ttcctcttca tcgctaatcg ttgtcctgcg ttcatctaga taattgtctc gcagttcttc
      241 tacttctttt tgaataatgt tcaagacttt ttcgtcagat gctaagatcg aatggagatt
      301 gtcaatagtt ttcaagagct ctttgtattc ttcctgaatt ttctctgttt ccaaagaggt
      361 aagtttctga agtttcatgt cgaggattgc ttgtgcttgg atttcagaga gcttgtagtt
      421 cttcataagg aactcgcgtg cagcttctac tgtatttgat gccttgatac cctttacaat
      481 ctggtcgaca ttcattaacg caacacgtaa cccttctacg atatgtgcgc gttcttctgc
      541 acgctgtaag tcaaatcttg ttcttctgac cacgacaatt ttacgatgtg caatatagtg
      601 cgcaagaatt tccttaagta tcatgacttt tggctgtttc ccgtcgagcg caagcatgat
      661 cacaccaaaa gtttcttgta actgagaatg tttgtaaagc tggttcagga ccacatttgg
      721 atcctctcct cgcttgagtt caattacgat actcattcct tttcgatctg actcgtcacg
      781 aatatcagaa ataccctcga caactttttc gttgacaagg tcagcgatgc tttctaagag
      841 cattgacttg ttgaccatat atggaatttc ggttataatt atgcgttgcc ggtcattttt
      901 ttcctctatc tgcgttcgtg cgcgaacaac taatcgtcct tttcctgttt tgtatgcgtt
      961 ccagattcct gaacggccgc agataatacc tcccgttggg aaatccggac cctgtacaaa
     1021 ttggaacaaa acgtcatttt cagcatttgg gtttttaatg aggtggatga ttgcgtttgc
     1081 aatttctttg aggttatgcg ggggaatgtt tgttgccatt cctacagcaa ttcctgtgga
     1141 accgttaaca agtaagtttg gaatatttgc aggaagaacg attggctcct tgtaactgcc
     1201 gtcgaagtta tcttggaagt ctactgtttc cttgttgata tcgcctagca tttcgtcggc
     1261 aatttttgca agctttgctt ctgtgtaacg atatgccgcc ggagaatctc cgtcaattga
     1321 accaaaattt ccttggcctt ttaccagagg atagcgaaga ctccattcct gtgccattcg
     1381 taccattgcg tcatagactg cagcgtcacc atgagggtgg tactttgcaa tcacatctcc
     1441 aacaacagca gcagattttt tgaactttgc accgtgcgtg agccctattt gttgcattgc
     1501 gtatagaatc cgccggtgaa ctggcttgag accgtcacga acgtccggaa gcgcacgacc
     1561 gacaatgacg gacatagaat aatctaagta tgaactcttc atttcttgtt caattggttg
     1621 ttttttgatg cgtgtagttt cttccatttt agatgtctag atttttgaca aaccgtgcat
     1681 ttgcaaagat aaaatccctg cgtggttcga cgtcgtcccc catgagcatt gagaacattt
     1741 cgtctgctgc gattgcatct tcgatgagaa cttgtttcat gtgtcggctc tctggatcaa
     1801 gtgttgtttc ccataactgt tcagggttca tttctcctag tcctttgtag cgctgaatta
     1861 ccacttcttt tcctatttgt tttaacaatt cttgcatctc gtggtctgtc atcacgtacc
     1921 atttttgttt tcccttttgt actctgtata gcggaggcat ggcgaggtac atgtgccctt
     1981 gctcgatgag ttgtctcata tggcgataga aaaatgtcag caagagacag gcgatgtgtg
     2041 aaccgtctat atcagcatct gtcatgatga taatcttgtg atagcgaagc tttgttatgt
     2101 taaaatcgtc accaatccct gttcctagtg cagagacaat agtaattatt tcgttgttct
     2161 ggaaaatttt atctagcctt gctttttcaa catttaatat ttttccttta attggaagaa
     2221 ttgcttgcga tcgcctgtca cggccttgcc tgcttgagcc accggcagaa tctccctcga
     2281 caatgaacag ttctgccttt gtaggatcac gctcctggca atcagctagt tttccaggca
     2341 atgatcctga agagagaata cttttccgac gtgttagctc ctttgctttt cgtgcagctt
     2401 cccgtgcctg tgcagcaagc accccttttt caataattct ttttgcaatt gcaggatgtt
     2461 cttcgaggta tgtactaagc tccttgtaga caatttttga tacaagtccc ttgacctcgt
     2521 tgtttccgag ctttgttttt gtttgccctt caaattgtgg gttttggacc ttgatggaga
     2581 ttatagtcgt gaggccttct ttgacatcgt caccagtgag tcgcgtatcg cttttcatag
     2641 tcttttcaat atactcgttg atcacgcgcg taagtgcggt agaaaatcca acgacgtgcg
     2701 ttccaccttc tactgtatta atgttgttga cgaaagaaaa caaattttca gaaaagctgt
     2761 tgttgtactg tagtgcaatg tcaacgataa tcttgtcttc ctctttctcg aacgctattg
     2821 gctcgtgcaa cggttccttg tttctgttga gatacataac gaactcagtg ataccgccta
     2881 gaaatgagaa tgtttcttcc tttacttccg ggtctctctc gtcgcgaagt gtaatggtga
     2941 tccctttcgt aagatatgca agctctcgta gacgttttgc aagaatgtcg tactcaaagt
     3001 atctggtatc tgtaaaaatt tcttcgtccg gaacaaacgt gatttctgtt cctgtaagag
     3061 tggtgtctcc gatgatgtcg agtggggtaa ccgggatacc acgttcgtat cgttgcttgt
     3121 gtacttttcc ttctcgagag actatgacga tgagttcttt tgcaagcgcg ttgacacaag
     3181 agacgccgac gccgtgtagt cctccagaaa ctttgtagct gctcttgtca aattttccgc
     3241 ccgcgtggag aacagtgaga acgacttcta ctgcaggccg tttttccgtc gggtgcatat
     3301 cgacaggaat tcctcggcca ttatcgcgaa ctgttacaga accatttttg ttaatgataa
     3361 catcaacctt tgtacagaat cctgcaagtg cttcgtcaat agaattgtcg acgacttcgt
     3421 agacgagatg atggagaccg cgaacatttg tgtcccctat gtacattgcc ggtcttgtcc
     3481 ggactgcttc aagacctttc aatacctgaa tattcactgc tttgtagtcg cccattttgt
     3541 gtgagaaagt gctgttttta ttaatggtaa aagaaggcgt taatttatat gcgtttctct
     3601 tctcagaaat gcagaattcg gcagttatac cctttaaaaa ggtattttaa gttttcggga
     3661 aaaatcgcta ttgcaaaggt ttaaaaaggc taataggcgg tattttttta tggaaaagat
     3721 tgtcctagat acgagttttt tgcttgccgt ttttcagctg aaacttgata tattttctga
     3781 aattgcacgt ctctgtgact ttccttacca attgtatgtg cttgatcggt ctctcgagga
     3841 attggaaaaa cttataaaga cttccccact tccacaaaaa aaagccgcta tttttgcgca
     3901 aaagattatt gcttccggca aaattcaggt catgcaaact aatgagacac gatatgttga
     3961 cgatatactt gctgacaaga ctgaatgcat tattgcaact attgatggcg gactcaagcg
     4021 acgtatcaag gcaaaaggtg gtcgagtgat tacagttaga caaaaaaagt acctcatctt
     4081 tatgtaaaaa aatgttttat accgtcaaag ttcaagggca tattcgggtg gatcccaatc
     4141 tctttggtct tcagcctgag caagcgttaa aatcatcact acagcaacgc tttgacggtt
     4201 atatttctaa agatgttgga gttgttgtcg gtgttacttc cattgacagc atcggcgaag
     4261 gtgttgtaat ctcaggcgat ggtggtgtgt actacaacac tacatttcaa gtattaagct
     4321 ttaagccgga agtcggcgaa gttgtcctcg gaaagatttc tgacataact gactttggtg
     4381 cattcttgac aattggtcct cttgatggta tgattcatgt ttctcaaact atggatgatt
     4441 atgtaagctt ttctaagagc aatgttttga ctgggaaaga aaccaaaaaa acattaaaag
     4501 ttggcgacca ttgccgtgcg cgtgtaattg ccgtaagcta taaagatccc tcgaacccaa
     4561 agattgggct tactatgcgg cagcatcgcc ttggtgcact ttcgtgggtt gaagaagact
     4621 tgaagaaaga agtcaaaaag gagaagaaat aatgaaaaaa gtttgtaaga aatgcaggtt
     4681 gtttgttgat gggcaggagt gccctgtgtg ccacggaaac gcattcacag aaacatggaa
     4741 aggtcgactt aatattcttg atgctgataa atctgagatt gcaaaaaaag taggaatatt
     4801 ggtaaaaggc gagtacgcta tcaaggtgcg ataatatgga aattgaaatt atcaaacaaa
     4861 aagatgttcc tttattgaac agaaaacgag tcattgggaa agtgcagttt gaaggtagtg
     4921 caacaccatc tatctcagtt ttcaaggacc ttgttgcgtc gacattgaac gtgcagaaag
     4981 atttgattgc aattcggcac gtgtatacgc attttggtgt ttctatcgcg aaagttattg
     5041 tgcatgtgta caaatcaaga gaggatctct tgcgcctaga aagattaaag aaagtagaac
     5101 gtaaagaaca agaagcagca aatgtagcag tatctggttc gaagaaagaa gcggtagctg
     5161 ctcacaagga ataatcatgg caaagaaaaa agtcaaaaat aaacgttcca gcacaaagta
     5221 caaaaagtac aaggatggaa aagcagaagg gttctgtcca aaatgtggac caggaatttt
     5281 tttagcacag catgcagata gacaaaactg tggcaaatgt ggttatacga tttttactaa
     5341 aaaataattt tttcttttca ttggactatt ttctagcgct ttcgctatat gttcaaaacc
     5401 ctaggaagac actccgaaga gtatctccct ggggaaaaag aggtgatatt cttgggagtg
     5461 tactccctgt atataaaact ttcggtcgtc ttaactgtgg agtagtgcta ggtatccctc
     5521 gtcagaaaac tgatagtgcc agcaagagtc agcgtcggaa taaagccgtc aatctgatcc
     5581 gtaatgtcta taatttctgc aaattgcaat gttcctatgc caccccagag ccagaggcca
     5641 agaaaccctc cggcgatgtc aaagattgtt ccccatacag gaattcttcc gataaagaag
     5701 tctgcaacat caaaagtaat cgcgacgaga aactttaaga gagtatctat aaagcccata
     5761 ttgtttttca atgttttttc ttttcatatg ctttttggtt gagcacgtga aaaatcgtaa
     5821 cgttgcccat agcctttgga ctatcttaca ctgttttttt tgtagtaatt tcttctggaa
     5881 cccgatattc tgcccagcgt actttattat tctctattgc attttttagc gtcttttcaa
     5941 ctggatttgt tcttgatttt ccagatttta cttcgacaaa aataacttcg ctaatatttt
     6001 tttcgtccat tccattgaac acaagaaagt ctatgggttt gccaataaag cgcgcttccg
     6061 ttggattgta gggaaagtct gggaggtatg gtgccaactg ctcgctgaac tgtccaccta
     6121 ggactgccct gcttcttttg attgcatctt ctcgtatctc tggaagctgg tcctgccacg
     6181 catggtcagt tattttcttt ccaacaacat agccgataac gatagcaacg agaatgaata
     6241 ctgcaacaat aattagcgta ctatcaatca tagggcattt aatggaaagg aagtttaaaa
     6301 aattttgtat ccattacagt ggcggtgttg caggaataga aacgttttta tagttttcag
     6361 gtatatatac tagaactatg gtgttagttc gtagacctaa gcttgttgtg gttcacaata
     6421 gaattgttaa gaagaaaaca aggccaaaag taccaaaaaa agtcgttaat aagaaaaaga
     6481 gaaaacgata agcctcctgt actctttctt catttctgta gagagttata gctctagtaa
     6541 tgttccatct ggaccaggat tcactaggat agtcttcccc agcattgcat gctcgtgcat
     6601 atgttcgtgc aaatgaccag agatatgaag gattggtcgt attatggtga taaaacgttt
     6661 tcgagatttg cagccgacgt gtcctgccca ttccaagtaa tctaatggcg tctggtacgg
     6721 aggaccgtgg gtgacaaaca cgactttatc ctcttttttg agtatgcgct gaaactggtt
     6781 ggttgctgct tctagctttg gatctgttcg tgcaaatccg ccgccgcccc agaaaaaaaa
     6841 cagaatgtcg tcaatttttt ttattttccg gttgacacac tggacgtttt ttagcggttt
     6901 acatatttct tctaatggtt ccccttcttc atggtttcca ggaatgatgt agataggttt
     6961 ctggatttga gaatctaaca tgtgtaagat ttttttgagc ccggtaccaa accagctgat
     7021 gtctccggcg caaataagga tgtctgcttt ctcagatttt ttaataattg atttcactgc
     7081 tttttcattc aaatgcgtat cagagaatgc aaggatgttc ataatcacaa aagacacgtc
     7141 cttccttttt aaacattgtt acgcatattg acgagaaaat gggcgattgg cgaagtagga
     7201 aatgctgact agggcgtata acgtgcgagt gtgaccgtta aagatatcct ttctgtcgaa
     7261 tttgagtgtg ataatatctg gggtttgatt aagtaacctt tttttaggtt gcaggctgtg
     7321 cgagatgatt ctatccatgt cagtgtgcgt ggggaaaaat ggtcccgttt gttcttttcc
     7381 tagttcgcag taattttcta agcatacttc ctcgccaaga aatgttactt ttgaaaaatc
     7441 catttgctgg gctaattctc tacggtattc tggttctggc tcatcttctg ttaccaactg
     7501 tagtattcta ccttcgttta ccgtttctcc cgggcgtaat aggcgcgcat aggtgccatc
     7561 tgataccaca tactgataaa atcgtgtcat tctcttttgt ttagaagagt ttccctttaa
     7621 aaagctattc tttggcttat gggacactat tggtttatag tgccgtaaaa agacacatag
     7681 gccatattaa aactaaggtc aaaaaaatca caaacaaatg gtaaggtaga actgttcttt
     7741 ggcacaatca aaagagaaat agccttctgc aacaatgcaa gtcctaagat agctttataa
     7801 gaagcaattt ttctttctac cgtatgaaaa ttcctgagcg acaagtagta gttcgtgcag
     7861 agatgcaaac gaatcctgca tacggaaaaa gcccagagct gcgaacaatg gaggaatcgt
     7921 ttgcatctct gcacgaacta ctact
//
LOCUS       DATDZU010000103         5989 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1721231, whole genome shotgun sequence.
ACCESSION   DATDZU010000103 DATDZU010000000
VERSION     DATDZU010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 5989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5989
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1721231"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            209..1315
                     /locus_tag="VJJ79_03285"
     CDS             209..1315
                     /locus_tag="VJJ79_03285"
                     /inference="COORDINATES: protein motif:HMM:NF014036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HLC22771.1"
                     /translation="MPINAKPEFFKAEKKYHQAETTQEKIAALEEMISTAPAHKGGEN
                     LRADLKQRLAKLRSQLEKSRQAGKGKGAQVTVKREGAAQVILASITNAGKSSLLAALT
                     NAKPTIAAYEYTTKKPEFGIMEYEGGNIQLVEMPPIFYSYAYKGDGPAYFSIMRNADL
                     IIFLVDTTQNEKEQLRVLHSEFEKAQIKLNAEQPKVTIKREGQGGIEIIGKNFFQFDP
                     KDAIKMLTSYGYHNGVVTAHGPVTIEDLADALNESLVYLPLLVVKTKADLTGEGVSAK
                     TGRGLQPLKEKIFKALHLIRVCSKSPGKEKDWPPIALKEGSTVKMLAAVIHKDFLKRF
                     KFARVWGKSAKHSGQKVGLEHNLKDNDVVEFHLK"
     gene            1441..1779
                     /gene="pth2"
                     /locus_tag="VJJ79_03290"
     CDS             1441..1779
                     /gene="pth2"
                     /locus_tag="VJJ79_03290"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016359027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-tRNA hydrolase Pth2"
                     /protein_id="HLC22772.1"
                     /translation="MKEVILVRMDLKMDKGKLAVQCSHAAVEAVLKTNRDKVNDWLRD
                     GGKKVTLKVESLKELQKYKQEAEYIGLKTALITDAGKTFFTKPTMTCLAIGPDDEDKI
                     DRVTGKLKML"
     gene            1867..2685
                     /locus_tag="VJJ79_03295"
     CDS             1867..2685
                     /locus_tag="VJJ79_03295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22773.1"
                     /translation="MEHRTLERIIQLRQMMKGARRNGLLSLGIIAAGLPAQSYAETPS
                     RIHVSGYGEVGSETYWGSYCGDYPTILKSDLNDNGVYEEINTYWCNAEGTRLVKSIEA
                     RDKNADGNPDEITTNEYNIQENLTKQIWDSDGDGKTNSITIYEYDNQGNVSKMTRTVD
                     SNGDGKPDEIKTTEYIPVHIGTNSFPYMFSARETVDRNGDGVLDEITTHEYDAHGKEI
                     KYTIDSDGDGKPNTIFTSEWDAQGHLVGSHIYDILGYPTGKINNDGTLTKENKK"
     gene            complement(2728..2853)
                     /locus_tag="VJJ79_03300"
     tRNA            complement(join(2728..2763,2818..2853))
                     /locus_tag="VJJ79_03300"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2819..2821),aa:Tyr,seq:gta)
     gene            complement(2890..3183)
                     /locus_tag="VJJ79_03305"
     CDS             complement(2890..3183)
                     /locus_tag="VJJ79_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22774.1"
                     /translation="MDYERIANGLGAKAVDLRELTREEAKRYTTIGSPVVLPWGDNLD
                     IFYYGSRMLADYGKSLDDVVGYRILESSEEKAFRDECKNASPIVVRYYGKKEE"
     gene            complement(3216..4667)
                     /locus_tag="VJJ79_03310"
     CDS             complement(3216..4667)
                     /locus_tag="VJJ79_03310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22775.1"
                     /translation="MKIGHLVLLLCLLLVPLAAAGEGIEITETSSRTILQPQETGEYV
                     LHITNLDAKQYQLFIKAEPYVGIPSSYFDYVLIDPNYVVLDGHSSQDVIVTLKVRDDA
                     PRQKRYQSYVTINALNDEAVSETYDLQVFALESTDAVSLYFPDMPETVEPGTDLTFIL
                     TLTNNLQKDLSNVDLYLVSDLFEHQKTIELFEGQEKDIKFTVPVAWDASPGAHTLGVR
                     VYYNNDLSGTASIPITVGENTNVEEHVETDDGLLYTEIRVTKTNTGNTVTSSSFSEDF
                     SLIQGWFVASTLEPMVQDSGDMRWTFTLEPGEEGTLVIKVNYRPLLIALLVLAVLGIM
                     SYYLFTHRVTLKKDVLKTKHGVEGVSDFKVLLHVKNNTNKSLKDVTIVDTLPKIIKPK
                     TSFGTMAPTGIERGDKGVRMMWKISELVSGEERIFSYEVEAQMKVIGEISLPRAIGKY
                     KSGKNRTSNFASNRIILFSGVMEKVKKGLKRSS"
     gene            complement(4768..>5989)
                     /locus_tag="VJJ79_03315"
     CDS             complement(4768..>5989)
                     /locus_tag="VJJ79_03315"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLC22776.1"
                     /translation="AQKIVRLQRDIVALALEDTPIFESAKEKVLLLDEEISQKELDIR
                     STLNKIQELKTRKEHVQHIKLRIENLNSCPTCLQDVSPMHKHTLVDKSSREIHAFEQG
                     IILQEEQRKILEDAQKKMRKEIELLKKKEHEMQLVALKVRQLQEKKEECVLLEKKKIG
                     MEQTIQELTMRIVTLQTQMESFNALEILYPQIRTALDSAEQEYKKVEIEKHRGETTLQ
                     LLMQQVHVLADNIQKKKLVLEKKEHLNQVQFWLSDSFIPMVETIERNIMLKVHSDFNA
                     LFEKWFTLLVDTQTLHIALDEEFTPKILQDGYDTEYTSLSGGEKTAAALAYRLALNQI
                     INSLNAGIKTNDLLILDEPTDGFSPEQLDRLRILMDELRIPQIILVSHEPQIESFVRT
                     VLRFEKAGNETRLI"
BASE COUNT         1737 a         1236 c         1371 g         1645 t
ORIGIN      
        1 ttcttcctcc gtcccatcca ttggctcttt gagagattgg aaccgggatg tgtgcatatt
       61 aatagtaaaa aggaaatggt agcttatttt agggaaatag gattacagaa cattcgtcaa
      121 gagagaacat ttctttttgc agtagcaacc gtaggaataa aatagtctgt gggaagatat
      181 ttaaaagcaa gatattctaa caaggaacat gccaattaac gcaaagccgg aattcttcaa
      241 ggcggaaaag aaatatcacc aagcggaaac aacgcaggaa aaaattgctg ctttggaaga
      301 aatgattagc accgctccag cacataaggg cggagaaaat ctccgtgcgg atctcaagca
      361 acgtcttgca aagcttcgga gccagttaga aaaaagcaga caggcaggaa aaggaaaggg
      421 cgcgcaagtc accgtgaaaa gagaaggtgc agcgcaggtc attctcgcat ccatcaccaa
      481 cgcaggaaaa tcctcgctgt tagcagcgct cacgaacgcc aagccaacaa tagcagcgta
      541 cgagtacacc acaaaaaaac cggaatttgg catcatggag tacgaagggg ggaatattca
      601 gttagtggaa atgccaccaa tcttttacag ctacgcatat aaaggcgacg gcccggcgta
      661 ctttagcatc atgcgcaacg cagacttgat tatttttctg gtcgacacga cacagaacga
      721 aaaagaacag ctcagggtct tgcacagcga gtttgaaaaa gcacagatta agttgaacgc
      781 ggaacagcca aaggtcacga taaaaaggga agggcaaggt ggcatcgaga ttattgggaa
      841 aaactttttt cagtttgatc cgaaggatgc aataaaaatg ctgacatcct acggctacca
      901 taacggggtg gttacggcac acggtccggt cacgatagaa gaccttgcag atgcattgaa
      961 cgaatcgctc gtgtatttac cattactggt ggtcaagaca aaagctgatt taacgggaga
     1021 aggcgtttct gcaaagactg ggcgtggatt gcagccactc aaggaaaaaa tattcaaggc
     1081 actgcatctc attcgcgtgt gctccaagtc gccggggaaa gaaaaagatt ggccacccat
     1141 tgcattaaag gaaggctcga cggtgaaaat gcttgcagcg gtgatacata aagatttttt
     1201 gaaacggttt aagtttgcac gcgtgtgggg gaagagcgca aagcacagtg ggcagaaggt
     1261 gggcttagaa cataacttaa aggataacga tgtagtcgag tttcatttga aataattgct
     1321 ctgggcttta ttctgcaagg atacttctca ttatagggtt aaagaagctt tgcacgcaat
     1381 tgttgaaaga ttttaaacgt cttagaaaac tttatatttc taaagcaagt agaaacctgt
     1441 atgaaagaag tgattcttgt gcggatggac ctcaagatgg acaaagggaa gcttgctgtt
     1501 caatgctcac atgcagctgt tgaagcagtc ctgaaaacca atcgagataa agtgaatgac
     1561 tggttgcggg acggcggaaa gaaagtgaca ctgaaagtag aaagcttgaa agagttgcag
     1621 aagtataagc aggaagcaga atatatcgga ttgaagacag cgttgattac tgatgcagga
     1681 aaaacctttt ttacgaaacc aacaatgaca tgcttggcaa taggcccaga tgacgaagat
     1741 aagatagata gagtgacggg aaaactgaag atgctgtgag agatatcctt cacgctaagc
     1801 tttccacgaa acaggcaaac aaaaagatta taaatcccta aaaagcgaga aaagagggaa
     1861 tcaacgatgg aacaccgaac actcgaaaga ataattcaac tgcgccaaat gatgaaaggt
     1921 gctcgtcgga atggcttgct ctctcttgga attatagctg caggtctccc tgcacagagc
     1981 tatgcggaaa ccccttcacg gatacatgta tctggatatg gtgaggtggg atcagaaaca
     2041 tattggggaa gctattgcgg agattacccc acaatactaa agagtgacct taatgataat
     2101 ggggtttatg aagaaataaa tacctactgg tgtaacgctg aaggaacccg tctggttaaa
     2161 tcgatagaag cacgggataa gaatgctgac gggaatcctg atgaaataac gactaatgag
     2221 tataacatcc aggaaaatct gacaaaacag atttgggatt ctgatgggga tggaaaaacc
     2281 aattcgataa cgatctacga atatgataat caaggaaatg tgtcaaaaat gacgcgaaca
     2341 gtggacagca atggtgatgg aaaacctgat gaaataaaga ccacagagta tatccctgtg
     2401 catatcggta ctaattcctt tccgtatatg ttctcagcaa gggagacagt agatcgtaat
     2461 ggtgatgggg ttcttgatga aataacaact cacgagtatg atgctcatgg aaaggagata
     2521 aaatatacta tagatagtga tggcgatgga aaaccgaata ccatctttac cagcgagtgg
     2581 gatgctcaag gacatttggt agggtcacac atttatgata ttctgggata tccaacagga
     2641 aaaattaata acgatggaac tctgacgaaa gagaataaaa aataaagtca aaaattctaa
     2701 ttttttgtta ttgctttata gaaaatatcc ccacgcccgg actcgaacca ggaacctgtc
     2761 gggttcagct atcctttcat catcctgtgc gtttgcactg tcaaaaggtg aattgatcta
     2821 cagccgactg ctccgccatt aagctacgtg gggtacacga gaagaaattc gagcgattta
     2881 taaggttttt tattcctctt tctttccata ataacgaaca acgatgggag acgcattctt
     2941 gcattcgtcg cgaaatgctt tttcttcact gctctctaaa atgcggtagc cgacaacatc
     3001 atcaagcgac tttccataat cagctaacat tcgtgagcca taataaaaga tatccagatt
     3061 atctccccaa gggagcacaa caggtgaacc aatggtagta tagcgttttg cttcttctct
     3121 tgtgagctcc cgaaggtcca cggctttagc gcctaatcca tttgcaattc tttcatagtc
     3181 catacctttt actcacccct cagagtttat aacaattagg aacttctttt cagccctttc
     3241 ttcacttttt ccataacacc agagaaaaga ataatcctat tagaagcgaa gttcgacgtt
     3301 ctattctttc cggacttata ttttccaatg gctcgtggta atgaaatttc accaatcact
     3361 ttcatctgcg cttctacttc ataagaaaag attcgttctt ccccgcttac taattcagaa
     3421 atcttccaca tcatccgcac gcctttatct cctcgctcaa tgcccgtcgg tgccatggtc
     3481 ccaaaggacg ttttcggctt gataatcttc ggcagtgtat cgacgatagt tacatctttc
     3541 agcgatttat ttgtgttgtt cttcacgtgc aaaagcactt taaagtcaga cacaccttca
     3601 acgccatgct ttgtcttcag cacgtctttc tttaacgtga cacggtgcgt gaacaaataa
     3661 taagacatga tgccgagcac ggcaaggaca agcaatgcaa tgaggagtgg cctgtaattt
     3721 actttgatga ccagcgtccc ttcttcgcca ggttctagcg taaaggtcca gcgcatatcc
     3781 ccgctatctt gcaccattgg ctcaagcgtg gacgcaacaa accagccctg gatcaacgaa
     3841 aagtcttcgc taaatgaaga gctcgtgacg gtatttcccg tgtttgtctt tgtcacgcgg
     3901 atttctgtgt agagaagccc gtcgtccgtt tccacgtgtt cttccacgtt agtattttct
     3961 ccaacagtaa tggggatcga cgccgtgccg ctcaagtcat tattataata cacgcgcacg
     4021 ccaagcgtat gcgccccggg gcttgcatcc catgctacag ggacagtaaa cttgatatct
     4081 ttttcttgtc cttcaaacag ctcgatagtt ttctggtgct caaagagatc gcttacaagg
     4141 tataagtcga cattggaaag gtctttctgg aggttattgg tgagagtaag gataaaggta
     4201 aggtctgttc ccggttccac ggtttccggc atgtctggaa agtacaacga cactgcatct
     4261 gtggattcaa gggcaaagac ctggagatca tacgtttctg agactgcttc atcgttcaga
     4321 gcattaatgg tgacatagct ttggtaccgt ttctgtcgcg gtgcgtcgtc tcgcactttc
     4381 agtgtcacga tgacatcttg ggagctatgc ccgtcgagaa caacgtaatt tggatcaatc
     4441 aacacgtaat caaaataaga gctagggatg ccgacatacg gctcggcttt gataaacagc
     4501 tggtattgtt ttgcgtcaag gttagtgata tgcaggacgt actcgccagt ttcctgtggc
     4561 tgcagaatcg ttcttgaaga agtttcggta atttctatgc cttctcctgc agcagcaaga
     4621 ggaaccagta aaagacagag caacagaacc aagtgaccta ttttcataaa ttctaataac
     4681 gattgtctgg ctttaaatat tttattgttg gagggaagat tgttttccag cgtgtgaatg
     4741 agaatataac cttgttttgc tctataatta aatcaatcgt gtctcgttcc ctgctttctc
     4801 aaaccgtaac acagtacgca caaaactttc aatctgtggc tcgtggctga cgagaataat
     4861 ctggggaatt ctgagctcgt ccatgagaat ccttagccga tcaagctgtt ctggactgaa
     4921 cccgtccgtg ggttcatcta ggataagcag gtcatttgtt ttaatgcctg cgtttaagct
     4981 gttgatgatc tgattcaagg caaggcgata cgcaagcgcc gccgcagttt tttctccgcc
     5041 ggagagtgat gtgtactctg tgtcatagcc gtcttgtaag attttggggg tgaactcttc
     5101 atccaacgca atgtgcagcg tctgtgtgtc gacaagtagt gtgaaccatt tttcaaacaa
     5161 cgcgttgaag tccgaatgta ctttgagcat aatatttctt tctatggttt ccaccatagg
     5221 gataaaggaa tcactgagcc agaactgtac ttggttgagg tgctcttttt tttcaagcac
     5281 aagttttttt ttctgaatat tatcggcgag aacatgaacc tgttgcatga gaagctgcag
     5341 tgttgtttca ccgcgatgct tttcaatctc aacttttttg tattcctgct ctgcagagtc
     5401 tagtgcggtg cgaatctgcg ggtacaagat ttcgagggca ttaaaagatt ccatttgtgt
     5461 ttgcagcgta acgattctca tagtgagttc ttgaattgtt tgttccatcc ctattttttt
     5521 cttttcaagc aacacacatt cttccttttt ctcttgaagt tgccggactt ttagtgcaac
     5581 gagctgcatt tcatgttctt ttttcttgag gagctctatc tcttttcgca tctttttttg
     5641 tgcatcttcc agaatttttc gttgctcttc ctgcaaaata atcccttgct caaaagcatg
     5701 gatctctcgc gaacttttgt cgacgagcgt atgcttgtgc atcggcgaaa catcttgcag
     5761 acaagtaggg cagctattga ggttttctat tcggagcttg atatgctgca cgtgctcttt
     5821 ccttgtcttg agttcctgga tcttgttgag tgtgctgcgg atatctaact ctttttgcga
     5881 aatttcttca tcgagaagaa gaactttttc tttggcactt tcgaaaattg gtgtatcttc
     5941 tagggcaagc gcgactatat ctcgctgtaa tcgaacaatt ttttgtgcg
//
LOCUS       DATDZU010000104         3274 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1559128, whole genome shotgun sequence.
ACCESSION   DATDZU010000104 DATDZU010000000
VERSION     DATDZU010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559128"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="VJJ79_03320"
     CDS             complement(<1..526)
                     /locus_tag="VJJ79_03320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22777.1"
                     /translation="MVYTKGVQAVEIIKEGGEDVLQLNYETIPHIPSIEDNAIVMMDA
                     LDKLAENPSAARLTFAQRRNYQYDYAQTQMLAEIAQIYNYFVRSKRATSLQNLGLTTD
                     SPELLGERLNVVQYLLYTLLKQDPLGAYAELKRVARKETMRLEASKDPLQSQSLVVYT
                     RLLQSILAELDKTKL"
     gene            624..1052
                     /locus_tag="VJJ79_03325"
     CDS             624..1052
                     /locus_tag="VJJ79_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22778.1"
                     /translation="MAEEQMQVDFTRIVNELANRLRILESKQSLLSEKLLVMNQNMVE
                     EYKRVSKDLKAFNVQMKDLEKDLANVKNIVKHLTEETGQFARQSDVKALEKYINIWDP
                     LQFVTEKEVQKLISAALKQHGATKDTNQRSARVPEERNEQ"
     gene            988..1611
                     /locus_tag="VJJ79_03330"
     CDS             988..1611
                     /locus_tag="VJJ79_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22779.1"
                     /translation="MAPQKTPINEALEFLKKGMSNEEISRRLELKGYNIQQISDAINQ
                     AQIKQGVEGELPDLQEAPAEDELDIPFPDQAEDTGAGEGTVAQQQYAMPPQPAMSYEE
                     MQALVEQIIEEKWRDMMRDVGDIALFKVRVGDDLEAVKQEILRTQKRLEDLQVAVLGK
                     VRDYGQSIQSLSGDIKALENVFSRILEPLTSNVKELSRITEDLKKRK"
     gene            complement(1699..2238)
                     /locus_tag="VJJ79_03335"
     CDS             complement(1699..2238)
                     /locus_tag="VJJ79_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22780.1"
                     /translation="MATILDLGLLEYFVPLFVFIFVFVVVFALLEKAQFFGKNVGFNA
                     LIALCLGFLFVIVPEVITLVRLITPWFIILLIFLIFLVMIFLFMGVKAEQVAGVFGGN
                     DVVFWAIFIASLLILGYAFTQVYGEQIQNITAGESGDGEANLVQGIGQILFTPKVLGM
                     IFLMVMAGFVVRFVSASIK"
     gene            complement(2238..2807)
                     /locus_tag="VJJ79_03340"
     CDS             complement(2238..2807)
                     /locus_tag="VJJ79_03340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22781.1"
                     /translation="MVTFQEVIAGLEDVGFYDIALPFILIFTIVFAVLQKLKLFGEGS
                     KKFNAVFALVMAFLVVRTQIVVEIINQFLPQVSLIALIIIVVLLLVGIVMKPEAEGFS
                     GWFGVLATIVVLISLGLVFFNSSEKLGISLPDWLADFVAQDWRLIIGIALFMWFVAWI
                     TSDPSTGTGFGQGVKKFVDSLEKGLRGGR"
     gene            complement(2807..>3274)
                     /locus_tag="VJJ79_03345"
     CDS             complement(2807..>3274)
                     /locus_tag="VJJ79_03345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22782.1"
                     /translation="VFGILEKTKIFGTEKVGDKEYPKKNINAMIAFVVAFFVITAKEI
                     VASIRNALPMVSLILLAIICFLMLVGSFVATKEEFNFLTLFGEGWKLPITIVFILAIV
                     GIFFQSFGWLNPIIDYISGRGQNVFIIFVFVGAVAGIIGWLFSSSGSDGGKKE"
BASE COUNT         1082 a          699 c          682 g          811 t
ORIGIN      
        1 taagttttgt tttgtcaagc tctgcaagaa tactttgcaa taaccgagta tagacgacga
       61 gggactgtga ctgcaacgga tcttttgatg cttccaagcg cattgtttcc tttcgcgcca
      121 cgcgcttgag ctccgcgtat gcacctagag gatcttgctt taacaaagta tacagaagat
      181 actggacaac gttcaatcgc tcacccaata attccggaga atctgtggtc aagccaagat
      241 tttggagcga tgttgcacgt ttgctgcgca cgaaataatt atatatctgt gcaatttctg
      301 caagcatctg cgtttgcgcg taatcgtatt gataatttct tcgctgggca aatgtcagcc
      361 gcgcagcaga cggattttct gcaagcttgt ccagagcatc catcatgacg atggcgttgt
      421 cttcaatgga tggaatatga ggaatggttt cataattcag ctggagaaca tcttcgccgc
      481 cttctttgat aatttctact gcctgcaccc cttttgtata aaccattatt tctctaagag
      541 attggtaggt taaaatatat ttctattaat gacaagaagg tttattaatg agttttccat
      601 taagatataa acgaggagat tctatggcag aagaacaaat gcaagttgat tttacccgga
      661 tagtgaacga gcttgcaaac cggttgcgga tcctggaatc caaacaaagt cttctttctg
      721 aaaaattact tgtgatgaac cagaacatgg ttgaagaata taagagagtt agtaaagatc
      781 tgaaagcgtt taatgtacag atgaaagact tggaaaaaga tttggcaaac gtaaaaaata
      841 ttgttaaaca tctcacggaa gaaacagggc agttcgcacg acaaagcgat gtcaaagctt
      901 tagaaaagta tattaatatc tgggaccctt tacagttcgt tactgaaaaa gaggtgcaga
      961 aacttattag cgctgcacta aaacaacatg gcgccacaaa agacaccaat caacgaagcg
     1021 ctcgagttcc tgaagaaagg aatgagcaat gaagaaataa gtcgccggct tgaactaaaa
     1081 gggtataata ttcaacaaat ttctgatgcg ataaaccaag cgcaaatcaa gcaaggagta
     1141 gagggggagt tgcccgattt acaagaagcg cccgctgaag acgagcttga tatcccattc
     1201 cctgatcaag cagaagatac tggtgcaggt gaaggaaccg ttgcgcaaca gcagtacgcg
     1261 atgccgccac agccagcgat gagctacgaa gaaatgcagg cgcttgtcga gcaaattatc
     1321 gaggagaaat ggcgtgatat gatgcgggac gtgggggata ttgcattatt caaagtgcgc
     1381 gttggtgacg acctcgaagc agtaaagcaa gaaattctca ggacacagaa acgactagaa
     1441 gacttacagg ttgccgtgct gggaaaagtt cgcgattacg ggcaaagcat tcaaagcctc
     1501 agcggcgata tcaaagcgct ggaaaatgtg ttctctagaa ttcttgaacc attaacaagc
     1561 aacgtgaaag aactttctcg gataacggaa gacttgaaga aaaggaaata atgtttattc
     1621 ctcaggagac gttgcagtgg ttattgattc tttcttgata agaataaata atgggtcccc
     1681 agcagaaaaa gaacaatctt atttgataga ggcagaaaca aagcgcacaa caaagccagc
     1741 catgaccatc aagaaaatca ttcctaaaac ttttggcgtg aacagaattt ggccaatacc
     1801 ttgcaccagg tttgcttcac cgtcaccact ttctcctgca gtaatgttct ggatctgttc
     1861 gccgtatacc tgcgtgaatg cgtagccgag gattaggagc gatgcaataa aaattgccca
     1921 gaaaaccaca tcgtttccac caaacacgcc tgcaacttgt tctgccttta cccccataaa
     1981 gaggaaaatc ataactagga aaattaggaa aattagaagg atgataaacc atggcgtaat
     2041 taatcgtacc agtgtaatta cttctggaac aataacaaag agaaacccaa gacatagagc
     2101 gatgagtgca ttaaatccaa cattcttccc aaaaaactgt gctttttcta gtaacgcaaa
     2161 aacaacgaca aagacgaaga taaatacaaa taatgggacg aaatattcaa gtagacctag
     2221 atcaaggatt gttgccatta tcttcctccg cgcagacctt tttccagact atccacaaac
     2281 ttttttaccc cttgaccaaa gcccgttcca gttgagggat ctgaagtaat ccatgcaaca
     2341 aaccacatga aaagagctat ccctataatg aggcgccagt cttgtgcaac aaaatctgcc
     2401 agccagtcag gcaatgaaat gcccaacttt tctgaagagt taaagaacac aagcccgagg
     2461 cttattaaaa caacaatcgt tgcgagcaca ccaaaccatc cgctaaatcc ttctgcctct
     2521 ggcttcataa caattcccac taacaataag acgacgataa tgatcaatgc tattaatgat
     2581 acctgcggca ggaactggtt aataatttca acaactatct gcgtgcgtac gactaagaat
     2641 gccatgacca atgcaaagac ggcattgaac tttttgctcc cttctccaaa gagttttagt
     2701 ttttgcagca ctgcaaagac gatggtaaag atgagaataa acggaagtgc aatatcataa
     2761 aatcccacat cttccaatcc tgctatcact tcttggaacg tcaccattat tctttcttcc
     2821 ctccgtcgct accgctgctg ctaaagagcc agccaataat cccggcaacc gcccccacaa
     2881 aaacgaaaat gataaagacg ttctgtcctc gcccagagat atagtcaatg attggattga
     2941 gccagccgaa ggactggaaa aaaataccta cgattgcgag aataaaaaca atggtgatgg
     3001 gtaacttcca tccttctcca aagagcgtga ggaaattaaa ttcttctttc gtcgcaacga
     3061 aggaaccgac gagcattaaa aagcaaatga tagcgagcaa gatcagagaa accatgggca
     3121 aggcattacg aatagacgca actatttctt ttgccgtgat gacaaaaaac gcaacgacga
     3181 atgcaatcat cgcgttaata ttttttttag gatactcttt gtctcctact ttttccgtgc
     3241 caaaaatctt cgttttttct aaaatgccaa agac
//
LOCUS       DATDZU010000105         3060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_69665, whole genome shotgun sequence.
ACCESSION   DATDZU010000105 DATDZU010000000
VERSION     DATDZU010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 3060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69665"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1303)
                     /locus_tag="VJJ79_03350"
     CDS             complement(<1..1303)
                     /locus_tag="VJJ79_03350"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLC22783.1"
                     /translation="MAQKRHFNLTTWLGISILTIAVVITAGVTWFLYGHTVNLLTENL
                     RERLLSIVTTQVANIDVHDVEALQKEEDWKKPEWKRLVTRLKRSKDHNGDIVFMYVYR
                     RNKDNPEQLEFVADAESINPYANADADSTNDVDANKDGVVEPDGPDYLQWPGQEYPEP
                     PEDAFPAFNGPMTSRDLYEDAWGKVLTGYAPILNEKEDVVAVLAADIRANDFSTITTQ
                     TLIPFIAFILVLIGIILILAYSLIKIWNRQVELLRELDRQKDELMSIVRHQLAAPVTS
                     LRWDTELLLGGDVGKLNAAQKEHVTSMYAIVTNLADLVEMVSEVSRVRLGLTKVDREK
                     IDLAGLFKDIMAVIKPRIVERDIHFTESLPSSFPEAFLDRRLTRMPIENFLTNAVKYT
                     PKKGKVTLTVTVCDGILCCEVTDTGCGIPKAEQKEIFGRLFR"
     gene            complement(1344..>3060)
                     /locus_tag="VJJ79_03355"
     CDS             complement(1344..>3060)
                     /locus_tag="VJJ79_03355"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLC22784.1"
                     /translation="SHFEEIADILLRYESFEVVQDETARTLDLLRHLEENKKYFALRI
                     GGVTSFLPRNQPLYALTCFVLVPALMANEVHFRIPHSMRYFFPELLKLLNLKDFFPNV
                     TVSSRERLEFLSERSALRMNSGTQQTLPVSDVVIFTGTPHHAERLRLVFDKRTLFIAN
                     GAGHNPVVISADADIPKAIEAVLTLQLYNQGQDCAAPNAILIHNHIFEKVLQALHLEL
                     EKVRVGHYRDRSCRVGPISDPEDLVRIQQVLIENSRWIDSHTPGVISARDALMQPTII
                     CKPLKEGGNFNEVFAPIFFLQLYEDDSDLALYFENPHYARNAMYITLYGTSDYIQHIP
                     GKRIGERILHNRSSIIHNTHLHAAGVERGTQPYGGNGYGASSLSIDGKIICKPTLPQR
                     DIYECVIRPLLKKGKLEKRIHTSHQAHTVVTRDIRKILGLKIGTCDEPQTTQIGTCYV
                     DASKIKSNGQRFASFGPEEMFFLLQKPNVKHIASMEPEHLQQVRALRSFLQKEKVVTA
                     DIFRQWLYALPKKVGVSEAENRKRQLCFFQHLYHLLFGQHSGPSLASFLLDVDRLVIC
                     KLLDI"
BASE COUNT          841 a          656 c          679 g          884 t
ORIGIN      
        1 cgcggaagag acggccgaag atttctttct gttctgcttt cgggatgcca cagccagtgt
       61 ccgtcacttc gcaacagagg atgccatcgc agacagtaac ggtgagtgtg acttttcctt
      121 tcttcggcgt gtacttcacc gcattcgtca ggaagttctc aatcggcatg cgtgttaagc
      181 ggcgatcgag gaatgcttcg gggaaggaag aggggagaga ctccgtaaag tgaatgtctc
      241 tctccacgat gcggggttta atgactgcca taatatcttt gaagagtcct gcaagatcaa
      301 tcttctcccg atctaccttt gtgagcccca aacgaacacg cgatacttca gacaccattt
      361 cgacaaggtc agccaaattg gtgacgatgg catacatcga tgtcacatgc tccttttgcg
      421 cagcattgag ctttccgaca tcaccaccca ggagcagttc cgtatcccat cggagagaag
      481 tgacaggtgc tgcaagctgg tgacggacga tgctcatgag ttcatctttt tggcggtcga
      541 gttcgcgcag aagttccact tgtctgttcc agattttaat aaggctgtag gcaagaataa
      601 gaatgattcc tattaaaacc aaaataaatg caataaatgg tatgagcgtt tgagtggtaa
      661 ttgtagaaaa atcattagca cgaatatctg ctgctaatac tgcgacaaca tcttccttct
      721 cgttgaggat gggagcatat cctgtaagaa ccttgcccca tgcgtcctca tagaggtcgc
      781 ggcttgtcat tggaccgtta aatgccggaa acgcatcctc tggtggttca gggtactctt
      841 gtcctggcca ctgtagatag tcaggtccat ctggttccac aactccatct ttattcgcat
      901 caacatcatt tgtggaatcc gcgtctgcat ttgcatacgg gttaatagat tcagcatcag
      961 caacaaattc aagttgttcg gggttatctt tgtttctgcg atatacgtac ataaatacaa
     1021 tatccccatt gtgatccttt gaacgtttta atcgggttac aagtcgcttc cactcgggtt
     1081 ttttccagtc ttcttctttt tggagagctt ccacgtcgtg tacatcgatg ttagctacct
     1141 gtgtcgttac aatggaaagc agacgctctc ggagattttc agtaagcaaa tttactgtgt
     1201 gcccataaag gaaccaggtc acacccgccg tgataaccac tgcgatagtt aagatgctga
     1261 tgcctagcca tgtagtgaga ttgaagtgcc ttttttgtgc catctataca ttataccacg
     1321 ataaacgcca cttttactag accttaaata tctaataact tgcagattac caatctatca
     1381 acatctaaga gaaaggaggc taatgaggga ccggaatgct gcccaaaaag gagatggtag
     1441 agatgttgaa aaaagcacag ttgccttttc cgattttctg cctcagaaac gccaactttt
     1501 tttggaagag cataaagcca ctgccggaag atatctgcag tcacaacttt ttctttttga
     1561 agaaaagatc gcagtgctct tacttgttgc aggtgttctg gttccataga agcaatatgt
     1621 ttgacattag gtttttggag gagaaagaac atttcttccg gaccaaacga ggcgaatcgt
     1681 tggccattag attttatctt ggaggcatcc acgtaacatg tgccaatttg tgtagtctgt
     1741 ggttcatcac atgttcctat ttttaatcca agaatttttc ttatatctct tgtgactaca
     1801 gtgtgcgctt gatgggaagt atgtatgcgc ttttccagtt tccctttctt aagcaatggc
     1861 cgaatcacac actcataaat gtcacgctgt ggaagagtgg gtttgcatat gatttttcca
     1921 tcaatactta aactagaagc tccataacca tttcctccat agggctgtgt gcccctttct
     1981 acccctgcag catgaagatg tgtgttgtgg ataatggatg aacgattgtg caatattctc
     2041 tcccctattc gttttcctgg aatatgctga atatagtcac ttgtcccata aagcgtaata
     2101 tacattgcat ttcgtgcgta gtgagggttt tcaaaataaa gcgccaaatc tgaatcatct
     2161 tcgtataatt gcaagaaaaa aattggtgcg aatacttcat taaagttacc cccttctttc
     2221 aagggtttac aaataattgt gggttgcatc aaggcatcac gagcggagat gacgccagga
     2281 gtatgagaat caatccacct actattttct ataagaactt gttgaattct tacaagatct
     2341 tctgggtcac taatgggtcc gactctgcaa gagcgatcgc gataatgccc cactcgtact
     2401 ttttctagct ctaaatggag agcctgaaga actttctcaa aaatatgatt atgaataagg
     2461 atagcgttag gtgccgcaca atcttgaccc tggttataaa gttgtaatgt cagtacagcc
     2521 tcgatagctt tggggatatc tgcgtcagca ctaatgacca ctggattatg tcctgcaccg
     2581 tttgcaataa aaagtgtgcg tttgtcaaaa acaagacgca agcgctctgc atgatgtggt
     2641 gtacccgtga aaataacaac atcactcact ggtaaagttt gttgagttcc agaattcatg
     2701 cgtagtgctg acctttcact taaaaattcc aaacgctccc tagaagagac agttacattt
     2761 gggaagaaat ctttaagatt gagtaatttt aaaagctccg ggaagaagta tcgcatggag
     2821 tgaggaatcc gaaaatgcac ttcatttgcc attaatgctg gtactaagac aaagcaggtg
     2881 agtgcataga ggggctgatt tcgtgggaga aaagaagtaa caccaccaat acgaagggca
     2941 aagtacttct tgttttcttc gagatgtcgc aagagatcga gcgtacgcgc agtttcatcc
     3001 tggaccacct cgaaactctc atagcgaaga aggatgtctg caatttcttc aaaatgagac
//
LOCUS       DATDZU010000106         2959 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_444091, whole genome shotgun sequence.
ACCESSION   DATDZU010000106 DATDZU010000000
VERSION     DATDZU010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444091"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VJJ79_03360"
     CDS             <1..390
                     /locus_tag="VJJ79_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22785.1"
                     /translation="GDQICTVNLKKMLAFHREHNAMITAFTEDKNISEADTLEVDTEG
                     KVTDFITKFDPSIRGRLVNRGLCIIEPKILELMDKEEFNFENDMYPKIIKRGWKLMAY
                     TSGEDMINIESLEQLKQCEKYLLRKIK"
     gene            387..1331
                     /locus_tag="VJJ79_03365"
     CDS             387..1331
                     /locus_tag="VJJ79_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004462209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLC22786.1"
                     /translation="MRVLVTGACGMMGQHLLPMLKEKEGIEILGTTYRPTTDLRELPQ
                     DVPTQELDVRDYDAVCNVISSFKPDHILHLAAQSYPAVSWKKPQYTVDTNIKGTVNLF
                     EAVKRAKINPIILVACSSAEYGFVDEKDVPIKETHPLLPLHPYGVSKVAQDLLAYQYH
                     KNDGIKTIRARIFNTTGPKKVNDVCSDFTKQAVLIEKGMQKPVIHVGNLHTRRAITDV
                     RDMVRGFMLLMEKGKYGDVYNISGEKAYPIKDILDTVLRITNVQAEVYQDPQLMRPTD
                     EKIIFGDSSKLQEHTGWRQEIPIEQTLKDMINYWRKKL"
     gene            complement(1336..2475)
                     /locus_tag="VJJ79_03370"
     CDS             complement(1336..2475)
                     /locus_tag="VJJ79_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22787.1"
                     /translation="MGKAQKSLSSIRKNIRASQKHKILEKHRHLRDVQRQQQEKDLER
                     KRNELERQRKDRELKRMERQWLQEKQQELEQQLRAIHRKELEHKSEHKKKLALRAKLR
                     EQQVKNIRQFFHHIRKGIVQSEQKVVISVSTAESSLQHAVKKDVIRPVSATFSAYKKW
                     RDAERKRNKEAREQALRLQMREERKKELELKESLRIKHIAAAKDAERQRLDEERQRVD
                     KERKQRAGAREQKHQELEETRKGREQLLIKKQEQEAEEKIKQEALRKERAEQRKEAHV
                     QSEKKKEVMKRVKYLKRLLRDIEKREQEEMGHLLEKMKKAQALKQKAEQVQAHTVEKQ
                     RVGLAEEIIHEQRDIGQLRRQLEKALGEYKEISVKGKLKRFFGKE"
     gene            complement(2597..>2959)
                     /locus_tag="VJJ79_03375"
     CDS             complement(2597..>2959)
                     /locus_tag="VJJ79_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22788.1"
                     /translation="YWDVQDASSEDKISDRAYLNKNIGCLTGYSSSCTCEQVCDAITY
                     GYNTVNDDFSTDAFTLVCYFEDPDPQCSNAKDNIEGEVTIRERGIFAAPEAVSNFFQK
                     IWDFIAKAPPVLHRLLGE"
BASE COUNT          801 a          682 c          571 g          905 t
ORIGIN      
        1 ggcgatcaga tatgtactgt caatcttaaa aaaatgcttg catttcatag ggaacataat
       61 gccatgatta ctgcatttac cgaagataaa aatatttctg aagcagatac gctcgaagta
      121 gatactgagg gaaaagtgac agattttatc acaaaatttg atccttcgat caggggcaga
      181 ctggtgaatc gcggcctgtg cataatcgaa ccgaagattt tagagcttat ggacaaagaa
      241 gaatttaatt ttgaaaatga tatgtatcca aagataataa agagaggatg gaaactcatg
      301 gcatacactt ccggagaaga catgatcaat atagaaagcc tagaacagtt aaaacagtgt
      361 gaaaaatact tgctgaggaa aataaaatga gagtcttagt cactggcgca tgtggcatga
      421 tgggacaaca tctcttgcct atgctcaaag aaaaggaagg aatagagatt cttggaacaa
      481 cttacaggcc aacgacagac ctccgcgaac tcccgcaaga cgtaccaaca caagagcttg
      541 atgtgaggga ttacgacgcc gtatgtaacg tcatttcttc gttcaagccg gaccatatcc
      601 tgcacttggc cgcacaaagt tatcctgccg tctcatggaa aaaaccgcag tacaccgtcg
      661 atacaaatat caaaggcacg gtaaaccttt ttgaagcggt caaacgcgca aaaataaatc
      721 caatcatcct tgtcgcgtgt tcgagcgcag agtacggctt tgtcgacgaa aaagacgtgc
      781 ctatcaagga aacgcatcca ttactcccgt tgcacccata tggcgtcagc aaagtggcac
      841 aggatctcct ggcgtaccag taccacaaga acgacggcat caaaacaatc cgcgcacgaa
      901 tcttcaacac gacgggacca aaaaaagtca acgatgtctg ttcagacttc accaagcagg
      961 cagtgctcat tgaaaaagga atgcaaaagc cagtgatcca cgtcggcaac ctgcacacgc
     1021 gccgcgccat cactgacgta agggacatgg tccgagggtt catgctccta atggaaaaag
     1081 gaaaatatgg agacgtctat aacatttccg gtgaaaaagc ctacccaata aaagatatct
     1141 tagatactgt tctcagaata acaaacgtac aggcagaagt ctatcaggat ccgcagctaa
     1201 tgcgtcccac ggacgaaaag attattttcg gcgattccag caagttacaa gaacatacag
     1261 gctggcggca agagattccg atagaacaaa cattgaaaga tatgatcaac tactggcgca
     1321 aaaagttata atgtatcatt cttttccaaa gaaccgtttc agcttccctt ttactgatat
     1381 ttccttgtac tctcctaacg ctttctcaag ctgccgtcgg agctgtccaa tatcccgttg
     1441 ctcgtgaata atttcttctg ccaaccctac cctttgtttt tcaacagtgt gtgcctgcac
     1501 ctgctctgct ttttgcttca gcgcctgtgc tttcttcatt ttctcaagaa ggtgccccat
     1561 ttcttcctgt tcccgttttt caatgtcacg aagaagcctt ttgaggtact ttactctctt
     1621 catcacttct ttctttttct cgctctgtac atgtgcttct ttccgttgct ctgcacgttc
     1681 ttttcttaac gcttcctgct taattttttc ctctgcttcc tgctcttgtt tttttatgag
     1741 aagctgttct cgtcctttcc ttgtttcttc aagctcttga tgcttctgtt ctcttgctcc
     1801 tgctcgttgc ttacgctctt tatcgacacg ttgccgttct tcgtccagac gctgtcgttc
     1861 tgcatctttt gctgctgcaa tgtgtttgat gcgcaatgat tcttttagtt ctaattcctt
     1921 tttccgttct tctcgcattt gtagccgcaa cgcttgttcc cttgcttctt tatttctttt
     1981 tctttctgca tctcgccatt tcttgtacgc actaaaagta gcggaaacag gacgaatcac
     2041 atcttttttc acggcatgtt gtagagaaga ttctgcggta gagacagaga taacaacttt
     2101 ttgttctgat tgcacaattc ctttccttat atgatgaaag aactgtcgaa tattttttac
     2161 ttgctgttca cgaagctttg cacgcagtgc cagctttttt ttatgctcac ttttatgctc
     2221 gagttctttt ctatgaatcg cgcgcagctg ttgttctagt tcctgctgtt tttcttgtaa
     2281 ccattgtcgt tccattcgtt tcagttcgcg gtcttttcgc tgacgttcta gctcatttcg
     2341 tttacgctca agatctttct cttgctgctg cctttgtacg tctcgtaagt gcctatgttt
     2401 ctcaagaatc ttatgttttt gtgatgcacg aatgttcttt ctaatggaag agagcgattt
     2461 ctgtgctttt cccaagagat tggaaaccgg agtaagaaga taatatgaat tatcaccatc
     2521 ttcttttcgt gcgatatgaa accacctttt taatatagaa atacaagaat atgtctatat
     2581 ttataaaaat tagtatttat tctcccaaaa gcctatggag tacaggagga gcttttgcaa
     2641 tgaagtccca gattttctgg aagaagttgc tcaccgcttc cggcgcagca aagatacccc
     2701 tttctcttat agtaacctcc ccttcaatat tatctttagc gttactgcac tggggatcag
     2761 gatcttcaaa gtaacacaca agagtgaatg catcggtact gaaatcgtca ttgacagtat
     2821 tatagccata ggtaattgca tcacatacct gttcacaagt acaactgcta ctatagcctg
     2881 tcaaacaacc aatattcttg ttcaaataag ctctgtcaga aattttgtcc tcagaactgg
     2941 catcttgtac atcccagta
//
LOCUS       DATDZU010000107         6411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1085003, whole genome shotgun sequence.
ACCESSION   DATDZU010000107 DATDZU010000000
VERSION     DATDZU010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 6411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6411
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085003"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VJJ79_03380"
     CDS             complement(<1..358)
                     /locus_tag="VJJ79_03380"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HLC22789.1"
                     /translation="MNKFLTLRVWILLIALVLAVIAISPNPWAEGIEIVSIDPSSDAA
                     QNGLSVGQILVSIGDQEITSLQDVSDTLVFFAYPAQDVVVKTTDEDVTYSVTNDLGFI
                     VDENLTVIASKVNVTLG"
     gene            complement(355..1245)
                     /locus_tag="VJJ79_03385"
     CDS             complement(355..1245)
                     /locus_tag="VJJ79_03385"
                     /inference="COORDINATES: protein motif:HMM:NF014416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22790.1"
                     /translation="MKDKLKGLYSTHYKKLFFLPLVLLLLGIIILANNYLTNGDIIDK
                     DVSLKGGTIATIYTSQEFSTLQEQLAVQFPGKEFVVQYLTEFSTGVSLGVVVEVSDIE
                     PDALHAALEEITGLALTPENYSVEFIGGSLGESFYQQMLVAILFAFLFMAIVVFVTFR
                     SPVPSFAVVFAAFADMVCTVAFLSLFGMQFSTAGIAAVLLLVGYSIDTDILLTTNMLR
                     RNEAGLFEGVYRSMKTGLTMTAAAFAVMGVGYFVSSSLVIKQMFLIIIVGLCFDVIMT
                     YGMNAGLLFWYLKKKRGSVE"
     gene            1328..3529
                     /locus_tag="VJJ79_03390"
     CDS             1328..3529
                     /locus_tag="VJJ79_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22791.1"
                     /translation="MKHTAFLPLGIVIALIVLLSFQNISFTGKAVDETTEKLTLKLEQ
                     EKVAKGENVQGTLTLKFNETVSPDEQISVTIDGKTTAYKLKEFLAKENYSIEYAETIL
                     KPTNGETKKQLQFTSTGSKYLGFEVPRFANVTALSFDLDANSYQGSYPSSVTIDMGGE
                     GKTDWFYIGEKTSYSKEKLTSEDFDGSAESVAYINDDSTYFCEIINFPQTKHLTINAE
                     YEKKSSVGDISAVVLSFPSGDPELGWAGGGDTCDLPETSGSCTVTFLYPIEGEHLVCV
                     HSTEEGDGENLYELPIDFAETDTAFTCPTSAGSYCKATDFSNFFISAYAGEYDVKMQS
                     KVDVLEWEMFRDALLTGVQNYVGTEPYKGVCKQDLCTVPVNITSATAGSLTVSNFLMH
                     YTYGNIAQDLRNVYDLSLGTANITTLEAQSLENGATIDINLNLFGISEASIGKYTLTI
                     SFMGKNVTETIDVVDESEILDTNTFINLATERYTDLLDTDSNEYQVLLLLDKTQEMKQ
                     ALKELEDLRVEIGFVDDEEILQSSEEIINDLPWDIAYAQTSSKGMKIEPSEIPSGLGD
                     VEALYSMQDAIKVTGTKRTVQVQTYARDVQTYTMIEKKITAEESFSDAAVYEIAPVDF
                     SNILSNARPTESNKNQIVYTISLDEGENEEYFYLMEDDAALDDFKTIIVLSQEETTCG
                     DSICSLPDETIDSCPEDCKVGQRIWLPILGIVLLAVSIILFIRLKPFKKKV"
     gene            complement(3681..4250)
                     /locus_tag="VJJ79_03395"
     CDS             complement(3681..4250)
                     /locus_tag="VJJ79_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22792.1"
                     /translation="MDKLIMVVPRELLLPKEKYFEGYISSEYHDYVRDILTNYQWRRR
                     GDMEFDPAYKQPILYCSIVNRKLGKVFAYQRAKNNEGCTEERIEGKWSWGVGGHVDKD
                     TDGMHTNPLSASLKRELSEEVDIRGLYNEAKVVGYLNFEDAVETFHFSILCIVETSAK
                     EIFPRDKEIHVGKYRSLFELEEMVCLSTV"
     gene            complement(4265..4750)
                     /locus_tag="VJJ79_03400"
     CDS             complement(4265..4750)
                     /locus_tag="VJJ79_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22793.1"
                     /translation="MVFYKLKDTSAAVYSRKLNDIVDLIKYYHVREGEAFINHPSTKS
                     WVKKIPGNSDIELVQYGSFMYHVGDVSLPTTQSEGELPDFEELQVLPDFTVYISPQSV
                     YDFRDFRDAISTKKRGNLFKVQVNHLFGGLTFIPEDVLAAVLDFDLVDILQKADDLRR
                     Q"
     gene            complement(4802..5695)
                     /locus_tag="VJJ79_03405"
     CDS             complement(4802..5695)
                     /locus_tag="VJJ79_03405"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HLC22794.1"
                     /translation="MKYLKTFLRWIFIVLTFGFLIYVLYTSLKELQGYTFNISWDLFL
                     FSYIFLFLHFVLVALAWGLLVRALKKPGVPLLDALRIRTISDFARFLPGKMWYILARV
                     QMCKKYAISSEIIAFSALMETYLNILSTLLVYIVVFFLVAHDPLSTYVFYLFLFLPVP
                     FIFLHPKAFQPFANIIAKIFKRQYTIFTVRYSYLVSLLSIFFVAWIILGVGFFLMTAS
                     VYSVDVSLILPLIGVFAIAWAAGFIIFILPAGLGLREAVLSYLLSFFVPLPIAIIVAL
                     LSRFWLISGEALTALIFRLVK"
     gene            complement(5692..>6411)
                     /locus_tag="VJJ79_03410"
     CDS             complement(5692..>6411)
                     /locus_tag="VJJ79_03410"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 4"
                     /protein_id="HLC22795.1"
                     /translation="CAVMLVGFIDDLLIRRDKEASTGLRQWQKPLLTVIAAVPLMVVN
                     AGETMVTVPFIGVVNLGHLYPLLLIPIGVVGASNMVNLLAGFNGLEAGLGFIYLSNLS
                     IFAYVHGADVAALIGAITCSALFAFLLFNAYPSKIFPGDSLTYLLGGVLASMAILGNI
                     EVAVLIVSIPFLFEFLLKLRGRLQKQSYGMLVDGKVKSLYDTIYSIPHFFTIQGKYTE
                     QQVVALVLAIELLFSFFIWLL"
BASE COUNT         2275 a         1383 c         1211 g         1542 t
ORIGIN      
        1 taccaagagt aacattgacc ttggatgcaa tgacagtcaa attttcatca acaataaagc
       61 caagatcatt agttaccgaa taggtaacat cttcgtcagt tgttttcaca acgacatctt
      121 gtgctggata tgcaaagaat acaagtgtat cagaaacatc ctgaagcgat gttatctcct
      181 ggtcgccaat agaaacaagg atttgcccga cactcagacc attttgtgca gcatcactcg
      241 aaggatcaat ggacacaatt tcaattcctt ctgcccaagg atttggagaa attgcaataa
      301 cagcaagaac gagtgcaatc agcaagatcc aaacacgaag cgtaagaaac ttattcattc
      361 aacactgccc cgctttttct tcaggtacca gaacaaaagg cctgcattca ttccataggt
      421 cataattaca tcaaaacaaa gaccgacgat aataatgaga aacatttgct taatgacgag
      481 ggaggaagaa acaaagtagc caacgcccat tacagcaaac gcggcagcag tcattgttaa
      541 tccagttttc atagaacgat agaccccttc aaacaacccg gcttcatttc ttcggagcat
      601 atttgtcgtc agcaagatat ccgtatcaat ggaatatccc acgagcaaca gaacagcagc
      661 aatgccagca gtagaaaact gcataccaaa taaactgagg aacgcaacgg tacacaccat
      721 atctgcaaac gcggcaaaca cgacggcaaa agaaggaaca ggactacgaa acgtcacaaa
      781 gacgacgatt gccatgaaaa gaaatgcaaa aagaatggca acaagcattt gctggtaaaa
      841 actttccccc aagctcccgc caataaattc gacggaataa ttctcaggcg taagagcaag
      901 cccagtgatt tcttctagcg cagcatggag cgcatcaggt tcaatatcac tcacttcaac
      961 aaccactcct aaagaaacac ctgtgctaaa ctctgtaaga tattggacaa cgaattcctt
     1021 ccctggaaac tgtactgcaa gctgttcttg tagcgtagag aactcttggg aagtataaat
     1081 cgtggcaata gtaccacctt tcaaggaaac gtccttgtca atgatatcac cattagtcag
     1141 ataattattt gcaagaataa tgatccctaa aagaagtaac actaatggaa gaaaaaataa
     1201 ttttttgtag tgtgttgagt acaatccttt cagtttgtct ttcataagac ctttctagaa
     1261 aatggaaggg tttataaaat ttatctgctt tgtacttaaa taaacactct atataaaaag
     1321 gtccctcatg aaacataccg cattcttgcc gctaggcatt gttattgcat tgattgtgct
     1381 tctctcgttt cagaacattt catttaccgg aaaagctgta gacgaaacca cagaaaaact
     1441 aacactgaag ctcgagcaag aaaaagtcgc aaagggcgag aatgtccaag gaacactcac
     1501 actcaaattt aatgaaactg tgagccctga cgaacaaatt tccgtgacta tcgacggaaa
     1561 gacgacagcg tataaattaa aggaatttct tgcaaaagaa aattattcta ttgagtacgc
     1621 agaaacaata ctcaagccga caaatggcga aacaaaaaaa cagttgcagt tcaccagcac
     1681 aggatcaaag taccttggct tcgaagtgcc gagatttgca aacgtcacag cactttcttt
     1741 tgacttagac gcaaattcat accagggttc atatccatca tccgtaacaa tagatatggg
     1801 gggagaagga aaaacggatt ggttctatat aggagaaaaa acaagctaca gcaaagagaa
     1861 gctaacgtca gaagattttg acggcagcgc ggaaagtgtt gcatacatca acgacgacag
     1921 cacgtatttt tgtgagatca taaattttcc gcaaacgaaa catctgacga tcaacgcaga
     1981 atatgaaaag aaaagtagtg tgggagacat ttcagctgtc gtcctctcat tcccttcagg
     2041 cgatccagaa ctgggctggg caggaggcgg cgatacatgt gaccttccag aaacgtcagg
     2101 ttcttgtaca gtgacgttcc tctatcctat agaaggagaa catctcgtgt gcgtccattc
     2161 cacggaagaa ggggacggag aaaatctcta cgaactacca atagattttg cagaaaccga
     2221 cactgcattc acgtgcccga cctctgcagg aagctattgt aaagcaactg atttcagcaa
     2281 ttttttcata agcgcgtatg cgggggaata cgacgtaaaa atgcaaagca aagtagatgt
     2341 tttagaatgg gaaatgtttc gcgatgcact gctcactggc gtacaaaatt atgttggcac
     2401 agaaccatac aaaggagtat gcaaacaaga cctctgtaca gtgccagtaa atataacaag
     2461 tgcaactgca gggtctctaa ctgtttcaaa ctttctcatg cactatacat atggcaatat
     2521 cgcacaagac ctaagaaatg tgtacgatct tagtttagga acagccaata ttacaactct
     2581 agaagcgcag agcttagaaa acggtgcaac tattgacatc aatctcaatc ttttcggaat
     2641 cagtgaagct tccataggaa aatatacact aacgatatca tttatgggta aaaatgtgac
     2701 agaaactatt gacgttgttg acgaatcaga aattcttgac acaaatacgt ttattaatct
     2761 cgcaacagaa cgttatactg acttgctaga tacagattct aatgagtacc aagtacttct
     2821 tctccttgac aaaacacaag aaatgaagca agcattgaaa gaattagagg accttcgtgt
     2881 tgagataggc ttcgtcgatg atgaggaaat cctccagagc agtgaagaga ttatcaatga
     2941 tttaccatgg gacattgcct atgcacagac aagttcaaag ggcatgaaaa tagagccgtc
     3001 agaaattcct tcgggtctcg gtgatgtcga agcactctac tctatgcagg atgcaatcaa
     3061 ggtcaccggc acaaagagaa cagtgcaagt gcaaacatat gcaagagacg ttcaaacgta
     3121 tacgatgatc gaaaaaaaga tcactgcaga agaatcgttc tctgacgcgg cggtctacga
     3181 aatcgcgcca gtagacttca gcaacattct ctccaacgca cgtccaacag aaagtaataa
     3241 aaaccaaata gtatacacca tatcactcga tgaaggcgaa aatgaagagt acttctacct
     3301 catggaagac gatgcagcac tggacgattt taaaacaatc attgtgcttt cacaagaaga
     3361 aacaacgtgt ggggatagca tatgctctct cccagacgaa acaatagatt catgcccaga
     3421 ggattgtaaa gtaggacaaa ggatttggct tccaattctt ggtatcgtcc tgcttgccgt
     3481 aagcattatt ttattcatta gattaaagcc attcaagaaa aaagtataac tgattaatat
     3541 gagtcaagaa aataatattg tggtaccaca tacaaaaaat aaaggaacat tactttaata
     3601 atcttgccga atcccgataa ctcttattat caaagtattg acgcaaagaa tgcaatgctt
     3661 tttttgacca cttctctaca tcataccgtg gagaggcaca ccatctcttc taattcaaac
     3721 aaagagcgat attttcccac atggatttcc ttgtcccgtg gaaaaatttc ttttgcagaa
     3781 gtttccacaa tacagagaat actaaaatga aatgtctcaa cagcatcttc aaaattgaga
     3841 tatccaacaa ctttcgcttc attataaagg ccgcgaatgt ctacttcttc tgatagctcg
     3901 cgtttaaggc ttgcagagag cggattcgta tgcattccat cagtatcttt atctacgtgc
     3961 cctccaactc cccagctcca cttcccttca atccgctctt cggtgcatcc ttcattattt
     4021 ttagcacgtt ggtatgcaaa cacttttcca agcttacggt tcacaataga acaatagaga
     4081 atcggttgct tatatgcagg atcaaattcc atgtcgcccc gtcgccgcca ttgataattt
     4141 gtgagaatgt ctcgaacata atcatgatat tctgaagaaa tatatccctc aaaatatttt
     4201 tccttaggca aaagcaactc ccgaggaacc accataatca atttgtccat tttatccatc
     4261 gtcttcactg tctccgcaaa tcatctgctt tttgtaatat atccacaaga tcaaaatcaa
     4321 gcaccgccgc gagtacatcc tcaggaataa atgtcaaccc accaaaaaga tgatttactt
     4381 gtactttaaa caaattcccg cgttttttag tagaaatagc gtcacgaaaa tcacgaaaat
     4441 cgtaaacaga ttgcggtgaa atatagacag taaaatctgg caatacttgc aactcctcaa
     4501 agtcaggaag ttctccttca ctttgtgtcg taggcaacga gacgtcacca acatgataca
     4561 taaatgaacc atattgaaca agctcgatat cactattccc tggaattttt ttaacccatg
     4621 atttggtact tggatgatta atgaaagcct cgccctctcg tacatgataa tacttaatga
     4681 gatcgacaat atcgttgagc ttgcgggagt aaactgctgc ggaagtgtct tttagtttat
     4741 agaaaaccat agagagagag aaaaaaaata tcagtataaa agtattatta taatcaagta
     4801 tctatttcac caaacgaaaa ataagcgctg tcaacgcttc gccactgatc aaccagaatc
     4861 gggaaagcag ggcgacaata atagcaattg gcaacggaac aaaaaatgaa agcaaataac
     4921 tgagcactgc ctcgcgcaaa ccaagaccag cgggaagaat aaaaataatg aatcctgcag
     4981 cccacgcaat cgcaaacact cctattaaag gaagaatgag ggagacatca acagaataga
     5041 cagatgcagt cattaaaaaa aaacctactc ctaaaataat ccacgcaaca aaaaagattg
     5101 atagcaatga aaccaagtag gaatagcgga cagtaaagat ggtgtactgt ctcttaaaaa
     5161 tcttcgcaat aatgttggca aaaggttgaa acgcttttgg atgcaagaaa atgaaaggaa
     5221 cgggaaggaa caaaaaaaga tagaacacat aagtacttag gggatcatga gcaacgagaa
     5281 aaaaaacaac aatatagacc aaaagtgtac tcagaatatt taagtaagtt tccatcagag
     5341 cactgaacgc aattatttct gatgaaatag catacttctt acacatctgc acacgagcaa
     5401 gaatgtacca cattttccct ggcaagaaac gtgcaaagtc agaaatagtc cgtattcgca
     5461 gtgcgtcaag caatggcaca cctggttttt tcagagcacg gactagcaat ccccacgcaa
     5521 gtgcaaccag aacaaaatgc aggaaaagaa agatgtacga aaacaaaaac aaatcccatg
     5581 aaatattgaa cgtgtatccc tgcaattctt tcaagctcgt atacaataca taaataagaa
     5641 atccaaatgt caggacaata aatatccacc ttaaaaatgt tttcagatat ttcatagcaa
     5701 ccatataaaa aatgagaaca acaactcaat agccaacacc aacgcaacaa cttgttgctc
     5761 agtatatttt ccttgaattg taaagaaatg cggaatggag tagattgtat cataaagtga
     5821 ttttactttg ccatcgacaa gcatcccata gctttgtttc tgcaatcgac cgcgaagctt
     5881 cagcagaaac tcaaacaaaa aaggaataga aacaatcaac actgctactt ctatatttcc
     5941 aagtatcgcc atggatgcaa gcacaccacc taaaagatag gtcaatgaat caccaggaaa
     6001 aatttttgag gggtacgcat taaacaaaag aaacgcaaat agcgctgagc aggtaatcgc
     6061 gccgatcaac gctgcaacgt ctgcgccgtg gacgtacgca aagatactca gattactcaa
     6121 ataaataaag ccaagaccag cctcaagccc attaaatcct gcaagcaggt tgaccatgtt
     6181 tgatgcacca acaacaccaa taggaataag aagcaaggga tacaagtgac caagattcac
     6241 aacgccaata aaaggaacag tgaccatcgt ctctccagca ttgacaacca ttaacggcac
     6301 tgcagcaatc accgtgagca acggtttctg ccactgtcgc aatcccgtgc tcgcttcctt
     6361 gtccctgcgg atgagcaagt catcaatgaa cccgacaagc atgacggcac a
//
LOCUS       DATDZU010000108         2310 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_1729746, whole genome shotgun sequence.
ACCESSION   DATDZU010000108 DATDZU010000000
VERSION     DATDZU010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729746"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VJJ79_03415"
     CDS             complement(<1..476)
                     /locus_tag="VJJ79_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22796.1"
                     /translation="MEKDLSVKWSLLLLVLLFLVVGGLKSYFALSSPTLQDGQAYYTL
                     DQVGAILETGHPRFNDPYSYRGARVFFLPGFYYVLAFFALFIPELIVVKIVPAFLMAS
                     LVFPLYVLSHYFFKQRHVALLTAFAGAFVPVFWSTVNSVSPYTLVLPLLLWVLYAF"
     gene            588..1310
                     /gene="radB"
                     /locus_tag="VJJ79_03420"
     CDS             588..1310
                     /gene="radB"
                     /locus_tag="VJJ79_03420"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair and recombination protein RadB"
                     /protein_id="HLC22797.1"
                     /translation="MLTKKSAEEKVPSGAEIIDQLLKGGYDNDVITTIYGPAGSGKTN
                     LAMLFAIATVKSGKKVLFMDTEGGFSIERLKQLHPNIQEILDNMVFLKPTNFDEQQRA
                     FERLREVIDDHLGAIIIDSIAMLYRLELGKNNDVFDVNRELGRQIMYLTELARKRNIP
                     IFITNQVYRNFEEKNKINMVGGDILKYGSKCLIELQVGHNAKRRAILKKHRSLPSDMM
                     VDFDIQEQGLAASKQDEEFKML"
     gene            complement(1378..1977)
                     /gene="rpsB"
                     /locus_tag="VJJ79_03425"
     CDS             complement(1378..1977)
                     /gene="rpsB"
                     /locus_tag="VJJ79_03425"
                     /inference="COORDINATES: protein motif:HMM:TIGR01012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HLC22798.1"
                     /translation="MAEEEYLVPQDLYLKSGIHIGTKFRTKYMEKFIYKTRPDGLSVL
                     NLQKINERIKLAANLLAQYTPEDILIVSRRENGWKAVKVFANTIKCRTFAGRYPPGIL
                     TNSKLETYTEVKVILVTDSWPDRNAINDAMQVGIPVIALCDTNNQSNCIDLVVPCNNK
                     GKKSLGLFFYILAKEYLKSRGVIKADDELKLTAEDFTEE"
BASE COUNT          724 a          450 c          506 g          630 t
ORIGIN      
        1 aaaaaagcgt acaataccca aagtaagagt ggaagtacaa gggtgtaggg agaaacactg
       61 ttcactgtgc tccaaaaaac gggcacaaat gctcctgcga aagccgtgag aagcgcaaca
      121 tgacgttgtt taaaaaaata atgagacaag acatacaaag gaaaaacaag ggaagccata
      181 agaaaagctg gaacaatttt taccacgatc agttctggga tgaaaagtgc aaaaaatgca
      241 aggacatagt aaaatccggg aagaaaaaaa accctcgcgc ctcgatagct gtaaggatcg
      301 ttaaaccgtg gatgcccggt ttcgagtatg gcacccacct gatcgagagt ataataggcc
      361 tgcccatcct gtaatgtagg acttgacaat gcaaaatagc ttttcaatcc tccaacaaca
      421 agaaacagaa gtaccagtag taaaagactc cacttgacac tgagatcctt ctccatagcg
      481 acaacaacgc ctgccttctt tataaagctt gaggacgatg gatcgcacaa aaaaacggaa
      541 agcccgaaaa agaaaaccat aaaaacagca gatcattctc ataaatgatg ttgacgaaaa
      601 aaagtgcgga ggagaaagtt cccagtggtg cggaaattat tgaccagctg ttaaagggag
      661 gttacgataa tgatgtgatc accacgatct atggtcccgc gggctcggga aaaacgaatc
      721 ttgcaatgct cttcgccatt gcaacagtaa agagtgggaa aaaagtactg tttatggaca
      781 ctgaaggggg attttccatc gagcgattga aacagctcca tcctaacata caggagattc
      841 tcgacaatat ggtttttctc aagccaacga attttgatga gcagcagcgc gcttttgaac
      901 gtttgaggga agtcattgac gaccatttgg gtgccattat tatcgactcg attgcaatgc
      961 tgtaccgtct tgaattggga aaaaataacg acgtgtttga tgtgaatagg gaactgggtc
     1021 ggcaaattat gtatttgaca gagcttgcaa gaaagaggaa catccctatc tttatcacaa
     1081 atcaggtata tcgtaatttt gaagagaaaa acaaaatcaa catggtagga ggggacattt
     1141 tgaagtatgg cagtaaatgc ctgattgaac tgcaggttgg tcataatgca aaacgacgtg
     1201 ccatcctgaa aaaacaccgt tccttaccct cagatatgat ggtggacttt gatatccaag
     1261 agcaaggcct tgctgcgtca aagcaagatg aagaatttaa gatgttgtag cgttcagaaa
     1321 aattatgaaa atgacctgaa aaaataaaga gaaaataaac taaaaaataa aaaagactta
     1381 ttcttccgta aaatcttcgg cagttaattt cagctcgtca tctgccttga taacccctcg
     1441 ggatttcaag tattcttttg ccagtatgta gaaaaacaat cccaatgact tttttccttt
     1501 gttgttgcac ggcacaacta ggtcgataca atttgattgg ttattcgtat cgcacagtgc
     1561 aatgactggg attcctactt gcatcgcatc attgattgca tttctgtcag gccaagaatc
     1621 cgtaacgaga atcactttga cttccgtata cgtctcaagt tttgagtttg ttaaaattcc
     1681 tggaggataa cgtcccgcga aggttctgca cttgatagtg ttggcaaata ctttgactgc
     1741 tttccatcca ttttcccttc ttgaaacgat gagaatgtct tctggagtgt attgcgccag
     1801 taaatttgct gctagtttaa tgcgttcgtt gattttttgc aaattcaaaa cacttaatcc
     1861 atccggtctt gttttgtaga tgaatttttc catgtattta gttctaaatt ttgttccgat
     1921 gtgaattcct gattttaggt agagatcctg cggtacaagg tattcttctt ctgccataac
     1981 gtgttcctcc gttgccgttt ttatgacctc aggcaacgat gtgcgtgcgt tcaagtatcg
     2041 cgcatcgcgt tggtaataaa ggaagaaaag agcaggcctt tataaaagtg cgggtttaga
     2101 aattaattgc tatataaaaa gaataaaaaa aaagaaattt attctcgggg aggttcttct
     2161 ccaacttctt cactggactc ttcgctagat tcttcgccaa aatcttcaga atctccggca
     2221 gcttgttcag gctccgcttc ttgggtttct ccttgagcag tttcctcttg gcgaggtgct
     2281 ggtcttgggg aagtttccac agggccttgt
//
LOCUS       DATDZU010000109        16832 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Nanoarchaeia archaeon isolate SMAG_U8200
            k141_607739, whole genome shotgun sequence.
ACCESSION   DATDZU010000109 DATDZU010000000
VERSION     DATDZU010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962957
            Sequence Read Archive: SRR3989344
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Nanoarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Nanoarchaeia archaeon
            Archaea; Nanoarchaeota; Candidatus Nanoarchaeia.
REFERENCE   1  (bases 1 to 16832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/02/2024 15:46:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 711
            CDSs (total)                      :: 684
            Genes (coding)                    :: 680
            CDSs (with protein)               :: 680
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 25
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 0 of 4
            Pseudo Genes (incomplete)         :: 3 of 4
            Pseudo Genes (internal stop)      :: 1 of 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16832
                     /organism="Candidatus Nanoarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607739"
                     /isolate="SMAG_U8200"
                     /isolation_source="soil"
                     /db_xref="taxon:2910166"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.534762 N 107.782602 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VJJ79_03430"
     CDS             complement(<1..978)
                     /locus_tag="VJJ79_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22799.1"
                     /translation="MRGWYFLMIVTLLLTGCRVEDRQFTTYIPSEGIGDIAVRVTLPD
                     EPRYKEGAPVVVYTPTFFTPENKFGKADWINEQGFILVEFIWPGIQDPQVGVKSDGTF
                     DYGGEDSMQAFRDVILFALNEKKNTNDEFLSDISYVEPLSDNVGLYAFSHPGIVATNV
                     LAFYSEELENVKYFVGRENPTIDKLSSVEVGQFEGDKKILNPYYHYSEDYSSSDLSIN
                     YSTVHYDFSSDTIYFDANGNGKLDSLEYVLGERVPQMFGKRFYSTDLTQALLDNDALN
                     SSTWPEDLATVDDTKEVWPLRETPESYPALAGSDIHVMLVFAETDHVQSA"
     gene            complement(1020..1343)
                     /locus_tag="VJJ79_03435"
     CDS             complement(1020..1343)
                     /locus_tag="VJJ79_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22800.1"
                     /translation="MHNFSRQRAWERHYLDRASKTGAILFWLPGEAEHSCEKVYGAMT
                     RLELGQWMTKYTYDPSIRFCVGSDGLFSELRTIAYDLQVDAPDKEIKKTLEETCVEAL
                     RLARQ"
     gene            complement(1601..4375)
                     /locus_tag="VJJ79_03440"
     CDS             complement(1601..4375)
                     /locus_tag="VJJ79_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22801.1"
                     /translation="MKKRVVLLFFILLLILAACRLIEEVQLEEATVEEGVSEEGVVAE
                     EEAEEETVANEVGAECTVDADCIGLGEDLECTSGYCTAFAGTAGGGSGGGGGGGSSGG
                     DDGAVSDSGAETEVTEGGACTDSDASNEPSTEGTVTYTSTDPLYLNDGELMDSTVEQT
                     EEGTYVYAFTDSCEQSSYGPVLRRYSCGTESYETTIYYCDSCDSPLHCENVNAVTQVD
                     TYTETDDGEDYATAGSVIKSRVLSDAEGSEIFSGVVETLTDTCISSGRHQGELREYFI
                     DGDYWNYVFVDCTDEYGSDSTCEESACVEAAEIISEAPYLGVYTTSVKKSAYSWDDNA
                     TATIDAVEGIGANFYGYGAYDGDTSDPTQGFYWPNFLEFLEETKDTDVEVLAVVQEKH
                     ILSGTSRWGVSSSSSYDAWVDAHIAAAEEFSALAVDYPQFMGFTIDDFGGYPCSATHE
                     IRDADCYTVDDVAAITAAAKISDPDFMFLPTIYYPQFGESLVPGYILGSPYGVQMVNG
                     EYAAMTVTFALDFIPTEANLGFLHYDTNTYDGSYVLPVYKEVWVNGQLLYNDSVNGDE
                     YVEYFNDNIVPYLLEGENEIVLRLYSGGVNFYHDKMWYIWDLSVEGTDFLWSNNETTF
                     AVDASMTTYTNDKGDIVENTGRIVAKTNEEYLIDVDGVVAPYSVDQTFYSLENYTVLL
                     ESTEDALGDKPQIVVLYATFWGKEFDIAVLREQTETAASLTDGVLLWSYPLDLYFPDE
                     GVYSQRDSPDSSYELFAYFPGQQQGIEGWYQTWTSNEQLSGTVEITVKDNWDGTYTPD
                     YFVKKILGLETGELYYNDSITGAEGAETVSIDLGTEPVTFVISVEETDGVGNAPAEVY
                     FHVVDADGNTLDKDAWTFDSGTTYQNRRDVYEELADAFKDIVAVRFAAPKVENGFFVS
                     VVEFLKRLFA"
     gene            4473..4585
                     /locus_tag="VJJ79_03445"
     tRNA            join(4473..4512,4550..4585)
                     /locus_tag="VJJ79_03445"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4509..4511,aa:Ile,seq:tat)
     gene            4639..5001
                     /locus_tag="VJJ79_03450"
     CDS             4639..5001
                     /locus_tag="VJJ79_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22802.1"
                     /translation="MEKKVYVKLSMGYLKGKGEIFLDIFVKDAENQKRIGTYSGKLTP
                     RKDFPHPNPEWKVAWFLEDILKSRPFNLKKTDQYAIVDYEASVNIADFPKELQGDIMK
                     FVHVFETIKKKGMRNILA"
     gene            complement(5002..6192)
                     /locus_tag="VJJ79_03455"
     CDS             complement(5002..6192)
                     /locus_tag="VJJ79_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22803.1"
                     /translation="MKQFIFLLLLLLCLPLASAQGIILYQQDYVRGETVQFFVEGENL
                     FASQISLYNASSYPIASIAPIVQTIRGDSYAYFDLPVNLVAGTYTLKAGPDETTFNVF
                     DGNDAMQVYPPFIVLDKNDDRFQIEIQNILRRETVSVNSSTDAIRPYKLSKTLEAYDS
                     FNLYVDYMYENISQDESLLVYYDNRSYTIPIFYLEAPALEVVPEEEVAPVAEEEVVPE
                     ETSEALVFLVSTKKIETSLAQDVTLKDTVSVKNQLNTTLSNLTIALTGDLADLVVLDE
                     IDVYSLLAGETLTISITVNERGDAMPGAYEGSLVFGNDQYSASLPFSLTVTEEAASEE
                     EQQVEVVTVSGTELEKEGNTTVIIGVVIIVLLVALIVLVVSKLRQRPQKKFKQYIEET
                     KRKK"
     gene            complement(6189..8078)
                     /locus_tag="VJJ79_03460"
     CDS             complement(6189..8078)
                     /locus_tag="VJJ79_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22804.1"
                     /translation="MVILVKKDGVFMTSVALRLALVFLLLGIFSFSVSAANVTAQDGF
                     DWLAEASDNGSYDEDVGESSFALLALNSVGSEISLVHDWLYSAFDDTSFCWPDGGCTV
                     KETSLAVLALDALLDDTYFDSIGGWYADALQDADVSGGWFLEVVTSDSGTCTVSYELD
                     GIVTDIPIDVEEGAFPSCDDSHFLDLDSCLKENLISSHPGITLDVDCNALEGDVVLVL
                     VYKSSSSYYLLGNENSDTADFIVSNGCFARGETGSCDLDSTLYAQWALGEMGNDISTL
                     IYLKEKYDDTDSEQAALLYLITKEEGYLQDLADLQKSDGSFDRDVYTTALAILALKES
                     VNYEAEIDAATSFILEEQDADGHWNNDVSATALALYAAFSDEDVTPVTCDDAEQNGEE
                     EGIDCGGACDACIAAEVISECDIDADCEELYDVGYVCDAGECTLETSIKCAIDDDCAS
                     DEVCLDDTCIEGNCNYQGDKDSDTADCEYPDYNENAYNCPSDCWCGDDVCDDIEADAD
                     SSSDYYCADDCGAAKAECTEDTDCDGGFVCTGGSCEEETVIVEGGSNIVVWVIVILLF
                     IALGIGGYIAYKKGLFDAFLSKFKKGGGKGPQVSVAQVGQPYRPFTSRLQQRSPQQPQ
                     RPFGR"
     gene            8131..8673
                     /locus_tag="VJJ79_03465"
     CDS             8131..8673
                     /locus_tag="VJJ79_03465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22805.1"
                     /translation="MQFFAKGKRSLVYKEGKTIVKVERPESDARNRMENEAYWLKILN
                     AHNIGPTFLGFEKEMLRMEYIDGMPILEWAKEKNKKQKIKILKDLLRQCRVLDTLKVN
                     KYEMHHPLKHALIRKNKIILIDFERCKRTEKPKNVTQVCQFIAQYFNCQEILKKAKKY
                     KETYSEKEFQEIIKCLTNIT"
     gene            8652..9386
                     /locus_tag="VJJ79_03470"
     CDS             8652..9386
                     /locus_tag="VJJ79_03470"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HLC22806.1"
                     /translation="MLDQHYMIDREWLIRVTNIADLNKTDIVLEIGGGTGNLTAYLRK
                     IAKQVYVIEKDKELIKPLEDRFKNFKNVAVICGDATITEFPEFTKCVSNLPYTICEPL
                     MWRLTRTTFELAVFVVPKKFVEKLKGDKPSRLHLLIQNFFSLEIFENIPPAAFDPQPR
                     TMSTIIRLRPKKEGNFFLREFLSQFDKKTKNALRWMLVQSGMTKKEATEQIALKIRPA
                     IQDKRISSLSLEEILEIVKKFSEQEK"
     gene            9422..9751
                     /locus_tag="VJJ79_03475"
     CDS             9422..9751
                     /locus_tag="VJJ79_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007314071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P"
                     /protein_id="HLC22807.1"
                     /translation="MRRSQDKKEQQTIAQERVAILFHEAEKVFSKNPARANRYVALAR
                     KIMMKANLSPEKKFKRKFCKHCNVFLQPGTNVTVRIRNGKVIIYCHNCKKYTRIPIHY
                     KQLTKKP"
     gene            complement(9734..10171)
                     /locus_tag="VJJ79_03480"
     CDS             complement(9734..10171)
                     /locus_tag="VJJ79_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22808.1"
                     /translation="MRDDEWLTQRLEHLWQLLFLDIERKNTVRIRFKGKWKNKFGHIK
                     MLPTKETEIVINSLFKDERVPEGIIDSTIAHELVHYMHGFQSPHERRYKHPHAGGVVT
                     RELRRRGFGHVIVKERAFIRRQWPSLYAQLAGKKTSPLSWFFG"
     gene            complement(10293..10490)
                     /locus_tag="VJJ79_03485"
     CDS             complement(10293..10490)
                     /locus_tag="VJJ79_03485"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011153326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit N"
                     /protein_id="HLC22809.1"
                     /translation="MMIPIRCFSCGRPIAQSWESFKERVAHGDNPKDVMDDLGLERYC
                     CRVQFLGHVDLIDEIAKFKRG"
     gene            complement(10506..10904)
                     /locus_tag="VJJ79_03490"
     CDS             complement(10506..10904)
                     /locus_tag="VJJ79_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016358819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HLC22810.1"
                     /translation="MKSVHVSGKRKRAIARATVRDGTGVVRVNSLLLDAYMPVLARSL
                     VEEPLTIGSDIAKNVNIDVQVIGGGWHSQAEAARLVVAKGLVAYSGSKVLRQKFLEYD
                     RHLLVQDKRRTEPSKPNDSKPRAARQKSYR"
     gene            complement(10901..11323)
                     /gene="rplM"
                     /locus_tag="VJJ79_03495"
     CDS             complement(10901..11323)
                     /gene="rplM"
                     /locus_tag="VJJ79_03495"
                     /inference="COORDINATES: protein motif:HMM:TIGR01077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HLC22811.1"
                     /translation="MKERLIDATGLILGRLCSHVAKHALLGETIAIVNIDKAVITGRR
                     HMVFDRYKMFRAKGTPVQGPFIPRRARELFKRSLKRMLPFKIARGQEALARVKAYKGL
                     PARYAEMSLETLPFADVSKVPTTKYVTLQEVTAFIGGK"
     gene            complement(11320..11664)
                     /locus_tag="VJJ79_03500"
     CDS             complement(11320..11664)
                     /locus_tag="VJJ79_03500"
                     /inference="COORDINATES: protein motif:HMM:NF003079.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18e"
                     /protein_id="HLC22812.1"
                     /translation="MKTNIQTRKLIAALKKAGQGAPLWQRIALELERPTRNMSGVNLV
                     KLDSYLQAGEIAVVPGKVLSVGTLTKKLSVAALNFSDAARAKITAAKGEVLSIEELLQ
                     RNPKGNKVRIFK"
     gene            11748..12554
                     /locus_tag="VJJ79_03505"
     CDS             11748..12554
                     /locus_tag="VJJ79_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22813.1"
                     /translation="MTIVIGYNKPRPTEEDYTQFIEIIVDGLEPYVEKGVSLMAYGSF
                     TRPQDFVPGRSDIDALLLTRDNVVTDKKLLRNVSKVLAYALEKHYVPFQISVSDIATM
                     MDGRFNTYDLTFEEYFREEGKIFAGPDYRNTFAFQLPIIPSQAEVLWGLRKARQQLLF
                     AEYNLRNDYPAFLKGFEKTLQTTSRGSKQLLYMVDGKLRVEKCSALETVAEIFPKVNP
                     EPLRDIKWLYTHPAELDRIYKIPKISLEIMNQSLTFLEEMIREYIALVPK"
     gene            complement(12559..12675)
                     /locus_tag="VJJ79_03510"
     tRNA            complement(join(12559..12620,12626..12675))
                     /locus_tag="VJJ79_03510"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12627..12629),aa:Thr,seq:agt)
     gene            complement(12702..13484)
                     /locus_tag="VJJ79_03515"
     CDS             complement(12702..13484)
                     /locus_tag="VJJ79_03515"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF001988.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit D"
                     /protein_id="HLC22814.1"
                     /translation="MDIELLGKEKGKVRFVAKGTSPAVMNAYRRIVVNDVPAMANDTV
                     EIVENSSALYDEVFAHRLGLVVLKTDLTSYFLKETCKCKGEGCARCTLDLTLEAEGPG
                     IVYAEQLQSKDPAVVPMYPKTPIVKLIEGQRVKVHAKAILGRGREHIKYSPGLLWYQG
                     YPHVKVKNVKNAEGVAAVCPTKVFGVDGGKLKVKKEDACILCMACVDASHKEVDVKGS
                     DTDFIVTLEPWGQLTPEQIVESIADAVHENLDVVSDAIKKLK"
     gene            complement(13488..13910)
                     /locus_tag="VJJ79_03520"
     CDS             complement(13488..13910)
                     /locus_tag="VJJ79_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015848627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HLC22815.1"
                     /translation="MSPSDYAASRQEKLTWGVAHIYSSYNNTIIHITDITGAETVSRA
                     SGGMVVKAHRLESSPTAAMSAAKIAGEVAKEKGINGLHIRVRAPGGHNGPSNTGPGSQ
                     AAIRALSRMGLRIGTIQEVTTMPHDRCRKKGGKRGRRV"
     gene            complement(13907..14494)
                     /locus_tag="VJJ79_03525"
     CDS             complement(13907..14494)
                     /locus_tag="VJJ79_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010867652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HLC22816.1"
                     /translation="MGDPRKQRKKYSGPQHPWNRKRIGEERVLVEDYGLKNKKDLWKV
                     TSKLTHFKKQAKALIVRRGEQAESEKRLFLEKLHRLNLVGATATIDDVLGLAVRDILE
                     RRLQTLVMRKGLAQSAKQARQFIVHGHISVNGQTMTVPSYLVPIAFGDAITFSTRSDL
                     SDPEHPVRQVKKEPAPVVVEQKSQETENVTEVVAE"
     gene            complement(14497..14982)
                     /gene="rpsM"
                     /locus_tag="VJJ79_03530"
     CDS             complement(14497..14982)
                     /gene="rpsM"
                     /locus_tag="VJJ79_03530"
                     /inference="COORDINATES: protein motif:HMM:NF012633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HLC22817.1"
                     /translation="MEKTQTVVKQYVRILSTDIPGAYSLKRGLAQIRGISINLANAIC
                     VRLNLDSSKLLHSHSDAEVKELEIKLKTMKVDSWLMNRQNDYDTGVDRHVLTTDIMFQ
                     RDLDIKRMQKIKSYKGVRHAMGQPVRGQRTKAHFRKGRALGVQKTKAVPGKAAASAKK
                     A"
     gene            complement(15037..15594)
                     /locus_tag="VJJ79_03535"
     CDS             complement(15037..15594)
                     /locus_tag="VJJ79_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011013002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF655 domain-containing protein"
                     /protein_id="HLC22818.1"
                     /translation="MVPAEKEEFAIILDFLPNGYPFDTTPLHRRTAIAQALSKKNFTI
                     LELIPKKGVSLQSQEEVYIGEGKRDKIHHVAGRIPGEKLTQTAHGELEIIVKKLVEAD
                     PQRFVEFFNKAGPLSTRMHQIELLPGIGKKHMWQIIERREEKPFESFEDIKNRVPLIP
                     DPLKVIIKRVLMEINGEDKYKIFVR"
     gene            complement(15603..15944)
                     /locus_tag="VJJ79_03540"
     CDS             complement(15603..15944)
                     /locus_tag="VJJ79_03540"
                     /inference="COORDINATES: protein motif:HMM:NF015812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22819.1"
                     /translation="MGEFNIVEEMSISLAELKEKLDVLMKEGEGKLSYRGEKTKVYID
                     AFVEMKGKEAHALTEKIIGLNIPRLKDRHVVKIVDVMPKDMDSLRLLFSNETITIKEE
                     DLKKILDVINN"
     gene            complement(15944..16237)
                     /locus_tag="VJJ79_03545"
     CDS             complement(15944..16237)
                     /locus_tag="VJJ79_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010885211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21e"
                     /protein_id="HLC22820.1"
                     /translation="MAQRTGGPRRKTRDVLRKNVRDKGKLSISHYLQQFSVSDKVAFV
                     AESAVQKGMHHRRFQGHIGIVVGKQGACYKVKIKDGNLEKFLIVHPVHLRRQA"
     gene            16299..16523
                     /locus_tag="VJJ79_03550"
     CDS             16299..16523
                     /locus_tag="VJJ79_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22821.1"
                     /translation="MTKLKDLVDESNRIAKINLENLTWKSNYFPTIPHLIDASEGNRH
                     IRYPSLEDYDDAHWDGNWDNAVRYLENDER"
     gene            complement(16626..>16832)
                     /locus_tag="VJJ79_03555"
     CDS             complement(16626..>16832)
                     /locus_tag="VJJ79_03555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLC22822.1"
                     /translation="DVLGNKDDAINLTKQLAGVSDGSVSEYEKEKPWYETLSEYTSRS
                     FFSLGQGIGSVLVSVNQEPLVFRA"
BASE COUNT         5053 a         4007 c         3067 g         4705 t
ORIGIN      
        1 tgctgactgt acatgatccg tttcagcaaa gacgagcatc acatgaatgt cagagccagc
       61 aagtgctgga tagctctctg gtgtttcacg taatggccat acctcttttg tgtcatcaac
      121 cgtcgctaaa tcttccggcc atgtagaaga gttaagagca tcgttatcaa gcaatgcctg
      181 cgttaaatcg gtggaataaa accgttttcc aaacatttgc ggcacacgtt caccaagcac
      241 atattccaaa ctatctagct ttccatttcc attagcatca aaataaattg tatcagaact
      301 gaaatcatag tgcactgttg aataatttat agataggtcg ctggaactat aatcctctga
      361 ataatgataa tagggattaa gaattttttt atctccttcg aactgaccga cttcgactga
      421 tgaaagttta tcgatagttg gattttccct tcctacaaaa tatttcacgt tttctaattc
      481 ctcagagtaa aacgcaagaa cgttggtcgc tacaatacct ggatgcgaga atgcgtagag
      541 tccgacattg tcagagagag gttcaacata agatatgtca gaaaggaatt catcgttggt
      601 attcttcttt tcattcagcg caaaaagaat cacgtcgcga aacgcctgca tcgaatcctc
      661 gcccccataa tcaaacgtgc cgtcgctctt cactccaacc tggggatcct gtatgccggg
      721 ccagatgaac tcaacaagaa taaaaccctg ctcattaatc cagtctgctt tcccaaactt
      781 gttttccgga gtaaaaaatg tcggcgtata gacaacaaca ggcgcccctt ctttgtagcg
      841 aggttcatcc ggcaacgtca cacgaacagc aatatctccg ataccttcag aaggaatata
      901 agtagtaaac tgtctgtcct caaccctgca cccagttaaa agcaatgtaa caatcatcag
      961 gaaataccat cccctcatgc gtaagagaaa gaagaagtgg ttaataagat ttctctatct
     1021 tactgtcgtg caagtcgcaa tgcttccacg cacgtctcct ctaatgtttt ctttatttct
     1081 ttatcgggag catcgacttg gagatcatat gcaatggtgc gcaactctga aaataatcca
     1141 tcacttccaa cacagaaacg aatagaagga tcatacgtat attttgtcat ccattgtcca
     1201 agctctagtc tcgtcattgc cccatacact ttttcacacg aatgctctgc ctctccaggc
     1261 aaccaaaaaa gaatcgctcc agttttcgac gcgcgatcta aataatggcg ttcccatgct
     1321 cgttgccgag aaaaattatg cataccttgg acaagatacg ctgcaatgct ctctcgtacc
     1381 catcgtcgtg gagaagcaat ggttatatca ggatcatacg agaataaaat ctctatggcg
     1441 tgatcctacc agttcggtgc acttaagata ggaccagcta aaaaaagaag tggtgtttca
     1501 aaattagcaa cagacgttct tggaataatg actctgccca tactttctaa gaaggaatat
     1561 tagcttaaaa agatttagga gaattagaaa taaactcctg ctacgcaaag agacgtttca
     1621 aaaactccac tacgcttaca aaaaatccat tctctacttt cggcgcagca aagcgcacgg
     1681 caacaatgtc cttaaacgca tctgcaagtt cctcatacac atcacgacga ttctggtacg
     1741 tcgtcccgct gtcaaatgtc cacgcatcct tgtctaacgt attcccatca gcatcgacaa
     1801 catggaagta cacttctgca ggcgcatttc cgacgccatc agtttcttca acagaaataa
     1861 caaacgtcac gggctccgtt ccaagatcga tggaaacagt ctccgcacct tccgcgccag
     1921 tgatgctgtc attgtaatat aactctccag tttctaatcc caatattttc ttgacaaagt
     1981 aatcaggcgt ataggttcca tcccagttgt cttttactgt tatttctacg gttccgctca
     2041 attgttcatt ggatgtccac gtttggtacc atccttcgat tccttgctgc tgtccgggaa
     2101 aatacgcaaa aagttcatac gaagaatcag gagaatcacg ctgcgaatac acgccttcat
     2161 cagggaaata caagtccaat ggatagctcc agagcaagac accatctgtc agtgaagctg
     2221 cagtttctgt ttgttcccga agaacagcaa tatcaaactc tttcccccaa aacgttgcgt
     2281 agagaacaac aatctgcggc ttgtctccta gagcatcttc agttgattca agaagaacag
     2341 tataattctc taaagaataa aatgtttggt cgacactgta aggcgcaacc acaccatcaa
     2401 cgtcaataag atattcttca tttgtttttg caacaattcg gcctgtattt tcaacgatgt
     2461 cacctttatc gtttgtgtac gtagtcatcg acgcatctac tgcaaaagtt gtttcattat
     2521 tactccataa aaaatccgtt ccttcaacag aaagatccca gatataccac atcttatcat
     2581 gatagaaatt gacgccaccg gaatacaacc gcaagacaat ctcattttct ccttctagca
     2641 gatagggaac aatgttatca ttaaagtatt caacatactc atcaccattg acagaatcat
     2701 tgtacagcag ctgaccattc acccacactt ctttatagac gggaagcacg taactgccat
     2761 cataggtatt tgtatcataa tgcaggaatc cgaggttcgc ttctgtcgga ataaaatcca
     2821 gcgcaaaggt aacagtcatt gcagcatact cgccattcac catttgcacg ccgtaaggag
     2881 agccgagaat atatcccgga acaagtgatt ctccaaactg cggataataa atagttggca
     2941 agaacataaa gtctggatca gaaatttttg ctgcggcagt aattgctgca acatcatcca
     3001 ccgtgtaaca gtctgcatca cggatttcat gcgtcgcgct gcaaggatag ccaccaaaat
     3061 cgtcgatagt aaaccccata aattgcggat aatcaacagc aagcgcagag aattcttccg
     3121 ctgctgcaat atgcgcatct acccatgcat catacgagct gctactggag acaccccacc
     3181 gcgaagtgcc tgagagaata tgtttttctt gaacaacagc aagaacttcc acatcagtat
     3241 cttttgtctc ctctaaaaat tctaaaaagt taggccaata aaatccttgt gtcggatcgc
     3301 tcgtatctcc atcgtatgca ccatagccat aaaaatttgc accaatccct tcaacagcgt
     3361 caatagttgc ggtcgcattg tcatcccacg aatacgccga cttttttacg gacgtggtat
     3421 atacaccaag atacggcgct tcagatataa tttctgcagc ttcaacacat gcactttcct
     3481 cgcacgtaga atcggaaccg tactcatcag tacaatcgac aaagacataa ttccaatagt
     3541 caccatcaat aaaatattcc cgcagctctc cctgatgtct gccagaagaa atacaagtat
     3601 cagtaagggt ttcgacaacg ccagaaaaaa tctcagaacc ttccgcatca gagagaactc
     3661 tagacttaat cacagaacct gcagtggcat agtcttctcc gtcatcggtc tccgtatagg
     3721 tatcaacttg cgtaacagcg ttcacatttt cacagtgcaa tggtgagtca caggaatcac
     3781 aataataaat cgtcgtttca tagctctctg tgccacagga ataccttcga agtactggac
     3841 cataagatga ttgttcacag gaatctgtaa acgcatacac atatgttcct tcctctgttt
     3901 gttcaactgt agaatccatg agctcgccat catttaaata aagtgggtca gtactagtat
     3961 atgttaccgt tccttctgta gacggttcgt tactggcatc agaatcagta catgcaccac
     4021 cttctgtcac ctctgtttca gcacctgaat cagaaacagc accgtcatcg cccccagaac
     4081 ttccacctcc tccaccacct ccgctgccgc caccagcagt ccctgcaaat gcagtacagt
     4141 atccagaagt acactctaaa tcttctccaa gcccaataca atccgcatca acggtgcact
     4201 ctgctcctac ttcattagca accgtttcct cttcagcttc ttcttctgca acgacacctt
     4261 cttctgaaac accttcttct acagttgctt cttctaattg aacttcttct atgagacgac
     4321 acgcagctaa aataagcagt aatataaaaa acaatagaac cactctcttt ttcattgtca
     4381 acgaagaaga cgcaaggagt tataaatatt ttgttgcctg agaataaatg ccgaaaccct
     4441 tttaaagctt caaggaatcc atctccccac ggggacccgt agctcagctt ggtttagagc
     4501 gccggtctta tatgaccctt cttcgcttat gaagaagagg ctcgaagcca gccggaagtc
     4561 gtgagttcga atctcaccgg gtccaccttt cttaaagcta gaaaaagata taaagaaaaa
     4621 aacatattta tattaaaaat ggaaaaaaaa gtttacgtca agctctcaat gggatacctc
     4681 aagggcaaag gtgaaatatt tctggacatt tttgttaaag atgctgaaaa ccaaaaaaga
     4741 ataggaacat actcaggaaa gctgacgcca agaaaagatt ttcctcatcc aaaccctgaa
     4801 tggaaagttg catggttctt ggaagatata cttaagagtc gaccctttaa tctcaagaaa
     4861 actgaccaat atgcaattgt cgactacgaa gcctctgtaa atatcgcaga tttcccaaaa
     4921 gagttacagg gagacatcat gaaatttgtg catgtctttg aaacaataaa gaaaaaagga
     4981 atgcgaaaca ttctagccta attatttttt ccgctttgtt tcttcaatat attgcttaaa
     5041 ttttttctgt ggccgttgcc gtagcttcga tacaacaaga acaattaagg caacaagaag
     5101 cacaatgatg acaacaccaa taataacagt agtgttccct tccttctcta gctcagttcc
     5161 cgaaacagtc accacttcta cttgctgctc ttcctcagat gctgcttctt cagtcacggt
     5221 aagagaaaat ggaagactcg cagagtattg atcatttcca aagaccaaag atccttcata
     5281 ggccccaggc atagcatccc ctctttcgtt aacggtaatg gaaatagtta acgtttctcc
     5341 tgccaacaag gaataaacat ctatttcatc gaggaccaca aggtctgcaa ggtctccggt
     5401 caacgcaata gtaaggttcg ataaagttgt attcaactga tttttgacag acacagtatc
     5461 ttttaatgtt acatcctgcg caagggaggt ttctattttc ttagtactca ccaaaaatac
     5521 caatgcttca gaagtttcct cgggaaccac ttcttcctca gcaactggtg caacttcttc
     5581 ctcaggaaca acttccagtg caggtgcttc taaataaaag atgggaatcg tataactcct
     5641 gttgtcatag tacaccaaga gactttcatc ttgactaatg ttttcataca tataatcaac
     5701 atacagatta aaggaatcat aagcctcgag ggttttactt aatttataag ggcggatagc
     5761 atctgtagaa gagttaactg aaacagtttc acgacgaaga atattttgga tctcaatctg
     5821 aaacctatca tcattcttgt ccaaaacaat aaaaggagga tatacctgca tggcatcatt
     5881 gccgtcgaaa acattaaatg tagtctcgtc tggtccagct ttcagcgtat aggtcccagc
     5941 aactaagttt actggcaagt caaaatacgc gtacgagtct ccacgaatag tttgtactat
     6001 cggcgcaatg ctagcaatgg gataagagct tgcattatac aaggatattt gcgacgcaaa
     6061 aagattttct ccctcgacaa aaaactgtac agtttcccca cggacatagt cctgttgata
     6121 caaaataatt ccctgtgcag atgctaatgg caaacacaag agcaataaca gtaagaaaat
     6181 aaattgtttc atcttccaaa gggtcgctgc ggttgttgtg gcgaacgttg ttgcaatcta
     6241 ctcgtgaacg gtcgatatgg ttgtcctact tgtgcaacgc tcacctgcgg cccctttcca
     6301 cccccttttt taaattttga taagaatgca tcaaataatc ctttcttgta ggcaatatac
     6361 ccgccaatac ctaaagcaat gaaaagcaaa atcacaataa cccacacaac aatattactt
     6421 ccgccctcaa caattactgt ttcttcttca caagatccgc cagtacagac aaacccgcca
     6481 tcacaatcag tatcttcagt acattcagct tttgcggctc cacaatcatc agcacaataa
     6541 tagtcagaag aactatcagc atccgcttct atatcatcgc aaacatcatc cccacaccag
     6601 cagtcagatg gacaattgta cgcattctca ttgtaatcag gatactcaca atcagcggta
     6661 tcgctatcct tgtctccttg ataattacaa ttgccttcga tgcaggtatc atccaagcat
     6721 acttcgtcag aggcacaatc atcgtcaatt gcacacttga tgctagtttc taaagtacac
     6781 tctccagcat cacacacata tccaacatca tacaactctt cacagtctgc atcaatgtcg
     6841 cattcagaga taacttctgc tgcaatacag gcatcacaag ctccgccaca gtctattcct
     6901 tcttcctctc cgttttgttc agcatcgtca catgtcacgg gtgtaacatc ttcatcagaa
     6961 aacgctgcat ataacgcgag cgcagtcgca gaaacatcat tattccaatg cccatctgca
     7021 tcctgttctt ctagaatgaa tgacgttgca gcatcaatct ctgcctcata gttaacactc
     7081 tctttcagtg caagtattgc aagagcagtc gtgtacacgt cgcgatcaaa gcttccatca
     7141 cttttctgca agtctgctaa atcctgtaaa tatccttcct ctttagtaat cagatacaga
     7201 agcgcagctt gttcagaatc tgtatcatca tacttctctt ttaggtagat cagcgtgctt
     7261 atatcgttac ccatctcacc aagtgcccac tgcgcataca acgtgctatc aagatcacag
     7321 gaaccagttt ccccacgtgc aaagcatccg ttagaaacga taaaatccgc agtatcagag
     7381 ttttcattgc ctagcaggta atagctcgaa gaagatttat acacgagcac aagaactaca
     7441 tcgccttcga gtgcgttaca gtccacgtca agcgtaatgc caggatggga actaattaaa
     7501 ttttctttga gacagctatc aagatcaagg aaatgcgaat catcacagga tgggaacgca
     7561 ccttcttcga cgtcaatagg aatgtccgta acaattccat cgagttcgta agaaacagta
     7621 caggtaccag agtcagacgt gacgacttcc aagaaccagc cacctgaaac atctgcatcc
     7681 tgcaacgcat cagcatacca tccaccaata gaatcaaaat acgtatcatc cagcaacgca
     7741 tcgagagcaa gcacagcaag cgacgtttcc tttacagtac acccaccatc aggccaacaa
     7801 aaagaagtat catcaaacgc ggaataaagc caatcatgaa caagagaaat ttcagaacca
     7861 acactgttaa gcgcaagaag cgcaaatgaa ctttccccaa catcctcatc ataggaaccg
     7921 ttatccgacg cttctgctag ccagtcaaac ccgtcctgtg cagtaacatt tgcagcactc
     7981 acagagaatg agaaaatacc cagcaacaaa aacactaacg caagacgtag agcaactgac
     8041 gtcataaaaa caccgtcttt ttttactaat ataaccacat gctcctttaa gagcaatcat
     8101 tttataaagt tttctgtaat tgagcacggt atgcaattct ttgcaaaggg aaaacggtcc
     8161 ttggtgtaca aagaaggaaa aactattgtc aaagtcgaaa gaccagaaag tgatgcaaga
     8221 aatagaatgg agaacgaagc gtactggtta aaaattctta acgcgcacaa tataggacca
     8281 acgtttctcg gtttcgaaaa agaaatgcta cgcatggaat acattgacgg catgccgatt
     8341 ttggaatggg cgaaagagaa aaataagaaa caaaaaataa aaatattgaa agatttattg
     8401 cggcagtgtc gcgtactcga tacattgaaa gtaaacaaat acgaaatgca tcacccattg
     8461 aagcacgcac tgatacggaa aaataaaata attctcattg acttcgagcg atgcaagcgc
     8521 acagaaaaac caaagaacgt cacgcaggtc tgccagttta ttgcacagta cttcaattgc
     8581 caagaaattc tcaagaaagc aaagaaatat aaagaaacgt acagcgagaa agagtttcag
     8641 gagattataa aatgcttgac caacattaca tgattgaccg ggaatggttg attcgtgtaa
     8701 cgaacatcgc tgacttgaac aaaacggata tcgtcctcga gatcggcggg ggcacaggaa
     8761 acttgacagc gtatctccga aagattgcca agcaggtcta cgttattgaa aaagataaag
     8821 aattaattaa accgctcgag gatcgcttca aaaatttcaa gaatgtcgca gtcatctgcg
     8881 gcgatgcaac tatcaccgaa tttcctgagt ttaccaagtg cgtatcaaat ctcccctaca
     8941 cgatctgcga accattgatg tggagactga cacgaacaac gtttgagctt gcggtatttg
     9001 ttgtcccaaa aaagtttgtt gaaaagttaa aaggagacaa accgtcgcgg ttgcatcttc
     9061 tcatccaaaa ctttttttca ttagaaatat ttgaaaatat tccgcctgca gcattcgatc
     9121 cccagccacg aactatgtct actattattc gtctaaggcc taaaaaagaa ggaaactttt
     9181 tcctcagaga atttttgtcg cagttcgaca agaaaacaaa gaacgcgctc cgttggatgc
     9241 tcgtgcaatc tggcatgaca aagaaagaag ctacggaaca gattgcgctc aaaatccggc
     9301 cagcaattca ggacaagcgt atcagttctt tatctctcga agaaatcctt gagattgtga
     9361 agaagtttag cgaacaagaa aagtaggaaa atttataaca agaactttct tctgttcagg
     9421 tatgagacga tcgcaagaca agaaagagca acaaacgatt gcacaggaac gtgttgctat
     9481 cctttttcat gaagcagaaa aagtgttctc aaaaaatcct gcacgcgcaa accgctacgt
     9541 tgcgttagca cggaaaatta tgatgaaggc aaacctctct ccagagaaaa aattcaagcg
     9601 aaaattctgc aagcactgca acgtattctt acagccggga acaaacgtaa cagtaagaat
     9661 tagaaacgga aaagtcatta tttattgtca taactgcaaa aaatatacgc gcatccctat
     9721 acactataaa caattaacca aaaaaccatg aaaggggtga cgtttttttt cctgccagct
     9781 gcgcataaag agaaggccac tgccgtcgga taaacgcacg ctctttcact atcacgtgcc
     9841 caaatcctcg ccttcgaagt tcccgtgtca caacgccacc ggcatgcgga tgcttatatc
     9901 gtcgttcatg tggcgactga aagccatgca tgtaatgaac aagctcgtgt gcaatcgttg
     9961 agtcaataat tccttcggga acacgctcgt ccttgaacaa ggaattgatg acgatttccg
    10021 tttctttcgt cggaagcatt ttgatgtggc caaacttatt tttccatttt cctttaaacc
    10081 gtatccgcac tgtattcttt ctttctatgt ctaaaaaaag aagttgccag aggtgttcaa
    10141 ggcgctgcgt tagccattcg tcgtcccgca taagaattct taagaatact cgcttataat
    10201 tatttctaaa gcaaggtgat atgatgaatt acttctaaca caacattgtc ttcaatttta
    10261 ttcaacaggc aaaccattca aaaaaaaggt gtttatcctc gcttgaactt tgcaatctcg
    10321 tcaatcaaat caacgtgccc tagaaattgc actctgcagc agtatcgttc taaacctaaa
    10381 tcatccatga catcttttgg attatcgccg tgagctactc gctctttaaa ggattcccaa
    10441 gattgcgcaa ttgggcgtcc acagctgaaa catctaatag ggatcatcat ttttttgttt
    10501 actccttaac gatatgactt ctgacgtgca gcacgaggct ttgaatcgtt gggttttgaa
    10561 ggttctgtac gtcgtttatc ttgtaccaaa agatgcctat cgtattctaa aaatttctgt
    10621 cgcaatactt tcgagccgct gtacgcaaca agcccctttg caacaacaag acgtgcagcc
    10681 tctgcctgcg agtgccaacc gccaccaatt acttgtacat caatattcac attcttcgca
    10741 atgtcacttc cgatcgtcaa cggttcttct actaaagatc gcgcaagcac aggcatataa
    10801 gcatcaagga gcaatgaatt cacgcgtact actccagttc catcacgtac cgtcgctcgt
    10861 gcaatggcac gttttcgttt tccagaaaca tgcacgcttt tcattttcca cctataaatg
    10921 ccgtcacttc ttgtaatgtc acatattttg ttgtaggaac tttagaaaca tctgcaaatg
    10981 gcaacgtttc caaggacatc tctgcatacc gagctggcaa tcctttataa gcctttactc
    11041 gcgcaagagc ttcctgtcct cgtgcaattt tgaatggcag catacgcttc aaggaacgct
    11101 tgaacaattc tcgtgcgcgc cgcggaataa acggaccttg cacgggcgtt ccctttgcac
    11161 ggaacatttt atatctatca aaaaccatgt gtcttcttcc agtaatcact gctttgtcaa
    11221 tgttcacaat ggcaattgtt tctccgagga gcgcatgctt tgccacatga ctgcaaagac
    11281 gaccaagaat caacccagtt gcatcaatca agcgttcttt catttgaaaa tcctcacctt
    11341 atttccttta ggatttcttt gcaagagttc ttcgatagac aatacttccc ctttggctgc
    11401 agtaatcttc gctcgtgcag cgtcagaaaa attaagtgcg gcaacagaaa gtttttttgt
    11461 gagtgtgcca acggacagaa cctttcctgg aacaacagca atttctcctg cctgaagata
    11521 gctgtccagt ttcacgagat tgactccaga catattccgc gtgggtcttt ccagttctag
    11581 cgcaatacgt tgccagagtg gagcaccctg tccagccttt ttgagtgcag caatcagctt
    11641 ccgtgtttga atattagttt tcatatgata cagtcaggca taaaggaaaa gctaccattt
    11701 atataacttt cgttagcttt atagttcctg agaatttcct gctaaaaatg acaatagtta
    11761 ttggttacaa taaacctcga ccgacagaag aagattatac ccaattcatt gaaattatcg
    11821 tcgatgggct tgaaccttat gttgaaaagg gcgtgagtct catggcctat ggttctttta
    11881 cacgaccaca agactttgtt ccaggaagaa gcgatattga tgcactctta ctgacacggg
    11941 ataatgtggt aacagacaag aaactgcttc gcaatgtatc taaagttctt gcttatgctc
    12001 ttgaaaaaca ttacgtccct ttccaaatat ctgtgtctga tatcgcaaca atgatggatg
    12061 gaaggtttaa cacatatgat ctaacgttcg aagaatactt cagagaagaa gggaaaattt
    12121 tcgctggtcc ggattataga aatacttttg catttcaact tccgataata ccgagtcaag
    12181 cagaggtact ctggggcctt agaaaagcac ggcaacaatt gctttttgca gaatacaatc
    12241 taagaaacga ctaccccgct tttctcaagg gatttgaaaa aacattgcaa acaaccagca
    12301 gaggatcaaa acaacttctc tatatggtag atggtaaact tcgcgtagaa aaatgttctg
    12361 cgcttgaaac ggtagcagag atttttccga aggtgaatcc agaaccgctg cgcgatatca
    12421 aatggcttta tacgcatcct gcagaactcg accgtattta taaaatccct aaaatctccc
    12481 tagaaatcat gaaccaatct ctcacgttct tagaagaaat gatacgagaa tatattgcat
    12541 tggtgccaaa ataataaatg caggagaagg gatttgaacc ctcgcaccca ctaagagaca
    12601 aggccctcaa ccgtatgccc tgtgatacta aggcatcgca ggtttgcgca tttgaccagg
    12661 ctctgccact cctgcataag acgaaaagaa atactctttc cctattttaa ctttttgatt
    12721 gcatcactaa ccacgtcaag gttctcatga actgcatctg caatgctttc aacgatttgc
    12781 tctggagtca actgccccca tggttccagt gtcacaataa aatcagtatc gcttcctttc
    12841 acgtcaactt ccttatggga cgcatcgacg caagccatac atagaataca ggcatcttct
    12901 tttttcactt tcaattttcc accatcgacg ccaaacactt tcgtcggaca cactgcagca
    12961 acgccttctg cattcttcac gttctttact ttcacgtgag ggtatccctg gtaccaaaga
    13021 agacctggtg aatacttgat gtgctctctt cctctgccaa gaatagcttt cgcatgcact
    13081 ttcacgcgct gcccttcaat caatttaact ataggtgttt tgggatacat aggaacgact
    13141 gcaggatctt tcgattgtaa ttgttctgca tagacaatgc caggtccttc agcttcaaga
    13201 gtgagatcga gcgtacaacg agcacatcct tcccctttac acttgcatgt ttctttaaga
    13261 aagtacgatg tgagatctgt tttcaacaca acaagaccaa ggcgatgcgc aaacacttca
    13321 tcatacagcg ctgaagaatt ttcaacaatt tcaacggtat cattcgccat tgcaggaaca
    13381 tcgttcacga cgattcgccg ataagcgttc atcactgctg ggctcgtccc tttggcaaca
    13441 aaccgcactt ttcctttttc ttttcctaag agttctatat ccatgattta gacccgacgt
    13501 cctcgttttc cgcctttctt tcgacagcga tcatgaggca ttgtcgtgac ctcctgaatg
    13561 gttccaatcc gaagccccat cctcgaaagc gcacgaattg ctgcctgact tcctggacct
    13621 gtattactag gaccattatg tcctcctggc gcacgaacac gaatatgcaa cccgttgatt
    13681 cctttttctt ttgcaacttc gcccgcaatt tttgccgcag acattgctgc cgtcggtgaa
    13741 gattccaaac gatgcgcttt gacaaccatt ccaccagagg cacgcgacac ggtttcggct
    13801 ccagtaatat cagttatatg aataatagta ttgttatagg atgaataaat atgggcaacg
    13861 ccccaggtta acttttcctg tcgtgaagca gcatagtcgc ttgggctcat tctgcaacca
    13921 cctctgtgac attttcagtt tcttgagact tttgttcaac aactacaggc gctggttctt
    13981 tttttacttg ccgtacagga tgctcaggat ctgataaatc tgatcgtgta gaaaatgtga
    14041 tagcatcacc aaacgcaatc gggacaagat aagaaggaac agtcattgtt tgcccattca
    14101 cagaaatatg cccatgaaca atgaattgcc ttgcttgttt tgcactctgt gcaagacctt
    14161 tgcgcatgac gagcgtctgc agtcgtcgct caagaatatc tcgaactgcc agcccaagaa
    14221 catcatcaat ggtagctgtt gcgccaacaa ggttcaaacg atggagtttc tctagaaaca
    14281 atcgtttttc gctttccgct tgttctcctc gacgcacaat cagcgctttt gcttgctttt
    14341 taaaatgcgt aagcttggaa gtaactttcc aaagatcttt tttatttttt aatccatagt
    14401 cttcaacgag tactctctct tctccaatcc gttttctatt ccacggatgc tgcggtccgc
    14461 tgtacttttt ccgttgttta cgtggatctc ccatgattat gccttcttag cagatgctgc
    14521 tgccttacct ggaactgctt tcgtcttttg aacaccaaga gcacgccctt tcctaaagtg
    14581 tgcttttgtc ctttgaccac gaacaggctg acccatagcg tgccggacgc ctttgtaact
    14641 ttttattttt tgcatgcgtt taatatcaag gtcacgctgg aacataatgt cagtagtaag
    14701 aacatgccta tccactccag tatcataatc gttctgccta ttcatgagcc aggagtctac
    14761 tttcattgtt tttagtttta tttccaattc tttcacttca gcatcactat gagaatgtaa
    14821 taacttagat gaatcgagat ttagacgcac acagattgca ttggcaaggt ttatactaat
    14881 acctctaatt tgtgcaagac cacgcttcaa cgaataagca cctggaatat ctgtactcaa
    14941 aatacgaaca tactgtttga caactgtttg tgttttttcc attgagataa tccattgatt
    15001 aaaaaacccg gtatttaaaa aggtttttat tttcccctat ctaacaaata ttttatactt
    15061 gtcctccccg ttaatttcca taaggactcg tttaatgatt accttaagtg gatcaggaat
    15121 tagggggaca cgattcttaa tgtcttcaaa actttcgaat ggcttttctt ccctccgttc
    15181 aatgatctgc cacatatgtt tctttcctat accaggcaag agctcaatct ggtgcatacg
    15241 cgtacttagc ggtcctgcct tgttgaaaaa ttccacaaaa cgttgaggat ctgcttcgac
    15301 aagctttttg acaataattt caagctctcc atgtgctgtt tgtgtaagct tttctcctgg
    15361 tatccgacca gcaacatgat gaatcttatc ccgttttcct tcaccgatat atacttcttc
    15421 ctgcgactga agtgaaactc ctttcttcgg aatcaattcc aaaatggtaa aatttttttt
    15481 actaagagct tgggcaatag cagtccttct atgcaaaggt gtggtatcga acggataccc
    15541 atttgggaga aagtccaata taattgcaaa ttcttccttc tctgctggta ccatggtccg
    15601 tgttagttgt tgataacatc taatatcttc ttcaagtctt cttcttttat ggtgattgtc
    15661 tcgttgctga agagaagacg gaggctatcc atatccttcg gcatcacatc aacaatcttg
    15721 acaacgtgcc tgtcttttaa tctgggaata tttaatccaa taattttttc cgttagtgcg
    15781 tgtgcttcct ttcctttcat ttccacaaaa gcatcaatgt acacttttgt tttttctccc
    15841 cgataggaaa gcttcccctc tccctctttc ataagaacat caagcttttc ttttaattct
    15901 gccaagctta tagacatttc ttcaacaatg ttaaattccc ccattatgct tgcctccgca
    15961 agtgtaccgg atgaacaatc aaaaacttct cgaggtttcc gtctttgatt tttactttgt
    16021 aacaagcccc ttgttttcca acaacaatgc caatgtgacc ttgaaaccgt ctatggtgca
    16081 ttcctttttg gactgcagat tcggcaacaa aagcaacttt atcactgaca ctaaactgtt
    16141 gcaaataatg actgatacta agttttcctt tgtccctaac gttctttcta agcacgtctc
    16201 gggtttttct tcgtggtcca cctgttcgtt gtgccattgt gggtttgaag gaatatacaa
    16261 agatttataa actttttgtg ctcactaaaa acaagaaaat gacaaaatta aaagatctcg
    16321 ttgatgaatc aaataggata gccaaaatta atttggaaaa ccttacgtgg aaaagcaact
    16381 attttcctac aatcccccac ctcattgatg caagcgaagg aaacagacat atacgctatc
    16441 cttctctcga ggattatgat gatgcacact gggacggtaa ctgggataac gcggtccgtt
    16501 atttagaaaa tgacgaaaga tagttaacag aaacgcataa tccttattct tctctaccaa
    16561 aattatttca catctaactc aaaacattat aaccatattc taatgagacc gataatctaa
    16621 aaatatcagg ccctaaaaac aagcggctct tggttcacag aaacaagcac agaacctatt
    16681 ccttgtccaa gagaaaagaa agaacgagac gtatattcgc tcagcgtttc gtaccaaggt
    16741 ttttcttttt catactcaga aacagagcca tcagaaaccc cggcaagttg ttttgtcaag
    16801 ttaatagcat cgtctttgtt cccgagaaca tc
//
